Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:07:16 (1938352): wrapper (7.7.26015): starting
00:07:16 (1938352): wrapper: running run_atlas (--nthreads 9)
[2025-12-02 00:07:16] Arguments: --nthreads 9
[2025-12-02 00:07:16] Threads: 9
[2025-12-02 00:07:16] Checking for CVMFS
[2025-12-02 00:07:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 00:07:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 00:07:16] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 00:07:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 00:07:16] 2.13.3.0 4548 1931 87500 153544 2 101 5600429 37030913 1860 16776704 0 2336946 99.684 756022 48221 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-02 00:07:16] CVMFS is ok
[2025-12-02 00:07:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 00:07:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 00:07:16] Further information can be found at the LHC@home message board.
[2025-12-02 00:07:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 00:07:16] Checking for apptainer binary...
[2025-12-02 00:07:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 00:07:16] Running /usr/bin/apptainer --version
[2025-12-02 00:07:16] apptainer version 1.4.4-1.el9
[2025-12-02 00:07:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 00:07:16] c-205-36.aglt2.org
[2025-12-02 00:07:16] apptainer works
[2025-12-02 00:07:16] Set ATHENA_PROC_NUMBER=9
[2025-12-02 00:07:16] Set ATHENA_CORE_NUMBER=9
[2025-12-02 00:07:16] Starting ATLAS job with PandaID=6905295232
[2025-12-02 00:07:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 07:14:09]  *** The last 200 lines of the pilot log: ***
[2025-12-02 07:14:09] 2025-12-02 12:13:19,725 | INFO     | 25557s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-02 07:14:09] 2025-12-02 12:13:19,974 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 07:14:09] 2025-12-02 12:13:19,980 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2637.5271562499993
[2025-12-02 07:14:09] 2025-12-02 12:13:19,987 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6905295232/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 07:14:09] 2025-12-02 12:13:19,988 | INFO     | extracted standard info from prmon json
[2025-12-02 07:14:09] 2025-12-02 12:13:19,988 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 07:14:09] 2025-12-02 12:13:19,988 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 07:14:09] 2025-12-02 12:13:19,997 | INFO     | fitting pss+swap vs Time
[2025-12-02 07:14:09] 2025-12-02 12:13:19,998 | INFO     | sum of square deviations: 22809401969.85215
[2025-12-02 07:14:09] 2025-12-02 12:13:20,003 | INFO     | sum of deviations: 369713638537.99286
[2025-12-02 07:14:09] 2025-12-02 12:13:20,003 | INFO     | mean x: 1764664817.071599
[2025-12-02 07:14:09] 2025-12-02 12:13:20,003 | INFO     | mean y: 3596672.1002386636
[2025-12-02 07:14:09] 2025-12-02 12:13:20,003 | INFO     | intersect: -28599549135.13512
[2025-12-02 07:14:09] 2025-12-02 12:13:20,004 | INFO     | chi2: 5.02087861650833
[2025-12-02 07:14:09] 2025-12-02 12:13:20,005 | INFO     | sum of square deviations: 22002540177.32606
[2025-12-02 07:14:09] 2025-12-02 12:13:20,009 | INFO     | sum of deviations: 535104659983.2318
[2025-12-02 07:14:09] 2025-12-02 12:13:20,009 | INFO     | mean x: 1764664664.5724638
[2025-12-02 07:14:09] 2025-12-02 12:13:20,010 | INFO     | mean y: 3627874.7922705314
[2025-12-02 07:14:09] 2025-12-02 12:13:20,010 | INFO     | intersect: -42913247981.82208
[2025-12-02 07:14:09] 2025-12-02 12:13:20,010 | INFO     | chi2: 1.9572939803301983
[2025-12-02 07:14:09] 2025-12-02 12:13:20,011 | INFO     | current chi2=1.9572939803301983 (change=61.016903019827254 %)
[2025-12-02 07:14:09] 2025-12-02 12:13:20,011 | INFO     | sum of square deviations: 21214934559.79959
[2025-12-02 07:14:09] 2025-12-02 12:13:20,016 | INFO     | sum of deviations: 534102599908.6869
[2025-12-02 07:14:09] 2025-12-02 12:13:20,016 | INFO     | mean x: 1764664512.0733497
[2025-12-02 07:14:09] 2025-12-02 12:13:20,016 | INFO     | mean y: 3627659.9437652812
[2025-12-02 07:14:09] 2025-12-02 12:13:20,016 | INFO     | intersect: -44423184084.78565
[2025-12-02 07:14:09] 2025-12-02 12:13:20,017 | INFO     | chi2: 1.9094991857825239
[2025-12-02 07:14:09] 2025-12-02 12:13:20,017 | INFO     | current chi2=1.9094991857825239 (change=2.441881241550203 %)
[2025-12-02 07:14:09] 2025-12-02 12:13:20,017 | INFO     | right removable region: 408
[2025-12-02 07:14:09] 2025-12-02 12:13:20,018 | INFO     | sum of square deviations: 22002521877.326065
[2025-12-02 07:14:09] 2025-12-02 12:13:20,022 | INFO     | sum of deviations: 249854544574.1302
[2025-12-02 07:14:09] 2025-12-02 12:13:20,022 | INFO     | mean x: 1764664969.5724638
[2025-12-02 07:14:09] 2025-12-02 12:13:20,022 | INFO     | mean y: 3619229.362318841
[2025-12-02 07:14:09] 2025-12-02 12:13:20,022 | INFO     | intersect: -20035427419.777172
[2025-12-02 07:14:09] 2025-12-02 12:13:20,023 | INFO     | chi2: 3.193424053245469
[2025-12-02 07:14:09] 2025-12-02 12:13:20,023 | INFO     | current chi2=3.193424053245469 (change=36.397107017371546 %)
[2025-12-02 07:14:09] 2025-12-02 12:13:20,024 | INFO     | sum of square deviations: 21214897959.799595
[2025-12-02 07:14:09] 2025-12-02 12:13:20,028 | INFO     | sum of deviations: 222937824318.73367
[2025-12-02 07:14:09] 2025-12-02 12:13:20,028 | INFO     | mean x: 1764665122.0733497
[2025-12-02 07:14:09] 2025-12-02 12:13:20,029 | INFO     | mean y: 3624438.975550122
[2025-12-02 07:14:09] 2025-12-02 12:13:20,029 | INFO     | intersect: -18540447925.250023
[2025-12-02 07:14:09] 2025-12-02 12:13:20,029 | INFO     | chi2: 3.169813261832897
[2025-12-02 07:14:09] 2025-12-02 12:13:20,029 | INFO     | current chi2=3.169813261832897 (change=0.7393565971477062 %)
[2025-12-02 07:14:09] 2025-12-02 12:13:20,030 | INFO     | left removable region: 20
[2025-12-02 07:14:09] 2025-12-02 12:13:20,030 | INFO     | sum of square deviations: 18111946726.680458
[2025-12-02 07:14:09] 2025-12-02 12:13:20,034 | INFO     | sum of deviations: 343289847090.9793
[2025-12-02 07:14:09] 2025-12-02 12:13:20,034 | INFO     | mean x: 1764665091.5773196
[2025-12-02 07:14:09] 2025-12-02 12:13:20,034 | INFO     | mean y: 3665104.8840206186
[2025-12-02 07:14:09] 2025-12-02 12:13:20,035 | INFO     | intersect: -33443408177.524864
[2025-12-02 07:14:09] 2025-12-02 12:13:20,035 | INFO     | chi2: 0.007622991897315408
[2025-12-02 07:14:09] 2025-12-02 12:13:20,035 | INFO     | current memory leak: 18.95 B/s (using 388 data points, chi2=0.01)
[2025-12-02 07:14:09] 2025-12-02 12:13:20,036 | INFO     | could have reported an average CPU frequency of 2622 MHz (18 samples)
[2025-12-02 07:14:09] 2025-12-02 12:13:20,036 | INFO     | ..............................
[2025-12-02 07:14:09] 2025-12-02 12:13:20,037 | INFO     | . Timing measurements:
[2025-12-02 07:14:09] 2025-12-02 12:13:20,037 | INFO     | . get job = 0 s
[2025-12-02 07:14:09] 2025-12-02 12:13:20,037 | INFO     | . initial setup = 2 s
[2025-12-02 07:14:09] 2025-12-02 12:13:20,037 | INFO     | . payload setup = 6 s
[2025-12-02 07:14:09] 2025-12-02 12:13:20,037 | INFO     | . stage-in = 0 s
[2025-12-02 07:14:09] 2025-12-02 12:13:20,037 | INFO     | . payload execution = 25519 s
[2025-12-02 07:14:09] 2025-12-02 12:13:20,037 | INFO     | . stage-out = 3 s
[2025-12-02 07:14:09] 2025-12-02 12:13:20,037 | INFO     | . log creation = 0 s
[2025-12-02 07:14:09] 2025-12-02 12:13:20,038 | INFO     | ..............................
[2025-12-02 07:14:09] 2025-12-02 12:13:20,434 | INFO     | 
[2025-12-02 07:14:09] 2025-12-02 12:13:20,434 | INFO     | job summary report
[2025-12-02 07:14:09] 2025-12-02 12:13:20,435 | INFO     | --------------------------------------------------
[2025-12-02 07:14:09] 2025-12-02 12:13:20,435 | INFO     | PanDA job id: 6905295232
[2025-12-02 07:14:09] 2025-12-02 12:13:20,435 | INFO     | task id: 47538113
[2025-12-02 07:14:09] 2025-12-02 12:13:20,435 | INFO     | errors: (none)
[2025-12-02 07:14:09] 2025-12-02 12:13:20,435 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 07:14:09] 2025-12-02 12:13:20,435 | INFO     | pilot state: finished 
[2025-12-02 07:14:09] 2025-12-02 12:13:20,435 | INFO     | transexitcode: 0
[2025-12-02 07:14:09] 2025-12-02 12:13:20,435 | INFO     | exeerrorcode: 0
[2025-12-02 07:14:09] 2025-12-02 12:13:20,436 | INFO     | exeerrordiag: 
[2025-12-02 07:14:09] 2025-12-02 12:13:20,436 | INFO     | exitcode: 0
[2025-12-02 07:14:09] 2025-12-02 12:13:20,436 | INFO     | exitmsg: OK
[2025-12-02 07:14:09] 2025-12-02 12:13:20,436 | INFO     | cpuconsumptiontime: 225383 s
[2025-12-02 07:14:09] 2025-12-02 12:13:20,436 | INFO     | nevents: 1000
[2025-12-02 07:14:09] 2025-12-02 12:13:20,436 | INFO     | neventsw: 0
[2025-12-02 07:14:09] 2025-12-02 12:13:20,436 | INFO     | pid: 1950328
[2025-12-02 07:14:09] 2025-12-02 12:13:20,436 | INFO     | pgrp: 1950328
[2025-12-02 07:14:09] 2025-12-02 12:13:20,436 | INFO     | corecount: 9
[2025-12-02 07:14:09] 2025-12-02 12:13:20,436 | INFO     | event service: False
[2025-12-02 07:14:09] 2025-12-02 12:13:20,437 | INFO     | sizes: {0: 2284177, 1: 2284432, 3: 2284694, 11: 2284722, 25530: 2341895, 25534: 2350889, 25536: 2351073, 25542: 2351319}
[2025-12-02 07:14:09] 2025-12-02 12:13:20,437 | INFO     | --------------------------------------------------
[2025-12-02 07:14:09] 2025-12-02 12:13:20,437 | INFO     | 
[2025-12-02 07:14:09] 2025-12-02 12:13:20,437 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-02 07:14:09] 2025-12-02 12:13:20,453 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 07:14:09] 2025-12-02 12:13:20,454 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 07:14:09] 2025-12-02 12:13:20,454 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 07:14:09] 2025-12-02 12:13:20,454 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 07:14:09] 2025-12-02 12:13:20,454 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 07:14:09] 2025-12-02 12:13:20,454 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 07:14:09] 2025-12-02 12:13:20,454 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 07:14:09] 2025-12-02 12:13:20,454 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 07:14:09] 2025-12-02 12:13:20,455 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 07:14:09] 2025-12-02 12:13:20,455 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 07:14:09] 2025-12-02 12:13:20,455 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 07:14:09] 2025-12-02 12:13:20,455 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 07:14:09] 2025-12-02 12:13:20,455 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 07:14:09] 2025-12-02 12:13:20,455 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 07:14:09] 2025-12-02 12:13:20,455 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 07:14:09] 2025-12-02 12:13:20,455 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 07:14:09] 2025-12-02 12:13:20,456 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 07:14:09] 2025-12-02 12:13:20,456 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 07:14:09] 2025-12-02 12:13:20,456 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 07:14:09] 2025-12-02 12:13:20,456 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 07:14:09] 2025-12-02 12:13:20,456 | INFO     | job 6905295232 has completed (purged errors)
[2025-12-02 07:14:09] 2025-12-02 12:13:20,456 | INFO     | overall cleanup function is called
[2025-12-02 07:14:09] 2025-12-02 12:13:21,473 | INFO     | --- collectZombieJob: --- 10, [1950328]
[2025-12-02 07:14:09] 2025-12-02 12:13:21,473 | INFO     | zombie collector waiting for pid 1950328
[2025-12-02 07:14:09] 2025-12-02 12:13:21,473 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 07:14:09] 2025-12-02 12:13:21,474 | INFO     | collected zombie processes
[2025-12-02 07:14:09] 2025-12-02 12:13:21,474 | INFO     | will attempt to kill all subprocesses of pid=1950328
[2025-12-02 07:14:09] 2025-12-02 12:13:21,674 | INFO     | process IDs to be killed: [1950328] (in reverse order)
[2025-12-02 07:14:09] 2025-12-02 12:13:21,731 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 07:14:09] 2025-12-02 12:13:21,732 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 07:14:09] 2025-12-02 12:13:21,737 | INFO     | did not find any defunct processes belonging to 1950328
[2025-12-02 07:14:09] 2025-12-02 12:13:21,742 | INFO     | did not find any defunct processes belonging to 1950328
[2025-12-02 07:14:09] 2025-12-02 12:13:21,743 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 07:14:09] 2025-12-02 12:13:21,744 | INFO     | ready for new job
[2025-12-02 07:14:09] 2025-12-02 12:13:21,744 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 07:14:09] 2025-12-02 12:13:21,747 | INFO     | ***************************************
[2025-12-02 07:14:09] 2025-12-02 12:13:21,747 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 07:14:09] 2025-12-02 12:13:21,747 | INFO     | ***************************************
[2025-12-02 07:14:09] 2025-12-02 12:13:21,747 | INFO     | 
[2025-12-02 07:14:09] 2025-12-02 12:13:21,749 | INFO     | architecture information:
[2025-12-02 07:14:09] 2025-12-02 12:13:21,750 | INFO     | executing command: cat /etc/os-release
[2025-12-02 07:14:09] 2025-12-02 12:13:21,762 | INFO     | cat /etc/os-release:
[2025-12-02 07:14:09] NAME="CentOS Linux"
[2025-12-02 07:14:09] VERSION="7 (Core)"
[2025-12-02 07:14:09] ID="centos"
[2025-12-02 07:14:09] ID_LIKE="rhel fedora"
[2025-12-02 07:14:09] VERSION_ID="7"
[2025-12-02 07:14:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 07:14:09] ANSI_COLOR="0;31"
[2025-12-02 07:14:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 07:14:09] HOME_URL="https://www.centos.org/"
[2025-12-02 07:14:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 07:14:09] 
[2025-12-02 07:14:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 07:14:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 07:14:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 07:14:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 07:14:09] 
[2025-12-02 07:14:09] 2025-12-02 12:13:21,763 | INFO     | ***************************************
[2025-12-02 07:14:09] 2025-12-02 12:13:22,265 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-02 07:14:09] 2025-12-02 12:13:22,279 | INFO     | sufficient remaining disk space (39450574848 B)
[2025-12-02 07:14:09] 2025-12-02 12:13:22,280 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 07:14:09] 2025-12-02 12:13:22,280 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 07:14:09] 2025-12-02 12:13:22,280 | INFO     | update_server=False
[2025-12-02 07:14:09] 2025-12-02 12:13:22,280 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 07:14:09] 2025-12-02 12:13:22,472 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 07:14:09] 2025-12-02 12:13:22,578 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-02 07:14:09] 2025-12-02 12:13:22,578 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-02 07:14:09] 2025-12-02 12:13:22,579 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 07:14:09] 2025-12-02 12:13:22,579 | INFO     | will abort loop
[2025-12-02 07:14:09] 2025-12-02 12:13:22,698 | INFO     | all data control threads have been joined
[2025-12-02 07:14:09] 2025-12-02 12:13:22,801 | INFO     | all payload control threads have been joined
[2025-12-02 07:14:09] 2025-12-02 12:13:23,116 | INFO     | all job control threads have been joined
[2025-12-02 07:14:09] 2025-12-02 12:13:23,285 | INFO     | [job] retrieve thread has finished
[2025-12-02 07:14:09] 2025-12-02 12:13:23,348 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 07:14:09] 2025-12-02 12:13:23,584 | INFO     | [job] job monitor thread has finished
[2025-12-02 07:14:09] 2025-12-02 12:13:23,703 | INFO     | [data] control thread has finished
[2025-12-02 07:14:09] 2025-12-02 12:13:23,720 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 07:14:09] 2025-12-02 12:13:23,780 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 07:14:09] 2025-12-02 12:13:23,806 | INFO     | [payload] control thread has finished
[2025-12-02 07:14:09] 2025-12-02 12:13:23,990 | INFO     | [job] validate thread has finished
[2025-12-02 07:14:09] 2025-12-02 12:13:24,084 | INFO     | [data] copytool_in thread has finished
[2025-12-02 07:14:09] 2025-12-02 12:13:24,122 | INFO     | [job] control thread has finished
[2025-12-02 07:14:09] 2025-12-02 12:13:24,320 | INFO     | [payload] failed_post thread has finished
[2025-12-02 07:14:09] 2025-12-02 12:13:24,343 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 07:14:09] 2025-12-02 12:13:24,419 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 07:14:09] 2025-12-02 12:13:24,477 | INFO     | [data] copytool_out thread has finished
[2025-12-02 07:14:09] 2025-12-02 12:13:24,888 | INFO     | [payload] validate_post thread has finished
[2025-12-02 07:14:09] 2025-12-02 12:13:25,166 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 07:14:09] 2025-12-02 12:13:26,171 | INFO     | [job] queue monitor thread has finished
[2025-12-02 07:14:09] 2025-12-02 12:13:28,424 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 07:14:09] 2025-12-02 12:13:53,042 | INFO     | PID=1942223 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 07:14:09] 2025-12-02 12:13:53,042 | INFO     | .. there are 3 such processes running
[2025-12-02 07:14:09] 2025-12-02 12:13:53,043 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 07:14:09] 2025-12-02 12:13:53,043 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 07:14:09] 2025-12-02 12:13:53,043 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 07:14:09] 2025-12-02 12:14:03,941 | INFO     | [monitor] cgroup control has ended
[2025-12-02 07:14:09] 2025-12-02 12:14:04,016 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140438649161536)>', '<ExcThread(monitor, started 140438149248768)>']
[2025-12-02 07:14:09] 2025-12-02 12:14:04,098 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 07:14:09] 2025-12-02 12:14:04,098 | INFO     | [monitor] control thread has ended
[2025-12-02 07:14:09] 2025-12-02 12:14:09,041 | INFO     | all workflow threads have been joined
[2025-12-02 07:14:09] 2025-12-02 12:14:09,042 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 07:14:09] 2025-12-02 12:14:09,042 | INFO     | traces error code: 0
[2025-12-02 07:14:09] 2025-12-02 12:14:09,042 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 07:14:09] 2025-12-02 12:14:09,159 [wrapper] ==== pilot stdout END ====
[2025-12-02 07:14:09] 2025-12-02 12:14:09,162 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 07:14:09] 2025-12-02 12:14:09,164 [wrapper] pilotpid: 1942223
[2025-12-02 07:14:09] 2025-12-02 12:14:09,167 [wrapper] Pilot exit status: 0
[2025-12-02 07:14:09] 2025-12-02 12:14:09,175 [wrapper] pandaids: 6905295232
[2025-12-02 07:14:09] 2025-12-02 12:14:09,219 [wrapper] cleanup supervisor_pilot 2350892 1942224
[2025-12-02 07:14:09] 2025-12-02 12:14:09,221 [wrapper] Test setup, not cleaning
[2025-12-02 07:14:09] 2025-12-02 12:14:09,224 [wrapper] apfmon messages muted
[2025-12-02 07:14:09] 2025-12-02 12:14:09,226 [wrapper] ==== wrapper stdout END ====
[2025-12-02 07:14:09] 2025-12-02 12:14:09,228 [wrapper] ==== wrapper stderr END ====
[2025-12-02 07:14:09]  *** Error codes and diagnostics ***
[2025-12-02 07:14:09]     "exeErrorCode": 0,
[2025-12-02 07:14:09]     "exeErrorDiag": "",
[2025-12-02 07:14:09]     "pilotErrorCode": 0,
[2025-12-02 07:14:09]     "pilotErrorDiag": "",
[2025-12-02 07:14:09]  *** Listing of results directory ***
[2025-12-02 07:14:09] total 1059772
[2025-12-02 07:14:09] -rwx------. 1 boincer umatlas     36292 Nov 29 19:21 runpilot2-wrapper.sh
[2025-12-02 07:14:09] -rw-r--r--. 1 boincer umatlas    576529 Nov 29 19:24 pilot3.tar.gz
[2025-12-02 07:14:09] -rw-r--r--. 1 boincer umatlas      5112 Nov 29 19:27 queuedata.json
[2025-12-02 07:14:09] -rw-r--r--. 1 boincer umatlas       100 Dec  2 00:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 07:14:09] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 00:07 run_atlas
[2025-12-02 07:14:09] -rw-r--r--. 1 boincer umatlas       105 Dec  2 00:07 job.xml
[2025-12-02 07:14:09] -rw-r--r--. 2 boincer umatlas 376354391 Dec  2 00:07 EVNT.47528871._000129.pool.root.1
[2025-12-02 07:14:09] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 00:07 start_atlas.sh
[2025-12-02 07:14:09] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 00:07 shared
[2025-12-02 07:14:09] -rw-r--r--. 2 boincer umatlas    590136 Dec  2 00:07 input.tar.gz
[2025-12-02 07:14:09] -rw-r--r--. 1 boincer umatlas         0 Dec  2 00:07 boinc_lockfile
[2025-12-02 07:14:09] -rw-r--r--. 1 boincer umatlas      2881 Dec  2 00:07 pandaJob.out
[2025-12-02 07:14:09] -rw-------. 1 boincer umatlas    992001 Dec  2 00:07 agis_schedconf.cvmfs.json
[2025-12-02 07:14:09] drwx------. 5 boincer umatlas      4096 Dec  2 00:07 pilot3
[2025-12-02 07:14:09] -rw-r--r--. 1 boincer umatlas       533 Dec  2 07:05 boinc_task_state.xml
[2025-12-02 07:14:09] -rw-r--r--. 1 boincer umatlas      6527 Dec  2 07:11 init_data.xml
[2025-12-02 07:14:09] -rw-------. 1 boincer umatlas 693709067 Dec  2 07:12 HITS.47538113._002984.pool.root.1
[2025-12-02 07:14:09] -rw-------. 1 boincer umatlas      1050 Dec  2 07:13 memory_monitor_summary.json
[2025-12-02 07:14:09] -rw-------. 1 boincer umatlas   1516240 Dec  2 07:13 agis_ddmendpoints.agis.ALL.json
[2025-12-02 07:14:09] -rw-------. 1 boincer umatlas   1914810 Dec  2 07:13 log.47538113._002984.job.log.tgz.1
[2025-12-02 07:14:09] -rw-------. 1 boincer umatlas        95 Dec  2 07:13 pilot_heartbeat.json
[2025-12-02 07:14:09] -rw-------. 1 boincer umatlas     29131 Dec  2 07:13 heartbeat.json
[2025-12-02 07:14:09] -rw-r--r--. 1 boincer umatlas      8192 Dec  2 07:14 boinc_mmap_file
[2025-12-02 07:14:09] -rw-r--r--. 1 boincer umatlas        29 Dec  2 07:14 wrapper_checkpoint.txt
[2025-12-02 07:14:09] -rw-------. 1 boincer umatlas      5009 Dec  2 07:14 pilotlog.txt
[2025-12-02 07:14:09] -rw-------. 1 boincer umatlas   3675674 Dec  2 07:14 log.47538113._002984.job.log.1
[2025-12-02 07:14:09] -rw-------. 1 boincer umatlas       353 Dec  2 07:14 output.list
[2025-12-02 07:14:09] -rw-r--r--. 1 boincer umatlas       620 Dec  2 07:14 runtime_log
[2025-12-02 07:14:09] -rw-------. 1 boincer umatlas   5632000 Dec  2 07:14 result.tar.gz
[2025-12-02 07:14:09] -rw-r--r--. 1 boincer umatlas      8818 Dec  2 07:14 runtime_log.err
[2025-12-02 07:14:09] -rw-------. 1 boincer umatlas       659 Dec  2 07:14 P2FMDmDNkj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRbPKDm857eRm.diag
[2025-12-02 07:14:09] -rw-r--r--. 1 boincer umatlas     21325 Dec  2 07:14 stderr.txt
[2025-12-02 07:14:09] HITS file was successfully produced:
[2025-12-02 07:14:09] -rw-------. 1 boincer umatlas 693709067 Dec  2 07:12 shared/HITS.pool.root.1
[2025-12-02 07:14:09]  *** Contents of shared directory: ***
[2025-12-02 07:14:09] total 1051092
[2025-12-02 07:14:09] -rw-r--r--. 2 boincer umatlas 376354391 Dec  2 00:07 ATLAS.root_0
[2025-12-02 07:14:09] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 00:07 start_atlas.sh
[2025-12-02 07:14:09] -rw-r--r--. 2 boincer umatlas    590136 Dec  2 00:07 input.tar.gz
[2025-12-02 07:14:09] -rw-------. 1 boincer umatlas 693709067 Dec  2 07:12 HITS.pool.root.1
[2025-12-02 07:14:09] -rw-------. 1 boincer umatlas   5632000 Dec  2 07:14 result.tar.gz
07:14:11 (1938352): run_atlas exited; CPU time 225592.022657
07:14:11 (1938352): called boinc_finish(0)

</stderr_txt>
]]>

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