Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:27:04 (570719): wrapper (7.7.26015): starting
15:27:04 (570719): wrapper: running run_atlas (--nthreads 12)
[2025-12-01 15:27:04] Arguments: --nthreads 12
[2025-12-01 15:27:04] Threads: 12
[2025-12-01 15:27:04] Checking for CVMFS
[2025-12-01 15:27:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 15:27:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 15:27:06] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 15:27:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 15:27:07] 2.11.5.0 3857663 1065 91152 153537 0 64 25145384 45568000 18931 130560 0 1642643 99.384 3407092 15222 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-01 15:27:07] CVMFS is ok
[2025-12-01 15:27:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 15:27:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 15:27:08] Further information can be found at the LHC@home message board.
[2025-12-01 15:27:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 15:27:08] Checking for apptainer binary...
[2025-12-01 15:27:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 15:27:08] Running /usr/bin/apptainer --version
[2025-12-01 15:27:08] apptainer version 1.4.1-1.el9
[2025-12-01 15:27:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 15:27:09] wns0075.triumf.lcg
[2025-12-01 15:27:09] apptainer works
[2025-12-01 15:27:09] Set ATHENA_PROC_NUMBER=12
[2025-12-01 15:27:09] Set ATHENA_CORE_NUMBER=12
[2025-12-01 15:27:09] Starting ATLAS job with PandaID=6905380004
[2025-12-01 15:27:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 15:36:04]  *** The last 200 lines of the pilot log: ***
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | ..............................
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . Timing measurements:
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . get job = 1 s
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . initial setup = 5 s
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . payload setup = 37 s
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . stage-in = 0 s
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . payload execution = 228 s
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . stage-out = 1 s
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . log creation = 0 s
[2025-12-01 15:36:04] 2025-12-01 23:35:28,848 | INFO     | ..............................
[2025-12-01 15:36:04] 2025-12-01 23:35:28,848 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-01 15:36:04] 2025-12-01 23:35:28,860 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905380004/pilotlog.txt
[2025-12-01 15:36:04] 2025-12-01 23:35:28,914 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-01 15:36:04] - Log from pilotlog.txt -
[2025-12-01 15:36:04] 2025-12-01 23:35:28,841 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6905380004/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 15:36:04] 2025-12-01 23:35:28,842 | INFO     | extracted standard info from prmon json
[2025-12-01 15:36:04] 2025-12-01 23:35:28,842 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 15:36:04] 2025-12-01 23:35:28,842 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 15:36:04] 2025-12-01 23:35:28,843 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-01 15:36:04] 2025-12-01 23:35:28,843 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-01 15:36:04] 2025-12-01 23:35:28,845 | WARNING  | wrong length of table data, x=[1764631777.0, 1764631838.0, 1764631899.0, 1764631960.0], y=[1561.0, 684698.0, 837195.0, 742645.0] (must be same and length>=4)
[2025-12-01 15:36:04] 2025-12-01 23:35:28,846 | INFO     | could have reported an average CPU frequency of 1298 MHz (4 samples)
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | ..............................
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . Timing measurements:
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . get job = 1 s
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . initial setup = 5 s
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . payload setup = 37 s
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . stage-in = 0 s
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . payload execution = 228 s
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . stage-out = 1 s
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . log creation = 0 s
[2025-12-01 15:36:04] 2025-12-01 23:35:28,848 | INFO     | ..............................
[2025-12-01 15:36:04] 2025-12-01 23:35:28,848 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-01 15:36:04] 2025-12-01 23:35:28,860 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905380004/pilotlog.txt
[2025-12-01 15:36:04] 2025-12-01 23:35:28,915 | WARNING  | 
[2025-12-01 15:36:04] [begin log extracts]
[2025-12-01 15:36:04] - Log from pilotlog.txt -
[2025-12-01 15:36:04] 2025-12-01 23:35:28,841 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6905380004/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 15:36:04] 2025-12-01 23:35:28,842 | INFO     | extracted standard info from prmon json
[2025-12-01 15:36:04] 2025-12-01 23:35:28,842 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 15:36:04] 2025-12-01 23:35:28,842 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 15:36:04] 2025-12-01 23:35:28,843 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-01 15:36:04] 2025-12-01 23:35:28,843 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-01 15:36:04] 2025-12-01 23:35:28,845 | WARNING  | wrong length of table data, x=[1764631777.0, 1764631838.0, 1764631899.0, 1764631960.0], y=[1561.0, 684698.0, 837195.0, 742645.0] (must be same and length>=4)
[2025-12-01 15:36:04] 2025-12-01 23:35:28,846 | INFO     | could have reported an average CPU frequency of 1298 MHz (4 samples)
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | ..............................
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . Timing measurements:
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . get job = 1 s
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . initial setup = 5 s
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . payload setup = 37 s
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . stage-in = 0 s
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . payload execution = 228 s
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . stage-out = 1 s
[2025-12-01 15:36:04] 2025-12-01 23:35:28,847 | INFO     | . log creation = 0 s
[2025-12-01 15:36:04] 2025-12-01 23:35:28,848 | INFO     | ..............................
[2025-12-01 15:36:04] 2025-12-01 23:35:28,848 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-01 15:36:04] 2025-12-01 23:35:28,860 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905380004/pilotlog.txt
[2025-12-01 15:36:04] [end log extracts]
[2025-12-01 15:36:04] 2025-12-01 23:35:28,915 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-12-01 15:36:04] 2025-12-01 23:35:28,916 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-01 15:36:04] 2025-12-01 23:35:29,659 | INFO     | time since job start (463s) is within the limit (172800.0s)
[2025-12-01 15:36:04] 2025-12-01 23:35:29,705 | INFO     | 
[2025-12-01 15:36:04] 2025-12-01 23:35:29,706 | INFO     | job summary report
[2025-12-01 15:36:04] 2025-12-01 23:35:29,707 | INFO     | --------------------------------------------------
[2025-12-01 15:36:04] 2025-12-01 23:35:29,707 | INFO     | PanDA job id: 6905380004
[2025-12-01 15:36:04] 2025-12-01 23:35:29,707 | INFO     | task id: 47530725
[2025-12-01 15:36:04] 2025-12-01 23:35:29,707 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-01 15:32:53,782 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-01 15:36:04] 2025-12-01 23:35:29,707 | INFO     | error 2/2: 1165: Local output file is missing
[2025-12-01 15:36:04] 2025-12-01 23:35:29,707 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 15:36:04] 2025-12-01 23:35:29,707 | INFO     | pilot state: failed 
[2025-12-01 15:36:04] 2025-12-01 23:35:29,707 | INFO     | transexitcode: 65
[2025-12-01 15:36:04] 2025-12-01 23:35:29,707 | INFO     | exeerrorcode: 65
[2025-12-01 15:36:04] 2025-12-01 23:35:29,707 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-12-01 15:36:04] 2025-12-01 23:35:29,708 | INFO     | exitcode: 65
[2025-12-01 15:36:04] 2025-12-01 23:35:29,708 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-12-01 15:36:04] 2025-12-01 23:35:29,708 | INFO     | cpuconsumptiontime: 117 s
[2025-12-01 15:36:04] 2025-12-01 23:35:29,708 | INFO     | nevents: 0
[2025-12-01 15:36:04] 2025-12-01 23:35:29,708 | INFO     | neventsw: 0
[2025-12-01 15:36:04] 2025-12-01 23:35:29,708 | INFO     | pid: 581813
[2025-12-01 15:36:04] 2025-12-01 23:35:29,708 | INFO     | pgrp: 581813
[2025-12-01 15:36:04] 2025-12-01 23:35:29,708 | INFO     | corecount: 12
[2025-12-01 15:36:04] 2025-12-01 23:35:29,708 | INFO     | event service: False
[2025-12-01 15:36:04] 2025-12-01 23:35:29,708 | INFO     | sizes: {0: 2284168, 1: 2284252, 2: 2284451, 13: 2284451, 21: 2284769, 24: 2284797, 269: 2308640, 270: 2308644, 272: 2313046, 417: 2313184}
[2025-12-01 15:36:04] 2025-12-01 23:35:29,708 | INFO     | --------------------------------------------------
[2025-12-01 15:36:04] 2025-12-01 23:35:29,709 | INFO     | 
[2025-12-01 15:36:04] 2025-12-01 23:35:29,709 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-01 15:36:04] 2025-12-01 23:35:29,913 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 15:36:04] 2025-12-01 23:35:29,913 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 15:36:04] 2025-12-01 23:35:29,913 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 15:36:04] 2025-12-01 23:35:29,913 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 15:36:04] 2025-12-01 23:35:29,913 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 15:36:04] 2025-12-01 23:35:29,914 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 15:36:04] 2025-12-01 23:35:29,914 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 15:36:04] 2025-12-01 23:35:29,914 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 15:36:04] 2025-12-01 23:35:29,914 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 15:36:04] 2025-12-01 23:35:29,914 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 15:36:04] 2025-12-01 23:35:29,914 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 15:36:04] 2025-12-01 23:35:29,914 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 15:36:04] 2025-12-01 23:35:29,914 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 15:36:04] 2025-12-01 23:35:29,914 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 15:36:04] 2025-12-01 23:35:29,914 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 15:36:04] 2025-12-01 23:35:29,915 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 15:36:04] 2025-12-01 23:35:29,915 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 15:36:04] 2025-12-01 23:35:29,915 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 15:36:04] 2025-12-01 23:35:29,915 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 15:36:04] 2025-12-01 23:35:29,915 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 15:36:04] 2025-12-01 23:35:29,915 | INFO     | job 6905380004 has completed (purged errors)
[2025-12-01 15:36:04] 2025-12-01 23:35:29,915 | INFO     | overall cleanup function is called
[2025-12-01 15:36:04] 2025-12-01 23:35:30,932 | INFO     | --- collectZombieJob: --- 10, [581813]
[2025-12-01 15:36:04] 2025-12-01 23:35:30,932 | INFO     | zombie collector waiting for pid 581813
[2025-12-01 15:36:04] 2025-12-01 23:35:30,933 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 15:36:04] 2025-12-01 23:35:30,933 | INFO     | collected zombie processes
[2025-12-01 15:36:04] 2025-12-01 23:35:30,933 | INFO     | will attempt to kill all subprocesses of pid=581813
[2025-12-01 15:36:04] 2025-12-01 23:35:31,950 | INFO     | process IDs to be killed: [581813] (in reverse order)
[2025-12-01 15:36:04] 2025-12-01 23:35:32,061 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 15:36:04] 2025-12-01 23:35:32,061 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 15:36:04] 2025-12-01 23:35:32,081 | INFO     | did not find any defunct processes belonging to 581813
[2025-12-01 15:36:04] 2025-12-01 23:35:32,092 | INFO     | did not find any defunct processes belonging to 581813
[2025-12-01 15:36:04] 2025-12-01 23:35:32,093 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 15:36:04] 2025-12-01 23:35:32,094 | INFO     | ready for new job
[2025-12-01 15:36:04] 2025-12-01 23:35:32,094 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 15:36:04] 2025-12-01 23:35:32,097 | INFO     | ***************************************
[2025-12-01 15:36:04] 2025-12-01 23:35:32,097 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 15:36:04] 2025-12-01 23:35:32,097 | INFO     | ***************************************
[2025-12-01 15:36:04] 2025-12-01 23:35:32,097 | INFO     | 
[2025-12-01 15:36:04] 2025-12-01 23:35:32,109 | INFO     | architecture information:
[2025-12-01 15:36:04] 2025-12-01 23:35:32,123 | INFO     | executing command: cat /etc/os-release
[2025-12-01 15:36:04] 2025-12-01 23:35:32,212 | INFO     | cat /etc/os-release:
[2025-12-01 15:36:04] NAME="CentOS Linux"
[2025-12-01 15:36:04] VERSION="7 (Core)"
[2025-12-01 15:36:04] ID="centos"
[2025-12-01 15:36:04] ID_LIKE="rhel fedora"
[2025-12-01 15:36:04] VERSION_ID="7"
[2025-12-01 15:36:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 15:36:04] ANSI_COLOR="0;31"
[2025-12-01 15:36:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 15:36:04] HOME_URL="https://www.centos.org/"
[2025-12-01 15:36:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 15:36:04] 
[2025-12-01 15:36:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 15:36:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 15:36:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 15:36:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 15:36:04] 
[2025-12-01 15:36:04] 2025-12-01 23:35:32,213 | INFO     | ***************************************
[2025-12-01 15:36:04] 2025-12-01 23:35:32,716 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-01 15:36:04] 2025-12-01 23:35:32,780 | INFO     | sufficient remaining disk space (1950652301312 B)
[2025-12-01 15:36:04] 2025-12-01 23:35:32,780 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 15:36:04] 2025-12-01 23:35:32,781 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 15:36:04] 2025-12-01 23:35:32,781 | INFO     | update_server=False
[2025-12-01 15:36:04] 2025-12-01 23:35:32,781 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 15:36:04] 2025-12-01 23:35:32,782 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 15:36:04] 2025-12-01 23:35:32,969 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-01 15:36:04] 2025-12-01 23:35:32,969 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-01 15:36:04] 2025-12-01 23:35:32,970 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 15:36:04] 2025-12-01 23:35:32,970 | INFO     | will abort loop
[2025-12-01 15:36:04] 2025-12-01 23:35:33,252 | INFO     | all payload control threads have been joined
[2025-12-01 15:36:04] 2025-12-01 23:35:33,393 | INFO     | all data control threads have been joined
[2025-12-01 15:36:04] 2025-12-01 23:35:33,790 | INFO     | [job] retrieve thread has finished
[2025-12-01 15:36:04] 2025-12-01 23:35:33,922 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 15:36:04] 2025-12-01 23:35:33,979 | INFO     | [job] job monitor thread has finished
[2025-12-01 15:36:04] 2025-12-01 23:35:34,208 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 15:36:04] 2025-12-01 23:35:34,245 | INFO     | [data] copytool_in thread has finished
[2025-12-01 15:36:04] 2025-12-01 23:35:34,258 | INFO     | [payload] control thread has finished
[2025-12-01 15:36:04] 2025-12-01 23:35:34,309 | INFO     | [payload] failed_post thread has finished
[2025-12-01 15:36:04] 2025-12-01 23:35:34,368 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 15:36:04] 2025-12-01 23:35:34,382 | INFO     | all job control threads have been joined
[2025-12-01 15:36:04] 2025-12-01 23:35:34,398 | INFO     | [data] control thread has finished
[2025-12-01 15:36:04] 2025-12-01 23:35:34,721 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 15:36:04] 2025-12-01 23:35:34,722 | INFO     | [job] validate thread has finished
[2025-12-01 15:36:04] 2025-12-01 23:35:34,789 | INFO     | [data] copytool_out thread has finished
[2025-12-01 15:36:04] 2025-12-01 23:35:34,952 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 15:36:04] 2025-12-01 23:35:34,989 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 15:36:04] 2025-12-01 23:35:35,121 | INFO     | [payload] validate_post thread has finished
[2025-12-01 15:36:04] 2025-12-01 23:35:35,373 | INFO     | [job] queue monitor thread has finished
[2025-12-01 15:36:04] 2025-12-01 23:35:35,388 | INFO     | [job] control thread has finished
[2025-12-01 15:36:04] 2025-12-01 23:35:38,961 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 15:36:04] 2025-12-01 23:35:45,405 | INFO     | [monitor] cgroup control has ended
[2025-12-01 15:36:04] 2025-12-01 23:35:47,310 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140027724097344)>', '<ExcThread(monitor, started 140027174565632)>']
[2025-12-01 15:36:04] 2025-12-01 23:35:52,336 | INFO     | all workflow threads have been joined
[2025-12-01 15:36:04] 2025-12-01 23:35:52,336 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 15:36:04] 2025-12-01 23:35:52,337 | INFO     | traces error code: 0
[2025-12-01 15:36:04] 2025-12-01 23:35:52,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 15:36:04] 2025-12-01 23:36:03,234 | INFO     | PID=574456 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-01 15:36:04] 2025-12-01 23:36:03,234 | INFO     | .. there are 21 such processes running
[2025-12-01 15:36:04] 2025-12-01 23:36:03,235 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 15:36:04] 2025-12-01 23:36:03,235 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 15:36:04] 2025-12-01 23:36:03,236 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 15:36:04] 2025-12-01 23:36:03,236 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 15:36:04] 2025-12-01 23:36:03,236 | INFO     | [monitor] control thread has ended
[2025-12-01 15:36:04] 2025-12-01 23:36:03,394 [wrapper] ==== pilot stdout END ====
[2025-12-01 15:36:04] 2025-12-01 23:36:03,397 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 15:36:04] 2025-12-01 23:36:03,400 [wrapper] pilotpid: 574456
[2025-12-01 15:36:04] 2025-12-01 23:36:03,404 [wrapper] Pilot exit status: 0
[2025-12-01 15:36:04] 2025-12-01 23:36:03,507 [wrapper] pandaids: 6905380004
[2025-12-01 15:36:04] 2025-12-01 23:36:03,583 [wrapper] cleanup supervisor_pilot  574462 574457
[2025-12-01 15:36:04] 2025-12-01 23:36:03,588 [wrapper] Test setup, not cleaning
[2025-12-01 15:36:04] 2025-12-01 23:36:03,592 [wrapper] apfmon messages muted
[2025-12-01 15:36:04] 2025-12-01 23:36:03,596 [wrapper] ==== wrapper stdout END ====
[2025-12-01 15:36:04] 2025-12-01 23:36:03,599 [wrapper] ==== wrapper stderr END ====
[2025-12-01 15:36:04]  *** Error codes and diagnostics ***
[2025-12-01 15:36:04]     "exeErrorCode": 65,
[2025-12-01 15:36:04]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-12-01 15:36:04]     "pilotErrorCode": 1305,
[2025-12-01 15:36:04]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-12-01 15:36:04]  *** Listing of results directory ***
[2025-12-01 15:36:04] total 368896
[2025-12-01 15:36:04] -rw-r--r--. 1 boinc boinc    576529 Nov 29 16:16 pilot3.tar.gz
[2025-12-01 15:36:04] -rwx------. 1 boinc boinc     36292 Nov 29 16:18 runpilot2-wrapper.sh
[2025-12-01 15:36:04] -rw-r--r--. 1 boinc boinc      5112 Nov 29 16:23 queuedata.json
[2025-12-01 15:36:04] -rw-r--r--. 1 boinc boinc       100 Dec  1 15:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 15:36:04] -rwxr-xr-x. 1 boinc boinc      7986 Dec  1 15:27 run_atlas
[2025-12-01 15:36:04] -rw-r--r--. 1 boinc boinc       105 Dec  1 15:27 job.xml
[2025-12-01 15:36:04] -rw-r--r--. 1 boinc boinc      6596 Dec  1 15:27 init_data.xml
[2025-12-01 15:36:04] -rw-r--r--. 2 boinc boinc 373496369 Dec  1 15:27 EVNT.47530720._000069.pool.root.1
[2025-12-01 15:36:04] -rw-r--r--. 2 boinc boinc     15847 Dec  1 15:27 start_atlas.sh
[2025-12-01 15:36:04] drwxrwx--x. 2 boinc boinc      4096 Dec  1 15:27 shared
[2025-12-01 15:36:04] -rw-r--r--. 2 boinc boinc    590132 Dec  1 15:27 input.tar.gz
[2025-12-01 15:36:04] -rw-r--r--. 1 boinc boinc         0 Dec  1 15:27 boinc_lockfile
[2025-12-01 15:36:04] -rw-r--r--. 1 boinc boinc      2877 Dec  1 15:27 pandaJob.out
[2025-12-01 15:36:04] -rw-------. 1 boinc boinc    992016 Dec  1 15:27 agis_schedconf.cvmfs.json
[2025-12-01 15:36:04] -rw-------. 1 boinc boinc   1516240 Dec  1 15:27 agis_ddmendpoints.agis.ALL.json
[2025-12-01 15:36:04] drwx------. 5 boinc boinc      4096 Dec  1 15:27 pilot3
[2025-12-01 15:36:04] -rw-r--r--. 1 boinc boinc       524 Dec  1 15:31 boinc_task_state.xml
[2025-12-01 15:36:04] -rw-------. 1 boinc boinc       999 Dec  1 15:32 memory_monitor_summary.json
[2025-12-01 15:36:04] -rw-------. 1 boinc boinc     51629 Dec  1 15:33 log.47530725._002496.job.log.tgz.1
[2025-12-01 15:36:04] -rw-------. 1 boinc boinc      9940 Dec  1 15:35 heartbeat.json
[2025-12-01 15:36:04] -rw-r--r--. 1 boinc boinc      8192 Dec  1 15:36 boinc_mmap_file
[2025-12-01 15:36:04] -rw-r--r--. 1 boinc boinc        23 Dec  1 15:36 wrapper_checkpoint.txt
[2025-12-01 15:36:04] -rw-------. 1 boinc boinc        95 Dec  1 15:36 pilot_heartbeat.json
[2025-12-01 15:36:04] -rw-------. 1 boinc boinc       822 Dec  1 15:36 pilotlog.txt
[2025-12-01 15:36:04] -rw-------. 1 boinc boinc    121491 Dec  1 15:36 log.47530725._002496.job.log.1
[2025-12-01 15:36:04] -rw-------. 1 boinc boinc       186 Dec  1 15:36 output.list
[2025-12-01 15:36:04] -rw-r--r--. 1 boinc boinc       620 Dec  1 15:36 runtime_log
[2025-12-01 15:36:04] -rw-------. 1 boinc boinc    194560 Dec  1 15:36 result.tar.gz
[2025-12-01 15:36:04] -rw-r--r--. 1 boinc boinc      8636 Dec  1 15:36 runtime_log.err
[2025-12-01 15:36:04] -rw-------. 1 boinc boinc       648 Dec  1 15:36 bdANDmAKkj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmi2LKDmahk2Em.diag
[2025-12-01 15:36:04] -rw-r--r--. 1 boinc boinc     22542 Dec  1 15:36 stderr.txt
[2025-12-01 15:36:04] No HITS result produced
[2025-12-01 15:36:04]  *** Contents of shared directory: ***
[2025-12-01 15:36:04] total 365532
[2025-12-01 15:36:04] -rw-r--r--. 2 boinc boinc 373496369 Dec  1 15:27 ATLAS.root_0
[2025-12-01 15:36:04] -rw-r--r--. 2 boinc boinc     15847 Dec  1 15:27 start_atlas.sh
[2025-12-01 15:36:04] -rw-r--r--. 2 boinc boinc    590132 Dec  1 15:27 input.tar.gz
[2025-12-01 15:36:04] -rw-------. 1 boinc boinc    194560 Dec  1 15:36 result.tar.gz
15:36:05 (570719): run_atlas exited; CPU time 118.194719
15:36:05 (570719): called boinc_finish(0)

</stderr_txt>
]]>

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