Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:03:36 (1129459): wrapper (7.7.26015): starting
06:03:36 (1129459): wrapper: running run_atlas (--nthreads 4)
[2025-12-04 06:03:36] Arguments: --nthreads 4
[2025-12-04 06:03:36] Threads: 4
[2025-12-04 06:03:36] Checking for CVMFS
[2025-12-04 06:03:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-04 06:03:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-04 06:03:36] Running cvmfs_config stat atlas.cern.ch
[2025-12-04 06:03:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-04 06:03:36] 2.9.2.0 3303 7374 104752 153624 2 96 29433912 36864000 453 130560 0 3268404 99.984 262603 895 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-04 06:03:36] CVMFS is ok
[2025-12-04 06:03:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-04 06:03:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-04 06:03:36] Further information can be found at the LHC@home message board.
[2025-12-04 06:03:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-04 06:03:36] Checking for apptainer binary...
[2025-12-04 06:03:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-04 06:03:36] Running /usr/bin/apptainer --version
[2025-12-04 06:03:36] apptainer version 1.4.1-1.1
[2025-12-04 06:03:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-04 06:03:36] thA373a
[2025-12-04 06:03:36] apptainer works
[2025-12-04 06:03:36] Set ATHENA_PROC_NUMBER=4
[2025-12-04 06:03:36] Set ATHENA_CORE_NUMBER=4
[2025-12-04 06:03:36] Starting ATLAS job with PandaID=6898723199
[2025-12-04 06:03:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-04 13:00:23]  *** The last 200 lines of the pilot log: ***
[2025-12-04 13:00:23] 2025-12-04 12:00:11,864 | INFO     | [data] queue_monitor thread has finished
[2025-12-04 13:00:23] 2025-12-04 12:00:17,116 | INFO     | [monitor] cgroup control has ended
[2025-12-04 13:00:23] 2025-12-04 12:00:18,060 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140234739586880)>', '<ExcThread(monitor, started 140233861474048)>']
[2025-12-04 13:00:23] 2025-12-04 12:00:18,917 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-04 13:00:23] 2025-12-04 12:00:18,917 | INFO     | [monitor] control thread has ended
[2025-12-04 13:00:23] 2025-12-04 12:00:23,086 | INFO     | all workflow threads have been joined
[2025-12-04 13:00:23] 2025-12-04 12:00:23,086 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-04 13:00:23] 2025-12-04 12:00:23,087 | INFO     | traces error code: 0
[2025-12-04 13:00:23] 2025-12-04 12:00:23,087 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-04 13:00:23] 2025-12-04 12:00:23,166 [wrapper] ==== pilot stdout END ====
[2025-12-04 13:00:23] 2025-12-04 12:00:23,171 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-04 13:00:23] 2025-12-04 12:00:23,175 [wrapper] pilotpid: 1133254
[2025-12-04 13:00:23] 2025-12-04 12:00:23,179 [wrapper] Pilot exit status: 0
[2025-12-04 13:00:23] 2025-12-04 12:00:23,190 [wrapper] pandaids: 6898723199
[2025-12-04 13:00:23] 2025-12-04 12:00:23,213 [wrapper] cleanup supervisor_pilot 1187413 1133255
[2025-12-04 13:00:23] 2025-12-04 12:00:23,217 [wrapper] Test setup, not cleaning
[2025-12-04 13:00:23] 2025-12-04 12:00:23,221 [wrapper] apfmon messages muted
[2025-12-04 13:00:23] 2025-12-04 12:00:23,225 [wrapper] ==== wrapper stdout END ====
[2025-12-04 13:00:23] 2025-12-04 12:00:23,228 [wrapper] ==== wrapper stderr END ====
[2025-12-04 13:00:23]  *** Error codes and diagnostics ***
[2025-12-04 13:00:23]     "exeErrorCode": 65,
[2025-12-04 13:00:23]     "exeErrorDiag": "Non-zero return code from HITSMergeAthenaMP0 (97); Logfile error in log.HITSMergeAthenaMP0: \"Segmentation fault: Event counter: 745; Run: 284500; Evt: 33389979; Current algorithm: StreamHITS; Current Function: unknown\"",
[2025-12-04 13:00:23]     "pilotErrorCode": 1305,
[2025-12-04 13:00:23]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from HITSMergeAthenaMP0 (97); Logfile error in log.HITSMergeAthenaMP0: \"Segmentation fault: Event counter: 745; Run: 284500; Evt: 33389979",
[2025-12-04 13:00:23]  *** Listing of results directory ***
[2025-12-04 13:00:23] total 411976
[2025-12-04 13:00:23] -rw-r--r-- 1 boinc boinc    576529 Nov 26 23:16 pilot3.tar.gz
[2025-12-04 13:00:23] -rw-r--r-- 1 boinc boinc      5112 Nov 26 23:51 queuedata.json
[2025-12-04 13:00:23] -rwx------ 1 boinc boinc     36292 Nov 26 23:52 runpilot2-wrapper.sh
[2025-12-04 13:00:23] -rw-r--r-- 1 boinc boinc       100 Dec  4 06:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-04 13:00:23] -rwxr-xr-x 1 boinc boinc      7986 Dec  4 06:03 run_atlas
[2025-12-04 13:00:23] -rw-r--r-- 1 boinc boinc       105 Dec  4 06:03 job.xml
[2025-12-04 13:00:23] -rw-r--r-- 2 boinc boinc 408409614 Dec  4 06:03 EVNT.47483658._003232.pool.root.1
[2025-12-04 13:00:23] -rw-r--r-- 2 boinc boinc    590110 Dec  4 06:03 input.tar.gz
[2025-12-04 13:00:23] -rw-r--r-- 2 boinc boinc     15847 Dec  4 06:03 start_atlas.sh
[2025-12-04 13:00:23] drwxrwx--x 2 boinc boinc      4096 Dec  4 06:03 shared
[2025-12-04 13:00:23] -rw-r--r-- 1 boinc boinc         0 Dec  4 06:03 boinc_setup_complete
[2025-12-04 13:00:23] -rw-r--r-- 1 boinc boinc      6379 Dec  4 06:03 init_data.xml
[2025-12-04 13:00:23] -rw-r--r-- 1 boinc boinc         0 Dec  4 06:03 boinc_lockfile
[2025-12-04 13:00:23] -rw-r--r-- 1 boinc boinc      2786 Dec  4 06:03 pandaJob.out
[2025-12-04 13:00:23] -rw------- 1 boinc boinc    985548 Dec  4 06:03 agis_schedconf.cvmfs.json
[2025-12-04 13:00:23] drwx------ 5 boinc boinc      4096 Dec  4 06:03 pilot3
[2025-12-04 13:00:23] -rw-r--r-- 1 boinc boinc       531 Dec  4 12:55 boinc_task_state.xml
[2025-12-04 13:00:23] -rw------- 1 boinc boinc      1025 Dec  4 12:57 memory_monitor_summary.json
[2025-12-04 13:00:23] -rw------- 1 boinc boinc   1252134 Dec  4 12:58 log.47556173._001890.job.log.tgz.1
[2025-12-04 13:00:23] -rw------- 1 boinc boinc   1516240 Dec  4 12:58 agis_ddmendpoints.agis.ALL.json
[2025-12-04 13:00:23] -rw------- 1 boinc boinc        95 Dec  4 13:00 pilot_heartbeat.json
[2025-12-04 13:00:23] -rw-r--r-- 1 boinc boinc      8192 Dec  4 13:00 boinc_mmap_file
[2025-12-04 13:00:23] -rw-r--r-- 1 boinc boinc        28 Dec  4 13:00 wrapper_checkpoint.txt
[2025-12-04 13:00:23] -rw------- 1 boinc boinc      9475 Dec  4 13:00 heartbeat.json
[2025-12-04 13:00:23] -rw------- 1 boinc boinc      4556 Dec  4 13:00 pilotlog.txt
[2025-12-04 13:00:23] -rw------- 1 boinc boinc   3527367 Dec  4 13:00 log.47556173._001890.job.log.1
[2025-12-04 13:00:23] -rw------- 1 boinc boinc       186 Dec  4 13:00 output.list
[2025-12-04 13:00:23] -rw-r--r-- 1 boinc boinc       620 Dec  4 13:00 runtime_log
[2025-12-04 13:00:23] -rw------- 1 boinc boinc   4802560 Dec  4 13:00 result.tar.gz
[2025-12-04 13:00:23] -rw------- 1 boinc boinc       666 Dec  4 13:00 xZlKDmWYdi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmONNKDmbFLLBo.diag
[2025-12-04 13:00:23] -rw-r--r-- 1 boinc boinc      8751 Dec  4 13:00 runtime_log.err
[2025-12-04 13:00:23] -rw-r--r-- 1 boinc boinc      4767 Dec  4 13:00 stderr.txt
[2025-12-04 13:00:23] No HITS result produced
[2025-12-04 13:00:23]  *** Contents of shared directory: ***
[2025-12-04 13:00:23] total 404132
[2025-12-04 13:00:23] -rw-r--r-- 2 boinc boinc 408409614 Dec  4 06:03 ATLAS.root_0
[2025-12-04 13:00:23] -rw-r--r-- 2 boinc boinc    590110 Dec  4 06:03 input.tar.gz
[2025-12-04 13:00:23] -rw-r--r-- 2 boinc boinc     15847 Dec  4 06:03 start_atlas.sh
[2025-12-04 13:00:23] -rw------- 1 boinc boinc   4802560 Dec  4 13:00 result.tar.gz
13:00:24 (1129459): run_atlas exited; CPU time 97565.483458
13:00:24 (1129459): called boinc_finish(0)

</stderr_txt>
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