Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:54 (1423946): wrapper (7.7.26015): starting
00:02:54 (1423946): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 00:02:54] Arguments: --nthreads 8
[2025-12-02 00:02:54] Threads: 8
[2025-12-02 00:02:54] Checking for CVMFS
[2025-12-02 00:02:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 00:02:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 00:02:56] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 00:02:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 00:02:57] 2.13.2.0 1657905 38453 237060 153544 0 513 40602173 40960000 32615 16776704 0 446128082 99.694 351193735 48315 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-02 00:02:57] CVMFS is ok
[2025-12-02 00:02:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 00:02:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 00:02:57] Further information can be found at the LHC@home message board.
[2025-12-02 00:02:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 00:02:57] Checking for apptainer binary...
[2025-12-02 00:02:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 00:02:57] Running /usr/bin/apptainer --version
[2025-12-02 00:02:58] apptainer version 1.4.4-1.el9
[2025-12-02 00:02:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 00:02:59] c-208-39.aglt2.org
[2025-12-02 00:02:59] apptainer works
[2025-12-02 00:02:59] Set ATHENA_PROC_NUMBER=8
[2025-12-02 00:02:59] Set ATHENA_CORE_NUMBER=8
[2025-12-02 00:02:59] Starting ATLAS job with PandaID=6897995331
[2025-12-02 00:02:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 16:14:23]  *** The last 200 lines of the pilot log: ***
[2025-12-02 16:14:23] 2025-12-02 21:13:33,686 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 16:14:23] 2025-12-02 21:13:33,695 | INFO     | fitting pss+swap vs Time
[2025-12-02 16:14:23] 2025-12-02 21:13:33,696 | INFO     | sum of square deviations: 264983388918.6532
[2025-12-02 16:14:23] 2025-12-02 21:13:33,706 | INFO     | sum of deviations: 2024938007033.7825
[2025-12-02 16:14:23] 2025-12-02 21:13:33,707 | INFO     | mean x: 1764681028.906217
[2025-12-02 16:14:23] 2025-12-02 21:13:33,707 | INFO     | mean y: 3332322.05374078
[2025-12-02 16:14:23] 2025-12-02 21:13:33,707 | INFO     | intersect: -13481926887.234516
[2025-12-02 16:14:23] 2025-12-02 21:13:33,707 | INFO     | chi2: 12.537370506209633
[2025-12-02 16:14:23] 2025-12-02 21:13:33,708 | INFO     | sum of square deviations: 260817342636.19928
[2025-12-02 16:14:23] 2025-12-02 21:13:33,719 | INFO     | sum of deviations: 2414473148912.433
[2025-12-02 16:14:23] 2025-12-02 21:13:33,719 | INFO     | mean x: 1764680876.42161
[2025-12-02 16:14:23] 2025-12-02 21:13:33,720 | INFO     | mean y: 3346582.1747881356
[2025-12-02 16:14:23] 2025-12-02 21:13:33,720 | INFO     | intersect: -16332892984.77139
[2025-12-02 16:14:23] 2025-12-02 21:13:33,720 | INFO     | chi2: 9.106367141626974
[2025-12-02 16:14:23] 2025-12-02 21:13:33,720 | INFO     | current chi2=9.106367141626974 (change=27.366211781675574 %)
[2025-12-02 16:14:23] 2025-12-02 21:13:33,721 | INFO     | sum of square deviations: 256694859764.50067
[2025-12-02 16:14:23] 2025-12-02 21:13:33,733 | INFO     | sum of deviations: 2629500468665.841
[2025-12-02 16:14:23] 2025-12-02 21:13:33,733 | INFO     | mean x: 1764680723.9307773
[2025-12-02 16:14:23] 2025-12-02 21:13:33,733 | INFO     | mean y: 3354514.3514376995
[2025-12-02 16:14:23] 2025-12-02 21:13:33,733 | INFO     | intersect: -18073473338.29289
[2025-12-02 16:14:23] 2025-12-02 21:13:33,734 | INFO     | chi2: 7.14692209986943
[2025-12-02 16:14:23] 2025-12-02 21:13:33,734 | INFO     | current chi2=7.14692209986943 (change=21.517307739554443 %)
[2025-12-02 16:14:23] 2025-12-02 21:13:33,734 | INFO     | right removable region: 938
[2025-12-02 16:14:23] 2025-12-02 21:13:33,734 | INFO     | sum of square deviations: 260815660256.1992
[2025-12-02 16:14:23] 2025-12-02 21:13:33,744 | INFO     | sum of deviations: 1577195694482.272
[2025-12-02 16:14:23] 2025-12-02 21:13:33,744 | INFO     | mean x: 1764681181.42161
[2025-12-02 16:14:23] 2025-12-02 21:13:33,744 | INFO     | mean y: 3348703.3887711866
[2025-12-02 16:14:23] 2025-12-02 21:13:33,744 | INFO     | intersect: -10667972024.584652
[2025-12-02 16:14:23] 2025-12-02 21:13:33,745 | INFO     | chi2: 8.184142392012303
[2025-12-02 16:14:23] 2025-12-02 21:13:33,745 | INFO     | current chi2=8.184142392012303 (change=34.72201856075977 %)
[2025-12-02 16:14:23] 2025-12-02 21:13:33,746 | INFO     | sum of square deviations: 256691839393.2921
[2025-12-02 16:14:23] 2025-12-02 21:13:33,756 | INFO     | sum of deviations: 1238308999833.7156
[2025-12-02 16:14:23] 2025-12-02 21:13:33,756 | INFO     | mean x: 1764681333.9371672
[2025-12-02 16:14:23] 2025-12-02 21:13:33,756 | INFO     | mean y: 3361229.4866879657
[2025-12-02 16:14:23] 2025-12-02 21:13:33,756 | INFO     | intersect: -8509651037.743436
[2025-12-02 16:14:23] 2025-12-02 21:13:33,756 | INFO     | chi2: 5.7508387170504545
[2025-12-02 16:14:23] 2025-12-02 21:13:33,757 | INFO     | current chi2=5.7508387170504545 (change=29.731932295517556 %)
[2025-12-02 16:14:23] 2025-12-02 21:13:33,757 | INFO     | sum of square deviations: 252612322876.26135
[2025-12-02 16:14:23] 2025-12-02 21:13:33,767 | INFO     | sum of deviations: 1153059752865.0986
[2025-12-02 16:14:23] 2025-12-02 21:13:33,767 | INFO     | mean x: 1764681486.4411135
[2025-12-02 16:14:23] 2025-12-02 21:13:33,767 | INFO     | mean y: 3364415.7473233403
[2025-12-02 16:14:23] 2025-12-02 21:13:33,767 | INFO     | intersect: -8051599710.599417
[2025-12-02 16:14:23] 2025-12-02 21:13:33,768 | INFO     | chi2: 5.663628912591197
[2025-12-02 16:14:23] 2025-12-02 21:13:33,768 | INFO     | current chi2=5.663628912591197 (change=1.5164710531820667 %)
[2025-12-02 16:14:23] 2025-12-02 21:13:33,768 | INFO     | left removable region: 30
[2025-12-02 16:14:23] 2025-12-02 21:13:33,768 | INFO     | sum of square deviations: 232095230948.86685
[2025-12-02 16:14:23] 2025-12-02 21:13:33,778 | INFO     | sum of deviations: 1582421484262.9412
[2025-12-02 16:14:23] 2025-12-02 21:13:33,778 | INFO     | mean x: 1764681608.4878855
[2025-12-02 16:14:23] 2025-12-02 21:13:33,778 | INFO     | mean y: 3393794.131057269
[2025-12-02 16:14:23] 2025-12-02 21:13:33,778 | INFO     | intersect: -12028176517.497303
[2025-12-02 16:14:23] 2025-12-02 21:13:33,779 | INFO     | chi2: 0.07746566334716523
[2025-12-02 16:14:23] 2025-12-02 21:13:33,779 | INFO     | current memory leak: 6.82 B/s (using 908 data points, chi2=0.08)
[2025-12-02 16:14:23] 2025-12-02 21:13:33,780 | INFO     | could have reported an average CPU frequency of 3747 MHz (35 samples)
[2025-12-02 16:14:23] 2025-12-02 21:13:33,780 | INFO     | ..............................
[2025-12-02 16:14:23] 2025-12-02 21:13:33,780 | INFO     | . Timing measurements:
[2025-12-02 16:14:23] 2025-12-02 21:13:33,780 | INFO     | . get job = 0 s
[2025-12-02 16:14:23] 2025-12-02 21:13:33,780 | INFO     | . initial setup = 4 s
[2025-12-02 16:14:23] 2025-12-02 21:13:33,780 | INFO     | . payload setup = 110 s
[2025-12-02 16:14:23] 2025-12-02 21:13:33,780 | INFO     | . stage-in = 0 s
[2025-12-02 16:14:23] 2025-12-02 21:13:33,780 | INFO     | . payload execution = 57923 s
[2025-12-02 16:14:23] 2025-12-02 21:13:33,780 | INFO     | . stage-out = 3 s
[2025-12-02 16:14:23] 2025-12-02 21:13:33,780 | INFO     | . log creation = 1 s
[2025-12-02 16:14:23] 2025-12-02 21:13:33,780 | INFO     | ..............................
[2025-12-02 16:14:23] 2025-12-02 21:13:34,224 | INFO     | 
[2025-12-02 16:14:23] 2025-12-02 21:13:34,224 | INFO     | job summary report
[2025-12-02 16:14:23] 2025-12-02 21:13:34,224 | INFO     | --------------------------------------------------
[2025-12-02 16:14:23] 2025-12-02 21:13:34,224 | INFO     | PanDA job id: 6897995331
[2025-12-02 16:14:23] 2025-12-02 21:13:34,224 | INFO     | task id: 47531111
[2025-12-02 16:14:23] 2025-12-02 21:13:34,224 | INFO     | errors: (none)
[2025-12-02 16:14:23] 2025-12-02 21:13:34,224 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 16:14:23] 2025-12-02 21:13:34,224 | INFO     | pilot state: finished 
[2025-12-02 16:14:23] 2025-12-02 21:13:34,224 | INFO     | transexitcode: 0
[2025-12-02 16:14:23] 2025-12-02 21:13:34,224 | INFO     | exeerrorcode: 0
[2025-12-02 16:14:23] 2025-12-02 21:13:34,224 | INFO     | exeerrordiag: 
[2025-12-02 16:14:23] 2025-12-02 21:13:34,224 | INFO     | exitcode: 0
[2025-12-02 16:14:23] 2025-12-02 21:13:34,224 | INFO     | exitmsg: OK
[2025-12-02 16:14:23] 2025-12-02 21:13:34,224 | INFO     | cpuconsumptiontime: 123862 s
[2025-12-02 16:14:23] 2025-12-02 21:13:34,224 | INFO     | nevents: 1000
[2025-12-02 16:14:23] 2025-12-02 21:13:34,224 | INFO     | neventsw: 0
[2025-12-02 16:14:23] 2025-12-02 21:13:34,224 | INFO     | pid: 1529107
[2025-12-02 16:14:23] 2025-12-02 21:13:34,224 | INFO     | pgrp: 1529107
[2025-12-02 16:14:23] 2025-12-02 21:13:34,224 | INFO     | corecount: 8
[2025-12-02 16:14:23] 2025-12-02 21:13:34,225 | INFO     | event service: False
[2025-12-02 16:14:23] 2025-12-02 21:13:34,225 | INFO     | sizes: {0: 2284280, 1: 2284479, 12: 2284479, 23: 2284507, 33: 2284535, 39: 2284853, 44: 2285009, 58037: 2355615, 58041: 2364611, 58044: 2364667, 58061: 2364913}
[2025-12-02 16:14:23] 2025-12-02 21:13:34,225 | INFO     | --------------------------------------------------
[2025-12-02 16:14:23] 2025-12-02 21:13:34,225 | INFO     | 
[2025-12-02 16:14:23] 2025-12-02 21:13:34,225 | INFO     | executing command: ls -lF /tmp/boinchome/slots/11
[2025-12-02 16:14:23] 2025-12-02 21:13:34,329 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 16:14:23] 2025-12-02 21:13:34,329 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 16:14:23] 2025-12-02 21:13:34,329 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 16:14:23] 2025-12-02 21:13:34,329 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 16:14:23] 2025-12-02 21:13:34,329 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 16:14:23] 2025-12-02 21:13:34,330 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 16:14:23] 2025-12-02 21:13:34,331 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 16:14:23] 2025-12-02 21:13:34,331 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 16:14:23] 2025-12-02 21:13:34,331 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 16:14:23] 2025-12-02 21:13:34,331 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 16:14:23] 2025-12-02 21:13:34,331 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 16:14:23] 2025-12-02 21:13:34,331 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 16:14:23] 2025-12-02 21:13:34,332 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 16:14:23] 2025-12-02 21:13:34,332 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 16:14:23] 2025-12-02 21:13:34,332 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 16:14:23] 2025-12-02 21:13:34,332 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 16:14:23] 2025-12-02 21:13:34,332 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 16:14:23] 2025-12-02 21:13:34,332 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 16:14:23] 2025-12-02 21:13:34,332 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 16:14:23] 2025-12-02 21:13:34,332 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 16:14:23] 2025-12-02 21:13:34,332 | INFO     | job 6897995331 has completed (purged errors)
[2025-12-02 16:14:23] 2025-12-02 21:13:34,332 | INFO     | overall cleanup function is called
[2025-12-02 16:14:23] 2025-12-02 21:13:35,369 | INFO     | --- collectZombieJob: --- 10, [1529107]
[2025-12-02 16:14:23] 2025-12-02 21:13:35,369 | INFO     | zombie collector waiting for pid 1529107
[2025-12-02 16:14:23] 2025-12-02 21:13:35,369 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 16:14:23] 2025-12-02 21:13:35,369 | INFO     | collected zombie processes
[2025-12-02 16:14:23] 2025-12-02 21:13:35,369 | INFO     | will attempt to kill all subprocesses of pid=1529107
[2025-12-02 16:14:23] 2025-12-02 21:13:36,130 | INFO     | process IDs to be killed: [1529107] (in reverse order)
[2025-12-02 16:14:23] 2025-12-02 21:13:36,322 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 16:14:23] 2025-12-02 21:13:36,322 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 16:14:23] 2025-12-02 21:13:36,366 | INFO     | did not find any defunct processes belonging to 1529107
[2025-12-02 16:14:23] 2025-12-02 21:13:36,393 | INFO     | did not find any defunct processes belonging to 1529107
[2025-12-02 16:14:23] 2025-12-02 21:13:36,394 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 16:14:23] 2025-12-02 21:13:36,394 | INFO     | ready for new job
[2025-12-02 16:14:23] 2025-12-02 21:13:36,394 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 16:14:23] 2025-12-02 21:13:36,396 | INFO     | ***************************************
[2025-12-02 16:14:23] 2025-12-02 21:13:36,396 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 16:14:23] 2025-12-02 21:13:36,396 | INFO     | ***************************************
[2025-12-02 16:14:23] 2025-12-02 21:13:36,396 | INFO     | 
[2025-12-02 16:14:23] 2025-12-02 21:13:36,401 | INFO     | architecture information:
[2025-12-02 16:14:23] 2025-12-02 21:13:36,401 | INFO     | executing command: cat /etc/os-release
[2025-12-02 16:14:23] 2025-12-02 21:13:36,431 | INFO     | cat /etc/os-release:
[2025-12-02 16:14:23] NAME="CentOS Linux"
[2025-12-02 16:14:23] VERSION="7 (Core)"
[2025-12-02 16:14:23] ID="centos"
[2025-12-02 16:14:23] ID_LIKE="rhel fedora"
[2025-12-02 16:14:23] VERSION_ID="7"
[2025-12-02 16:14:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 16:14:23] ANSI_COLOR="0;31"
[2025-12-02 16:14:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 16:14:23] HOME_URL="https://www.centos.org/"
[2025-12-02 16:14:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 16:14:23] 
[2025-12-02 16:14:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 16:14:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 16:14:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 16:14:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 16:14:23] 
[2025-12-02 16:14:23] 2025-12-02 21:13:36,431 | INFO     | ***************************************
[2025-12-02 16:14:23] 2025-12-02 21:13:36,935 | INFO     | executing command: df -mP /tmp/boinchome/slots/11
[2025-12-02 16:14:23] 2025-12-02 21:13:37,031 | INFO     | sufficient remaining disk space (164414619648 B)
[2025-12-02 16:14:23] 2025-12-02 21:13:37,031 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 16:14:23] 2025-12-02 21:13:37,031 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 16:14:23] 2025-12-02 21:13:37,031 | INFO     | update_server=False
[2025-12-02 16:14:23] 2025-12-02 21:13:37,031 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 16:14:23] 2025-12-02 21:13:37,032 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 16:14:23] 2025-12-02 21:13:37,032 | INFO     | aborting loop
[2025-12-02 16:14:23] 2025-12-02 21:13:37,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 16:14:23] 2025-12-02 21:13:37,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 16:14:23] 2025-12-02 21:13:37,143 | INFO     | all job control threads have been joined
[2025-12-02 16:14:23] 2025-12-02 21:13:37,274 | INFO     | all payload control threads have been joined
[2025-12-02 16:14:23] 2025-12-02 21:13:37,591 | INFO     | all data control threads have been joined
[2025-12-02 16:14:23] 2025-12-02 21:13:38,038 | INFO     | [job] retrieve thread has finished
[2025-12-02 16:14:23] 2025-12-02 21:13:38,038 | INFO     | [job] job monitor thread has finished
[2025-12-02 16:14:23] 2025-12-02 21:13:38,149 | INFO     | [job] control thread has finished
[2025-12-02 16:14:23] 2025-12-02 21:13:38,280 | INFO     | [payload] control thread has finished
[2025-12-02 16:14:23] 2025-12-02 21:13:38,291 | INFO     | [payload] validate_post thread has finished
[2025-12-02 16:14:23] 2025-12-02 21:13:38,596 | INFO     | [data] control thread has finished
[2025-12-02 16:14:23] 2025-12-02 21:13:38,622 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 16:14:23] 2025-12-02 21:13:38,851 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 16:14:23] 2025-12-02 21:13:39,038 | INFO     | [data] copytool_out thread has finished
[2025-12-02 16:14:23] 2025-12-02 21:13:39,197 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 16:14:23] 2025-12-02 21:13:39,252 | INFO     | [data] copytool_in thread has finished
[2025-12-02 16:14:23] 2025-12-02 21:13:39,415 | INFO     | [job] validate thread has finished
[2025-12-02 16:14:23] 2025-12-02 21:13:39,503 | INFO     | [payload] failed_post thread has finished
[2025-12-02 16:14:23] 2025-12-02 21:13:39,519 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 16:14:23] 2025-12-02 21:13:39,865 | INFO     | [job] queue monitor thread has finished
[2025-12-02 16:14:23] 2025-12-02 21:13:41,041 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 16:14:23] 2025-12-02 21:13:47,334 | INFO     | job.realtimelogging is not enabled
[2025-12-02 16:14:23] 2025-12-02 21:13:48,341 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 16:14:23] 2025-12-02 21:14:06,955 | INFO     | PID=1456600 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 16:14:23] 2025-12-02 21:14:06,955 | INFO     | .. there are 58 such processes running
[2025-12-02 16:14:23] 2025-12-02 21:14:06,955 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 16:14:23] 2025-12-02 21:14:06,955 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 16:14:23] 2025-12-02 21:14:06,955 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 16:14:23] 2025-12-02 21:14:16,025 | INFO     | [monitor] cgroup control has ended
[2025-12-02 16:14:23] 2025-12-02 21:14:17,468 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140364234495808)>', '<ExcThread(monitor, started 140363624871680)>']
[2025-12-02 16:14:23] 2025-12-02 21:14:18,026 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 16:14:23] 2025-12-02 21:14:18,026 | INFO     | [monitor] control thread has ended
[2025-12-02 16:14:23] 2025-12-02 21:14:22,494 | INFO     | all workflow threads have been joined
[2025-12-02 16:14:23] 2025-12-02 21:14:22,494 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 16:14:23] 2025-12-02 21:14:22,494 | INFO     | traces error code: 0
[2025-12-02 16:14:23] 2025-12-02 21:14:22,494 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 16:14:23] 2025-12-02 21:14:22,864 [wrapper] ==== pilot stdout END ====
[2025-12-02 16:14:23] 2025-12-02 21:14:22,876 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 16:14:23] 2025-12-02 21:14:22,896 [wrapper] pilotpid: 1456600
[2025-12-02 16:14:23] 2025-12-02 21:14:22,932 [wrapper] Pilot exit status: 0
[2025-12-02 16:14:23] 2025-12-02 21:14:23,026 [wrapper] pandaids: 6897995331
[2025-12-02 16:14:23] 2025-12-02 21:14:23,190 [wrapper] cleanup supervisor_pilot 4155906 1456601
[2025-12-02 16:14:23] 2025-12-02 21:14:23,204 [wrapper] Test setup, not cleaning
[2025-12-02 16:14:23] 2025-12-02 21:14:23,212 [wrapper] apfmon messages muted
[2025-12-02 16:14:23] 2025-12-02 21:14:23,214 [wrapper] ==== wrapper stdout END ====
[2025-12-02 16:14:23] 2025-12-02 21:14:23,225 [wrapper] ==== wrapper stderr END ====
[2025-12-02 16:14:23]  *** Error codes and diagnostics ***
[2025-12-02 16:14:23]     "exeErrorCode": 0,
[2025-12-02 16:14:23]     "exeErrorDiag": "",
[2025-12-02 16:14:23]     "pilotErrorCode": 0,
[2025-12-02 16:14:23]     "pilotErrorDiag": "",
[2025-12-02 16:14:23]  *** Listing of results directory ***
[2025-12-02 16:14:23] total 1081536
[2025-12-02 16:14:23] -rw-r--r--. 1 boincer umatlas    576529 Nov 28 17:41 pilot3.tar.gz
[2025-12-02 16:14:23] -rwx------. 1 boincer umatlas     36292 Nov 28 17:43 runpilot2-wrapper.sh
[2025-12-02 16:14:23] -rw-r--r--. 1 boincer umatlas      5112 Nov 28 17:43 queuedata.json
[2025-12-02 16:14:23] -rw-r--r--. 1 boincer umatlas       100 Dec  2 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 16:14:23] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 00:02 run_atlas
[2025-12-02 16:14:23] -rw-r--r--. 1 boincer umatlas       105 Dec  2 00:02 job.xml
[2025-12-02 16:14:23] -rw-r--r--. 2 boincer umatlas 377363246 Dec  2 00:02 EVNT.47531104._000046.pool.root.1
[2025-12-02 16:14:23] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 00:02 start_atlas.sh
[2025-12-02 16:14:23] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 00:02 shared
[2025-12-02 16:14:23] -rw-r--r--. 2 boincer umatlas    590124 Dec  2 00:02 input.tar.gz
[2025-12-02 16:14:23] -rw-r--r--. 1 boincer umatlas         0 Dec  2 00:02 boinc_lockfile
[2025-12-02 16:14:23] -rw-r--r--. 1 boincer umatlas      2879 Dec  2 00:02 pandaJob.out
[2025-12-02 16:14:23] -rw-------. 1 boincer umatlas        57 Dec  2 00:03 setup.sh.local
[2025-12-02 16:14:23] -rw-------. 1 boincer umatlas    992001 Dec  2 00:04 agis_schedconf.cvmfs.json
[2025-12-02 16:14:23] drwx------. 5 boincer umatlas      4096 Dec  2 00:04 pilot3
[2025-12-02 16:14:23] -rw-r--r--. 1 boincer umatlas       533 Dec  2 16:04 boinc_task_state.xml
[2025-12-02 16:14:23] -rw-r--r--. 1 boincer umatlas      7177 Dec  2 16:11 init_data.xml
[2025-12-02 16:14:23] -rw-------. 1 boincer umatlas 707995538 Dec  2 16:12 HITS.47531111._000410.pool.root.1
[2025-12-02 16:14:23] -rw-------. 1 boincer umatlas      1069 Dec  2 16:13 memory_monitor_summary.json
[2025-12-02 16:14:23] -rw-------. 1 boincer umatlas   1516240 Dec  2 16:13 agis_ddmendpoints.agis.ALL.json
[2025-12-02 16:14:23] -rw-------. 1 boincer umatlas   2142840 Dec  2 16:13 log.47531111._000410.job.log.tgz.1
[2025-12-02 16:14:23] -rw-------. 1 boincer umatlas        95 Dec  2 16:13 pilot_heartbeat.json
[2025-12-02 16:14:23] -rw-------. 1 boincer umatlas     28215 Dec  2 16:13 heartbeat.json
[2025-12-02 16:14:23] -rw-------. 1 boincer umatlas      4898 Dec  2 16:14 pilotlog.txt
[2025-12-02 16:14:23] -rw-r--r--. 1 boincer umatlas      8192 Dec  2 16:14 boinc_mmap_file
[2025-12-02 16:14:23] -rw-------. 1 boincer umatlas   6943676 Dec  2 16:14 log.47531111._000410.job.log.1
[2025-12-02 16:14:23] -rw-------. 1 boincer umatlas       353 Dec  2 16:14 output.list
[2025-12-02 16:14:23] -rw-r--r--. 1 boincer umatlas       620 Dec  2 16:14 runtime_log
[2025-12-02 16:14:23] -rw-------. 1 boincer umatlas   9123840 Dec  2 16:14 result.tar.gz
[2025-12-02 16:14:23] -rw-r--r--. 1 boincer umatlas      9361 Dec  2 16:14 runtime_log.err
[2025-12-02 16:14:23] -rw-------. 1 boincer umatlas       666 Dec  2 16:14 BRkKDmwMMj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5TLKDmYG0IUo.diag
[2025-12-02 16:14:23] -rw-r--r--. 1 boincer umatlas        29 Dec  2 16:14 wrapper_checkpoint.txt
[2025-12-02 16:14:23] -rw-r--r--. 1 boincer umatlas     21165 Dec  2 16:14 stderr.txt
[2025-12-02 16:14:23] HITS file was successfully produced:
[2025-12-02 16:14:23] -rw-------. 1 boincer umatlas 707995538 Dec  2 16:12 shared/HITS.pool.root.1
[2025-12-02 16:14:23]  *** Contents of shared directory: ***
[2025-12-02 16:14:23] total 1069440
[2025-12-02 16:14:23] -rw-r--r--. 2 boincer umatlas 377363246 Dec  2 00:02 ATLAS.root_0
[2025-12-02 16:14:23] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 00:02 start_atlas.sh
[2025-12-02 16:14:23] -rw-r--r--. 2 boincer umatlas    590124 Dec  2 00:02 input.tar.gz
[2025-12-02 16:14:23] -rw-------. 1 boincer umatlas 707995538 Dec  2 16:12 HITS.pool.root.1
[2025-12-02 16:14:23] -rw-------. 1 boincer umatlas   9123840 Dec  2 16:14 result.tar.gz
16:14:45 (1423946): run_atlas exited; CPU time 124756.469756
16:14:45 (1423946): called boinc_finish(0)

</stderr_txt>
]]>

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