Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:26:07 (2217284): wrapper (7.7.26015): starting
16:26:07 (2217284): wrapper: running run_atlas (--nthreads 2)
[2025-12-04 16:26:07] Arguments: --nthreads 2
[2025-12-04 16:26:07] Threads: 2
[2025-12-04 16:26:07] Checking for CVMFS
[2025-12-04 16:26:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-04 16:26:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-04 16:26:07] Running cvmfs_config stat atlas.cern.ch
[2025-12-04 16:26:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-04 16:26:07] 2.9.2.0 1434360 14494 66480 153639 0 68 34693615 36864000 0 130560 0 4660271 99.944 748718 1515 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-04 16:26:07] CVMFS is ok
[2025-12-04 16:26:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-04 16:26:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-04 16:26:07] Further information can be found at the LHC@home message board.
[2025-12-04 16:26:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-04 16:26:07] Checking for apptainer binary...
[2025-12-04 16:26:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-04 16:26:07] Running /usr/bin/apptainer --version
[2025-12-04 16:26:07] apptainer version 1.4.1-1.1
[2025-12-04 16:26:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-04 16:26:07] legendA165
[2025-12-04 16:26:07] apptainer works
[2025-12-04 16:26:07] Set ATHENA_PROC_NUMBER=2
[2025-12-04 16:26:07] Set ATHENA_CORE_NUMBER=2
[2025-12-04 16:26:07] Starting ATLAS job with PandaID=6905246298
[2025-12-04 16:26:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-05 02:34:17]  *** The last 200 lines of the pilot log: ***
[2025-12-05 02:34:17] 2025-12-05 01:33:44,956 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-05 02:34:17] 2025-12-05 01:33:45,687 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-05 02:34:17] 2025-12-05 01:33:45,688 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 3102.86875
[2025-12-05 02:34:17] 2025-12-05 01:33:45,689 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6905246298/memory_monitor_summary.json (trf name=prmon)
[2025-12-05 02:34:17] 2025-12-05 01:33:45,689 | INFO     | extracted standard info from prmon json
[2025-12-05 02:34:17] 2025-12-05 01:33:45,689 | INFO     | extracted standard memory fields from prmon json
[2025-12-05 02:34:17] 2025-12-05 01:33:45,689 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-05 02:34:17] 2025-12-05 01:33:45,693 | INFO     | fitting pss+swap vs Time
[2025-12-05 02:34:17] 2025-12-05 01:33:45,694 | INFO     | sum of square deviations: 65978159858.0
[2025-12-05 02:34:17] 2025-12-05 01:33:45,697 | INFO     | sum of deviations: 331197782544.99994
[2025-12-05 02:34:17] 2025-12-05 01:33:45,698 | INFO     | mean x: 1764880185.0
[2025-12-05 02:34:17] 2025-12-05 01:33:45,698 | INFO     | mean y: 2466350.7805695143
[2025-12-05 02:34:17] 2025-12-05 01:33:45,698 | INFO     | intersect: -8856895671.252764
[2025-12-05 02:34:17] 2025-12-05 01:33:45,698 | INFO     | chi2: 3.804559886482873
[2025-12-05 02:34:17] 2025-12-05 01:33:45,698 | INFO     | sum of square deviations: 64334259268.0
[2025-12-05 02:34:17] 2025-12-05 01:33:45,702 | INFO     | sum of deviations: 399443982060.9999
[2025-12-05 02:34:17] 2025-12-05 01:33:45,702 | INFO     | mean x: 1764880032.5
[2025-12-05 02:34:17] 2025-12-05 01:33:45,702 | INFO     | mean y: 2472654.006756757
[2025-12-05 02:34:17] 2025-12-05 01:33:45,702 | INFO     | intersect: -10955463538.357254
[2025-12-05 02:34:17] 2025-12-05 01:33:45,702 | INFO     | chi2: 2.794132287434569
[2025-12-05 02:34:17] 2025-12-05 01:33:45,702 | INFO     | current chi2=2.794132287434569 (change=26.558330771404798 %)
[2025-12-05 02:34:17] 2025-12-05 01:33:45,703 | INFO     | sum of square deviations: 62717894078.0
[2025-12-05 02:34:17] 2025-12-05 01:33:45,706 | INFO     | sum of deviations: 394691237454.9998
[2025-12-05 02:34:17] 2025-12-05 01:33:45,706 | INFO     | mean x: 1764879880.0
[2025-12-05 02:34:17] 2025-12-05 01:33:45,706 | INFO     | mean y: 2472205.4957410563
[2025-12-05 02:34:17] 2025-12-05 01:33:45,706 | INFO     | intersect: -11104128773.968216
[2025-12-05 02:34:17] 2025-12-05 01:33:45,707 | INFO     | chi2: 2.793221456981117
[2025-12-05 02:34:17] 2025-12-05 01:33:45,707 | INFO     | current chi2=2.793221456981117 (change=0.032597971740566736 %)
[2025-12-05 02:34:17] 2025-12-05 01:33:45,707 | INFO     | right removable region: 586
[2025-12-05 02:34:17] 2025-12-05 01:33:45,707 | INFO     | sum of square deviations: 64334259268.0
[2025-12-05 02:34:17] 2025-12-05 01:33:45,711 | INFO     | sum of deviations: 180038972282.0
[2025-12-05 02:34:17] 2025-12-05 01:33:45,711 | INFO     | mean x: 1764880337.5
[2025-12-05 02:34:17] 2025-12-05 01:33:45,711 | INFO     | mean y: 2480359.222972973
[2025-12-05 02:34:17] 2025-12-05 01:33:45,711 | INFO     | intersect: -4936524857.89713
[2025-12-05 02:34:17] 2025-12-05 01:33:45,711 | INFO     | chi2: 1.4099749534898542
[2025-12-05 02:34:17] 2025-12-05 01:33:45,711 | INFO     | current chi2=1.4099749534898542 (change=62.93986701328268 %)
[2025-12-05 02:34:17] 2025-12-05 01:33:45,712 | INFO     | sum of square deviations: 62717894078.0
[2025-12-05 02:34:17] 2025-12-05 01:33:45,715 | INFO     | sum of deviations: 134888707262.99997
[2025-12-05 02:34:17] 2025-12-05 01:33:45,715 | INFO     | mean x: 1764880490.0
[2025-12-05 02:34:17] 2025-12-05 01:33:45,715 | INFO     | mean y: 2484602.8977853493
[2025-12-05 02:34:17] 2025-12-05 01:33:45,715 | INFO     | intersect: -3793281362.6131134
[2025-12-05 02:34:17] 2025-12-05 01:33:45,715 | INFO     | chi2: 1.0693734908981969
[2025-12-05 02:34:17] 2025-12-05 01:33:45,716 | INFO     | current chi2=1.0693734908981969 (change=24.15656120334823 %)
[2025-12-05 02:34:17] 2025-12-05 01:33:45,716 | INFO     | left removable region: 20
[2025-12-05 02:34:17] 2025-12-05 01:33:45,716 | INFO     | sum of square deviations: 56224598377.5
[2025-12-05 02:34:17] 2025-12-05 01:33:45,719 | INFO     | sum of deviations: 175441079927.5
[2025-12-05 02:34:17] 2025-12-05 01:33:45,719 | INFO     | mean x: 1764880459.5
[2025-12-05 02:34:17] 2025-12-05 01:33:45,719 | INFO     | mean y: 2493285.3268551235
[2025-12-05 02:34:17] 2025-12-05 01:33:45,719 | INFO     | intersect: -5504571997.357875
[2025-12-05 02:34:17] 2025-12-05 01:33:45,720 | INFO     | chi2: 0.03736366206871769
[2025-12-05 02:34:17] 2025-12-05 01:33:45,720 | INFO     | current memory leak: 3.12 B/s (using 566 data points, chi2=0.04)
[2025-12-05 02:34:17] 2025-12-05 01:33:45,720 | INFO     | could have reported an average CPU frequency of 4529 MHz (24 samples)
[2025-12-05 02:34:17] 2025-12-05 01:33:45,720 | INFO     | ..............................
[2025-12-05 02:34:17] 2025-12-05 01:33:45,720 | INFO     | . Timing measurements:
[2025-12-05 02:34:17] 2025-12-05 01:33:45,720 | INFO     | . get job = 0 s
[2025-12-05 02:34:17] 2025-12-05 01:33:45,720 | INFO     | . initial setup = 1 s
[2025-12-05 02:34:17] 2025-12-05 01:33:45,720 | INFO     | . payload setup = 8 s
[2025-12-05 02:34:17] 2025-12-05 01:33:45,720 | INFO     | . stage-in = 0 s
[2025-12-05 02:34:17] 2025-12-05 01:33:45,720 | INFO     | . payload execution = 36408 s
[2025-12-05 02:34:17] 2025-12-05 01:33:45,720 | INFO     | . stage-out = 0 s
[2025-12-05 02:34:17] 2025-12-05 01:33:45,720 | INFO     | . log creation = 0 s
[2025-12-05 02:34:17] 2025-12-05 01:33:45,720 | INFO     | ..............................
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | 
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | job summary report
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | --------------------------------------------------
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | PanDA job id: 6905246298
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | task id: 47530725
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | errors: (none)
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | pilot state: finished 
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | transexitcode: 0
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | exeerrorcode: 0
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | exeerrordiag: 
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | exitcode: 0
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | exitmsg: OK
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | cpuconsumptiontime: 71896 s
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | nevents: 1000
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | neventsw: 0
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | pid: 2228116
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | pgrp: 2228116
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | corecount: 2
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | event service: False
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | sizes: {0: 2284396, 5: 2284658, 11: 2284714, 36420: 2346462, 36422: 2355518, 36430: 2355708}
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | --------------------------------------------------
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | 
[2025-12-05 02:34:17] 2025-12-05 01:33:45,750 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-05 02:34:17] 2025-12-05 01:33:45,760 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-05 02:34:17] 2025-12-05 01:33:45,760 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-05 02:34:17] 2025-12-05 01:33:45,760 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-05 02:34:17] 2025-12-05 01:33:45,760 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-05 02:34:17] 2025-12-05 01:33:45,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-05 02:34:17] 2025-12-05 01:33:45,760 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-05 02:34:17] 2025-12-05 01:33:45,760 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-05 02:34:17] 2025-12-05 01:33:45,760 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-05 02:34:17] 2025-12-05 01:33:45,761 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-05 02:34:17] 2025-12-05 01:33:45,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-05 02:34:17] 2025-12-05 01:33:45,761 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-05 02:34:17] 2025-12-05 01:33:45,761 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-05 02:34:17] 2025-12-05 01:33:45,761 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-05 02:34:17] 2025-12-05 01:33:45,761 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-05 02:34:17] 2025-12-05 01:33:45,761 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-05 02:34:17] 2025-12-05 01:33:45,761 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-05 02:34:17] 2025-12-05 01:33:45,761 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-05 02:34:17] 2025-12-05 01:33:45,761 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-05 02:34:17] 2025-12-05 01:33:45,761 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-05 02:34:17] 2025-12-05 01:33:45,761 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-05 02:34:17] 2025-12-05 01:33:45,761 | INFO     | job 6905246298 has completed (purged errors)
[2025-12-05 02:34:17] 2025-12-05 01:33:45,761 | INFO     | overall cleanup function is called
[2025-12-05 02:34:17] 2025-12-05 01:33:46,766 | INFO     | --- collectZombieJob: --- 10, [2228116]
[2025-12-05 02:34:17] 2025-12-05 01:33:46,766 | INFO     | zombie collector waiting for pid 2228116
[2025-12-05 02:34:17] 2025-12-05 01:33:46,766 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-05 02:34:17] 2025-12-05 01:33:46,766 | INFO     | collected zombie processes
[2025-12-05 02:34:17] 2025-12-05 01:33:46,767 | INFO     | will attempt to kill all subprocesses of pid=2228116
[2025-12-05 02:34:17] 2025-12-05 01:33:46,810 | INFO     | process IDs to be killed: [2228116] (in reverse order)
[2025-12-05 02:34:17] 2025-12-05 01:33:46,832 | WARNING  | found no corresponding commands to process id(s)
[2025-12-05 02:34:17] 2025-12-05 01:33:46,832 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-05 02:34:17] 2025-12-05 01:33:46,833 | INFO     | did not find any defunct processes belonging to 2228116
[2025-12-05 02:34:17] 2025-12-05 01:33:46,834 | INFO     | did not find any defunct processes belonging to 2228116
[2025-12-05 02:34:17] 2025-12-05 01:33:46,835 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-05 02:34:17] 2025-12-05 01:33:46,835 | INFO     | ready for new job
[2025-12-05 02:34:17] 2025-12-05 01:33:46,835 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-05 02:34:17] 2025-12-05 01:33:46,836 | INFO     | ***************************************
[2025-12-05 02:34:17] 2025-12-05 01:33:46,836 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-05 02:34:17] 2025-12-05 01:33:46,836 | INFO     | ***************************************
[2025-12-05 02:34:17] 2025-12-05 01:33:46,836 | INFO     | 
[2025-12-05 02:34:17] 2025-12-05 01:33:46,836 | INFO     | architecture information:
[2025-12-05 02:34:17] 2025-12-05 01:33:46,837 | INFO     | executing command: cat /etc/os-release
[2025-12-05 02:34:17] 2025-12-05 01:33:46,845 | INFO     | cat /etc/os-release:
[2025-12-05 02:34:17] NAME="CentOS Linux"
[2025-12-05 02:34:17] VERSION="7 (Core)"
[2025-12-05 02:34:17] ID="centos"
[2025-12-05 02:34:17] ID_LIKE="rhel fedora"
[2025-12-05 02:34:17] VERSION_ID="7"
[2025-12-05 02:34:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-05 02:34:17] ANSI_COLOR="0;31"
[2025-12-05 02:34:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-05 02:34:17] HOME_URL="https://www.centos.org/"
[2025-12-05 02:34:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-05 02:34:17] 
[2025-12-05 02:34:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-05 02:34:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-05 02:34:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-05 02:34:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-05 02:34:17] 
[2025-12-05 02:34:17] 2025-12-05 01:33:46,845 | INFO     | ***************************************
[2025-12-05 02:34:17] 2025-12-05 01:33:47,348 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-05 02:34:17] 2025-12-05 01:33:47,359 | INFO     | sufficient remaining disk space (174796570624 B)
[2025-12-05 02:34:17] 2025-12-05 01:33:47,360 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-05 02:34:17] 2025-12-05 01:33:47,360 | INFO     | current server update state: UPDATING_FINAL
[2025-12-05 02:34:17] 2025-12-05 01:33:47,360 | INFO     | update_server=False
[2025-12-05 02:34:17] 2025-12-05 01:33:47,360 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-05 02:34:17] 2025-12-05 01:33:47,360 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-05 02:34:17] 2025-12-05 01:33:47,459 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-05 02:34:17] 2025-12-05 01:33:47,460 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-05 02:34:17] 2025-12-05 01:33:47,460 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-05 02:34:17] 2025-12-05 01:33:47,460 | INFO     | will abort loop
[2025-12-05 02:34:17] 2025-12-05 01:33:47,775 | INFO     | all job control threads have been joined
[2025-12-05 02:34:17] 2025-12-05 01:33:48,065 | INFO     | all data control threads have been joined
[2025-12-05 02:34:17] 2025-12-05 01:33:48,102 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-05 02:34:17] 2025-12-05 01:33:48,126 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-05 02:34:17] 2025-12-05 01:33:48,366 | INFO     | [job] queue monitor thread has finished
[2025-12-05 02:34:17] 2025-12-05 01:33:48,366 | INFO     | [job] retrieve thread has finished
[2025-12-05 02:34:17] 2025-12-05 01:33:48,396 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-05 02:34:17] 2025-12-05 01:33:48,399 | INFO     | [payload] execute_payloads thread has finished
[2025-12-05 02:34:17] 2025-12-05 01:33:48,466 | INFO     | [job] job monitor thread has finished
[2025-12-05 02:34:17] 2025-12-05 01:33:48,781 | INFO     | [job] control thread has finished
[2025-12-05 02:34:17] 2025-12-05 01:33:48,859 | INFO     | [data] copytool_in thread has finished
[2025-12-05 02:34:17] 2025-12-05 01:33:48,868 | INFO     | all payload control threads have been joined
[2025-12-05 02:34:17] 2025-12-05 01:33:49,071 | INFO     | [data] control thread has finished
[2025-12-05 02:34:17] 2025-12-05 01:33:49,225 | INFO     | [job] create_data_payload thread has finished
[2025-12-05 02:34:17] 2025-12-05 01:33:49,241 | INFO     | [payload] validate_post thread has finished
[2025-12-05 02:34:17] 2025-12-05 01:33:49,348 | INFO     | [payload] validate_pre thread has finished
[2025-12-05 02:34:17] 2025-12-05 01:33:49,461 | INFO     | [job] validate thread has finished
[2025-12-05 02:34:17] 2025-12-05 01:33:49,610 | INFO     | [payload] failed_post thread has finished
[2025-12-05 02:34:17] 2025-12-05 01:33:49,874 | INFO     | [payload] control thread has finished
[2025-12-05 02:34:17] 2025-12-05 01:33:50,109 | INFO     | [data] copytool_out thread has finished
[2025-12-05 02:34:17] 2025-12-05 01:33:52,133 | INFO     | [data] queue_monitor thread has finished
[2025-12-05 02:34:17] 2025-12-05 01:34:10,263 | INFO     | [monitor] cgroup control has ended
[2025-12-05 02:34:17] 2025-12-05 01:34:10,792 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140051430512448)>', '<ExcThread(monitor, started 140050419410688)>']
[2025-12-05 02:34:17] 2025-12-05 01:34:15,809 | INFO     | all workflow threads have been joined
[2025-12-05 02:34:17] 2025-12-05 01:34:15,810 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-05 02:34:17] 2025-12-05 01:34:15,810 | INFO     | traces error code: 0
[2025-12-05 02:34:17] 2025-12-05 01:34:15,811 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-05 02:34:17] 2025-12-05 01:34:16,056 | INFO     | 36448s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-05 02:34:17] 2025-12-05 01:34:17,117 | INFO     | PID=2221003 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-05 02:34:17] 2025-12-05 01:34:17,117 | INFO     | found 0 job(s) in 20 queues
[2025-12-05 02:34:17] 2025-12-05 01:34:17,118 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-05 02:34:17] 2025-12-05 01:34:17,118 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-05 02:34:17] 2025-12-05 01:34:17,118 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-05 02:34:17] 2025-12-05 01:34:17,118 | INFO     | [monitor] control thread has ended
[2025-12-05 02:34:17] 2025-12-05 01:34:17,155 [wrapper] ==== pilot stdout END ====
[2025-12-05 02:34:17] 2025-12-05 01:34:17,158 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-05 02:34:17] 2025-12-05 01:34:17,160 [wrapper] pilotpid: 2221003
[2025-12-05 02:34:17] 2025-12-05 01:34:17,162 [wrapper] Pilot exit status: 0
[2025-12-05 02:34:17] 2025-12-05 01:34:17,167 [wrapper] pandaids: 6905246298
[2025-12-05 02:34:17] 2025-12-05 01:34:17,180 [wrapper] cleanup supervisor_pilot 2316183 2221004
[2025-12-05 02:34:17] 2025-12-05 01:34:17,182 [wrapper] Test setup, not cleaning
[2025-12-05 02:34:17] 2025-12-05 01:34:17,184 [wrapper] apfmon messages muted
[2025-12-05 02:34:17] 2025-12-05 01:34:17,186 [wrapper] ==== wrapper stdout END ====
[2025-12-05 02:34:17] 2025-12-05 01:34:17,188 [wrapper] ==== wrapper stderr END ====
[2025-12-05 02:34:17]  *** Error codes and diagnostics ***
[2025-12-05 02:34:17]     "exeErrorCode": 0,
[2025-12-05 02:34:17]     "exeErrorDiag": "",
[2025-12-05 02:34:17]     "pilotErrorCode": 0,
[2025-12-05 02:34:17]     "pilotErrorDiag": "",
[2025-12-05 02:34:17]  *** Listing of results directory ***
[2025-12-05 02:34:17] total 1063996
[2025-12-05 02:34:17] -rwx------ 1 boinc boinc     36292 Nov 30 01:20 runpilot2-wrapper.sh
[2025-12-05 02:34:17] -rw-r--r-- 1 boinc boinc    576529 Nov 30 01:24 pilot3.tar.gz
[2025-12-05 02:34:17] -rw-r--r-- 1 boinc boinc      5112 Nov 30 01:24 queuedata.json
[2025-12-05 02:34:17] -rw-r--r-- 1 boinc boinc       100 Dec  4 16:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-05 02:34:17] -rwxr-xr-x 1 boinc boinc      7986 Dec  4 16:26 run_atlas
[2025-12-05 02:34:17] -rw-r--r-- 1 boinc boinc       105 Dec  4 16:26 job.xml
[2025-12-05 02:34:17] -rw-r--r-- 2 boinc boinc 376387608 Dec  4 16:26 EVNT.47530720._000026.pool.root.1
[2025-12-05 02:34:17] -rw-r--r-- 2 boinc boinc    590132 Dec  4 16:26 input.tar.gz
[2025-12-05 02:34:17] -rw-r--r-- 2 boinc boinc     15847 Dec  4 16:26 start_atlas.sh
[2025-12-05 02:34:17] drwxrwx--x 2 boinc boinc      4096 Dec  4 16:26 shared
[2025-12-05 02:34:17] -rw-r--r-- 1 boinc boinc         0 Dec  4 16:26 boinc_setup_complete
[2025-12-05 02:34:17] -rw-r--r-- 1 boinc boinc      6209 Dec  4 16:26 init_data.xml
[2025-12-05 02:34:17] -rw-r--r-- 1 boinc boinc         0 Dec  4 16:26 boinc_lockfile
[2025-12-05 02:34:17] -rw-r--r-- 1 boinc boinc      2875 Dec  4 16:26 pandaJob.out
[2025-12-05 02:34:17] -rw------- 1 boinc boinc    985572 Dec  4 16:26 agis_schedconf.cvmfs.json
[2025-12-05 02:34:17] drwx------ 5 boinc boinc      4096 Dec  4 16:26 pilot3
[2025-12-05 02:34:17] -rw-r--r-- 1 boinc boinc       531 Dec  5 02:29 boinc_task_state.xml
[2025-12-05 02:34:17] -rw------- 1 boinc boinc 696540491 Dec  5 02:33 HITS.47530725._001651.pool.root.1
[2025-12-05 02:34:17] -rw------- 1 boinc boinc      1017 Dec  5 02:33 memory_monitor_summary.json
[2025-12-05 02:34:17] -rw------- 1 boinc boinc   1516240 Dec  5 02:33 agis_ddmendpoints.agis.ALL.json
[2025-12-05 02:34:17] -rw------- 1 boinc boinc   1213063 Dec  5 02:33 log.47530725._001651.job.log.tgz.1
[2025-12-05 02:34:17] -rw------- 1 boinc boinc        95 Dec  5 02:33 pilot_heartbeat.json
[2025-12-05 02:34:17] -rw------- 1 boinc boinc     28240 Dec  5 02:33 heartbeat.json
[2025-12-05 02:34:17] -rw-r--r-- 1 boinc boinc      8192 Dec  5 02:34 boinc_mmap_file
[2025-12-05 02:34:17] -rw-r--r-- 1 boinc boinc        28 Dec  5 02:34 wrapper_checkpoint.txt
[2025-12-05 02:34:17] -rw------- 1 boinc boinc       863 Dec  5 02:34 pilotlog.txt
[2025-12-05 02:34:17] -rw------- 1 boinc boinc   5119143 Dec  5 02:34 log.47530725._001651.job.log.1
[2025-12-05 02:34:17] -rw------- 1 boinc boinc       353 Dec  5 02:34 output.list
[2025-12-05 02:34:17] -rw-r--r-- 1 boinc boinc       620 Dec  5 02:34 runtime_log
[2025-12-05 02:34:17] -rw------- 1 boinc boinc   6369280 Dec  5 02:34 result.tar.gz
[2025-12-05 02:34:17] -rw-r--r-- 1 boinc boinc      8918 Dec  5 02:34 runtime_log.err
[2025-12-05 02:34:17] -rw------- 1 boinc boinc       669 Dec  5 02:34 pSyMDmZMkj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjVPKDmrWwNrn.diag
[2025-12-05 02:34:17] -rw-r--r-- 1 boinc boinc     21249 Dec  5 02:34 stderr.txt
[2025-12-05 02:34:17] HITS file was successfully produced:
[2025-12-05 02:34:17] -rw------- 1 boinc boinc 696540491 Dec  5 02:33 shared/HITS.pool.root.1
[2025-12-05 02:34:17]  *** Contents of shared directory: ***
[2025-12-05 02:34:17] total 1054608
[2025-12-05 02:34:17] -rw-r--r-- 2 boinc boinc 376387608 Dec  4 16:26 ATLAS.root_0
[2025-12-05 02:34:17] -rw-r--r-- 2 boinc boinc    590132 Dec  4 16:26 input.tar.gz
[2025-12-05 02:34:17] -rw-r--r-- 2 boinc boinc     15847 Dec  4 16:26 start_atlas.sh
[2025-12-05 02:34:17] -rw------- 1 boinc boinc 696540491 Dec  5 02:33 HITS.pool.root.1
[2025-12-05 02:34:17] -rw------- 1 boinc boinc   6369280 Dec  5 02:34 result.tar.gz
02:34:18 (2217284): run_atlas exited; CPU time 72069.519062
02:34:18 (2217284): called boinc_finish(0)

</stderr_txt>
]]>

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