Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:45:55 (221711): wrapper (7.7.26015): starting
03:45:55 (221711): wrapper: running run_atlas (--nthreads 4)
[2025-12-04 03:45:55] Arguments: --nthreads 4
[2025-12-04 03:45:55] Threads: 4
[2025-12-04 03:45:55] Checking for CVMFS
[2025-12-04 03:45:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-04 03:45:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-04 03:45:55] Running cvmfs_config stat atlas.cern.ch
[2025-12-04 03:45:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-04 03:45:56] 2.9.2.0 3041 1464 74288 153620 2 68 31615277 36864000 0 130560 0 611900 99.983 52881 23702 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-04 03:45:56] CVMFS is ok
[2025-12-04 03:45:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-04 03:45:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-04 03:45:56] Further information can be found at the LHC@home message board.
[2025-12-04 03:45:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-04 03:45:56] Checking for apptainer binary...
[2025-12-04 03:45:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-04 03:45:56] Running /usr/bin/apptainer --version
[2025-12-04 03:45:56] apptainer version 1.4.1-1.1
[2025-12-04 03:45:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-04 03:45:56] cosA131b
[2025-12-04 03:45:56] apptainer works
[2025-12-04 03:45:56] Set ATHENA_PROC_NUMBER=4
[2025-12-04 03:45:56] Set ATHENA_CORE_NUMBER=4
[2025-12-04 03:45:56] Starting ATLAS job with PandaID=6904974447
[2025-12-04 03:45:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-04 09:35:38]  *** The last 200 lines of the pilot log: ***
[2025-12-04 09:35:38] 2025-12-04 08:34:51,790 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-04 09:35:38] 2025-12-04 08:34:51,980 | INFO     | time since job start (20927s) is within the limit (172800.0s)
[2025-12-04 09:35:38] 2025-12-04 08:34:52,452 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-04 09:35:38] 2025-12-04 08:34:52,453 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3377.9495625
[2025-12-04 09:35:38] 2025-12-04 08:34:52,455 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6904974447/memory_monitor_summary.json (trf name=prmon)
[2025-12-04 09:35:38] 2025-12-04 08:34:52,455 | INFO     | extracted standard info from prmon json
[2025-12-04 09:35:38] 2025-12-04 08:34:52,455 | INFO     | extracted standard memory fields from prmon json
[2025-12-04 09:35:38] 2025-12-04 08:34:52,455 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-04 09:35:38] 2025-12-04 08:34:52,458 | INFO     | fitting pss+swap vs Time
[2025-12-04 09:35:38] 2025-12-04 08:34:52,458 | INFO     | sum of square deviations: 12512874612.0
[2025-12-04 09:35:38] 2025-12-04 08:34:52,459 | INFO     | sum of deviations: 204371218727.99997
[2025-12-04 09:35:38] 2025-12-04 08:34:52,459 | INFO     | mean x: 1764826821.0
[2025-12-04 09:35:38] 2025-12-04 08:34:52,459 | INFO     | mean y: 2773216.396501458
[2025-12-04 09:35:38] 2025-12-04 08:34:52,459 | INFO     | intersect: -28821922901.451233
[2025-12-04 09:35:38] 2025-12-04 08:34:52,459 | INFO     | chi2: 5.112088326835752
[2025-12-04 09:35:38] 2025-12-04 08:34:52,460 | INFO     | sum of square deviations: 11973599384.5
[2025-12-04 09:35:38] 2025-12-04 08:34:52,461 | INFO     | sum of deviations: 268230761081.5
[2025-12-04 09:35:38] 2025-12-04 08:34:52,461 | INFO     | mean x: 1764826668.5
[2025-12-04 09:35:38] 2025-12-04 08:34:52,461 | INFO     | mean y: 2791167.4526627217
[2025-12-04 09:35:38] 2025-12-04 08:34:52,461 | INFO     | intersect: -39532588735.225685
[2025-12-04 09:35:38] 2025-12-04 08:34:52,461 | INFO     | chi2: 3.2660444504685735
[2025-12-04 09:35:38] 2025-12-04 08:34:52,461 | INFO     | current chi2=3.2660444504685735 (change=36.111345468669384 %)
[2025-12-04 09:35:38] 2025-12-04 08:34:52,461 | INFO     | sum of square deviations: 11450045382.0
[2025-12-04 09:35:38] 2025-12-04 08:34:52,462 | INFO     | sum of deviations: 261477290255.0
[2025-12-04 09:35:38] 2025-12-04 08:34:52,462 | INFO     | mean x: 1764826516.0
[2025-12-04 09:35:38] 2025-12-04 08:34:52,462 | INFO     | mean y: 2789200.792792793
[2025-12-04 09:35:38] 2025-12-04 08:34:52,462 | INFO     | intersect: -40299413958.96866
[2025-12-04 09:35:38] 2025-12-04 08:34:52,462 | INFO     | chi2: 3.2651839536339957
[2025-12-04 09:35:38] 2025-12-04 08:34:52,462 | INFO     | current chi2=3.2651839536339957 (change=0.02634675821556348 %)
[2025-12-04 09:35:38] 2025-12-04 08:34:52,462 | INFO     | right removable region: 332
[2025-12-04 09:35:38] 2025-12-04 08:34:52,463 | INFO     | sum of square deviations: 11973599384.5
[2025-12-04 09:35:38] 2025-12-04 08:34:52,464 | INFO     | sum of deviations: 99846637533.5
[2025-12-04 09:35:38] 2025-12-04 08:34:52,464 | INFO     | mean x: 1764826973.5
[2025-12-04 09:35:38] 2025-12-04 08:34:52,464 | INFO     | mean y: 2802733.1272189347
[2025-12-04 09:35:38] 2025-12-04 08:34:52,464 | INFO     | intersect: -14713911387.14871
[2025-12-04 09:35:38] 2025-12-04 08:34:52,464 | INFO     | chi2: 2.4366342255251774
[2025-12-04 09:35:38] 2025-12-04 08:34:52,464 | INFO     | current chi2=2.4366342255251774 (change=52.33583479506525 %)
[2025-12-04 09:35:38] 2025-12-04 08:34:52,464 | INFO     | sum of square deviations: 11450045382.0
[2025-12-04 09:35:38] 2025-12-04 08:34:52,465 | INFO     | sum of deviations: 62501145279.0
[2025-12-04 09:35:38] 2025-12-04 08:34:52,465 | INFO     | mean x: 1764827126.0
[2025-12-04 09:35:38] 2025-12-04 08:34:52,465 | INFO     | mean y: 2813543.4564564563
[2025-12-04 09:35:38] 2025-12-04 08:34:52,465 | INFO     | intersect: -9630660640.65888
[2025-12-04 09:35:38] 2025-12-04 08:34:52,466 | INFO     | chi2: 1.9416560720229699
[2025-12-04 09:35:38] 2025-12-04 08:34:52,466 | INFO     | current chi2=1.9416560720229699 (change=20.314011365227497 %)
[2025-12-04 09:35:38] 2025-12-04 08:34:52,466 | INFO     | left removable region: 20
[2025-12-04 09:35:38] 2025-12-04 08:34:52,466 | INFO     | sum of square deviations: 9417545878.0
[2025-12-04 09:35:38] 2025-12-04 08:34:52,467 | INFO     | sum of deviations: 104814991672.00002
[2025-12-04 09:35:38] 2025-12-04 08:34:52,467 | INFO     | mean x: 1764827095.5
[2025-12-04 09:35:38] 2025-12-04 08:34:52,467 | INFO     | mean y: 2836394.2884615385
[2025-12-04 09:35:38] 2025-12-04 08:34:52,467 | INFO     | intersect: -19639259297.48604
[2025-12-04 09:35:38] 2025-12-04 08:34:52,467 | INFO     | chi2: 0.04744262242636353
[2025-12-04 09:35:38] 2025-12-04 08:34:52,467 | INFO     | current memory leak: 11.13 B/s (using 312 data points, chi2=0.05)
[2025-12-04 09:35:38] 2025-12-04 08:34:52,467 | INFO     | could have reported an average CPU frequency of 3778 MHz (15 samples)
[2025-12-04 09:35:38] 2025-12-04 08:34:52,467 | INFO     | ..............................
[2025-12-04 09:35:38] 2025-12-04 08:34:52,467 | INFO     | . Timing measurements:
[2025-12-04 09:35:38] 2025-12-04 08:34:52,467 | INFO     | . get job = 0 s
[2025-12-04 09:35:38] 2025-12-04 08:34:52,467 | INFO     | . initial setup = 1 s
[2025-12-04 09:35:38] 2025-12-04 08:34:52,467 | INFO     | . payload setup = 7 s
[2025-12-04 09:35:38] 2025-12-04 08:34:52,468 | INFO     | . stage-in = 0 s
[2025-12-04 09:35:38] 2025-12-04 08:34:52,468 | INFO     | . payload execution = 20896 s
[2025-12-04 09:35:38] 2025-12-04 08:34:52,468 | INFO     | . stage-out = 1 s
[2025-12-04 09:35:38] 2025-12-04 08:34:52,468 | INFO     | . log creation = 0 s
[2025-12-04 09:35:38] 2025-12-04 08:34:52,468 | INFO     | ..............................
[2025-12-04 09:35:38] 2025-12-04 08:34:52,534 | INFO     | 
[2025-12-04 09:35:38] 2025-12-04 08:34:52,534 | INFO     | job summary report
[2025-12-04 09:35:38] 2025-12-04 08:34:52,534 | INFO     | --------------------------------------------------
[2025-12-04 09:35:38] 2025-12-04 08:34:52,534 | INFO     | PanDA job id: 6904974447
[2025-12-04 09:35:38] 2025-12-04 08:34:52,534 | INFO     | task id: 47538113
[2025-12-04 09:35:38] 2025-12-04 08:34:52,534 | INFO     | errors: (none)
[2025-12-04 09:35:38] 2025-12-04 08:34:52,534 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-04 09:35:38] 2025-12-04 08:34:52,534 | INFO     | pilot state: finished 
[2025-12-04 09:35:38] 2025-12-04 08:34:52,534 | INFO     | transexitcode: 0
[2025-12-04 09:35:38] 2025-12-04 08:34:52,534 | INFO     | exeerrorcode: 0
[2025-12-04 09:35:38] 2025-12-04 08:34:52,534 | INFO     | exeerrordiag: 
[2025-12-04 09:35:38] 2025-12-04 08:34:52,534 | INFO     | exitcode: 0
[2025-12-04 09:35:38] 2025-12-04 08:34:52,534 | INFO     | exitmsg: OK
[2025-12-04 09:35:38] 2025-12-04 08:34:52,534 | INFO     | cpuconsumptiontime: 81615 s
[2025-12-04 09:35:38] 2025-12-04 08:34:52,534 | INFO     | nevents: 1000
[2025-12-04 09:35:38] 2025-12-04 08:34:52,534 | INFO     | neventsw: 0
[2025-12-04 09:35:38] 2025-12-04 08:34:52,535 | INFO     | pid: 232727
[2025-12-04 09:35:38] 2025-12-04 08:34:52,535 | INFO     | pgrp: 232727
[2025-12-04 09:35:38] 2025-12-04 08:34:52,535 | INFO     | corecount: 4
[2025-12-04 09:35:38] 2025-12-04 08:34:52,535 | INFO     | event service: False
[2025-12-04 09:35:38] 2025-12-04 08:34:52,535 | INFO     | sizes: {0: 2284397, 4: 2284659, 11: 2284687, 20907: 2338741, 20910: 2347797, 20914: 2347987}
[2025-12-04 09:35:38] 2025-12-04 08:34:52,535 | INFO     | --------------------------------------------------
[2025-12-04 09:35:38] 2025-12-04 08:34:52,535 | INFO     | 
[2025-12-04 09:35:38] 2025-12-04 08:34:52,535 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-04 09:35:38] 2025-12-04 08:34:52,556 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-04 09:35:38] 2025-12-04 08:34:52,556 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-04 09:35:38] 2025-12-04 08:34:52,556 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-04 09:35:38] 2025-12-04 08:34:52,556 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-04 09:35:38] 2025-12-04 08:34:52,556 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-04 09:35:38] 2025-12-04 08:34:52,556 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-04 09:35:38] 2025-12-04 08:34:52,556 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-04 09:35:38] 2025-12-04 08:34:52,557 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-04 09:35:38] 2025-12-04 08:34:52,557 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-04 09:35:38] 2025-12-04 08:34:52,557 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-04 09:35:38] 2025-12-04 08:34:52,557 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-04 09:35:38] 2025-12-04 08:34:52,557 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-04 09:35:38] 2025-12-04 08:34:52,557 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-04 09:35:38] 2025-12-04 08:34:52,557 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-04 09:35:38] 2025-12-04 08:34:52,557 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-04 09:35:38] 2025-12-04 08:34:52,557 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-04 09:35:38] 2025-12-04 08:34:52,557 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-04 09:35:38] 2025-12-04 08:34:52,557 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-04 09:35:38] 2025-12-04 08:34:52,557 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-04 09:35:38] 2025-12-04 08:34:52,557 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-04 09:35:38] 2025-12-04 08:34:52,557 | INFO     | job 6904974447 has completed (purged errors)
[2025-12-04 09:35:38] 2025-12-04 08:34:52,557 | INFO     | overall cleanup function is called
[2025-12-04 09:35:38] 2025-12-04 08:34:53,567 | INFO     | --- collectZombieJob: --- 10, [232727]
[2025-12-04 09:35:38] 2025-12-04 08:34:53,567 | INFO     | zombie collector waiting for pid 232727
[2025-12-04 09:35:38] 2025-12-04 08:34:53,567 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-04 09:35:38] 2025-12-04 08:34:53,567 | INFO     | collected zombie processes
[2025-12-04 09:35:38] 2025-12-04 08:34:53,567 | INFO     | will attempt to kill all subprocesses of pid=232727
[2025-12-04 09:35:38] 2025-12-04 08:34:53,611 | INFO     | process IDs to be killed: [232727] (in reverse order)
[2025-12-04 09:35:38] 2025-12-04 08:34:53,644 | WARNING  | found no corresponding commands to process id(s)
[2025-12-04 09:35:38] 2025-12-04 08:34:53,645 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-04 09:35:38] 2025-12-04 08:34:53,647 | INFO     | did not find any defunct processes belonging to 232727
[2025-12-04 09:35:38] 2025-12-04 08:34:53,648 | INFO     | did not find any defunct processes belonging to 232727
[2025-12-04 09:35:38] 2025-12-04 08:34:53,649 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-04 09:35:38] 2025-12-04 08:34:53,649 | INFO     | ready for new job
[2025-12-04 09:35:38] 2025-12-04 08:34:53,649 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-04 09:35:38] 2025-12-04 08:34:53,650 | INFO     | ***************************************
[2025-12-04 09:35:38] 2025-12-04 08:34:53,650 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-04 09:35:38] 2025-12-04 08:34:53,650 | INFO     | ***************************************
[2025-12-04 09:35:38] 2025-12-04 08:34:53,650 | INFO     | 
[2025-12-04 09:35:38] 2025-12-04 08:34:53,651 | INFO     | architecture information:
[2025-12-04 09:35:38] 2025-12-04 08:34:53,651 | INFO     | executing command: cat /etc/os-release
[2025-12-04 09:35:38] 2025-12-04 08:34:53,665 | INFO     | cat /etc/os-release:
[2025-12-04 09:35:38] NAME="CentOS Linux"
[2025-12-04 09:35:38] VERSION="7 (Core)"
[2025-12-04 09:35:38] ID="centos"
[2025-12-04 09:35:38] ID_LIKE="rhel fedora"
[2025-12-04 09:35:38] VERSION_ID="7"
[2025-12-04 09:35:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-04 09:35:38] ANSI_COLOR="0;31"
[2025-12-04 09:35:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-04 09:35:38] HOME_URL="https://www.centos.org/"
[2025-12-04 09:35:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-04 09:35:38] 
[2025-12-04 09:35:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-04 09:35:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-04 09:35:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-04 09:35:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-04 09:35:38] 
[2025-12-04 09:35:38] 2025-12-04 08:34:53,666 | INFO     | ***************************************
[2025-12-04 09:35:38] 2025-12-04 08:34:54,169 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-04 09:35:38] 2025-12-04 08:34:54,187 | INFO     | sufficient remaining disk space (322210627584 B)
[2025-12-04 09:35:38] 2025-12-04 08:34:54,187 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-04 09:35:38] 2025-12-04 08:34:54,188 | INFO     | current server update state: UPDATING_FINAL
[2025-12-04 09:35:38] 2025-12-04 08:34:54,188 | INFO     | update_server=False
[2025-12-04 09:35:38] 2025-12-04 08:34:54,188 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-04 09:35:38] 2025-12-04 08:34:54,188 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-04 09:35:38] 2025-12-04 08:34:54,188 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-04 09:35:38] 2025-12-04 08:34:54,294 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-04 09:35:38] 2025-12-04 08:34:54,294 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-04 09:35:38] 2025-12-04 08:34:54,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-04 09:35:38] 2025-12-04 08:34:54,295 | INFO     | will abort loop
[2025-12-04 09:35:38] 2025-12-04 08:34:54,711 | INFO     | all job control threads have been joined
[2025-12-04 09:35:38] 2025-12-04 08:34:54,812 | INFO     | all data control threads have been joined
[2025-12-04 09:35:38] 2025-12-04 08:34:55,193 | INFO     | [job] retrieve thread has finished
[2025-12-04 09:35:38] 2025-12-04 08:34:55,194 | INFO     | [job] queue monitor thread has finished
[2025-12-04 09:35:38] 2025-12-04 08:34:55,220 | INFO     | all payload control threads have been joined
[2025-12-04 09:35:38] 2025-12-04 08:34:55,300 | INFO     | [job] job monitor thread has finished
[2025-12-04 09:35:38] 2025-12-04 08:34:55,444 | INFO     | [payload] failed_post thread has finished
[2025-12-04 09:35:38] 2025-12-04 08:34:55,620 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-04 09:35:38] 2025-12-04 08:34:55,717 | INFO     | [job] control thread has finished
[2025-12-04 09:35:38] 2025-12-04 08:34:55,777 | INFO     | [data] copytool_in thread has finished
[2025-12-04 09:35:38] 2025-12-04 08:34:55,796 | INFO     | [payload] validate_post thread has finished
[2025-12-04 09:35:38] 2025-12-04 08:34:55,818 | INFO     | [data] control thread has finished
[2025-12-04 09:35:38] 2025-12-04 08:34:55,990 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-04 09:35:38] 2025-12-04 08:34:56,226 | INFO     | [payload] control thread has finished
[2025-12-04 09:35:38] 2025-12-04 08:34:56,353 | INFO     | [payload] execute_payloads thread has finished
[2025-12-04 09:35:38] 2025-12-04 08:34:56,400 | INFO     | [job] validate thread has finished
[2025-12-04 09:35:38] 2025-12-04 08:34:56,596 | INFO     | [payload] validate_pre thread has finished
[2025-12-04 09:35:38] 2025-12-04 08:34:56,683 | INFO     | [job] create_data_payload thread has finished
[2025-12-04 09:35:38] 2025-12-04 08:34:57,627 | INFO     | [data] copytool_out thread has finished
[2025-12-04 09:35:38] 2025-12-04 08:34:58,195 | INFO     | [data] queue_monitor thread has finished
[2025-12-04 09:35:38] 2025-12-04 08:35:25,116 | INFO     | PID=225496 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-04 09:35:38] 2025-12-04 08:35:25,116 | INFO     | found 0 job(s) in 20 queues
[2025-12-04 09:35:38] 2025-12-04 08:35:25,116 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-04 09:35:38] 2025-12-04 08:35:25,116 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-04 09:35:38] 2025-12-04 08:35:31,808 | INFO     | [monitor] cgroup control has ended
[2025-12-04 09:35:38] 2025-12-04 08:35:32,814 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140265887110976)>', '<ExcThread(monitor, started 140265100666624)>']
[2025-12-04 09:35:38] 2025-12-04 08:35:33,156 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-04 09:35:38] 2025-12-04 08:35:33,156 | INFO     | [monitor] control thread has ended
[2025-12-04 09:35:38] 2025-12-04 08:35:37,840 | INFO     | all workflow threads have been joined
[2025-12-04 09:35:38] 2025-12-04 08:35:37,840 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-04 09:35:38] 2025-12-04 08:35:37,841 | INFO     | traces error code: 0
[2025-12-04 09:35:38] 2025-12-04 08:35:37,841 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-04 09:35:38] 2025-12-04 08:35:37,921 [wrapper] ==== pilot stdout END ====
[2025-12-04 09:35:38] 2025-12-04 08:35:37,926 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-04 09:35:38] 2025-12-04 08:35:37,930 [wrapper] pilotpid: 225496
[2025-12-04 09:35:38] 2025-12-04 08:35:37,934 [wrapper] Pilot exit status: 0
[2025-12-04 09:35:38] 2025-12-04 08:35:37,947 [wrapper] pandaids: 6904974447
[2025-12-04 09:35:38] 2025-12-04 08:35:37,971 [wrapper] cleanup supervisor_pilot  274397 225497
[2025-12-04 09:35:38] 2025-12-04 08:35:37,975 [wrapper] Test setup, not cleaning
[2025-12-04 09:35:38] 2025-12-04 08:35:37,979 [wrapper] apfmon messages muted
[2025-12-04 09:35:38] 2025-12-04 08:35:37,982 [wrapper] ==== wrapper stdout END ====
[2025-12-04 09:35:38] 2025-12-04 08:35:37,986 [wrapper] ==== wrapper stderr END ====
[2025-12-04 09:35:38]  *** Error codes and diagnostics ***
[2025-12-04 09:35:38]     "exeErrorCode": 0,
[2025-12-04 09:35:38]     "exeErrorDiag": "",
[2025-12-04 09:35:38]     "pilotErrorCode": 0,
[2025-12-04 09:35:38]     "pilotErrorDiag": "",
[2025-12-04 09:35:38]  *** Listing of results directory ***
[2025-12-04 09:35:38] total 1061164
[2025-12-04 09:35:38] -rw-r--r-- 1 boinc boinc    576529 Nov 30 01:16 pilot3.tar.gz
[2025-12-04 09:35:38] -rwx------ 1 boinc boinc     36292 Nov 30 01:18 runpilot2-wrapper.sh
[2025-12-04 09:35:38] -rw-r--r-- 1 boinc boinc      5112 Nov 30 01:23 queuedata.json
[2025-12-04 09:35:38] -rw-r--r-- 1 boinc boinc       100 Dec  4 03:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-04 09:35:38] -rwxr-xr-x 1 boinc boinc      7986 Dec  4 03:45 run_atlas
[2025-12-04 09:35:38] -rw-r--r-- 1 boinc boinc       105 Dec  4 03:45 job.xml
[2025-12-04 09:35:38] -rw-r--r-- 2 boinc boinc 377345048 Dec  4 03:45 EVNT.47528871._000023.pool.root.1
[2025-12-04 09:35:38] -rw-r--r-- 2 boinc boinc    590138 Dec  4 03:45 input.tar.gz
[2025-12-04 09:35:38] -rw-r--r-- 2 boinc boinc     15847 Dec  4 03:45 start_atlas.sh
[2025-12-04 09:35:38] drwxrwx--x 2 boinc boinc      4096 Dec  4 03:45 shared
[2025-12-04 09:35:38] -rw-r--r-- 1 boinc boinc         0 Dec  4 03:45 boinc_setup_complete
[2025-12-04 09:35:38] -rw-r--r-- 1 boinc boinc      6380 Dec  4 03:45 init_data.xml
[2025-12-04 09:35:38] -rw-r--r-- 1 boinc boinc         0 Dec  4 03:45 boinc_lockfile
[2025-12-04 09:35:38] -rw-r--r-- 1 boinc boinc      2876 Dec  4 03:45 pandaJob.out
[2025-12-04 09:35:38] -rw------- 1 boinc boinc    985959 Dec  4 03:46 agis_schedconf.cvmfs.json
[2025-12-04 09:35:38] drwx------ 5 boinc boinc      4096 Dec  4 03:46 pilot3
[2025-12-04 09:35:38] -rw-r--r-- 1 boinc boinc       532 Dec  4 09:31 boinc_task_state.xml
[2025-12-04 09:35:38] -rw------- 1 boinc boinc 696828237 Dec  4 09:34 HITS.47538113._001911.pool.root.1
[2025-12-04 09:35:38] -rw------- 1 boinc boinc      1025 Dec  4 09:34 memory_monitor_summary.json
[2025-12-04 09:35:38] -rw------- 1 boinc boinc   1516240 Dec  4 09:34 agis_ddmendpoints.agis.ALL.json
[2025-12-04 09:35:38] -rw------- 1 boinc boinc   1299332 Dec  4 09:34 log.47538113._001911.job.log.tgz.1
[2025-12-04 09:35:38] -rw------- 1 boinc boinc     28038 Dec  4 09:34 heartbeat.json
[2025-12-04 09:35:38] -rw-r--r-- 1 boinc boinc      8192 Dec  4 09:35 boinc_mmap_file
[2025-12-04 09:35:38] -rw-r--r-- 1 boinc boinc        28 Dec  4 09:35 wrapper_checkpoint.txt
[2025-12-04 09:35:38] -rw------- 1 boinc boinc        95 Dec  4 09:35 pilot_heartbeat.json
[2025-12-04 09:35:38] -rw------- 1 boinc boinc      4937 Dec  4 09:35 pilotlog.txt
[2025-12-04 09:35:38] -rw------- 1 boinc boinc   2957140 Dec  4 09:35 log.47538113._001911.job.log.1
[2025-12-04 09:35:38] -rw------- 1 boinc boinc       353 Dec  4 09:35 output.list
[2025-12-04 09:35:38] -rw-r--r-- 1 boinc boinc       620 Dec  4 09:35 runtime_log
[2025-12-04 09:35:38] -rw------- 1 boinc boinc   4290560 Dec  4 09:35 result.tar.gz
[2025-12-04 09:35:38] -rw-r--r-- 1 boinc boinc      8908 Dec  4 09:35 runtime_log.err
[2025-12-04 09:35:38] -rw------- 1 boinc boinc       667 Dec  4 09:35 Lg7MDmLKkj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmM4LKDmhb0gMn.diag
[2025-12-04 09:35:38] -rw-r--r-- 1 boinc boinc     21212 Dec  4 09:35 stderr.txt
[2025-12-04 09:35:38] HITS file was successfully produced:
[2025-12-04 09:35:38] -rw------- 1 boinc boinc 696828237 Dec  4 09:34 shared/HITS.pool.root.1
[2025-12-04 09:35:38]  *** Contents of shared directory: ***
[2025-12-04 09:35:38] total 1053800
[2025-12-04 09:35:38] -rw-r--r-- 2 boinc boinc 377345048 Dec  4 03:45 ATLAS.root_0
[2025-12-04 09:35:38] -rw-r--r-- 2 boinc boinc    590138 Dec  4 03:45 input.tar.gz
[2025-12-04 09:35:38] -rw-r--r-- 2 boinc boinc     15847 Dec  4 03:45 start_atlas.sh
[2025-12-04 09:35:38] -rw------- 1 boinc boinc 696828237 Dec  4 09:34 HITS.pool.root.1
[2025-12-04 09:35:38] -rw------- 1 boinc boinc   4290560 Dec  4 09:35 result.tar.gz
09:35:39 (221711): run_atlas exited; CPU time 81580.842358
09:35:39 (221711): called boinc_finish(0)

</stderr_txt>
]]>

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