Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:57 (1424757): wrapper (7.7.26015): starting
00:02:57 (1424757): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 00:02:57] Arguments: --nthreads 8
[2025-12-02 00:02:57] Threads: 8
[2025-12-02 00:02:57] Checking for CVMFS
[2025-12-02 00:02:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 00:02:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 00:02:58] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 00:02:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 00:02:59] 2.13.2.0 1657905 38453 237060 153544 0 513 40602173 40960000 32632 16776704 0 446129170 99.694 351193735 48315 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-02 00:02:59] CVMFS is ok
[2025-12-02 00:02:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 00:02:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 00:02:59] Further information can be found at the LHC@home message board.
[2025-12-02 00:02:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 00:02:59] Checking for apptainer binary...
[2025-12-02 00:02:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 00:02:59] Running /usr/bin/apptainer --version
[2025-12-02 00:02:59] apptainer version 1.4.4-1.el9
[2025-12-02 00:02:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 00:03:00] c-208-39.aglt2.org
[2025-12-02 00:03:00] apptainer works
[2025-12-02 00:03:00] Set ATHENA_PROC_NUMBER=8
[2025-12-02 00:03:00] Set ATHENA_CORE_NUMBER=8
[2025-12-02 00:03:00] Starting ATLAS job with PandaID=6895337561
[2025-12-02 00:03:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 17:07:48]  *** The last 200 lines of the pilot log: ***
[2025-12-02 17:07:48] 2025-12-02 22:07:12,131 | INFO     | sum of square deviations: 312849528675.96405
[2025-12-02 17:07:48] 2025-12-02 22:07:12,223 | INFO     | sum of deviations: 1935222500404.8774
[2025-12-02 17:07:48] 2025-12-02 22:07:12,223 | INFO     | mean x: 1764682634.4177468
[2025-12-02 17:07:48] 2025-12-02 22:07:12,223 | INFO     | mean y: 2825480.8045862415
[2025-12-02 17:07:48] 2025-12-02 22:07:12,223 | INFO     | intersect: -10913136434.343903
[2025-12-02 17:07:48] 2025-12-02 22:07:12,285 | INFO     | chi2: 12.418560807788673
[2025-12-02 17:07:48] 2025-12-02 22:07:12,286 | INFO     | sum of square deviations: 308194357719.0897
[2025-12-02 17:07:48] 2025-12-02 22:07:12,361 | INFO     | sum of deviations: 2271708975087.908
[2025-12-02 17:07:48] 2025-12-02 22:07:12,362 | INFO     | mean x: 1764682481.9298596
[2025-12-02 17:07:48] 2025-12-02 22:07:12,362 | INFO     | mean y: 2836500.6843687375
[2025-12-02 17:07:48] 2025-12-02 22:07:12,362 | INFO     | intersect: -13004685966.791868
[2025-12-02 17:07:48] 2025-12-02 22:07:12,363 | INFO     | chi2: 9.162786098706443
[2025-12-02 17:07:48] 2025-12-02 22:07:12,363 | INFO     | current chi2=9.162786098706443 (change=26.21700500947157 %)
[2025-12-02 17:07:48] 2025-12-02 22:07:12,363 | INFO     | sum of square deviations: 303585606236.92084
[2025-12-02 17:07:48] 2025-12-02 22:07:12,423 | INFO     | sum of deviations: 2564836402380.39
[2025-12-02 17:07:48] 2025-12-02 22:07:12,423 | INFO     | mean x: 1764682329.4420946
[2025-12-02 17:07:48] 2025-12-02 22:07:12,423 | INFO     | mean y: 2846190.0241691843
[2025-12-02 17:07:48] 2025-12-02 22:07:12,423 | INFO     | intersect: -14906034152.801714
[2025-12-02 17:07:48] 2025-12-02 22:07:12,424 | INFO     | chi2: 6.394969238184023
[2025-12-02 17:07:48] 2025-12-02 22:07:12,424 | INFO     | current chi2=6.394969238184023 (change=30.207153487007254 %)
[2025-12-02 17:07:48] 2025-12-02 22:07:12,425 | INFO     | sum of square deviations: 299022435835.9385
[2025-12-02 17:07:48] 2025-12-02 22:07:12,498 | INFO     | time since job start (61365s) is within the limit (172800.0s)
[2025-12-02 17:07:48] 2025-12-02 22:07:12,501 | INFO     | sum of deviations: 2544863214967.3325
[2025-12-02 17:07:48] 2025-12-02 22:07:12,501 | INFO     | mean x: 1764682176.944332
[2025-12-02 17:07:48] 2025-12-02 22:07:12,502 | INFO     | mean y: 2845521.024291498
[2025-12-02 17:07:48] 2025-12-02 22:07:12,502 | INFO     | intersect: -15015675566.396936
[2025-12-02 17:07:48] 2025-12-02 22:07:12,502 | INFO     | chi2: 6.3791149317138025
[2025-12-02 17:07:48] 2025-12-02 22:07:12,502 | INFO     | current chi2=6.3791149317138025 (change=0.24791841648831656 %)
[2025-12-02 17:07:48] 2025-12-02 22:07:12,502 | INFO     | right removable region: 987
[2025-12-02 17:07:48] 2025-12-02 22:07:12,503 | INFO     | sum of square deviations: 308192878469.0899
[2025-12-02 17:07:48] 2025-12-02 22:07:12,546 | INFO     | sum of deviations: 1541177646464.4507
[2025-12-02 17:07:48] 2025-12-02 22:07:12,546 | INFO     | mean x: 1764682786.9298596
[2025-12-02 17:07:48] 2025-12-02 22:07:12,546 | INFO     | mean y: 2838384.5921843685
[2025-12-02 17:07:48] 2025-12-02 22:07:12,546 | INFO     | intersect: -8821796622.636442
[2025-12-02 17:07:48] 2025-12-02 22:07:12,551 | INFO     | chi2: 8.27175350988088
[2025-12-02 17:07:48] 2025-12-02 22:07:12,551 | INFO     | current chi2=8.27175350988088 (change=33.39201186104431 %)
[2025-12-02 17:07:48] 2025-12-02 22:07:12,552 | INFO     | sum of square deviations: 303582769010.68414
[2025-12-02 17:07:48] 2025-12-02 22:07:12,576 | INFO     | sum of deviations: 1286687555534.0427
[2025-12-02 17:07:48] 2025-12-02 22:07:12,577 | INFO     | mean x: 1764682939.4400806
[2025-12-02 17:07:48] 2025-12-02 22:07:12,577 | INFO     | mean y: 2846794.44612286
[2025-12-02 17:07:48] 2025-12-02 22:07:12,577 | INFO     | intersect: -7476482763.816377
[2025-12-02 17:07:48] 2025-12-02 22:07:12,577 | INFO     | chi2: 6.408496956495729
[2025-12-02 17:07:48] 2025-12-02 22:07:12,577 | INFO     | current chi2=6.408496956495729 (change=22.525532840883486 %)
[2025-12-02 17:07:48] 2025-12-02 22:07:12,577 | INFO     | left removable region: 20
[2025-12-02 17:07:48] 2025-12-02 22:07:12,578 | INFO     | sum of square deviations: 280354184659.0236
[2025-12-02 17:07:48] 2025-12-02 22:07:12,601 | INFO     | sum of deviations: 1757779644936.557
[2025-12-02 17:07:48] 2025-12-02 22:07:12,601 | INFO     | mean x: 1764682756.4725957
[2025-12-02 17:07:48] 2025-12-02 22:07:12,601 | INFO     | mean y: 2871916.5305067217
[2025-12-02 17:07:48] 2025-12-02 22:07:12,601 | INFO     | intersect: -11061430308.423723
[2025-12-02 17:07:48] 2025-12-02 22:07:12,602 | INFO     | chi2: 0.14652829921525085
[2025-12-02 17:07:48] 2025-12-02 22:07:12,602 | INFO     | current memory leak: 6.27 B/s (using 967 data points, chi2=0.15)
[2025-12-02 17:07:48] 2025-12-02 22:07:12,603 | INFO     | could have reported an average CPU frequency of 3745 MHz (37 samples)
[2025-12-02 17:07:48] 2025-12-02 22:07:12,603 | INFO     | ..............................
[2025-12-02 17:07:48] 2025-12-02 22:07:12,603 | INFO     | . Timing measurements:
[2025-12-02 17:07:48] 2025-12-02 22:07:12,603 | INFO     | . get job = 0 s
[2025-12-02 17:07:48] 2025-12-02 22:07:12,604 | INFO     | . initial setup = 4 s
[2025-12-02 17:07:48] 2025-12-02 22:07:12,604 | INFO     | . payload setup = 64 s
[2025-12-02 17:07:48] 2025-12-02 22:07:12,604 | INFO     | . stage-in = 0 s
[2025-12-02 17:07:48] 2025-12-02 22:07:12,604 | INFO     | . payload execution = 61177 s
[2025-12-02 17:07:48] 2025-12-02 22:07:12,604 | INFO     | . stage-out = 4 s
[2025-12-02 17:07:48] 2025-12-02 22:07:12,604 | INFO     | . log creation = 1 s
[2025-12-02 17:07:48] 2025-12-02 22:07:12,604 | INFO     | ..............................
[2025-12-02 17:07:48] 2025-12-02 22:07:12,908 | INFO     | 
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | job summary report
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | --------------------------------------------------
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | PanDA job id: 6895337561
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | task id: 47556149
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | errors: (none)
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | pilot state: finished 
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | transexitcode: 0
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | exeerrorcode: 0
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | exeerrordiag: 
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | exitcode: 0
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | exitmsg: OK
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | cpuconsumptiontime: 141874 s
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | nevents: 1000
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | neventsw: 0
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | pid: 1513306
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | pgrp: 1513306
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | corecount: 8
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | event service: False
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | sizes: {0: 2284142, 1: 2284341, 2: 2284341, 12: 2284369, 23: 2284397, 34: 2284425, 37: 2284843, 44: 2284871, 61243: 2337354, 61249: 2346350, 61252: 2346406, 61279:
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | --------------------------------------------------
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | 
[2025-12-02 17:07:48] 2025-12-02 22:07:12,909 | INFO     | executing command: ls -lF /tmp/boinchome/slots/12
[2025-12-02 17:07:48] 2025-12-02 22:07:12,989 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 17:07:48] 2025-12-02 22:07:12,989 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 17:07:48] 2025-12-02 22:07:12,989 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 17:07:48] 2025-12-02 22:07:12,989 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 17:07:48] 2025-12-02 22:07:12,989 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 17:07:48] 2025-12-02 22:07:12,989 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 17:07:48] 2025-12-02 22:07:12,989 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 17:07:48] 2025-12-02 22:07:12,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 17:07:48] 2025-12-02 22:07:12,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 17:07:48] 2025-12-02 22:07:12,989 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 17:07:48] 2025-12-02 22:07:12,989 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 17:07:48] 2025-12-02 22:07:12,990 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 17:07:48] 2025-12-02 22:07:12,990 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 17:07:48] 2025-12-02 22:07:12,990 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 17:07:48] 2025-12-02 22:07:12,990 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 17:07:48] 2025-12-02 22:07:12,990 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 17:07:48] 2025-12-02 22:07:12,990 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 17:07:48] 2025-12-02 22:07:12,990 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 17:07:48] 2025-12-02 22:07:12,990 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 17:07:48] 2025-12-02 22:07:12,990 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 17:07:48] 2025-12-02 22:07:12,990 | INFO     | job 6895337561 has completed (purged errors)
[2025-12-02 17:07:48] 2025-12-02 22:07:12,990 | INFO     | overall cleanup function is called
[2025-12-02 17:07:48] 2025-12-02 22:07:14,046 | INFO     | --- collectZombieJob: --- 10, [1513306]
[2025-12-02 17:07:48] 2025-12-02 22:07:14,046 | INFO     | zombie collector waiting for pid 1513306
[2025-12-02 17:07:48] 2025-12-02 22:07:14,046 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 17:07:48] 2025-12-02 22:07:14,046 | INFO     | collected zombie processes
[2025-12-02 17:07:48] 2025-12-02 22:07:14,046 | INFO     | will attempt to kill all subprocesses of pid=1513306
[2025-12-02 17:07:48] 2025-12-02 22:07:15,302 | INFO     | process IDs to be killed: [1513306] (in reverse order)
[2025-12-02 17:07:48] 2025-12-02 22:07:15,645 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 17:07:48] 2025-12-02 22:07:15,645 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 17:07:48] 2025-12-02 22:07:15,700 | INFO     | did not find any defunct processes belonging to 1513306
[2025-12-02 17:07:48] 2025-12-02 22:07:15,768 | INFO     | did not find any defunct processes belonging to 1513306
[2025-12-02 17:07:48] 2025-12-02 22:07:15,773 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 17:07:48] 2025-12-02 22:07:15,773 | INFO     | ready for new job
[2025-12-02 17:07:48] 2025-12-02 22:07:15,773 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 17:07:48] 2025-12-02 22:07:15,776 | INFO     | ***************************************
[2025-12-02 17:07:48] 2025-12-02 22:07:15,776 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 17:07:48] 2025-12-02 22:07:15,776 | INFO     | ***************************************
[2025-12-02 17:07:48] 2025-12-02 22:07:15,776 | INFO     | 
[2025-12-02 17:07:48] 2025-12-02 22:07:15,792 | INFO     | architecture information:
[2025-12-02 17:07:48] 2025-12-02 22:07:15,798 | INFO     | executing command: cat /etc/os-release
[2025-12-02 17:07:48] 2025-12-02 22:07:15,896 | INFO     | cat /etc/os-release:
[2025-12-02 17:07:48] NAME="CentOS Linux"
[2025-12-02 17:07:48] VERSION="7 (Core)"
[2025-12-02 17:07:48] ID="centos"
[2025-12-02 17:07:48] ID_LIKE="rhel fedora"
[2025-12-02 17:07:48] VERSION_ID="7"
[2025-12-02 17:07:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 17:07:48] ANSI_COLOR="0;31"
[2025-12-02 17:07:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 17:07:48] HOME_URL="https://www.centos.org/"
[2025-12-02 17:07:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 17:07:48] 
[2025-12-02 17:07:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 17:07:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 17:07:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 17:07:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 17:07:48] 
[2025-12-02 17:07:48] 2025-12-02 22:07:15,896 | INFO     | ***************************************
[2025-12-02 17:07:48] 2025-12-02 22:07:16,400 | INFO     | executing command: df -mP /tmp/boinchome/slots/12
[2025-12-02 17:07:48] 2025-12-02 22:07:16,522 | INFO     | sufficient remaining disk space (165137088512 B)
[2025-12-02 17:07:48] 2025-12-02 22:07:16,523 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 17:07:48] 2025-12-02 22:07:16,523 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 17:07:48] 2025-12-02 22:07:16,523 | INFO     | update_server=False
[2025-12-02 17:07:48] 2025-12-02 22:07:16,523 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 17:07:48] 2025-12-02 22:07:16,524 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 17:07:48] 2025-12-02 22:07:16,572 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 17:07:48] 2025-12-02 22:07:16,572 | INFO     | aborting loop
[2025-12-02 17:07:48] 2025-12-02 22:07:16,813 | INFO     | all payload control threads have been joined
[2025-12-02 17:07:48] 2025-12-02 22:07:16,891 | INFO     | all data control threads have been joined
[2025-12-02 17:07:48] 2025-12-02 22:07:16,933 | INFO     | all job control threads have been joined
[2025-12-02 17:07:48] 2025-12-02 22:07:17,185 | INFO     | [monitor] cgroup control has ended
[2025-12-02 17:07:48] 2025-12-02 22:07:17,529 | INFO     | [job] retrieve thread has finished
[2025-12-02 17:07:48] 2025-12-02 22:07:17,578 | INFO     | [job] job monitor thread has finished
[2025-12-02 17:07:48] 2025-12-02 22:07:17,819 | INFO     | [payload] control thread has finished
[2025-12-02 17:07:48] 2025-12-02 22:07:17,899 | INFO     | [data] control thread has finished
[2025-12-02 17:07:48] 2025-12-02 22:07:17,923 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 17:07:48] 2025-12-02 22:07:17,939 | INFO     | [job] control thread has finished
[2025-12-02 17:07:48] 2025-12-02 22:07:18,036 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 17:07:48] 2025-12-02 22:07:18,036 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 17:07:48] 2025-12-02 22:07:18,073 | INFO     | [job] validate thread has finished
[2025-12-02 17:07:48] 2025-12-02 22:07:18,532 | INFO     | [data] copytool_out thread has finished
[2025-12-02 17:07:48] 2025-12-02 22:07:18,563 | INFO     | [payload] validate_post thread has finished
[2025-12-02 17:07:48] 2025-12-02 22:07:18,706 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 17:07:48] 2025-12-02 22:07:18,812 | INFO     | [payload] failed_post thread has finished
[2025-12-02 17:07:48] 2025-12-02 22:07:18,856 | INFO     | [data] copytool_in thread has finished
[2025-12-02 17:07:48] 2025-12-02 22:07:18,929 | INFO     | [job] queue monitor thread has finished
[2025-12-02 17:07:48] 2025-12-02 22:07:19,176 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 17:07:48] 2025-12-02 22:07:23,191 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 17:07:48] 2025-12-02 22:07:27,392 | INFO     | job.realtimelogging is not enabled
[2025-12-02 17:07:48] 2025-12-02 22:07:28,398 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 17:07:48] 2025-12-02 22:07:29,917 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140691994470208)>', '<ExcThread(monitor, started 140691510388480)>']
[2025-12-02 17:07:48] 2025-12-02 22:07:34,943 | INFO     | all workflow threads have been joined
[2025-12-02 17:07:48] 2025-12-02 22:07:34,943 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 17:07:48] 2025-12-02 22:07:34,943 | INFO     | traces error code: 0
[2025-12-02 17:07:48] 2025-12-02 22:07:34,943 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 17:07:48] 2025-12-02 22:07:47,136 | INFO     | PID=1455925 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 17:07:48] 2025-12-02 22:07:47,136 | INFO     | .. there are 57 such processes running
[2025-12-02 17:07:48] 2025-12-02 22:07:47,137 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 17:07:48] 2025-12-02 22:07:47,137 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 17:07:48] 2025-12-02 22:07:47,137 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 17:07:48] 2025-12-02 22:07:47,137 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 17:07:48] 2025-12-02 22:07:47,137 | CRITICAL | thread 'MainThread' is not alive
[2025-12-02 17:07:48] 2025-12-02 22:07:47,137 | INFO     | [monitor] control thread has ended
[2025-12-02 17:07:48] 2025-12-02 22:07:47,593 [wrapper] ==== pilot stdout END ====
[2025-12-02 17:07:48] 2025-12-02 22:07:47,610 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 17:07:48] 2025-12-02 22:07:47,625 [wrapper] pilotpid: 1455925
[2025-12-02 17:07:48] 2025-12-02 22:07:47,633 [wrapper] Pilot exit status: 0
[2025-12-02 17:07:48] 2025-12-02 22:07:47,704 [wrapper] pandaids: 6895337561
[2025-12-02 17:07:48] 2025-12-02 22:07:47,832 [wrapper] cleanup supervisor_pilot  401392 1455926
[2025-12-02 17:07:48] 2025-12-02 22:07:47,852 [wrapper] Test setup, not cleaning
[2025-12-02 17:07:48] 2025-12-02 22:07:47,864 [wrapper] apfmon messages muted
[2025-12-02 17:07:48] 2025-12-02 22:07:47,869 [wrapper] ==== wrapper stdout END ====
[2025-12-02 17:07:48] 2025-12-02 22:07:47,891 [wrapper] ==== wrapper stderr END ====
[2025-12-02 17:07:48]  *** Error codes and diagnostics ***
[2025-12-02 17:07:48]     "exeErrorCode": 0,
[2025-12-02 17:07:48]     "exeErrorDiag": "",
[2025-12-02 17:07:48]     "pilotErrorCode": 0,
[2025-12-02 17:07:48]     "pilotErrorDiag": "",
[2025-12-02 17:07:48]  *** Listing of results directory ***
[2025-12-02 17:07:48] total 1318784
[2025-12-02 17:07:48] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 02:52 pilot3.tar.gz
[2025-12-02 17:07:48] -rwx------. 1 boincer umatlas     36292 Nov 22 03:21 runpilot2-wrapper.sh
[2025-12-02 17:07:48] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 03:21 queuedata.json
[2025-12-02 17:07:48] -rw-r--r--. 1 boincer umatlas       100 Dec  2 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 17:07:48] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 00:02 run_atlas
[2025-12-02 17:07:48] -rw-r--r--. 1 boincer umatlas       105 Dec  2 00:02 job.xml
[2025-12-02 17:07:48] -rw-r--r--. 2 boincer umatlas 410792078 Dec  2 00:02 EVNT.47483658._001076.pool.root.1
[2025-12-02 17:07:48] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 00:02 start_atlas.sh
[2025-12-02 17:07:48] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 00:02 shared
[2025-12-02 17:07:48] -rw-r--r--. 2 boincer umatlas    590091 Dec  2 00:02 input.tar.gz
[2025-12-02 17:07:48] -rw-r--r--. 1 boincer umatlas         0 Dec  2 00:02 boinc_lockfile
[2025-12-02 17:07:48] -rw-r--r--. 1 boincer umatlas      2784 Dec  2 00:03 pandaJob.out
[2025-12-02 17:07:48] -rw-------. 1 boincer umatlas        57 Dec  2 00:03 setup.sh.local
[2025-12-02 17:07:48] -rw-------. 1 boincer umatlas    992001 Dec  2 00:04 agis_schedconf.cvmfs.json
[2025-12-02 17:07:48] drwx------. 5 boincer umatlas      4096 Dec  2 00:04 pilot3
[2025-12-02 17:07:48] -rw-r--r--. 1 boincer umatlas       533 Dec  2 16:55 boinc_task_state.xml
[2025-12-02 17:07:48] -rw-r--r--. 1 boincer umatlas      7177 Dec  2 17:03 init_data.xml
[2025-12-02 17:07:48] -rw-------. 1 boincer umatlas 916732833 Dec  2 17:05 HITS.47556149._000622.pool.root.1
[2025-12-02 17:07:48] -rw-------. 1 boincer umatlas      1071 Dec  2 17:06 memory_monitor_summary.json
[2025-12-02 17:07:48] -rw-------. 1 boincer umatlas   1516240 Dec  2 17:06 agis_ddmendpoints.agis.ALL.json
[2025-12-02 17:07:48] -rw-------. 1 boincer umatlas   2105966 Dec  2 17:06 log.47556149._000622.job.log.tgz.1
[2025-12-02 17:07:48] -rw-------. 1 boincer umatlas        95 Dec  2 17:07 pilot_heartbeat.json
[2025-12-02 17:07:48] -rw-------. 1 boincer umatlas      8629 Dec  2 17:07 heartbeat.json
[2025-12-02 17:07:48] -rw-r--r--. 1 boincer umatlas      8192 Dec  2 17:07 boinc_mmap_file
[2025-12-02 17:07:48] -rw-r--r--. 1 boincer umatlas        29 Dec  2 17:07 wrapper_checkpoint.txt
[2025-12-02 17:07:48] -rw-------. 1 boincer umatlas       893 Dec  2 17:07 pilotlog.txt
[2025-12-02 17:07:48] -rw-------. 1 boincer umatlas   7388074 Dec  2 17:07 log.47556149._000622.job.log.1
[2025-12-02 17:07:48] -rw-------. 1 boincer umatlas       353 Dec  2 17:07 output.list
[2025-12-02 17:07:48] -rw-r--r--. 1 boincer umatlas       620 Dec  2 17:07 runtime_log
[2025-12-02 17:07:48] -rw-------. 1 boincer umatlas   9512960 Dec  2 17:07 result.tar.gz
[2025-12-02 17:07:48] -rw-r--r--. 1 boincer umatlas      9361 Dec  2 17:07 runtime_log.err
[2025-12-02 17:07:48] -rw-------. 1 boincer umatlas       666 Dec  2 17:07 NsMODmX3xg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDma3JKDmDqI1Im.diag
[2025-12-02 17:07:48] -rw-r--r--. 1 boincer umatlas     21201 Dec  2 17:07 stderr.txt
[2025-12-02 17:07:48] HITS file was successfully produced:
[2025-12-02 17:07:48] -rw-------. 1 boincer umatlas 916732833 Dec  2 17:05 shared/HITS.pool.root.1
[2025-12-02 17:07:48]  *** Contents of shared directory: ***
[2025-12-02 17:07:48] total 1306312
[2025-12-02 17:07:48] -rw-r--r--. 2 boincer umatlas 410792078 Dec  2 00:02 ATLAS.root_0
[2025-12-02 17:07:48] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 00:02 start_atlas.sh
[2025-12-02 17:07:48] -rw-r--r--. 2 boincer umatlas    590091 Dec  2 00:02 input.tar.gz
[2025-12-02 17:07:48] -rw-------. 1 boincer umatlas 916732833 Dec  2 17:05 HITS.pool.root.1
[2025-12-02 17:07:48] -rw-------. 1 boincer umatlas   9512960 Dec  2 17:07 result.tar.gz
17:08:30 (1424757): run_atlas exited; CPU time 142761.949213
17:08:30 (1424757): called boinc_finish(0)

</stderr_txt>
]]>

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