Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:09:43 (29650): wrapper (7.7.26015): starting
23:09:43 (29650): wrapper: running run_atlas (--nthreads 12)
[2025-12-01 23:09:43] Arguments: --nthreads 12
[2025-12-01 23:09:43] Threads: 12
[2025-12-01 23:09:43] Checking for CVMFS
[2025-12-01 23:09:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 23:09:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 23:09:44] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 23:09:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 23:09:44] 2.11.2.0 10903 14288 91340 153542 3 82 14726649 20275200 1 130560 0 6353076 99.794 1655035 41375 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-01 23:09:44] CVMFS is ok
[2025-12-01 23:09:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 23:09:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 23:09:44] Further information can be found at the LHC@home message board.
[2025-12-01 23:09:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 23:09:44] Checking for apptainer binary...
[2025-12-01 23:09:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 23:09:44] Running /usr/bin/apptainer --version
[2025-12-01 23:09:44] apptainer version 1.3.2-1.el7
[2025-12-01 23:09:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 23:09:45] c-205-22.aglt2.org
[2025-12-01 23:09:45] apptainer works
[2025-12-01 23:09:45] Set ATHENA_PROC_NUMBER=12
[2025-12-01 23:09:45] Set ATHENA_CORE_NUMBER=12
[2025-12-01 23:09:45] Starting ATLAS job with PandaID=6905271032
[2025-12-01 23:09:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 05:23:02]  *** The last 200 lines of the pilot log: ***
[2025-12-02 05:23:02] 2025-12-02 10:22:29,324 | INFO     | time since job start (22348s) is within the limit (172800.0s)
[2025-12-02 05:23:02] 2025-12-02 10:22:30,258 | INFO     | monitor loop #1681: job 0:6905271032 is in state 'finished'
[2025-12-02 05:23:02] 2025-12-02 10:22:30,258 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 05:23:02] 2025-12-02 10:22:30,391 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-02 05:23:02] 2025-12-02 10:22:30,395 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-12-02 05:23:02] 2025-12-02 10:22:30,397 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6905271032/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 05:23:02] 2025-12-02 10:22:30,398 | INFO     | extracted standard info from prmon json
[2025-12-02 05:23:02] 2025-12-02 10:22:30,398 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 05:23:02] 2025-12-02 10:22:30,398 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 05:23:02] 2025-12-02 10:22:30,404 | INFO     | fitting pss+swap vs Time
[2025-12-02 05:23:02] 2025-12-02 10:22:30,404 | INFO     | sum of square deviations: 15202716775.464472
[2025-12-02 05:23:02] 2025-12-02 10:22:30,407 | INFO     | sum of deviations: 341595220582.8635
[2025-12-02 05:23:02] 2025-12-02 10:22:30,407 | INFO     | mean x: 1764659768.6284153
[2025-12-02 05:23:02] 2025-12-02 10:22:30,408 | INFO     | mean y: 3990823.1092896173
[2025-12-02 05:23:02] 2025-12-02 10:22:30,408 | INFO     | intersect: -39646773696.24168
[2025-12-02 05:23:02] 2025-12-02 10:22:30,408 | INFO     | chi2: 5.581659200897464
[2025-12-02 05:23:02] 2025-12-02 10:22:30,409 | INFO     | sum of square deviations: 14588142842.88086
[2025-12-02 05:23:02] 2025-12-02 10:22:30,411 | INFO     | sum of deviations: 489240921735.24146
[2025-12-02 05:23:02] 2025-12-02 10:22:30,412 | INFO     | mean x: 1764659616.130194
[2025-12-02 05:23:02] 2025-12-02 10:22:30,412 | INFO     | mean y: 4027399.271468144
[2025-12-02 05:23:02] 2025-12-02 10:22:30,412 | INFO     | intersect: -59177165604.04579
[2025-12-02 05:23:02] 2025-12-02 10:22:30,412 | INFO     | chi2: 3.0416803574201334
[2025-12-02 05:23:02] 2025-12-02 10:22:30,412 | INFO     | current chi2=3.0416803574201334 (change=45.50580306065502 %)
[2025-12-02 05:23:02] 2025-12-02 10:22:30,413 | INFO     | sum of square deviations: 13990359922.794949
[2025-12-02 05:23:02] 2025-12-02 10:22:30,416 | INFO     | sum of deviations: 516787268934.2222
[2025-12-02 05:23:02] 2025-12-02 10:22:30,416 | INFO     | mean x: 1764659463.6320224
[2025-12-02 05:23:02] 2025-12-02 10:22:30,416 | INFO     | mean y: 4034352.261235955
[2025-12-02 05:23:02] 2025-12-02 10:22:30,416 | INFO     | intersect: -65180389053.70466
[2025-12-02 05:23:02] 2025-12-02 10:22:30,416 | INFO     | chi2: 2.7330126065824936
[2025-12-02 05:23:02] 2025-12-02 10:22:30,417 | INFO     | current chi2=2.7330126065824936 (change=10.14793517289381 %)
[2025-12-02 05:23:02] 2025-12-02 10:22:30,417 | INFO     | right removable region: 355
[2025-12-02 05:23:02] 2025-12-02 10:22:30,417 | INFO     | sum of square deviations: 14588114172.880857
[2025-12-02 05:23:02] 2025-12-02 10:22:30,420 | INFO     | sum of deviations: 189983439470.77582
[2025-12-02 05:23:02] 2025-12-02 10:22:30,420 | INFO     | mean x: 1764659921.130194
[2025-12-02 05:23:02] 2025-12-02 10:22:30,420 | INFO     | mean y: 4028338.91966759
[2025-12-02 05:23:02] 2025-12-02 10:22:30,420 | INFO     | intersect: -22977431590.683826
[2025-12-02 05:23:02] 2025-12-02 10:22:30,421 | INFO     | chi2: 3.02187312290786
[2025-12-02 05:23:02] 2025-12-02 10:22:30,421 | INFO     | current chi2=3.02187312290786 (change=45.860665903393404 %)
[2025-12-02 05:23:02] 2025-12-02 10:22:30,422 | INFO     | sum of square deviations: 13990302582.794949
[2025-12-02 05:23:02] 2025-12-02 10:22:30,424 | INFO     | sum of deviations: 153406900099.16583
[2025-12-02 05:23:02] 2025-12-02 10:22:30,424 | INFO     | mean x: 1764660073.6320224
[2025-12-02 05:23:02] 2025-12-02 10:22:30,425 | INFO     | mean y: 4037660.283707865
[2025-12-02 05:23:02] 2025-12-02 10:22:30,425 | INFO     | intersect: -19345867749.022476
[2025-12-02 05:23:02] 2025-12-02 10:22:30,425 | INFO     | chi2: 2.944607586410743
[2025-12-02 05:23:02] 2025-12-02 10:22:30,425 | INFO     | current chi2=2.944607586410743 (change=2.556875598495238 %)
[2025-12-02 05:23:02] 2025-12-02 10:22:30,425 | INFO     | left removable region: 20
[2025-12-02 05:23:02] 2025-12-02 10:22:30,426 | INFO     | sum of square deviations: 11657666364.405949
[2025-12-02 05:23:02] 2025-12-02 10:22:30,428 | INFO     | sum of deviations: 279167149701.421
[2025-12-02 05:23:02] 2025-12-02 10:22:30,428 | INFO     | mean x: 1764660043.1402986
[2025-12-02 05:23:02] 2025-12-02 10:22:30,428 | INFO     | mean y: 4096713.991044776
[2025-12-02 05:23:02] 2025-12-02 10:22:30,429 | INFO     | intersect: -42254370721.61973
[2025-12-02 05:23:02] 2025-12-02 10:22:30,429 | INFO     | chi2: 0.02969179982521097
[2025-12-02 05:23:02] 2025-12-02 10:22:30,429 | INFO     | current memory leak: 23.95 B/s (using 335 data points, chi2=0.03)
[2025-12-02 05:23:02] 2025-12-02 10:22:30,429 | INFO     | could have reported an average CPU frequency of 2356 MHz (16 samples)
[2025-12-02 05:23:02] 2025-12-02 10:22:30,430 | INFO     | ..............................
[2025-12-02 05:23:02] 2025-12-02 10:22:30,430 | INFO     | . Timing measurements:
[2025-12-02 05:23:02] 2025-12-02 10:22:30,430 | INFO     | . get job = 0 s
[2025-12-02 05:23:02] 2025-12-02 10:22:30,430 | INFO     | . initial setup = 2 s
[2025-12-02 05:23:02] 2025-12-02 10:22:30,430 | INFO     | . payload setup = 13 s
[2025-12-02 05:23:02] 2025-12-02 10:22:30,430 | INFO     | . stage-in = 0 s
[2025-12-02 05:23:02] 2025-12-02 10:22:30,430 | INFO     | . payload execution = 22302 s
[2025-12-02 05:23:02] 2025-12-02 10:22:30,430 | INFO     | . stage-out = 3 s
[2025-12-02 05:23:02] 2025-12-02 10:22:30,430 | INFO     | . log creation = 0 s
[2025-12-02 05:23:02] 2025-12-02 10:22:30,431 | INFO     | ..............................
[2025-12-02 05:23:02] 2025-12-02 10:22:30,511 | INFO     | 
[2025-12-02 05:23:02] 2025-12-02 10:22:30,511 | INFO     | job summary report
[2025-12-02 05:23:02] 2025-12-02 10:22:30,511 | INFO     | --------------------------------------------------
[2025-12-02 05:23:02] 2025-12-02 10:22:30,512 | INFO     | PanDA job id: 6905271032
[2025-12-02 05:23:02] 2025-12-02 10:22:30,512 | INFO     | task id: 47538113
[2025-12-02 05:23:02] 2025-12-02 10:22:30,512 | INFO     | errors: (none)
[2025-12-02 05:23:02] 2025-12-02 10:22:30,512 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 05:23:02] 2025-12-02 10:22:30,512 | INFO     | pilot state: finished 
[2025-12-02 05:23:02] 2025-12-02 10:22:30,512 | INFO     | transexitcode: 0
[2025-12-02 05:23:02] 2025-12-02 10:22:30,513 | INFO     | exeerrorcode: 0
[2025-12-02 05:23:02] 2025-12-02 10:22:30,513 | INFO     | exeerrordiag: 
[2025-12-02 05:23:02] 2025-12-02 10:22:30,513 | INFO     | exitcode: 0
[2025-12-02 05:23:02] 2025-12-02 10:22:30,513 | INFO     | exitmsg: OK
[2025-12-02 05:23:02] 2025-12-02 10:22:30,513 | INFO     | cpuconsumptiontime: 254049 s
[2025-12-02 05:23:02] 2025-12-02 10:22:30,513 | INFO     | nevents: 1000
[2025-12-02 05:23:02] 2025-12-02 10:22:30,513 | INFO     | neventsw: 0
[2025-12-02 05:23:02] 2025-12-02 10:22:30,514 | INFO     | pid: 9104
[2025-12-02 05:23:02] 2025-12-02 10:22:30,514 | INFO     | pgrp: 9104
[2025-12-02 05:23:02] 2025-12-02 10:22:30,514 | INFO     | corecount: 12
[2025-12-02 05:23:02] 2025-12-02 10:22:30,514 | INFO     | event service: False
[2025-12-02 05:23:02] 2025-12-02 10:22:30,514 | INFO     | sizes: {0: 2284177, 1: 2284432, 6: 2284694, 12: 2284722, 22320: 2339130, 22324: 2348124, 22326: 2348308, 22334: 2348554}
[2025-12-02 05:23:02] 2025-12-02 10:22:30,514 | INFO     | --------------------------------------------------
[2025-12-02 05:23:02] 2025-12-02 10:22:30,515 | INFO     | 
[2025-12-02 05:23:02] 2025-12-02 10:22:30,515 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-02 05:23:02] 2025-12-02 10:22:30,538 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 05:23:02] 2025-12-02 10:22:30,538 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 05:23:02] 2025-12-02 10:22:30,539 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 05:23:02] 2025-12-02 10:22:30,539 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 05:23:02] 2025-12-02 10:22:30,539 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 05:23:02] 2025-12-02 10:22:30,539 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 05:23:02] 2025-12-02 10:22:30,539 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 05:23:02] 2025-12-02 10:22:30,539 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 05:23:02] 2025-12-02 10:22:30,540 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 05:23:02] 2025-12-02 10:22:30,540 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 05:23:02] 2025-12-02 10:22:30,540 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 05:23:02] 2025-12-02 10:22:30,540 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 05:23:02] 2025-12-02 10:22:30,540 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 05:23:02] 2025-12-02 10:22:30,540 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 05:23:02] 2025-12-02 10:22:30,541 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 05:23:02] 2025-12-02 10:22:30,541 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 05:23:02] 2025-12-02 10:22:30,541 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 05:23:02] 2025-12-02 10:22:30,541 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 05:23:02] 2025-12-02 10:22:30,541 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 05:23:02] 2025-12-02 10:22:30,542 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 05:23:02] 2025-12-02 10:22:30,542 | INFO     | job 6905271032 has completed (purged errors)
[2025-12-02 05:23:02] 2025-12-02 10:22:30,542 | INFO     | overall cleanup function is called
[2025-12-02 05:23:02] 2025-12-02 10:22:31,559 | INFO     | --- collectZombieJob: --- 10, [9104]
[2025-12-02 05:23:02] 2025-12-02 10:22:31,559 | INFO     | zombie collector waiting for pid 9104
[2025-12-02 05:23:02] 2025-12-02 10:22:31,560 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 05:23:02] 2025-12-02 10:22:31,560 | INFO     | collected zombie processes
[2025-12-02 05:23:02] 2025-12-02 10:22:31,560 | INFO     | will attempt to kill all subprocesses of pid=9104
[2025-12-02 05:23:02] 2025-12-02 10:22:31,652 | INFO     | process IDs to be killed: [9104] (in reverse order)
[2025-12-02 05:23:02] 2025-12-02 10:22:31,706 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 05:23:02] 2025-12-02 10:22:31,706 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 05:23:02] 2025-12-02 10:22:31,709 | INFO     | did not find any defunct processes belonging to 9104
[2025-12-02 05:23:02] 2025-12-02 10:22:31,711 | INFO     | did not find any defunct processes belonging to 9104
[2025-12-02 05:23:02] 2025-12-02 10:22:31,713 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 05:23:02] 2025-12-02 10:22:31,713 | INFO     | ready for new job
[2025-12-02 05:23:02] 2025-12-02 10:22:31,714 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 05:23:02] 2025-12-02 10:22:31,716 | INFO     | ***************************************
[2025-12-02 05:23:02] 2025-12-02 10:22:31,716 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 05:23:02] 2025-12-02 10:22:31,716 | INFO     | ***************************************
[2025-12-02 05:23:02] 2025-12-02 10:22:31,716 | INFO     | 
[2025-12-02 05:23:02] 2025-12-02 10:22:31,717 | INFO     | architecture information:
[2025-12-02 05:23:02] 2025-12-02 10:22:31,717 | INFO     | executing command: cat /etc/os-release
[2025-12-02 05:23:02] 2025-12-02 10:22:31,733 | INFO     | cat /etc/os-release:
[2025-12-02 05:23:02] NAME="CentOS Linux"
[2025-12-02 05:23:02] VERSION="7 (Core)"
[2025-12-02 05:23:02] ID="centos"
[2025-12-02 05:23:02] ID_LIKE="rhel fedora"
[2025-12-02 05:23:02] VERSION_ID="7"
[2025-12-02 05:23:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 05:23:02] ANSI_COLOR="0;31"
[2025-12-02 05:23:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 05:23:02] HOME_URL="https://www.centos.org/"
[2025-12-02 05:23:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 05:23:02] 
[2025-12-02 05:23:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 05:23:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 05:23:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 05:23:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 05:23:02] 
[2025-12-02 05:23:02] 2025-12-02 10:22:31,733 | INFO     | ***************************************
[2025-12-02 05:23:02] 2025-12-02 10:22:32,236 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-02 05:23:02] 2025-12-02 10:22:32,253 | INFO     | sufficient remaining disk space (28531752960 B)
[2025-12-02 05:23:02] 2025-12-02 10:22:32,254 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 05:23:02] 2025-12-02 10:22:32,254 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 05:23:02] 2025-12-02 10:22:32,254 | INFO     | update_server=False
[2025-12-02 05:23:02] 2025-12-02 10:22:32,254 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 05:23:02] 2025-12-02 10:22:32,254 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 05:23:02] 2025-12-02 10:22:32,255 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 05:23:02] 2025-12-02 10:22:32,255 | INFO     | aborting loop
[2025-12-02 05:23:02] 2025-12-02 10:22:32,255 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 05:23:02] 2025-12-02 10:22:32,359 | INFO     | all data control threads have been joined
[2025-12-02 05:23:02] 2025-12-02 10:22:33,260 | INFO     | [job] retrieve thread has finished
[2025-12-02 05:23:02] 2025-12-02 10:22:33,261 | INFO     | [job] queue monitor thread has finished
[2025-12-02 05:23:02] 2025-12-02 10:22:33,261 | INFO     | [job] job monitor thread has finished
[2025-12-02 05:23:02] 2025-12-02 10:22:33,312 | INFO     | all job control threads have been joined
[2025-12-02 05:23:02] 2025-12-02 10:22:33,340 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 05:23:02] 2025-12-02 10:22:33,361 | INFO     | [data] control thread has finished
[2025-12-02 05:23:02] 2025-12-02 10:22:33,369 | INFO     | all payload control threads have been joined
[2025-12-02 05:23:02] 2025-12-02 10:22:33,416 | INFO     | [data] copytool_in thread has finished
[2025-12-02 05:23:02] 2025-12-02 10:22:33,927 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 05:23:02] 2025-12-02 10:22:34,056 | INFO     | [payload] failed_post thread has finished
[2025-12-02 05:23:02] 2025-12-02 10:22:34,142 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 05:23:02] 2025-12-02 10:22:34,168 | INFO     | [job] validate thread has finished
[2025-12-02 05:23:02] 2025-12-02 10:22:34,173 | INFO     | [payload] validate_post thread has finished
[2025-12-02 05:23:02] 2025-12-02 10:22:34,261 | INFO     | [data] copytool_out thread has finished
[2025-12-02 05:23:02] 2025-12-02 10:22:34,318 | INFO     | [job] control thread has finished
[2025-12-02 05:23:02] 2025-12-02 10:22:34,374 | INFO     | [payload] control thread has finished
[2025-12-02 05:23:02] 2025-12-02 10:22:34,574 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 05:23:02] 2025-12-02 10:22:36,782 | INFO     | [monitor] cgroup control has ended
[2025-12-02 05:23:02] 2025-12-02 10:22:37,346 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 05:23:02] 2025-12-02 10:22:42,572 | INFO     | job.realtimelogging is not enabled
[2025-12-02 05:23:02] 2025-12-02 10:22:43,577 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 05:23:02] 2025-12-02 10:22:44,457 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067759712064)>', '<ExcThread(monitor, started 140067322451712)>']
[2025-12-02 05:23:02] 2025-12-02 10:22:49,461 | INFO     | all workflow threads have been joined
[2025-12-02 05:23:02] 2025-12-02 10:22:49,461 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 05:23:02] 2025-12-02 10:22:49,461 | INFO     | traces error code: 0
[2025-12-02 05:23:02] 2025-12-02 10:22:49,462 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 05:23:02] 2025-12-02 10:23:02,525 | INFO     | PID=883 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-12-02 05:23:02] 2025-12-02 10:23:02,525 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 05:23:02] 2025-12-02 10:23:02,525 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 05:23:02] 2025-12-02 10:23:02,526 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 05:23:02] 2025-12-02 10:23:02,526 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 05:23:02] 2025-12-02 10:23:02,526 | INFO     | [monitor] control thread has ended
[2025-12-02 05:23:02] 2025-12-02 10:23:02,611 [wrapper] ==== pilot stdout END ====
[2025-12-02 05:23:02] 2025-12-02 10:23:02,615 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 05:23:02] 2025-12-02 10:23:02,619 [wrapper] pilotpid: 883
[2025-12-02 05:23:02] 2025-12-02 10:23:02,623 [wrapper] Pilot exit status: 0
[2025-12-02 05:23:02] 2025-12-02 10:23:02,635 [wrapper] pandaids: 6905271032
[2025-12-02 05:23:02] 2025-12-02 10:23:02,671 [wrapper] cleanup supervisor_pilot 24851 884
[2025-12-02 05:23:02] 2025-12-02 10:23:02,675 [wrapper] Test setup, not cleaning
[2025-12-02 05:23:02] 2025-12-02 10:23:02,679 [wrapper] apfmon messages muted
[2025-12-02 05:23:02] 2025-12-02 10:23:02,683 [wrapper] ==== wrapper stdout END ====
[2025-12-02 05:23:02] 2025-12-02 10:23:02,687 [wrapper] ==== wrapper stderr END ====
[2025-12-02 05:23:02]  *** Error codes and diagnostics ***
[2025-12-02 05:23:02]     "exeErrorCode": 0,
[2025-12-02 05:23:02]     "exeErrorDiag": "",
[2025-12-02 05:23:02]     "pilotErrorCode": 0,
[2025-12-02 05:23:02]     "pilotErrorDiag": "",
[2025-12-02 05:23:02]  *** Listing of results directory ***
[2025-12-02 05:23:02] total 1066800
[2025-12-02 05:23:02] -rwx------ 1 boincer umatlas     36292 Nov 29 19:21 runpilot2-wrapper.sh
[2025-12-02 05:23:02] -rw-r--r-- 1 boincer umatlas    576529 Nov 29 19:24 pilot3.tar.gz
[2025-12-02 05:23:02] -rw-r--r-- 1 boincer umatlas      5112 Nov 29 19:27 queuedata.json
[2025-12-02 05:23:02] -rw-r--r-- 1 boincer umatlas       100 Dec  1 23:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 05:23:02] -rwxr-xr-x 1 boincer umatlas      7986 Dec  1 23:09 run_atlas
[2025-12-02 05:23:02] -rw-r--r-- 1 boincer umatlas       105 Dec  1 23:09 job.xml
[2025-12-02 05:23:02] -rw-r--r-- 2 boincer umatlas 376354355 Dec  1 23:09 EVNT.47528871._000108.pool.root.1
[2025-12-02 05:23:02] -rw-r--r-- 2 boincer umatlas     15847 Dec  1 23:09 start_atlas.sh
[2025-12-02 05:23:02] drwxrwx--x 2 boincer umatlas      4096 Dec  1 23:09 shared
[2025-12-02 05:23:02] -rw-r--r-- 2 boincer umatlas    590139 Dec  1 23:09 input.tar.gz
[2025-12-02 05:23:02] -rw-r--r-- 1 boincer umatlas         0 Dec  1 23:09 boinc_lockfile
[2025-12-02 05:23:02] -rw-r--r-- 1 boincer umatlas      2881 Dec  1 23:09 pandaJob.out
[2025-12-02 05:23:02] -rw------- 1 boincer umatlas        57 Dec  1 23:09 setup.sh.local
[2025-12-02 05:23:02] -rw------- 1 boincer umatlas    992000 Dec  1 23:09 agis_schedconf.cvmfs.json
[2025-12-02 05:23:02] drwx------ 5 boincer umatlas      4096 Dec  1 23:10 pilot3
[2025-12-02 05:23:02] -rw-r--r-- 1 boincer umatlas       532 Dec  2 05:14 boinc_task_state.xml
[2025-12-02 05:23:02] -rw------- 1 boincer umatlas 701340508 Dec  2 05:21 HITS.47538113._002777.pool.root.1
[2025-12-02 05:23:02] -rw------- 1 boincer umatlas        95 Dec  2 05:22 pilot_heartbeat.json
[2025-12-02 05:23:02] -rw------- 1 boincer umatlas      1061 Dec  2 05:22 memory_monitor_summary.json
[2025-12-02 05:23:02] -rw------- 1 boincer umatlas   1516240 Dec  2 05:22 agis_ddmendpoints.agis.ALL.json
[2025-12-02 05:23:02] -rw------- 1 boincer umatlas   2223148 Dec  2 05:22 log.47538113._002777.job.log.tgz.1
[2025-12-02 05:23:02] -rw------- 1 boincer umatlas     27632 Dec  2 05:22 heartbeat.json
[2025-12-02 05:23:02] -rw-r--r-- 1 boincer umatlas      5956 Dec  2 05:22 init_data.xml
[2025-12-02 05:23:02] -rw-r--r-- 1 boincer umatlas      8192 Dec  2 05:23 boinc_mmap_file
[2025-12-02 05:23:02] -rw-r--r-- 1 boincer umatlas        29 Dec  2 05:23 wrapper_checkpoint.txt
[2025-12-02 05:23:02] -rw------- 1 boincer umatlas       743 Dec  2 05:23 pilotlog.txt
[2025-12-02 05:23:02] -rw------- 1 boincer umatlas   3153115 Dec  2 05:23 log.47538113._002777.job.log.1
[2025-12-02 05:23:02] -rw------- 1 boincer umatlas       353 Dec  2 05:23 output.list
[2025-12-02 05:23:02] -rw-r--r-- 1 boincer umatlas       620 Dec  2 05:23 runtime_log
[2025-12-02 05:23:02] -rw------- 1 boincer umatlas   5416960 Dec  2 05:23 result.tar.gz
[2025-12-02 05:23:02] -rw-r--r-- 1 boincer umatlas      9345 Dec  2 05:23 runtime_log.err
[2025-12-02 05:23:02] -rw------- 1 boincer umatlas       670 Dec  2 05:23 cJ3MDmDNkj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnJMKDmwBDrpn.diag
[2025-12-02 05:23:02] -rw-r--r-- 1 boincer umatlas     21290 Dec  2 05:23 stderr.txt
[2025-12-02 05:23:02] HITS file was successfully produced:
[2025-12-02 05:23:02] -rw------- 1 boincer umatlas 701340508 Dec  2 05:21 shared/HITS.pool.root.1
[2025-12-02 05:23:02]  *** Contents of shared directory: ***
[2025-12-02 05:23:02] total 1058336
[2025-12-02 05:23:02] -rw-r--r-- 2 boincer umatlas 376354355 Dec  1 23:09 ATLAS.root_0
[2025-12-02 05:23:02] -rw-r--r-- 2 boincer umatlas     15847 Dec  1 23:09 start_atlas.sh
[2025-12-02 05:23:02] -rw-r--r-- 2 boincer umatlas    590139 Dec  1 23:09 input.tar.gz
[2025-12-02 05:23:02] -rw------- 1 boincer umatlas 701340508 Dec  2 05:21 HITS.pool.root.1
[2025-12-02 05:23:02] -rw------- 1 boincer umatlas   5416960 Dec  2 05:23 result.tar.gz
05:23:04 (29650): run_atlas exited; CPU time 247074.135951
05:23:04 (29650): called boinc_finish(0)

</stderr_txt>
]]>

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