Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:50:08 (410867): wrapper (7.7.26015): starting
12:50:08 (410867): wrapper: running run_atlas (--nthreads 4)
[2025-12-04 12:50:08] Arguments: --nthreads 4
[2025-12-04 12:50:08] Threads: 4
[2025-12-04 12:50:08] Checking for CVMFS
[2025-12-04 12:50:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-04 12:50:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-04 12:50:08] Running cvmfs_config stat atlas.cern.ch
[2025-12-04 12:50:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-04 12:50:09] 2.9.2.0 1682378 19918 103004 153635 0 81 29370669 36864001 0 130560 0 8418406 99.982 702676 1093 http://cvmfs-egi.gridpp.rl.ac.uk:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-04 12:50:09] CVMFS is ok
[2025-12-04 12:50:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-04 12:50:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-04 12:50:09] Further information can be found at the LHC@home message board.
[2025-12-04 12:50:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-04 12:50:09] Checking for apptainer binary...
[2025-12-04 12:50:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-04 12:50:09] Running /usr/bin/apptainer --version
[2025-12-04 12:50:09] apptainer version 1.4.1-1.1
[2025-12-04 12:50:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-04 12:50:09] thA315b
[2025-12-04 12:50:09] apptainer works
[2025-12-04 12:50:09] Set ATHENA_PROC_NUMBER=4
[2025-12-04 12:50:09] Set ATHENA_CORE_NUMBER=4
[2025-12-04 12:50:09] Starting ATLAS job with PandaID=6905332466
[2025-12-04 12:50:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-04 17:50:44]  *** The last 200 lines of the pilot log: ***
[2025-12-04 17:50:44] 2025-12-04 16:49:46,893 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-04 17:50:44] 2025-12-04 16:49:46,893 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-04 17:50:44] 2025-12-04 16:49:46,963 | INFO     | all data control threads have been joined
[2025-12-04 17:50:44] 2025-12-04 16:49:47,145 | INFO     | all payload control threads have been joined
[2025-12-04 17:50:44] 2025-12-04 16:49:47,325 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-04 17:50:44] 2025-12-04 16:49:47,325 | INFO     | aborting loop
[2025-12-04 17:50:44] 2025-12-04 16:49:47,511 | INFO     | all job control threads have been joined
[2025-12-04 17:50:44] 2025-12-04 16:49:47,685 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-04 17:50:44] 2025-12-04 16:49:47,898 | INFO     | [job] retrieve thread has finished
[2025-12-04 17:50:44] 2025-12-04 16:49:47,899 | INFO     | [job] queue monitor thread has finished
[2025-12-04 17:50:44] 2025-12-04 16:49:47,969 | INFO     | [data] control thread has finished
[2025-12-04 17:50:44] 2025-12-04 16:49:48,150 | INFO     | [payload] control thread has finished
[2025-12-04 17:50:44] 2025-12-04 16:49:48,331 | INFO     | [job] job monitor thread has finished
[2025-12-04 17:50:44] 2025-12-04 16:49:48,402 | INFO     | [payload] execute_payloads thread has finished
[2025-12-04 17:50:44] 2025-12-04 16:49:48,516 | INFO     | [job] control thread has finished
[2025-12-04 17:50:44] 2025-12-04 16:49:48,686 | INFO     | [payload] failed_post thread has finished
[2025-12-04 17:50:44] 2025-12-04 16:49:49,141 | INFO     | [data] copytool_in thread has finished
[2025-12-04 17:50:44] 2025-12-04 16:49:49,233 | INFO     | [payload] validate_post thread has finished
[2025-12-04 17:50:44] 2025-12-04 16:49:49,323 | INFO     | [job] validate thread has finished
[2025-12-04 17:50:44] 2025-12-04 16:49:49,327 | INFO     | [payload] validate_pre thread has finished
[2025-12-04 17:50:44] 2025-12-04 16:49:49,328 | INFO     | [job] create_data_payload thread has finished
[2025-12-04 17:50:44] 2025-12-04 16:49:49,692 | INFO     | [data] copytool_out thread has finished
[2025-12-04 17:50:44] 2025-12-04 16:49:50,898 | INFO     | [data] queue_monitor thread has finished
[2025-12-04 17:50:44] 2025-12-04 16:49:57,924 | INFO     | job.realtimelogging is not enabled
[2025-12-04 17:50:44] 2025-12-04 16:49:58,930 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-04 17:50:44] 2025-12-04 16:50:14,283 [wrapper] supervise_pilot (15 min periods counter: 21)
[2025-12-04 17:50:44] 2025-12-04 16:50:16,762 | INFO     | PID=414665 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-04 17:50:44] 2025-12-04 16:50:16,762 | INFO     | found 0 job(s) in 20 queues
[2025-12-04 17:50:44] 2025-12-04 16:50:16,762 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-04 17:50:44] 2025-12-04 16:50:16,762 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-04 17:50:44] 2025-12-04 16:50:38,098 | INFO     | [monitor] cgroup control has ended
[2025-12-04 17:50:44] 2025-12-04 16:50:39,104 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140286322857792)>', '<ExcThread(monitor, started 140285174609664)>']
[2025-12-04 17:50:44] 2025-12-04 16:50:39,879 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-04 17:50:44] 2025-12-04 16:50:39,879 | INFO     | [monitor] control thread has ended
[2025-12-04 17:50:44] 2025-12-04 16:50:44,129 | INFO     | all workflow threads have been joined
[2025-12-04 17:50:44] 2025-12-04 16:50:44,130 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-04 17:50:44] 2025-12-04 16:50:44,130 | INFO     | traces error code: 0
[2025-12-04 17:50:44] 2025-12-04 16:50:44,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-04 17:50:44] 2025-12-04 16:50:44,185 [wrapper] ==== pilot stdout END ====
[2025-12-04 17:50:44] 2025-12-04 16:50:44,188 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-04 17:50:44] 2025-12-04 16:50:44,191 [wrapper] pilotpid: 414665
[2025-12-04 17:50:44] 2025-12-04 16:50:44,194 [wrapper] Pilot exit status: 0
[2025-12-04 17:50:44] 2025-12-04 16:50:44,201 [wrapper] pandaids: 6905332466
[2025-12-04 17:50:44] 2025-12-04 16:50:44,221 [wrapper] cleanup supervisor_pilot  462349 414666
[2025-12-04 17:50:44] 2025-12-04 16:50:44,224 [wrapper] Test setup, not cleaning
[2025-12-04 17:50:44] 2025-12-04 16:50:44,227 [wrapper] apfmon messages muted
[2025-12-04 17:50:44] 2025-12-04 16:50:44,229 [wrapper] ==== wrapper stdout END ====
[2025-12-04 17:50:44] 2025-12-04 16:50:44,232 [wrapper] ==== wrapper stderr END ====
[2025-12-04 17:50:44]  *** Error codes and diagnostics ***
[2025-12-04 17:50:44]     "exeErrorCode": 0,
[2025-12-04 17:50:44]     "exeErrorDiag": "",
[2025-12-04 17:50:44]     "pilotErrorCode": 0,
[2025-12-04 17:50:44]     "pilotErrorDiag": "",
[2025-12-04 17:50:44]  *** Listing of results directory ***
[2025-12-04 17:50:44] total 1047988
[2025-12-04 17:50:44] -rw-r--r-- 1 boinc boinc    576529 Nov 30 01:16 pilot3.tar.gz
[2025-12-04 17:50:44] -rwx------ 1 boinc boinc     36292 Nov 30 01:18 runpilot2-wrapper.sh
[2025-12-04 17:50:44] -rw-r--r-- 1 boinc boinc      5112 Nov 30 01:21 queuedata.json
[2025-12-04 17:50:44] -rw-r--r-- 1 boinc boinc       100 Dec  4 12:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-04 17:50:44] -rwxr-xr-x 1 boinc boinc      7986 Dec  4 12:50 run_atlas
[2025-12-04 17:50:44] -rw-r--r-- 1 boinc boinc       105 Dec  4 12:50 job.xml
[2025-12-04 17:50:44] -rw-r--r-- 2 boinc boinc 373942275 Dec  4 12:50 EVNT.47530720._000056.pool.root.1
[2025-12-04 17:50:44] -rw-r--r-- 2 boinc boinc    590124 Dec  4 12:50 input.tar.gz
[2025-12-04 17:50:44] -rw-r--r-- 2 boinc boinc     15847 Dec  4 12:50 start_atlas.sh
[2025-12-04 17:50:44] drwxrwx--x 2 boinc boinc      4096 Dec  4 12:50 shared
[2025-12-04 17:50:44] -rw-r--r-- 1 boinc boinc         0 Dec  4 12:50 boinc_setup_complete
[2025-12-04 17:50:44] -rw-r--r-- 1 boinc boinc      6444 Dec  4 12:50 init_data.xml
[2025-12-04 17:50:44] -rw-r--r-- 1 boinc boinc         0 Dec  4 12:50 boinc_lockfile
[2025-12-04 17:50:44] -rw-r--r-- 1 boinc boinc      2877 Dec  4 12:50 pandaJob.out
[2025-12-04 17:50:44] -rw------- 1 boinc boinc    985572 Dec  4 12:50 agis_schedconf.cvmfs.json
[2025-12-04 17:50:44] drwx------ 5 boinc boinc      4096 Dec  4 12:50 pilot3
[2025-12-04 17:50:44] -rw-r--r-- 1 boinc boinc       531 Dec  4 17:46 boinc_task_state.xml
[2025-12-04 17:50:44] -rw------- 1 boinc boinc 687661526 Dec  4 17:49 HITS.47530725._001957.pool.root.1
[2025-12-04 17:50:44] -rw------- 1 boinc boinc      1033 Dec  4 17:49 memory_monitor_summary.json
[2025-12-04 17:50:44] -rw------- 1 boinc boinc   1516240 Dec  4 17:49 agis_ddmendpoints.agis.ALL.json
[2025-12-04 17:50:44] -rw------- 1 boinc boinc   1259598 Dec  4 17:49 log.47530725._001957.job.log.tgz.1
[2025-12-04 17:50:44] -rw------- 1 boinc boinc     28026 Dec  4 17:49 heartbeat.json
[2025-12-04 17:50:44] -rw------- 1 boinc boinc        95 Dec  4 17:50 pilot_heartbeat.json
[2025-12-04 17:50:44] -rw-r--r-- 1 boinc boinc      8192 Dec  4 17:50 boinc_mmap_file
[2025-12-04 17:50:44] -rw-r--r-- 1 boinc boinc        28 Dec  4 17:50 wrapper_checkpoint.txt
[2025-12-04 17:50:44] -rw------- 1 boinc boinc      4823 Dec  4 17:50 pilotlog.txt
[2025-12-04 17:50:44] -rw------- 1 boinc boinc   2543252 Dec  4 17:50 log.47530725._001957.job.log.1
[2025-12-04 17:50:44] -rw------- 1 boinc boinc       353 Dec  4 17:50 output.list
[2025-12-04 17:50:44] -rw-r--r-- 1 boinc boinc       620 Dec  4 17:50 runtime_log
[2025-12-04 17:50:44] -rw------- 1 boinc boinc   3840000 Dec  4 17:50 result.tar.gz
[2025-12-04 17:50:44] -rw-r--r-- 1 boinc boinc      8903 Dec  4 17:50 runtime_log.err
[2025-12-04 17:50:44] -rw------- 1 boinc boinc       671 Dec  4 17:50 FL3KDmzJkj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1JPKDm9arGNm.diag
[2025-12-04 17:50:44] -rw-r--r-- 1 boinc boinc      7389 Dec  4 17:50 stderr.txt
[2025-12-04 17:50:44] HITS file was successfully produced:
[2025-12-04 17:50:44] -rw------- 1 boinc boinc 687661526 Dec  4 17:49 shared/HITS.pool.root.1
[2025-12-04 17:50:44]  *** Contents of shared directory: ***
[2025-12-04 17:50:44] total 1041084
[2025-12-04 17:50:44] -rw-r--r-- 2 boinc boinc 373942275 Dec  4 12:50 ATLAS.root_0
[2025-12-04 17:50:44] -rw-r--r-- 2 boinc boinc    590124 Dec  4 12:50 input.tar.gz
[2025-12-04 17:50:44] -rw-r--r-- 2 boinc boinc     15847 Dec  4 12:50 start_atlas.sh
[2025-12-04 17:50:44] -rw------- 1 boinc boinc 687661526 Dec  4 17:49 HITS.pool.root.1
[2025-12-04 17:50:44] -rw------- 1 boinc boinc   3840000 Dec  4 17:50 result.tar.gz
17:50:45 (410867): run_atlas exited; CPU time 69915.201546
17:50:45 (410867): called boinc_finish(0)

</stderr_txt>
]]>

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