Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:09:08 (3546283): wrapper (7.7.26015): starting
17:09:08 (3546283): wrapper: running run_atlas (--nthreads 8)
[2025-12-01 17:09:08] Arguments: --nthreads 8
[2025-12-01 17:09:08] Threads: 8
[2025-12-01 17:09:08] Checking for CVMFS
[2025-12-01 17:09:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 17:09:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 17:09:08] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 17:09:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 17:09:09] 2.11.3.0 756893 36346 255876 153538 3 645 32325555 45568001 20001 130560 0 257568079 99.780 176373232 25501 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-01 17:09:09] CVMFS is ok
[2025-12-01 17:09:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 17:09:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 17:09:09] Further information can be found at the LHC@home message board.
[2025-12-01 17:09:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 17:09:09] Checking for apptainer binary...
[2025-12-01 17:09:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 17:09:09] Running /usr/bin/apptainer --version
[2025-12-01 17:09:09] apptainer version 1.4.1-1.el9
[2025-12-01 17:09:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 17:09:09] wns0012.triumf.lcg
[2025-12-01 17:09:09] apptainer works
[2025-12-01 17:09:09] Set ATHENA_PROC_NUMBER=8
[2025-12-01 17:09:09] Set ATHENA_CORE_NUMBER=8
[2025-12-01 17:09:09] Starting ATLAS job with PandaID=6905332288
[2025-12-01 17:09:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 17:15:42]  *** The last 200 lines of the pilot log: ***
[2025-12-01 17:15:42] 2025-12-02 01:15:06,127 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-01 17:15:42] 2025-12-02 01:15:06,127 | WARNING  | wrong length of table data, x=[1764637849.0, 1764637910.0, 1764637971.0], y=[1757.0, 560336.0, 746375.0] (must be same and length>=4)
[2025-12-01 17:15:42] 2025-12-02 01:15:06,128 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-01 17:15:42] 2025-12-02 01:15:06,128 | INFO     | ..............................
[2025-12-01 17:15:42] 2025-12-02 01:15:06,128 | INFO     | . Timing measurements:
[2025-12-01 17:15:42] 2025-12-02 01:15:06,128 | INFO     | . get job = 0 s
[2025-12-01 17:15:42] 2025-12-02 01:15:06,128 | INFO     | . initial setup = 4 s
[2025-12-01 17:15:42] 2025-12-02 01:15:06,128 | INFO     | . payload setup = 18 s
[2025-12-01 17:15:42] 2025-12-02 01:15:06,129 | INFO     | . stage-in = 0 s
[2025-12-01 17:15:42] 2025-12-02 01:15:06,129 | INFO     | . payload execution = 149 s
[2025-12-01 17:15:42] 2025-12-02 01:15:06,129 | INFO     | . stage-out = 0 s
[2025-12-01 17:15:42] 2025-12-02 01:15:06,155 | INFO     | . log creation = 0 s
[2025-12-01 17:15:42] 2025-12-02 01:15:06,155 | INFO     | ..............................
[2025-12-01 17:15:42] 2025-12-02 01:15:06,155 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-01 17:15:42] 2025-12-02 01:15:06,156 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905332288/pilotlog.txt
[2025-12-01 17:15:42] 2025-12-02 01:15:06,171 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-01 17:15:42] - Log from pilotlog.txt -
[2025-12-01 17:15:42] 2025-12-02 01:15:06,125 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6905332288/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 17:15:42] 2025-12-02 01:15:06,126 | INFO     | extracted standard info from prmon json
[2025-12-01 17:15:42] 2025-12-02 01:15:06,126 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 17:15:42] 2025-12-02 01:15:06,126 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 17:15:42] 2025-12-02 01:15:06,127 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-01 17:15:42] 2025-12-02 01:15:06,127 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-01 17:15:42] 2025-12-02 01:15:06,127 | WARNING  | wrong length of table data, x=[1764637849.0, 1764637910.0, 1764637971.0], y=[1757.0, 560336.0, 746375.0] (must be same and length>=4)
[2025-12-01 17:15:42] 2025-12-02 01:15:06,128 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-01 17:15:42] 2025-12-02 01:15:06,128 | INFO     | ..............................
[2025-12-01 17:15:42] 2025-12-02 01:15:06,128 | INFO     | . Timing measurements:
[2025-12-01 17:15:42] 2025-12-02 01:15:06,128 | INFO     | . get job = 0 s
[2025-12-01 17:15:42] 2025-12-02 01:15:06,128 | INFO     | . initial setup = 4 s
[2025-12-01 17:15:42] 2025-12-02 01:15:06,128 | INFO     | . payload setup = 18 s
[2025-12-01 17:15:42] 2025-12-02 01:15:06,129 | INFO     | . stage-in = 0 s
[2025-12-01 17:15:42] 2025-12-02 01:15:06,129 | INFO     | . payload execution = 149 s
[2025-12-01 17:15:42] 2025-12-02 01:15:06,129 | INFO     | . stage-out = 0 s
[2025-12-01 17:15:42] 2025-12-02 01:15:06,155 | INFO     | . log creation = 0 s
[2025-12-01 17:15:42] 2025-12-02 01:15:06,155 | INFO     | ..............................
[2025-12-01 17:15:42] 2025-12-02 01:15:06,155 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-01 17:15:42] 2025-12-02 01:15:06,156 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905332288/pilotlog.txt
[2025-12-01 17:15:42] 2025-12-02 01:15:06,172 | WARNING  | 
[2025-12-01 17:15:42] [begin log extracts]
[2025-12-01 17:15:42] - Log from pilotlog.txt -
[2025-12-01 17:15:42] 2025-12-02 01:15:06,125 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6905332288/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 17:15:42] 2025-12-02 01:15:06,126 | INFO     | extracted standard info from prmon json
[2025-12-01 17:15:42] 2025-12-02 01:15:06,126 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 17:15:42] 2025-12-02 01:15:06,126 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 17:15:42] 2025-12-02 01:15:06,127 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-01 17:15:42] 2025-12-02 01:15:06,127 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-01 17:15:42] 2025-12-02 01:15:06,127 | WARNING  | wrong length of table data, x=[1764637849.0, 1764637910.0, 1764637971.0], y=[1757.0, 560336.0, 746375.0] (must be same and length>=4)
[2025-12-01 17:15:42] 2025-12-02 01:15:06,128 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-01 17:15:42] 2025-12-02 01:15:06,128 | INFO     | ..............................
[2025-12-01 17:15:42] 2025-12-02 01:15:06,128 | INFO     | . Timing measurements:
[2025-12-01 17:15:42] 2025-12-02 01:15:06,128 | INFO     | . get job = 0 s
[2025-12-01 17:15:42] 2025-12-02 01:15:06,128 | INFO     | . initial setup = 4 s
[2025-12-01 17:15:42] 2025-12-02 01:15:06,128 | INFO     | . payload setup = 18 s
[2025-12-01 17:15:42] 2025-12-02 01:15:06,129 | INFO     | . stage-in = 0 s
[2025-12-01 17:15:42] 2025-12-02 01:15:06,129 | INFO     | . payload execution = 149 s
[2025-12-01 17:15:42] 2025-12-02 01:15:06,129 | INFO     | . stage-out = 0 s
[2025-12-01 17:15:42] 2025-12-02 01:15:06,155 | INFO     | . log creation = 0 s
[2025-12-01 17:15:42] 2025-12-02 01:15:06,155 | INFO     | ..............................
[2025-12-01 17:15:42] 2025-12-02 01:15:06,155 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-01 17:15:42] 2025-12-02 01:15:06,156 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905332288/pilotlog.txt
[2025-12-01 17:15:42] [end log extracts]
[2025-12-01 17:15:42] 2025-12-02 01:15:06,172 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-12-01 17:15:42] 2025-12-02 01:15:06,173 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-01 17:15:42] 2025-12-02 01:15:06,611 | INFO     | 
[2025-12-01 17:15:42] 2025-12-02 01:15:06,611 | INFO     | job summary report
[2025-12-01 17:15:42] 2025-12-02 01:15:06,611 | INFO     | --------------------------------------------------
[2025-12-01 17:15:42] 2025-12-02 01:15:06,612 | INFO     | PanDA job id: 6905332288
[2025-12-01 17:15:42] 2025-12-02 01:15:06,612 | INFO     | task id: 47530725
[2025-12-01 17:15:42] 2025-12-02 01:15:06,612 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-01 17:12:56,325 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-01 17:15:42] 2025-12-02 01:15:06,612 | INFO     | error 2/2: 1165: Local output file is missing
[2025-12-01 17:15:42] 2025-12-02 01:15:06,612 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 17:15:42] 2025-12-02 01:15:06,612 | INFO     | pilot state: failed 
[2025-12-01 17:15:42] 2025-12-02 01:15:06,612 | INFO     | transexitcode: 65
[2025-12-01 17:15:42] 2025-12-02 01:15:06,612 | INFO     | exeerrorcode: 65
[2025-12-01 17:15:42] 2025-12-02 01:15:06,612 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-12-01 17:15:42] 2025-12-02 01:15:06,612 | INFO     | exitcode: 65
[2025-12-01 17:15:42] 2025-12-02 01:15:06,612 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-12-01 17:15:42] 2025-12-02 01:15:06,612 | INFO     | cpuconsumptiontime: 74 s
[2025-12-01 17:15:42] 2025-12-02 01:15:06,612 | INFO     | nevents: 0
[2025-12-01 17:15:42] 2025-12-02 01:15:06,613 | INFO     | neventsw: 0
[2025-12-01 17:15:42] 2025-12-02 01:15:06,613 | INFO     | pid: 3557643
[2025-12-01 17:15:42] 2025-12-02 01:15:06,613 | INFO     | pgrp: 3557643
[2025-12-01 17:15:42] 2025-12-02 01:15:06,613 | INFO     | corecount: 8
[2025-12-01 17:15:42] 2025-12-02 01:15:06,613 | INFO     | event service: False
[2025-12-01 17:15:42] 2025-12-02 01:15:06,613 | INFO     | sizes: {0: 2284169, 1: 2284253, 2: 2284452, 3: 2284452, 13: 2284480, 17: 2284798, 24: 2284954, 171: 2308509, 172: 2312799, 174: 2312827, 294: 2312993}
[2025-12-01 17:15:42] 2025-12-02 01:15:06,613 | INFO     | --------------------------------------------------
[2025-12-01 17:15:42] 2025-12-02 01:15:06,613 | INFO     | 
[2025-12-01 17:15:42] 2025-12-02 01:15:06,613 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-01 17:15:42] 2025-12-02 01:15:06,630 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 17:15:42] 2025-12-02 01:15:06,631 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 17:15:42] 2025-12-02 01:15:06,631 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 17:15:42] 2025-12-02 01:15:06,631 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 17:15:42] 2025-12-02 01:15:06,631 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 17:15:42] 2025-12-02 01:15:06,631 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 17:15:42] 2025-12-02 01:15:06,631 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 17:15:42] 2025-12-02 01:15:06,631 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 17:15:42] 2025-12-02 01:15:06,631 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 17:15:42] 2025-12-02 01:15:06,631 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 17:15:42] 2025-12-02 01:15:06,631 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 17:15:42] 2025-12-02 01:15:06,631 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 17:15:42] 2025-12-02 01:15:06,632 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 17:15:42] 2025-12-02 01:15:06,632 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 17:15:42] 2025-12-02 01:15:06,632 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 17:15:42] 2025-12-02 01:15:06,632 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 17:15:42] 2025-12-02 01:15:06,632 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 17:15:42] 2025-12-02 01:15:06,632 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 17:15:42] 2025-12-02 01:15:06,632 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 17:15:42] 2025-12-02 01:15:06,632 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 17:15:42] 2025-12-02 01:15:06,632 | INFO     | job 6905332288 has completed (purged errors)
[2025-12-01 17:15:42] 2025-12-02 01:15:06,632 | INFO     | overall cleanup function is called
[2025-12-01 17:15:42] 2025-12-02 01:15:07,647 | INFO     | --- collectZombieJob: --- 10, [3557643]
[2025-12-01 17:15:42] 2025-12-02 01:15:07,648 | INFO     | zombie collector waiting for pid 3557643
[2025-12-01 17:15:42] 2025-12-02 01:15:07,648 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 17:15:42] 2025-12-02 01:15:07,648 | INFO     | collected zombie processes
[2025-12-01 17:15:42] 2025-12-02 01:15:07,648 | INFO     | will attempt to kill all subprocesses of pid=3557643
[2025-12-01 17:15:42] 2025-12-02 01:15:07,851 | INFO     | process IDs to be killed: [3557643] (in reverse order)
[2025-12-01 17:15:42] 2025-12-02 01:15:07,921 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 17:15:42] 2025-12-02 01:15:07,922 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 17:15:42] 2025-12-02 01:15:07,929 | INFO     | did not find any defunct processes belonging to 3557643
[2025-12-01 17:15:42] 2025-12-02 01:15:07,936 | INFO     | did not find any defunct processes belonging to 3557643
[2025-12-01 17:15:42] 2025-12-02 01:15:07,937 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 17:15:42] 2025-12-02 01:15:07,937 | INFO     | ready for new job
[2025-12-01 17:15:42] 2025-12-02 01:15:07,937 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 17:15:42] 2025-12-02 01:15:07,938 | INFO     | ***************************************
[2025-12-01 17:15:42] 2025-12-02 01:15:07,939 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 17:15:42] 2025-12-02 01:15:07,939 | INFO     | ***************************************
[2025-12-01 17:15:42] 2025-12-02 01:15:07,939 | INFO     | 
[2025-12-01 17:15:42] 2025-12-02 01:15:07,940 | INFO     | architecture information:
[2025-12-01 17:15:42] 2025-12-02 01:15:07,941 | INFO     | executing command: cat /etc/os-release
[2025-12-01 17:15:42] 2025-12-02 01:15:07,955 | INFO     | cat /etc/os-release:
[2025-12-01 17:15:42] NAME="CentOS Linux"
[2025-12-01 17:15:42] VERSION="7 (Core)"
[2025-12-01 17:15:42] ID="centos"
[2025-12-01 17:15:42] ID_LIKE="rhel fedora"
[2025-12-01 17:15:42] VERSION_ID="7"
[2025-12-01 17:15:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 17:15:42] ANSI_COLOR="0;31"
[2025-12-01 17:15:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 17:15:42] HOME_URL="https://www.centos.org/"
[2025-12-01 17:15:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 17:15:42] 
[2025-12-01 17:15:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 17:15:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 17:15:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 17:15:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 17:15:42] 
[2025-12-01 17:15:42] 2025-12-02 01:15:07,955 | INFO     | ***************************************
[2025-12-01 17:15:42] 2025-12-02 01:15:08,457 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-01 17:15:42] 2025-12-02 01:15:08,477 | INFO     | sufficient remaining disk space (1248914833408 B)
[2025-12-01 17:15:42] 2025-12-02 01:15:08,478 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 17:15:42] 2025-12-02 01:15:08,478 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 17:15:42] 2025-12-02 01:15:08,478 | INFO     | update_server=False
[2025-12-01 17:15:42] 2025-12-02 01:15:08,478 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 17:15:42] 2025-12-02 01:15:08,479 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 17:15:42] 2025-12-02 01:15:08,479 | INFO     | aborting loop
[2025-12-01 17:15:42] 2025-12-02 01:15:08,582 | INFO     | all payload control threads have been joined
[2025-12-01 17:15:42] 2025-12-02 01:15:09,080 | INFO     | all data control threads have been joined
[2025-12-01 17:15:42] 2025-12-02 01:15:09,209 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 17:15:42] 2025-12-02 01:15:09,447 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 17:15:42] 2025-12-02 01:15:09,457 | INFO     | all job control threads have been joined
[2025-12-01 17:15:42] 2025-12-02 01:15:09,483 | INFO     | [job] retrieve thread has finished
[2025-12-01 17:15:42] 2025-12-02 01:15:09,485 | INFO     | [job] job monitor thread has finished
[2025-12-01 17:15:42] 2025-12-02 01:15:09,587 | INFO     | [payload] control thread has finished
[2025-12-01 17:15:42] 2025-12-02 01:15:09,611 | INFO     | [payload] failed_post thread has finished
[2025-12-01 17:15:42] 2025-12-02 01:15:09,632 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 17:15:42] 2025-12-02 01:15:09,935 | INFO     | [data] copytool_in thread has finished
[2025-12-01 17:15:42] 2025-12-02 01:15:09,969 | INFO     | [payload] validate_post thread has finished
[2025-12-01 17:15:42] 2025-12-02 01:15:10,010 | INFO     | [job] validate thread has finished
[2025-12-01 17:15:42] 2025-12-02 01:15:10,086 | INFO     | [data] control thread has finished
[2025-12-01 17:15:42] 2025-12-02 01:15:10,126 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 17:15:42] 2025-12-02 01:15:10,462 | INFO     | [job] control thread has finished
[2025-12-01 17:15:42] 2025-12-02 01:15:10,638 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 17:15:42] 2025-12-02 01:15:10,735 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 17:15:42] 2025-12-02 01:15:11,281 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 17:15:42] 2025-12-02 01:15:11,454 | INFO     | [data] copytool_out thread has finished
[2025-12-01 17:15:42] 2025-12-02 01:15:12,288 | INFO     | [job] queue monitor thread has finished
[2025-12-01 17:15:42] 2025-12-02 01:15:13,217 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 17:15:42] 2025-12-02 01:15:36,239 | INFO     | [monitor] cgroup control has ended
[2025-12-01 17:15:42] 2025-12-02 01:15:37,072 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140270542079808)>', '<ExcThread(monitor, started 140269714392832)>']
[2025-12-01 17:15:42] 2025-12-02 01:15:38,957 | INFO     | PID=3550050 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-01 17:15:42] 2025-12-02 01:15:38,957 | INFO     | .. there are 26 such processes running
[2025-12-01 17:15:42] 2025-12-02 01:15:38,958 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 17:15:42] 2025-12-02 01:15:38,958 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 17:15:42] 2025-12-02 01:15:38,958 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 17:15:42] 2025-12-02 01:15:38,958 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 17:15:42] 2025-12-02 01:15:38,958 | INFO     | [monitor] control thread has ended
[2025-12-01 17:15:42] 2025-12-02 01:15:42,098 | INFO     | all workflow threads have been joined
[2025-12-01 17:15:42] 2025-12-02 01:15:42,098 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 17:15:42] 2025-12-02 01:15:42,098 | INFO     | traces error code: 0
[2025-12-01 17:15:42] 2025-12-02 01:15:42,099 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 17:15:42] 2025-12-02 01:15:42,254 [wrapper] ==== pilot stdout END ====
[2025-12-01 17:15:42] 2025-12-02 01:15:42,260 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 17:15:42] 2025-12-02 01:15:42,264 [wrapper] pilotpid: 3550050
[2025-12-01 17:15:42] 2025-12-02 01:15:42,267 [wrapper] Pilot exit status: 0
[2025-12-01 17:15:42] 2025-12-02 01:15:42,296 [wrapper] pandaids: 6905332288
[2025-12-01 17:15:42] 2025-12-02 01:15:42,340 [wrapper] cleanup supervisor_pilot 3550056 3550051
[2025-12-01 17:15:42] 2025-12-02 01:15:42,343 [wrapper] Test setup, not cleaning
[2025-12-01 17:15:42] 2025-12-02 01:15:42,346 [wrapper] apfmon messages muted
[2025-12-01 17:15:42] 2025-12-02 01:15:42,348 [wrapper] ==== wrapper stdout END ====
[2025-12-01 17:15:42] 2025-12-02 01:15:42,353 [wrapper] ==== wrapper stderr END ====
[2025-12-01 17:15:42]  *** Error codes and diagnostics ***
[2025-12-01 17:15:42]     "exeErrorCode": 65,
[2025-12-01 17:15:42]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-12-01 17:15:42]     "pilotErrorCode": 1305,
[2025-12-01 17:15:42]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-12-01 17:15:42]  *** Listing of results directory ***
[2025-12-01 17:15:42] total 370968
[2025-12-01 17:15:42] -rwx------. 1 boinc boinc     36292 Nov 29 16:21 runpilot2-wrapper.sh
[2025-12-01 17:15:42] -rw-r--r--. 1 boinc boinc    576529 Nov 29 16:24 pilot3.tar.gz
[2025-12-01 17:15:42] -rw-r--r--. 1 boinc boinc      5112 Nov 29 16:27 queuedata.json
[2025-12-01 17:15:42] -rw-r--r--. 1 boinc boinc       100 Dec  1 17:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 17:15:42] -rwxr-xr-x. 1 boinc boinc      7986 Dec  1 17:09 run_atlas
[2025-12-01 17:15:42] -rw-r--r--. 1 boinc boinc       105 Dec  1 17:09 job.xml
[2025-12-01 17:15:42] -rw-r--r--. 1 boinc boinc      6447 Dec  1 17:09 init_data.xml
[2025-12-01 17:15:42] -rw-r--r--. 2 boinc boinc 375633319 Dec  1 17:09 EVNT.47530720._000055.pool.root.1
[2025-12-01 17:15:42] -rw-r--r--. 2 boinc boinc     15847 Dec  1 17:09 start_atlas.sh
[2025-12-01 17:15:42] drwxrwx--x. 2 boinc boinc      4096 Dec  1 17:09 shared
[2025-12-01 17:15:42] -rw-r--r--. 2 boinc boinc    590137 Dec  1 17:09 input.tar.gz
[2025-12-01 17:15:42] -rw-r--r--. 1 boinc boinc         0 Dec  1 17:09 boinc_lockfile
[2025-12-01 17:15:42] -rw-r--r--. 1 boinc boinc      2878 Dec  1 17:09 pandaJob.out
[2025-12-01 17:15:42] -rw-------. 1 boinc boinc    992024 Dec  1 17:09 agis_schedconf.cvmfs.json
[2025-12-01 17:15:42] -rw-------. 1 boinc boinc   1516240 Dec  1 17:09 agis_ddmendpoints.agis.ALL.json
[2025-12-01 17:15:42] drwx------. 5 boinc boinc      4096 Dec  1 17:09 pilot3
[2025-12-01 17:15:42] -rw-r--r--. 1 boinc boinc       524 Dec  1 17:12 boinc_task_state.xml
[2025-12-01 17:15:42] -rw-------. 1 boinc boinc      1023 Dec  1 17:13 memory_monitor_summary.json
[2025-12-01 17:15:42] -rw-------. 1 boinc boinc     50238 Dec  1 17:13 log.47530725._001953.job.log.tgz.1
[2025-12-01 17:15:42] -rw-------. 1 boinc boinc      9875 Dec  1 17:15 heartbeat.json
[2025-12-01 17:15:42] -rw-------. 1 boinc boinc        95 Dec  1 17:15 pilot_heartbeat.json
[2025-12-01 17:15:42] -rw-r--r--. 1 boinc boinc      8192 Dec  1 17:15 boinc_mmap_file
[2025-12-01 17:15:42] -rw-r--r--. 1 boinc boinc        23 Dec  1 17:15 wrapper_checkpoint.txt
[2025-12-01 17:15:42] -rw-------. 1 boinc boinc      4823 Dec  1 17:15 pilotlog.txt
[2025-12-01 17:15:42] -rw-------. 1 boinc boinc    108203 Dec  1 17:15 log.47530725._001953.job.log.1
[2025-12-01 17:15:42] -rw-------. 1 boinc boinc       186 Dec  1 17:15 output.list
[2025-12-01 17:15:42] -rw-r--r--. 1 boinc boinc       620 Dec  1 17:15 runtime_log
[2025-12-01 17:15:42] -rw-------. 1 boinc boinc    184320 Dec  1 17:15 result.tar.gz
[2025-12-01 17:15:42] -rw-r--r--. 1 boinc boinc      8634 Dec  1 17:15 runtime_log.err
[2025-12-01 17:15:42] -rw-------. 1 boinc boinc       645 Dec  1 17:15 nMrNDmiMkj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZFMKDmyeYKRo.diag
[2025-12-01 17:15:42] -rw-r--r--. 1 boinc boinc     22590 Dec  1 17:15 stderr.txt
[2025-12-01 17:15:42] No HITS result produced
[2025-12-01 17:15:42]  *** Contents of shared directory: ***
[2025-12-01 17:15:42] total 367612
[2025-12-01 17:15:42] -rw-r--r--. 2 boinc boinc 375633319 Dec  1 17:09 ATLAS.root_0
[2025-12-01 17:15:42] -rw-r--r--. 2 boinc boinc     15847 Dec  1 17:09 start_atlas.sh
[2025-12-01 17:15:42] -rw-r--r--. 2 boinc boinc    590137 Dec  1 17:09 input.tar.gz
[2025-12-01 17:15:42] -rw-------. 1 boinc boinc    184320 Dec  1 17:15 result.tar.gz
17:15:44 (3546283): run_atlas exited; CPU time 75.852135
17:15:44 (3546283): called boinc_finish(0)

</stderr_txt>
]]>

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