| Name | d6ENDmtMkj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2XPKDmSqf9Sm_1 |
| Workunit | 237790605 |
| Created | 1 Dec 2025, 2:16:47 UTC |
| Sent | 2 Dec 2025, 4:15:45 UTC |
| Report deadline | 10 Dec 2025, 4:15:45 UTC |
| Received | 2 Dec 2025, 9:28:23 UTC |
| Server state | Over |
| Outcome | Validate error |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 10687303 |
| Run time | 6 min 20 sec |
| CPU time | 1 min 2 sec |
| Validate state | Invalid |
| Credit | 0.00 |
| Device peak FLOPS | 64.66 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 710.24 MB |
| Peak swap size | 1.54 GB |
| Peak disk usage | 726.52 MB |
Stderr output
<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
03:45:51 (304586): wrapper (7.7.26015): starting
03:45:51 (304586): wrapper: running run_atlas (--nthreads 12)
[2025-12-02 03:45:51] Arguments: --nthreads 12
[2025-12-02 03:45:51] Threads: 12
[2025-12-02 03:45:51] Checking for CVMFS
[2025-12-02 03:45:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 03:45:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 03:45:51] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 03:45:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 03:45:52] 2.12.7.0 43987 271 54076 153549 3 107 3703306 4194305 0 130560 0 590333 99.992 12982 59 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://131.225.189.146:3126 1
[2025-12-02 03:45:52] CVMFS is ok
[2025-12-02 03:45:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 03:45:52] Checking for apptainer binary...
[2025-12-02 03:45:52] apptainer is not installed, using version from CVMFS
[2025-12-02 03:45:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 03:45:52] Trebeth
[2025-12-02 03:45:52] apptainer works
[2025-12-02 03:45:52] Set ATHENA_PROC_NUMBER=12
[2025-12-02 03:45:52] Set ATHENA_CORE_NUMBER=12
[2025-12-02 03:45:52] Starting ATLAS job with PandaID=6905333404
[2025-12-02 03:45:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 03:52:07] *** The last 200 lines of the pilot log: ***
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | ..............................
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | . Timing measurements:
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | . get job = 0 s
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | . initial setup = 61 s
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | . payload setup = 9 s
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | . stage-in = 0 s
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | . payload execution = 103 s
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | . stage-out = 0 s
[2025-12-02 03:52:07] 2025-12-02 08:51:16,266 | INFO | . log creation = 0 s
[2025-12-02 03:52:07] 2025-12-02 08:51:16,266 | INFO | ..............................
[2025-12-02 03:52:07] 2025-12-02 08:51:16,266 | INFO | building log extracts (sent to the server as 'pilotLog')
[2025-12-02 03:52:07] 2025-12-02 08:51:16,266 | INFO | executing command: tail -n 20 /var/lib/boinc-client/slots/4/PanDA_Pilot-6905333404/pilotlog.txt
[2025-12-02 03:52:07] 2025-12-02 08:51:16,278 | WARNING | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-02 03:52:07] - Log from pilotlog.txt -
[2025-12-02 03:52:07] 2025-12-02 08:51:16,259 | INFO | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6905333404/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 03:52:07] 2025-12-02 08:51:16,260 | INFO | extracted standard info from prmon json
[2025-12-02 03:52:07] 2025-12-02 08:51:16,260 | INFO | extracted standard memory fields from prmon json
[2025-12-02 03:52:07] 2025-12-02 08:51:16,260 | WARNING | GPU info not found in prmon json: 'gpu'
[2025-12-02 03:52:07] 2025-12-02 08:51:16,261 | WARNING | format EVNTtoHITS has no such key: dbData
[2025-12-02 03:52:07] 2025-12-02 08:51:16,261 | WARNING | format EVNTtoHITS has no such key: dbTime
[2025-12-02 03:52:07] 2025-12-02 08:51:16,263 | WARNING | wrong length of table data, x=[1764665249.0, 1764665310.0], y=[929.0, 389375.0] (must be same and length>=4)
[2025-12-02 03:52:07] 2025-12-02 08:51:16,264 | INFO | could have reported an average CPU frequency of 1441 MHz (4 samples)
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | ..............................
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | . Timing measurements:
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | . get job = 0 s
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | . initial setup = 61 s
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | . payload setup = 9 s
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | . stage-in = 0 s
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | . payload execution = 103 s
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | . stage-out = 0 s
[2025-12-02 03:52:07] 2025-12-02 08:51:16,266 | INFO | . log creation = 0 s
[2025-12-02 03:52:07] 2025-12-02 08:51:16,266 | INFO | ..............................
[2025-12-02 03:52:07] 2025-12-02 08:51:16,266 | INFO | building log extracts (sent to the server as 'pilotLog')
[2025-12-02 03:52:07] 2025-12-02 08:51:16,266 | INFO | executing command: tail -n 20 /var/lib/boinc-client/slots/4/PanDA_Pilot-6905333404/pilotlog.txt
[2025-12-02 03:52:07] 2025-12-02 08:51:16,278 | WARNING |
[2025-12-02 03:52:07] [begin log extracts]
[2025-12-02 03:52:07] - Log from pilotlog.txt -
[2025-12-02 03:52:07] 2025-12-02 08:51:16,259 | INFO | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6905333404/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 03:52:07] 2025-12-02 08:51:16,260 | INFO | extracted standard info from prmon json
[2025-12-02 03:52:07] 2025-12-02 08:51:16,260 | INFO | extracted standard memory fields from prmon json
[2025-12-02 03:52:07] 2025-12-02 08:51:16,260 | WARNING | GPU info not found in prmon json: 'gpu'
[2025-12-02 03:52:07] 2025-12-02 08:51:16,261 | WARNING | format EVNTtoHITS has no such key: dbData
[2025-12-02 03:52:07] 2025-12-02 08:51:16,261 | WARNING | format EVNTtoHITS has no such key: dbTime
[2025-12-02 03:52:07] 2025-12-02 08:51:16,263 | WARNING | wrong length of table data, x=[1764665249.0, 1764665310.0], y=[929.0, 389375.0] (must be same and length>=4)
[2025-12-02 03:52:07] 2025-12-02 08:51:16,264 | INFO | could have reported an average CPU frequency of 1441 MHz (4 samples)
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | ..............................
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | . Timing measurements:
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | . get job = 0 s
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | . initial setup = 61 s
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | . payload setup = 9 s
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | . stage-in = 0 s
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | . payload execution = 103 s
[2025-12-02 03:52:07] 2025-12-02 08:51:16,265 | INFO | . stage-out = 0 s
[2025-12-02 03:52:07] 2025-12-02 08:51:16,266 | INFO | . log creation = 0 s
[2025-12-02 03:52:07] 2025-12-02 08:51:16,266 | INFO | ..............................
[2025-12-02 03:52:07] 2025-12-02 08:51:16,266 | INFO | building log extracts (sent to the server as 'pilotLog')
[2025-12-02 03:52:07] 2025-12-02 08:51:16,266 | INFO | executing command: tail -n 20 /var/lib/boinc-client/slots/4/PanDA_Pilot-6905333404/pilotlog.txt
[2025-12-02 03:52:07] [end log extracts]
[2025-12-02 03:52:07] 2025-12-02 08:51:16,279 | WARNING | pilotErrorCodes = [1305, 1165, 1328] (will report primary/first error code)
[2025-12-02 03:52:07] 2025-12-02 08:51:16,280 | WARNING | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a
[2025-12-02 03:52:07] 2025-12-02 08:51:16,335 | INFO |
[2025-12-02 03:52:07] 2025-12-02 08:51:16,336 | INFO | job summary report
[2025-12-02 03:52:07] 2025-12-02 08:51:16,336 | INFO | --------------------------------------------------
[2025-12-02 03:52:07] 2025-12-02 08:51:16,336 | INFO | PanDA job id: 6905333404
[2025-12-02 03:52:07] 2025-12-02 08:51:16,336 | INFO | task id: 47530725
[2025-12-02 03:52:07] 2025-12-02 08:51:16,336 | INFO | error 1/3: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-02 03:49:05,112 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-02 03:52:07] 2025-12-02 08:51:16,336 | INFO | error 2/3: 1165: Local output file is missing
[2025-12-02 03:52:07] 2025-12-02 08:51:16,336 | INFO | error 3/3: 1328: Invalid memory reference or a segmentation fault in payload: EVNTtoHITS got a SIGSEGV signal (exit code 139) (job report)
[2025-12-02 03:52:07] 2025-12-02 08:51:16,337 | INFO | pilot error code: 1328
[2025-12-02 03:52:07] 2025-12-02 08:51:16,337 | INFO | pilot error diag: Invalid memory reference or a segmentation fault in payload: EVNTtoHITS got a SIGSEGV signal (exit code 139) (job report)
[2025-12-02 03:52:07] 2025-12-02 08:51:16,337 | INFO | status: LOG_TRANSFER = DONE
[2025-12-02 03:52:07] 2025-12-02 08:51:16,337 | INFO | pilot state: failed
[2025-12-02 03:52:07] 2025-12-02 08:51:16,337 | INFO | transexitcode: 65
[2025-12-02 03:52:07] 2025-12-02 08:51:16,337 | INFO | exeerrorcode: 0
[2025-12-02 03:52:07] 2025-12-02 08:51:16,337 | INFO | exeerrordiag:
[2025-12-02 03:52:07] 2025-12-02 08:51:16,337 | INFO | exitcode: 65
[2025-12-02 03:52:07] 2025-12-02 08:51:16,337 | INFO | exitmsg: EVNTtoHITS got a SIGSEGV signal (exit code 139)
[2025-12-02 03:52:07] 2025-12-02 08:51:16,338 | INFO | cpuconsumptiontime: 58 s
[2025-12-02 03:52:07] 2025-12-02 08:51:16,338 | INFO | nevents: 0
[2025-12-02 03:52:07] 2025-12-02 08:51:16,338 | INFO | neventsw: 0
[2025-12-02 03:52:07] 2025-12-02 08:51:16,338 | INFO | pid: 327958
[2025-12-02 03:52:07] 2025-12-02 08:51:16,338 | INFO | pgrp: 327958
[2025-12-02 03:52:07] 2025-12-02 08:51:16,338 | INFO | corecount: 12
[2025-12-02 03:52:07] 2025-12-02 08:51:16,338 | INFO | event service: False
[2025-12-02 03:52:07] 2025-12-02 08:51:16,338 | INFO | sizes: {0: 2284406, 4: 2284668, 11: 2284696, 115: 2304482, 116: 2308782, 118: 2308838, 240: 2309160}
[2025-12-02 03:52:07] 2025-12-02 08:51:16,339 | INFO | --------------------------------------------------
[2025-12-02 03:52:07] 2025-12-02 08:51:16,339 | INFO |
[2025-12-02 03:52:07] 2025-12-02 08:51:16,339 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/4
[2025-12-02 03:52:07] 2025-12-02 08:51:16,357 | INFO | queue jobs had 0 job(s) [purged]
[2025-12-02 03:52:07] 2025-12-02 08:51:16,357 | INFO | queue payloads had 0 job(s) [purged]
[2025-12-02 03:52:07] 2025-12-02 08:51:16,357 | INFO | queue data_in had 0 job(s) [purged]
[2025-12-02 03:52:07] 2025-12-02 08:51:16,357 | INFO | queue data_out had 0 job(s) [purged]
[2025-12-02 03:52:07] 2025-12-02 08:51:16,357 | INFO | queue current_data_in had 0 job(s) [purged]
[2025-12-02 03:52:07] 2025-12-02 08:51:16,357 | INFO | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 03:52:07] 2025-12-02 08:51:16,358 | INFO | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 03:52:07] 2025-12-02 08:51:16,358 | INFO | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 03:52:07] 2025-12-02 08:51:16,358 | INFO | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 03:52:07] 2025-12-02 08:51:16,358 | INFO | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 03:52:07] 2025-12-02 08:51:16,358 | INFO | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 03:52:07] 2025-12-02 08:51:16,358 | INFO | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 03:52:07] 2025-12-02 08:51:16,358 | INFO | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 03:52:07] 2025-12-02 08:51:16,358 | INFO | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 03:52:07] 2025-12-02 08:51:16,358 | INFO | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 03:52:07] 2025-12-02 08:51:16,358 | INFO | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 03:52:07] 2025-12-02 08:51:16,359 | INFO | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 03:52:07] 2025-12-02 08:51:16,359 | INFO | queue completed_jobids has 1 job(s)
[2025-12-02 03:52:07] 2025-12-02 08:51:16,359 | INFO | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 03:52:07] 2025-12-02 08:51:16,359 | INFO | queue messages had 0 job(s) [purged]
[2025-12-02 03:52:07] 2025-12-02 08:51:16,359 | INFO | job 6905333404 has completed (purged errors)
[2025-12-02 03:52:07] 2025-12-02 08:51:16,359 | INFO | overall cleanup function is called
[2025-12-02 03:52:07] 2025-12-02 08:51:17,367 | INFO | --- collectZombieJob: --- 10, [327958]
[2025-12-02 03:52:07] 2025-12-02 08:51:17,368 | INFO | zombie collector waiting for pid 327958
[2025-12-02 03:52:07] 2025-12-02 08:51:17,368 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 03:52:07] 2025-12-02 08:51:17,368 | INFO | collected zombie processes
[2025-12-02 03:52:07] 2025-12-02 08:51:17,368 | INFO | will attempt to kill all subprocesses of pid=327958
[2025-12-02 03:52:07] 2025-12-02 08:51:17,521 | INFO | process IDs to be killed: [327958] (in reverse order)
[2025-12-02 03:52:07] 2025-12-02 08:51:17,572 | WARNING | found no corresponding commands to process id(s)
[2025-12-02 03:52:07] 2025-12-02 08:51:17,573 | INFO | Do not look for orphan processes in BOINC jobs
[2025-12-02 03:52:07] 2025-12-02 08:51:17,577 | INFO | did not find any defunct processes belonging to 327958
[2025-12-02 03:52:07] 2025-12-02 08:51:17,581 | INFO | did not find any defunct processes belonging to 327958
[2025-12-02 03:52:07] 2025-12-02 08:51:17,583 | WARNING | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 03:52:07] 2025-12-02 08:51:17,583 | INFO | ready for new job
[2025-12-02 03:52:07] 2025-12-02 08:51:17,583 | INFO | pilot has finished with previous job - re-establishing logging
[2025-12-02 03:52:07] 2025-12-02 08:51:17,585 | INFO | ***************************************
[2025-12-02 03:52:07] 2025-12-02 08:51:17,585 | INFO | *** PanDA Pilot version 3.11.1.15 ***
[2025-12-02 03:52:07] 2025-12-02 08:51:17,585 | INFO | ***************************************
[2025-12-02 03:52:07] 2025-12-02 08:51:17,585 | INFO |
[2025-12-02 03:52:07] 2025-12-02 08:51:17,606 | INFO | architecture information:
[2025-12-02 03:52:07] 2025-12-02 08:51:17,607 | INFO | executing command: cat /etc/os-release
[2025-12-02 03:52:07] 2025-12-02 08:51:17,618 | INFO | cat /etc/os-release:
[2025-12-02 03:52:07] NAME="CentOS Linux"
[2025-12-02 03:52:07] VERSION="7 (Core)"
[2025-12-02 03:52:07] ID="centos"
[2025-12-02 03:52:07] ID_LIKE="rhel fedora"
[2025-12-02 03:52:07] VERSION_ID="7"
[2025-12-02 03:52:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 03:52:07] ANSI_COLOR="0;31"
[2025-12-02 03:52:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 03:52:07] HOME_URL="https://www.centos.org/"
[2025-12-02 03:52:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 03:52:07]
[2025-12-02 03:52:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 03:52:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 03:52:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 03:52:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 03:52:07]
[2025-12-02 03:52:07] 2025-12-02 08:51:17,618 | INFO | ***************************************
[2025-12-02 03:52:07] 2025-12-02 08:51:18,121 | INFO | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-12-02 03:52:07] 2025-12-02 08:51:18,138 | INFO | sufficient remaining disk space (380116140032 B)
[2025-12-02 03:52:07] 2025-12-02 08:51:18,138 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 03:52:07] 2025-12-02 08:51:18,138 | INFO | current server update state: UPDATING_FINAL
[2025-12-02 03:52:07] 2025-12-02 08:51:18,138 | INFO | update_server=False
[2025-12-02 03:52:07] 2025-12-02 08:51:18,138 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 03:52:07] 2025-12-02 08:51:18,139 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 03:52:07] 2025-12-02 08:51:18,139 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 03:52:07] 2025-12-02 08:51:18,378 | INFO | all data control threads have been joined
[2025-12-02 03:52:07] 2025-12-02 08:51:18,426 | WARNING | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 03:52:07] 2025-12-02 08:51:18,427 | INFO | aborting loop
[2025-12-02 03:52:07] 2025-12-02 08:51:18,547 | INFO | all payload control threads have been joined
[2025-12-02 03:52:07] 2025-12-02 08:51:18,580 | WARNING | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 03:52:07] 2025-12-02 08:51:18,817 | INFO | all job control threads have been joined
[2025-12-02 03:52:07] 2025-12-02 08:51:19,144 | INFO | [job] retrieve thread has finished
[2025-12-02 03:52:07] 2025-12-02 08:51:19,145 | INFO | [job] queue monitor thread has finished
[2025-12-02 03:52:07] 2025-12-02 08:51:19,384 | INFO | [data] control thread has finished
[2025-12-02 03:52:07] 2025-12-02 08:51:19,426 | INFO | [payload] failed_post thread has finished
[2025-12-02 03:52:07] 2025-12-02 08:51:19,430 | INFO | [job] job monitor thread has finished
[2025-12-02 03:52:07] 2025-12-02 08:51:19,454 | INFO | [data] copytool_in thread has finished
[2025-12-02 03:52:07] 2025-12-02 08:51:19,552 | INFO | [payload] control thread has finished
[2025-12-02 03:52:07] 2025-12-02 08:51:19,679 | INFO | [job] validate thread has finished
[2025-12-02 03:52:07] 2025-12-02 08:51:19,822 | INFO | [job] control thread has finished
[2025-12-02 03:52:07] 2025-12-02 08:51:19,837 | INFO | [job] create_data_payload thread has finished
[2025-12-02 03:52:07] 2025-12-02 08:51:19,908 | INFO | [payload] validate_pre thread has finished
[2025-12-02 03:52:07] 2025-12-02 08:51:20,127 | INFO | [payload] validate_post thread has finished
[2025-12-02 03:52:07] 2025-12-02 08:51:20,460 | INFO | [payload] execute_payloads thread has finished
[2025-12-02 03:52:07] 2025-12-02 08:51:20,586 | INFO | [data] copytool_out thread has finished
[2025-12-02 03:52:07] 2025-12-02 08:51:20,642 | INFO | [payload] run_realtimelog thread has finished
[2025-12-02 03:52:07] 2025-12-02 08:51:22,142 | INFO | [data] queue_monitor thread has finished
[2025-12-02 03:52:07] 2025-12-02 08:51:48,230 | INFO | PID=312095 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-02 03:52:07] 2025-12-02 08:51:48,230 | INFO | .. there are 2 such processes running
[2025-12-02 03:52:07] 2025-12-02 08:51:48,231 | INFO | found 0 job(s) in 20 queues
[2025-12-02 03:52:07] 2025-12-02 08:51:48,231 | WARNING | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 03:52:07] 2025-12-02 08:51:48,231 | WARNING | will wait for a maximum of 300 s for threads to finish
[2025-12-02 03:52:07] 2025-12-02 08:52:01,454 | INFO | [monitor] cgroup control has ended
[2025-12-02 03:52:07] 2025-12-02 08:52:02,723 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140003345299264)>', '<ExcThread(monitor, started 140002889549568)>']
[2025-12-02 03:52:07] 2025-12-02 08:52:03,299 | WARNING | job_aborted has been set - aborting pilot monitoring
[2025-12-02 03:52:07] 2025-12-02 08:52:03,300 | INFO | [monitor] control thread has ended
[2025-12-02 03:52:07] 2025-12-02 08:52:07,735 | INFO | all workflow threads have been joined
[2025-12-02 03:52:07] 2025-12-02 08:52:07,735 | INFO | end of generic workflow (traces error code: 0)
[2025-12-02 03:52:07] 2025-12-02 08:52:07,736 | INFO | traces error code: 0
[2025-12-02 03:52:07] 2025-12-02 08:52:07,737 | INFO | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 03:52:07] 2025-12-02 08:52:07,834 [wrapper] ==== pilot stdout END ====
[2025-12-02 03:52:07] 2025-12-02 08:52:07,838 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 03:52:07] 2025-12-02 08:52:07,840 [wrapper] pilotpid: 312095
[2025-12-02 03:52:07] 2025-12-02 08:52:07,843 [wrapper] Pilot exit status: 0
[2025-12-02 03:52:07] 2025-12-02 08:52:07,853 [wrapper] pandaids: 6905333404
[2025-12-02 03:52:07] 2025-12-02 08:52:07,892 [wrapper] cleanup supervisor_pilot 312101 312096
[2025-12-02 03:52:07] 2025-12-02 08:52:07,895 [wrapper] Test setup, not cleaning
[2025-12-02 03:52:07] 2025-12-02 08:52:07,897 [wrapper] apfmon messages muted
[2025-12-02 03:52:07] 2025-12-02 08:52:07,901 [wrapper] ==== wrapper stdout END ====
[2025-12-02 03:52:07] 2025-12-02 08:52:07,904 [wrapper] ==== wrapper stderr END ====
[2025-12-02 03:52:07] *** Error codes and diagnostics ***
[2025-12-02 03:52:07] "exeErrorCode": 0,
[2025-12-02 03:52:07] "exeErrorDiag": "",
[2025-12-02 03:52:07] "pilotErrorCode": 1305,
[2025-12-02 03:52:07] "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGSEGV signal (exit code 139)",
[2025-12-02 03:52:07] *** Listing of results directory ***
[2025-12-02 03:52:07] total 371988
[2025-12-02 03:52:07] -rwx------ 1 boinc boinc 36292 Nov 29 19:21 runpilot2-wrapper.sh
[2025-12-02 03:52:07] -rw-r--r-- 1 boinc boinc 576529 Nov 29 19:24 pilot3.tar.gz
[2025-12-02 03:52:07] -rw-r--r-- 1 boinc boinc 5112 Nov 29 19:24 queuedata.json
[2025-12-02 03:52:07] -rw-r--r-- 1 boinc boinc 100 Dec 2 03:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 03:52:07] -rwxr-xr-x 1 boinc boinc 7986 Dec 2 03:45 run_atlas
[2025-12-02 03:52:07] -rw-r--r-- 1 boinc boinc 105 Dec 2 03:45 job.xml
[2025-12-02 03:52:07] -rw-r--r-- 2 boinc boinc 15847 Dec 2 03:45 start_atlas.sh
[2025-12-02 03:52:07] drwxrwx--x 2 boinc boinc 4096 Dec 2 03:45 shared
[2025-12-02 03:52:07] -rw-r--r-- 2 boinc boinc 590138 Dec 2 03:45 input.tar.gz
[2025-12-02 03:52:07] -rw-r--r-- 1 boinc boinc 7559 Dec 2 03:45 init_data.xml
[2025-12-02 03:52:07] -rw-r--r-- 2 boinc boinc 376967574 Dec 2 03:45 EVNT.47530720._000082.pool.root.1
[2025-12-02 03:52:07] -rw-r--r-- 1 boinc boinc 0 Dec 2 03:45 boinc_lockfile
[2025-12-02 03:52:07] -rw-r--r-- 1 boinc boinc 2878 Dec 2 03:45 pandaJob.out
[2025-12-02 03:52:07] -rw------- 1 boinc boinc 50 Dec 2 03:45 setup.sh.local
[2025-12-02 03:52:07] -rw------- 1 boinc boinc 0 Dec 2 03:47 agis_ddmendpoints.agis.ALL.json
[2025-12-02 03:52:07] -rw------- 1 boinc boinc 1263233 Dec 2 03:47 cric_ddmendpoints.json
[2025-12-02 03:52:07] -rw------- 1 boinc boinc 990249 Dec 2 03:47 agis_schedconf.cvmfs.json
[2025-12-02 03:52:07] drwx------ 5 boinc boinc 4096 Dec 2 03:47 pilot3
[2025-12-02 03:52:07] -rw-r--r-- 1 boinc boinc 524 Dec 2 03:48 boinc_task_state.xml
[2025-12-02 03:52:07] -rw------- 1 boinc boinc 997 Dec 2 03:49 memory_monitor_summary.json
[2025-12-02 03:52:07] -rw------- 1 boinc boinc 48353 Dec 2 03:49 log.47530725._002199.job.log.tgz.1
[2025-12-02 03:52:07] -rw------- 1 boinc boinc 95 Dec 2 03:51 pilot_heartbeat.json
[2025-12-02 03:52:07] -rw------- 1 boinc boinc 7561 Dec 2 03:51 heartbeat.json
[2025-12-02 03:52:07] -rw-r--r-- 1 boinc boinc 8192 Dec 2 03:52 boinc_mmap_file
[2025-12-02 03:52:07] -rw-r--r-- 1 boinc boinc 23 Dec 2 03:52 wrapper_checkpoint.txt
[2025-12-02 03:52:07] -rw------- 1 boinc boinc 4830 Dec 2 03:52 pilotlog.txt
[2025-12-02 03:52:07] -rw------- 1 boinc boinc 101495 Dec 2 03:52 log.47530725._002199.job.log.1
[2025-12-02 03:52:07] -rw------- 1 boinc boinc 186 Dec 2 03:52 output.list
[2025-12-02 03:52:07] -rw-r--r-- 1 boinc boinc 620 Dec 2 03:52 runtime_log
[2025-12-02 03:52:07] -rw------- 1 boinc boinc 163840 Dec 2 03:52 result.tar.gz
[2025-12-02 03:52:07] -rw-r--r-- 1 boinc boinc 9251 Dec 2 03:52 runtime_log.err
[2025-12-02 03:52:07] -rw------- 1 boinc boinc 635 Dec 2 03:52 d6ENDmtMkj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2XPKDmSqf9Sm.diag
[2025-12-02 03:52:07] -rw-r--r-- 1 boinc boinc 21762 Dec 2 03:52 stderr.txt
[2025-12-02 03:52:07] No HITS result produced
[2025-12-02 03:52:07] *** Contents of shared directory: ***
[2025-12-02 03:52:07] total 368896
[2025-12-02 03:52:07] -rw-r--r-- 2 boinc boinc 15847 Dec 2 03:45 start_atlas.sh
[2025-12-02 03:52:07] -rw-r--r-- 2 boinc boinc 590138 Dec 2 03:45 input.tar.gz
[2025-12-02 03:52:07] -rw-r--r-- 2 boinc boinc 376967574 Dec 2 03:45 ATLAS.root_0
[2025-12-02 03:52:07] -rw------- 1 boinc boinc 163840 Dec 2 03:52 result.tar.gz
03:52:09 (304586): run_atlas exited; CPU time 62.454476
03:52:09 (304586): called boinc_finish(0)
</stderr_txt>
]]>
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