Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:11:53 (25000): wrapper (7.7.26015): starting
20:11:53 (25000): wrapper: running run_atlas (--nthreads 12)
[2025-12-01 20:11:53] Arguments: --nthreads 12
[2025-12-01 20:11:53] Threads: 12
[2025-12-01 20:11:53] Checking for CVMFS
[2025-12-01 20:11:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 20:11:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 20:11:53] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 20:11:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 20:11:53] 2.11.2.0 2913 295645 96700 153538 2 81 14052855 20275201 1 130560 1 133573444 99.963 17785185 14012 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-01 20:11:53] CVMFS is ok
[2025-12-01 20:11:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 20:11:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 20:11:53] Further information can be found at the LHC@home message board.
[2025-12-01 20:11:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 20:11:53] Checking for apptainer binary...
[2025-12-01 20:11:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 20:11:53] Running /usr/bin/apptainer --version
[2025-12-01 20:11:53] apptainer version 1.3.2-1.el7
[2025-12-01 20:11:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 20:11:55] c-205-6.aglt2.org
[2025-12-01 20:11:55] apptainer works
[2025-12-01 20:11:55] Set ATHENA_PROC_NUMBER=12
[2025-12-01 20:11:55] Set ATHENA_CORE_NUMBER=12
[2025-12-01 20:11:55] Starting ATLAS job with PandaID=6905330631
[2025-12-01 20:11:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 02:33:04]  *** The last 200 lines of the pilot log: ***
[2025-12-02 02:33:04] 2025-12-02 07:32:32,206 | INFO     | monitor loop #1719: job 0:6905330631 is in state 'finished'
[2025-12-02 02:33:04] 2025-12-02 07:32:32,206 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 02:33:04] 2025-12-02 07:32:32,373 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-02 02:33:04] 2025-12-02 07:32:32,377 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-12-02 02:33:04] 2025-12-02 07:32:32,379 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6905330631/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 02:33:04] 2025-12-02 07:32:32,380 | INFO     | extracted standard info from prmon json
[2025-12-02 02:33:04] 2025-12-02 07:32:32,380 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 02:33:04] 2025-12-02 07:32:32,380 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 02:33:04] 2025-12-02 07:32:32,388 | INFO     | fitting pss+swap vs Time
[2025-12-02 02:33:04] 2025-12-02 07:32:32,389 | INFO     | sum of square deviations: 16221615683.093643
[2025-12-02 02:33:04] 2025-12-02 07:32:32,392 | INFO     | sum of deviations: 291695762446.8586
[2025-12-02 02:33:04] 2025-12-02 07:32:32,392 | INFO     | mean x: 1764649341.5802138
[2025-12-02 02:33:04] 2025-12-02 07:32:32,392 | INFO     | mean y: 3981217.5213903743
[2025-12-02 02:33:04] 2025-12-02 07:32:32,392 | INFO     | intersect: -31727798476.905487
[2025-12-02 02:33:04] 2025-12-02 07:32:32,392 | INFO     | chi2: 7.03061797911628
[2025-12-02 02:33:04] 2025-12-02 07:32:32,393 | INFO     | sum of square deviations: 15579687215.56092
[2025-12-02 02:33:04] 2025-12-02 07:32:32,396 | INFO     | sum of deviations: 479893580861.14624
[2025-12-02 02:33:04] 2025-12-02 07:32:32,396 | INFO     | mean x: 1764649189.0813007
[2025-12-02 02:33:04] 2025-12-02 07:32:32,396 | INFO     | mean y: 4025882.861788618
[2025-12-02 02:33:04] 2025-12-02 07:32:32,396 | INFO     | intersect: -54351610825.05104
[2025-12-02 02:33:04] 2025-12-02 07:32:32,397 | INFO     | chi2: 3.2061639284187144
[2025-12-02 02:33:04] 2025-12-02 07:32:32,397 | INFO     | current chi2=3.2061639284187144 (change=54.397125004625615 %)
[2025-12-02 02:33:04] 2025-12-02 07:32:32,397 | INFO     | sum of square deviations: 14954921860.52759
[2025-12-02 02:33:04] 2025-12-02 07:32:32,400 | INFO     | sum of deviations: 541193618935.10986
[2025-12-02 02:33:04] 2025-12-02 07:32:32,400 | INFO     | mean x: 1764649036.5824175
[2025-12-02 02:33:04] 2025-12-02 07:32:32,400 | INFO     | mean y: 4040819.8296703296
[2025-12-02 02:33:04] 2025-12-02 07:32:32,401 | INFO     | intersect: -63855657489.867935
[2025-12-02 02:33:04] 2025-12-02 07:32:32,401 | INFO     | chi2: 2.6531429556502357
[2025-12-02 02:33:04] 2025-12-02 07:32:32,401 | INFO     | current chi2=2.6531429556502357 (change=17.24868051401319 %)
[2025-12-02 02:33:04] 2025-12-02 07:32:32,401 | INFO     | right removable region: 363
[2025-12-02 02:33:04] 2025-12-02 07:32:32,402 | INFO     | sum of square deviations: 15579668915.56092
[2025-12-02 02:33:04] 2025-12-02 07:32:32,405 | INFO     | sum of deviations: 141275495256.30093
[2025-12-02 02:33:04] 2025-12-02 07:32:32,405 | INFO     | mean x: 1764649494.0813007
[2025-12-02 02:33:04] 2025-12-02 07:32:32,405 | INFO     | mean y: 4016845.623306233
[2025-12-02 02:33:04] 2025-12-02 07:32:32,405 | INFO     | intersect: -15997718016.734064
[2025-12-02 02:33:04] 2025-12-02 07:32:32,405 | INFO     | chi2: 4.583814121548909
[2025-12-02 02:33:04] 2025-12-02 07:32:32,406 | INFO     | current chi2=4.583814121548909 (change=34.80211646878479 %)
[2025-12-02 02:33:04] 2025-12-02 07:32:32,406 | INFO     | sum of square deviations: 14954885260.52759
[2025-12-02 02:33:04] 2025-12-02 07:32:32,409 | INFO     | sum of deviations: 104338405384.25272
[2025-12-02 02:33:04] 2025-12-02 07:32:32,409 | INFO     | mean x: 1764649646.5824175
[2025-12-02 02:33:04] 2025-12-02 07:32:32,409 | INFO     | mean y: 4025854.258241758
[2025-12-02 02:33:04] 2025-12-02 07:32:32,409 | INFO     | intersect: -12307718901.96993
[2025-12-02 02:33:04] 2025-12-02 07:32:32,410 | INFO     | chi2: 4.506981257715346
[2025-12-02 02:33:04] 2025-12-02 07:32:32,410 | INFO     | current chi2=4.506981257715346 (change=1.6761775629680398 %)
[2025-12-02 02:33:04] 2025-12-02 07:32:32,410 | INFO     | left removable region: 20
[2025-12-02 02:33:04] 2025-12-02 07:32:32,410 | INFO     | sum of square deviations: 12513006887.376028
[2025-12-02 02:33:04] 2025-12-02 07:32:32,413 | INFO     | sum of deviations: 299794578899.83966
[2025-12-02 02:33:04] 2025-12-02 07:32:32,413 | INFO     | mean x: 1764649616.0874636
[2025-12-02 02:33:04] 2025-12-02 07:32:32,413 | INFO     | mean y: 4101407.172011662
[2025-12-02 02:33:04] 2025-12-02 07:32:32,413 | INFO     | intersect: -42274496640.62645
[2025-12-02 02:33:04] 2025-12-02 07:32:32,414 | INFO     | chi2: 0.033540296971463296
[2025-12-02 02:33:04] 2025-12-02 07:32:32,414 | INFO     | current memory leak: 23.96 B/s (using 343 data points, chi2=0.03)
[2025-12-02 02:33:04] 2025-12-02 07:32:32,414 | INFO     | could have reported an average CPU frequency of 2362 MHz (16 samples)
[2025-12-02 02:33:04] 2025-12-02 07:32:32,415 | INFO     | ..............................
[2025-12-02 02:33:04] 2025-12-02 07:32:32,415 | INFO     | . Timing measurements:
[2025-12-02 02:33:04] 2025-12-02 07:32:32,415 | INFO     | . get job = 0 s
[2025-12-02 02:33:04] 2025-12-02 07:32:32,415 | INFO     | . initial setup = 2 s
[2025-12-02 02:33:04] 2025-12-02 07:32:32,415 | INFO     | . payload setup = 13 s
[2025-12-02 02:33:04] 2025-12-02 07:32:32,415 | INFO     | . stage-in = 0 s
[2025-12-02 02:33:04] 2025-12-02 07:32:32,415 | INFO     | . payload execution = 22774 s
[2025-12-02 02:33:04] 2025-12-02 07:32:32,415 | INFO     | . stage-out = 4 s
[2025-12-02 02:33:04] 2025-12-02 07:32:32,415 | INFO     | . log creation = 0 s
[2025-12-02 02:33:04] 2025-12-02 07:32:32,416 | INFO     | ..............................
[2025-12-02 02:33:04] 2025-12-02 07:32:32,502 | INFO     | 
[2025-12-02 02:33:04] 2025-12-02 07:32:32,502 | INFO     | job summary report
[2025-12-02 02:33:04] 2025-12-02 07:32:32,502 | INFO     | --------------------------------------------------
[2025-12-02 02:33:04] 2025-12-02 07:32:32,503 | INFO     | PanDA job id: 6905330631
[2025-12-02 02:33:04] 2025-12-02 07:32:32,503 | INFO     | task id: 47530725
[2025-12-02 02:33:04] 2025-12-02 07:32:32,503 | INFO     | errors: (none)
[2025-12-02 02:33:04] 2025-12-02 07:32:32,503 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 02:33:04] 2025-12-02 07:32:32,503 | INFO     | pilot state: finished 
[2025-12-02 02:33:04] 2025-12-02 07:32:32,504 | INFO     | transexitcode: 0
[2025-12-02 02:33:04] 2025-12-02 07:32:32,504 | INFO     | exeerrorcode: 0
[2025-12-02 02:33:04] 2025-12-02 07:32:32,504 | INFO     | exeerrordiag: 
[2025-12-02 02:33:04] 2025-12-02 07:32:32,504 | INFO     | exitcode: 0
[2025-12-02 02:33:04] 2025-12-02 07:32:32,504 | INFO     | exitmsg: OK
[2025-12-02 02:33:04] 2025-12-02 07:32:32,504 | INFO     | cpuconsumptiontime: 258152 s
[2025-12-02 02:33:04] 2025-12-02 07:32:32,504 | INFO     | nevents: 1000
[2025-12-02 02:33:04] 2025-12-02 07:32:32,505 | INFO     | neventsw: 0
[2025-12-02 02:33:04] 2025-12-02 07:32:32,505 | INFO     | pid: 3581
[2025-12-02 02:33:04] 2025-12-02 07:32:32,505 | INFO     | pgrp: 3581
[2025-12-02 02:33:04] 2025-12-02 07:32:32,505 | INFO     | corecount: 12
[2025-12-02 02:33:04] 2025-12-02 07:32:32,505 | INFO     | event service: False
[2025-12-02 02:33:04] 2025-12-02 07:32:32,505 | INFO     | sizes: {0: 2284399, 5: 2284661, 11: 2284717, 22790: 2338666, 22791: 2338665, 22795: 2347715, 22798: 2347899, 22806: 2348145}
[2025-12-02 02:33:04] 2025-12-02 07:32:32,506 | INFO     | --------------------------------------------------
[2025-12-02 02:33:04] 2025-12-02 07:32:32,506 | INFO     | 
[2025-12-02 02:33:04] 2025-12-02 07:32:32,506 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-02 02:33:04] 2025-12-02 07:32:32,530 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 02:33:04] 2025-12-02 07:32:32,531 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 02:33:04] 2025-12-02 07:32:32,531 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 02:33:04] 2025-12-02 07:32:32,531 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 02:33:04] 2025-12-02 07:32:32,531 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 02:33:04] 2025-12-02 07:32:32,531 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 02:33:04] 2025-12-02 07:32:32,532 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 02:33:04] 2025-12-02 07:32:32,532 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 02:33:04] 2025-12-02 07:32:32,532 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 02:33:04] 2025-12-02 07:32:32,532 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 02:33:04] 2025-12-02 07:32:32,532 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 02:33:04] 2025-12-02 07:32:32,532 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 02:33:04] 2025-12-02 07:32:32,533 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 02:33:04] 2025-12-02 07:32:32,533 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 02:33:04] 2025-12-02 07:32:32,533 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 02:33:04] 2025-12-02 07:32:32,533 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 02:33:04] 2025-12-02 07:32:32,533 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 02:33:04] 2025-12-02 07:32:32,533 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 02:33:04] 2025-12-02 07:32:32,534 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 02:33:04] 2025-12-02 07:32:32,534 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 02:33:04] 2025-12-02 07:32:32,534 | INFO     | job 6905330631 has completed (purged errors)
[2025-12-02 02:33:04] 2025-12-02 07:32:32,534 | INFO     | overall cleanup function is called
[2025-12-02 02:33:04] 2025-12-02 07:32:33,547 | INFO     | --- collectZombieJob: --- 10, [3581]
[2025-12-02 02:33:04] 2025-12-02 07:32:33,547 | INFO     | zombie collector waiting for pid 3581
[2025-12-02 02:33:04] 2025-12-02 07:32:33,547 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 02:33:04] 2025-12-02 07:32:33,547 | INFO     | collected zombie processes
[2025-12-02 02:33:04] 2025-12-02 07:32:33,547 | INFO     | will attempt to kill all subprocesses of pid=3581
[2025-12-02 02:33:04] 2025-12-02 07:32:33,639 | INFO     | process IDs to be killed: [3581] (in reverse order)
[2025-12-02 02:33:04] 2025-12-02 07:32:33,694 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 02:33:04] 2025-12-02 07:32:33,695 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 02:33:04] 2025-12-02 07:32:33,698 | INFO     | did not find any defunct processes belonging to 3581
[2025-12-02 02:33:04] 2025-12-02 07:32:33,701 | INFO     | did not find any defunct processes belonging to 3581
[2025-12-02 02:33:04] 2025-12-02 07:32:33,703 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 02:33:04] 2025-12-02 07:32:33,703 | INFO     | ready for new job
[2025-12-02 02:33:04] 2025-12-02 07:32:33,704 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 02:33:04] 2025-12-02 07:32:33,706 | INFO     | ***************************************
[2025-12-02 02:33:04] 2025-12-02 07:32:33,706 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 02:33:04] 2025-12-02 07:32:33,706 | INFO     | ***************************************
[2025-12-02 02:33:04] 2025-12-02 07:32:33,706 | INFO     | 
[2025-12-02 02:33:04] 2025-12-02 07:32:33,707 | INFO     | architecture information:
[2025-12-02 02:33:04] 2025-12-02 07:32:33,708 | INFO     | executing command: cat /etc/os-release
[2025-12-02 02:33:04] 2025-12-02 07:32:33,724 | INFO     | cat /etc/os-release:
[2025-12-02 02:33:04] NAME="CentOS Linux"
[2025-12-02 02:33:04] VERSION="7 (Core)"
[2025-12-02 02:33:04] ID="centos"
[2025-12-02 02:33:04] ID_LIKE="rhel fedora"
[2025-12-02 02:33:04] VERSION_ID="7"
[2025-12-02 02:33:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 02:33:04] ANSI_COLOR="0;31"
[2025-12-02 02:33:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 02:33:04] HOME_URL="https://www.centos.org/"
[2025-12-02 02:33:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 02:33:04] 
[2025-12-02 02:33:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 02:33:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 02:33:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 02:33:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 02:33:04] 
[2025-12-02 02:33:04] 2025-12-02 07:32:33,725 | INFO     | ***************************************
[2025-12-02 02:33:04] 2025-12-02 07:32:34,227 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-02 02:33:04] 2025-12-02 07:32:34,245 | INFO     | sufficient remaining disk space (28529655808 B)
[2025-12-02 02:33:04] 2025-12-02 07:32:34,245 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 02:33:04] 2025-12-02 07:32:34,245 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 02:33:04] 2025-12-02 07:32:34,245 | INFO     | update_server=False
[2025-12-02 02:33:04] 2025-12-02 07:32:34,246 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 02:33:04] 2025-12-02 07:32:34,246 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 02:33:04] 2025-12-02 07:32:34,521 | INFO     | all data control threads have been joined
[2025-12-02 02:33:04] 2025-12-02 07:32:34,602 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 02:33:04] 2025-12-02 07:32:34,710 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-02 02:33:04] 2025-12-02 07:32:34,710 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-02 02:33:04] 2025-12-02 07:32:34,710 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 02:33:04] 2025-12-02 07:32:34,710 | INFO     | will abort loop
[2025-12-02 02:33:04] 2025-12-02 07:32:35,250 | INFO     | [job] retrieve thread has finished
[2025-12-02 02:33:04] 2025-12-02 07:32:35,251 | INFO     | [job] queue monitor thread has finished
[2025-12-02 02:33:04] 2025-12-02 07:32:35,321 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 02:33:04] 2025-12-02 07:32:35,364 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 02:33:04] 2025-12-02 07:32:35,429 | INFO     | all payload control threads have been joined
[2025-12-02 02:33:04] 2025-12-02 07:32:35,483 | INFO     | [data] copytool_in thread has finished
[2025-12-02 02:33:04] 2025-12-02 07:32:35,527 | INFO     | [data] control thread has finished
[2025-12-02 02:33:04] 2025-12-02 07:32:35,716 | INFO     | [job] job monitor thread has finished
[2025-12-02 02:33:04] 2025-12-02 07:32:35,725 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 02:33:04] 2025-12-02 07:32:35,754 | INFO     | all job control threads have been joined
[2025-12-02 02:33:04] 2025-12-02 07:32:36,057 | INFO     | [payload] validate_post thread has finished
[2025-12-02 02:33:04] 2025-12-02 07:32:36,265 | INFO     | [job] validate thread has finished
[2025-12-02 02:33:04] 2025-12-02 07:32:36,337 | INFO     | [payload] failed_post thread has finished
[2025-12-02 02:33:04] 2025-12-02 07:32:36,371 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 02:33:04] 2025-12-02 07:32:36,434 | INFO     | [payload] control thread has finished
[2025-12-02 02:33:04] 2025-12-02 07:32:36,591 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 02:33:04] 2025-12-02 07:32:36,608 | INFO     | [data] copytool_out thread has finished
[2025-12-02 02:33:04] 2025-12-02 07:32:36,760 | INFO     | [job] control thread has finished
[2025-12-02 02:33:04] 2025-12-02 07:32:39,369 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 02:33:04] 2025-12-02 07:32:47,181 | INFO     | [monitor] cgroup control has ended
[2025-12-02 02:33:04] 2025-12-02 07:32:49,032 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140417647851328)>', '<ExcThread(monitor, started 140417345500928)>']
[2025-12-02 02:33:04] 2025-12-02 07:32:54,038 | INFO     | all workflow threads have been joined
[2025-12-02 02:33:04] 2025-12-02 07:32:54,038 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 02:33:04] 2025-12-02 07:32:54,038 | INFO     | traces error code: 0
[2025-12-02 02:33:04] 2025-12-02 07:32:54,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 02:33:04] 2025-12-02 07:33:03,910 | INFO     | PID=28744 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-02 02:33:04] 2025-12-02 07:33:03,911 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 02:33:04] 2025-12-02 07:33:03,911 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 02:33:04] 2025-12-02 07:33:03,911 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 02:33:04] 2025-12-02 07:33:03,911 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 02:33:04] 2025-12-02 07:33:03,911 | INFO     | [monitor] control thread has ended
[2025-12-02 02:33:04] 2025-12-02 07:33:04,008 [wrapper] ==== pilot stdout END ====
[2025-12-02 02:33:04] 2025-12-02 07:33:04,011 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 02:33:04] 2025-12-02 07:33:04,015 [wrapper] pilotpid: 28744
[2025-12-02 02:33:04] 2025-12-02 07:33:04,019 [wrapper] Pilot exit status: 0
[2025-12-02 02:33:04] 2025-12-02 07:33:04,032 [wrapper] pandaids: 6905330631
[2025-12-02 02:33:04] 2025-12-02 07:33:04,073 [wrapper] cleanup supervisor_pilot 12482 28745
[2025-12-02 02:33:04] 2025-12-02 07:33:04,077 [wrapper] Test setup, not cleaning
[2025-12-02 02:33:04] 2025-12-02 07:33:04,081 [wrapper] apfmon messages muted
[2025-12-02 02:33:04] 2025-12-02 07:33:04,085 [wrapper] ==== wrapper stdout END ====
[2025-12-02 02:33:04] 2025-12-02 07:33:04,089 [wrapper] ==== wrapper stderr END ====
[2025-12-02 02:33:04]  *** Error codes and diagnostics ***
[2025-12-02 02:33:04]     "exeErrorCode": 0,
[2025-12-02 02:33:04]     "exeErrorDiag": "",
[2025-12-02 02:33:04]     "pilotErrorCode": 0,
[2025-12-02 02:33:04]     "pilotErrorDiag": "",
[2025-12-02 02:33:04]  *** Listing of results directory ***
[2025-12-02 02:33:04] total 1066040
[2025-12-02 02:33:04] -rwx------ 1 boincer umatlas     36292 Nov 29 19:20 runpilot2-wrapper.sh
[2025-12-02 02:33:04] -rw-r--r-- 1 boincer umatlas    576529 Nov 29 19:24 pilot3.tar.gz
[2025-12-02 02:33:04] -rw-r--r-- 1 boincer umatlas      5112 Nov 29 19:24 queuedata.json
[2025-12-02 02:33:04] -rw-r--r-- 1 boincer umatlas       100 Dec  1 20:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 02:33:04] -rwxr-xr-x 1 boincer umatlas      7986 Dec  1 20:11 run_atlas
[2025-12-02 02:33:04] -rw-r--r-- 1 boincer umatlas       105 Dec  1 20:11 job.xml
[2025-12-02 02:33:04] -rw-r--r-- 2 boincer umatlas 377140653 Dec  1 20:11 EVNT.47530720._000051.pool.root.1
[2025-12-02 02:33:04] -rw-r--r-- 2 boincer umatlas     15847 Dec  1 20:11 start_atlas.sh
[2025-12-02 02:33:04] drwxrwx--x 2 boincer umatlas      4096 Dec  1 20:11 shared
[2025-12-02 02:33:04] -rw-r--r-- 2 boincer umatlas    590131 Dec  1 20:11 input.tar.gz
[2025-12-02 02:33:04] -rw-r--r-- 1 boincer umatlas         0 Dec  1 20:11 boinc_lockfile
[2025-12-02 02:33:04] -rw-r--r-- 1 boincer umatlas      2878 Dec  1 20:11 pandaJob.out
[2025-12-02 02:33:04] -rw------- 1 boincer umatlas        57 Dec  1 20:11 setup.sh.local
[2025-12-02 02:33:04] -rw------- 1 boincer umatlas    992024 Dec  1 20:12 agis_schedconf.cvmfs.json
[2025-12-02 02:33:04] drwx------ 5 boincer umatlas      4096 Dec  1 20:12 pilot3
[2025-12-02 02:33:04] -rw-r--r-- 1 boincer umatlas       532 Dec  2 02:21 boinc_task_state.xml
[2025-12-02 02:33:04] -rw-r--r-- 1 boincer umatlas      5955 Dec  2 02:30 init_data.xml
[2025-12-02 02:33:04] -rw------- 1 boincer umatlas 699588912 Dec  2 02:31 HITS.47530725._001770.pool.root.1
[2025-12-02 02:33:04] -rw------- 1 boincer umatlas      1061 Dec  2 02:32 memory_monitor_summary.json
[2025-12-02 02:33:04] -rw------- 1 boincer umatlas        95 Dec  2 02:32 pilot_heartbeat.json
[2025-12-02 02:33:04] -rw------- 1 boincer umatlas   1516240 Dec  2 02:32 agis_ddmendpoints.agis.ALL.json
[2025-12-02 02:33:04] -rw------- 1 boincer umatlas   2254964 Dec  2 02:32 log.47530725._001770.job.log.tgz.1
[2025-12-02 02:33:04] -rw------- 1 boincer umatlas     26995 Dec  2 02:32 heartbeat.json
[2025-12-02 02:33:04] -rw-r--r-- 1 boincer umatlas      8192 Dec  2 02:32 boinc_mmap_file
[2025-12-02 02:33:04] -rw-r--r-- 1 boincer umatlas        29 Dec  2 02:32 wrapper_checkpoint.txt
[2025-12-02 02:33:04] -rw------- 1 boincer umatlas       745 Dec  2 02:33 pilotlog.txt
[2025-12-02 02:33:04] -rw------- 1 boincer umatlas   3214435 Dec  2 02:33 log.47530725._001770.job.log.1
[2025-12-02 02:33:04] -rw------- 1 boincer umatlas       353 Dec  2 02:33 output.list
[2025-12-02 02:33:04] -rw-r--r-- 1 boincer umatlas       620 Dec  2 02:33 runtime_log
[2025-12-02 02:33:04] -rw------- 1 boincer umatlas   5509120 Dec  2 02:33 result.tar.gz
[2025-12-02 02:33:04] -rw-r--r-- 1 boincer umatlas      9340 Dec  2 02:33 runtime_log.err
[2025-12-02 02:33:04] -rw------- 1 boincer umatlas       670 Dec  2 02:33 OFZKDmaMkj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjWPKDmRia3Rm.diag
[2025-12-02 02:33:04] -rw-r--r-- 1 boincer umatlas     21323 Dec  2 02:33 stderr.txt
[2025-12-02 02:33:04] HITS file was successfully produced:
[2025-12-02 02:33:04] -rw------- 1 boincer umatlas 699588912 Dec  2 02:31 shared/HITS.pool.root.1
[2025-12-02 02:33:04]  *** Contents of shared directory: ***
[2025-12-02 02:33:04] total 1057484
[2025-12-02 02:33:04] -rw-r--r-- 2 boincer umatlas 377140653 Dec  1 20:11 ATLAS.root_0
[2025-12-02 02:33:04] -rw-r--r-- 2 boincer umatlas     15847 Dec  1 20:11 start_atlas.sh
[2025-12-02 02:33:04] -rw-r--r-- 2 boincer umatlas    590131 Dec  1 20:11 input.tar.gz
[2025-12-02 02:33:04] -rw------- 1 boincer umatlas 699588912 Dec  2 02:31 HITS.pool.root.1
[2025-12-02 02:33:04] -rw------- 1 boincer umatlas   5509120 Dec  2 02:33 result.tar.gz
02:33:05 (25000): run_atlas exited; CPU time 249913.126044
02:33:05 (25000): called boinc_finish(0)

</stderr_txt>
]]>

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