Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:32:12 (1374502): wrapper (7.7.26015): starting
02:32:12 (1374502): wrapper: running run_atlas (--nthreads 12)
[2025-12-02 02:32:12] Arguments: --nthreads 12
[2025-12-02 02:32:12] Threads: 12
[2025-12-02 02:32:12] Checking for CVMFS
[2025-12-02 02:32:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 02:32:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 02:32:12] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 02:32:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 02:32:13] 2.13.3.0 9777 15041 109968 153539 2 68 3209293 4097025 1037 130560 0 11393999 99.928 1291378 1640 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-12-02 02:32:13] CVMFS is ok
[2025-12-02 02:32:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 02:32:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 02:32:13] Further information can be found at the LHC@home message board.
[2025-12-02 02:32:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 02:32:13] Checking for apptainer binary...
[2025-12-02 02:32:13] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-12-02 02:32:13] apptainer is not installed, using version from CVMFS
[2025-12-02 02:32:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 02:32:13] pckelar6.cern.ch
[2025-12-02 02:32:13] apptainer works
[2025-12-02 02:32:13] Set ATHENA_PROC_NUMBER=12
[2025-12-02 02:32:13] Set ATHENA_CORE_NUMBER=12
[2025-12-02 02:32:13] Starting ATLAS job with PandaID=6905379997
[2025-12-02 02:32:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 13:07:34]  *** The last 200 lines of the pilot log: ***
[2025-12-02 13:07:35] 2025-12-02 12:06:29,541 | INFO     | monitor loop #2687: job 0:6905379997 is in state 'finished'
[2025-12-02 13:07:35] 2025-12-02 12:06:29,542 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 13:07:35] 2025-12-02 12:06:31,071 | INFO     | time since job start (38046s) is within the limit (172800.0s)
[2025-12-02 13:07:35] 2025-12-02 12:06:31,419 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-02 13:07:35] 2025-12-02 12:06:31,424 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2816.3645416666664
[2025-12-02 13:07:35] 2025-12-02 12:06:31,429 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6905379997/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 13:07:35] 2025-12-02 12:06:31,429 | INFO     | extracted standard info from prmon json
[2025-12-02 13:07:35] 2025-12-02 12:06:31,430 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 13:07:35] 2025-12-02 12:06:31,430 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 13:07:35] 2025-12-02 12:06:31,446 | INFO     | fitting pss+swap vs Time
[2025-12-02 13:07:35] 2025-12-02 12:06:31,447 | INFO     | sum of square deviations: 74979199334.72868
[2025-12-02 13:07:35] 2025-12-02 12:06:31,458 | INFO     | sum of deviations: 1264071975896.7236
[2025-12-02 13:07:35] 2025-12-02 12:06:31,459 | INFO     | mean x: 1764658158.9791331
[2025-12-02 13:07:35] 2025-12-02 12:06:31,459 | INFO     | mean y: 4221060.747993579
[2025-12-02 13:07:35] 2025-12-02 12:06:31,459 | INFO     | intersect: -29746095635.016434
[2025-12-02 13:07:35] 2025-12-02 12:06:31,460 | INFO     | chi2: 6.016407067434081
[2025-12-02 13:07:35] 2025-12-02 12:06:31,461 | INFO     | sum of square deviations: 73188551802.3963
[2025-12-02 13:07:35] 2025-12-02 12:06:31,472 | INFO     | sum of deviations: 1527883378861.3591
[2025-12-02 13:07:35] 2025-12-02 12:06:31,472 | INFO     | mean x: 1764658006.487055
[2025-12-02 13:07:35] 2025-12-02 12:06:31,473 | INFO     | mean y: 4243505.669902912
[2025-12-02 13:07:35] 2025-12-02 12:06:31,473 | INFO     | intersect: -36834737060.11189
[2025-12-02 13:07:35] 2025-12-02 12:06:31,474 | INFO     | chi2: 3.526304283856475
[2025-12-02 13:07:35] 2025-12-02 12:06:31,474 | INFO     | current chi2=3.526304283856475 (change=41.38853564374264 %)
[2025-12-02 13:07:35] 2025-12-02 12:06:31,475 | INFO     | sum of square deviations: 71426573966.95921
[2025-12-02 13:07:35] 2025-12-02 12:06:31,486 | INFO     | sum of deviations: 1590010568749.0503
[2025-12-02 13:07:35] 2025-12-02 12:06:31,486 | INFO     | mean x: 1764657853.9918435
[2025-12-02 13:07:35] 2025-12-02 12:06:31,486 | INFO     | mean y: 4248858.009787928
[2025-12-02 13:07:35] 2025-12-02 12:06:31,486 | INFO     | intersect: -39278394593.02538
[2025-12-02 13:07:35] 2025-12-02 12:06:31,487 | INFO     | chi2: 3.165422938781798
[2025-12-02 13:07:35] 2025-12-02 12:06:31,487 | INFO     | current chi2=3.165422938781798 (change=10.233981982973003 %)
[2025-12-02 13:07:35] 2025-12-02 12:06:31,488 | INFO     | right removable region: 612
[2025-12-02 13:07:35] 2025-12-02 12:06:31,488 | INFO     | sum of square deviations: 73188179702.3963
[2025-12-02 13:07:35] 2025-12-02 12:06:31,500 | INFO     | sum of deviations: 958926187849.0792
[2025-12-02 13:07:35] 2025-12-02 12:06:31,500 | INFO     | mean x: 1764658311.487055
[2025-12-02 13:07:35] 2025-12-02 12:06:31,500 | INFO     | mean y: 4247021.6974110035
[2025-12-02 13:07:35] 2025-12-02 12:06:31,500 | INFO     | intersect: -23116659583.3219
[2025-12-02 13:07:35] 2025-12-02 12:06:31,501 | INFO     | chi2: 3.124979722803152
[2025-12-02 13:07:35] 2025-12-02 12:06:31,501 | INFO     | current chi2=3.124979722803152 (change=48.05903776494439 %)
[2025-12-02 13:07:35] 2025-12-02 12:06:31,502 | INFO     | sum of square deviations: 71426093289.89555
[2025-12-02 13:07:35] 2025-12-02 12:06:31,513 | INFO     | sum of deviations: 880119919387.098
[2025-12-02 13:07:35] 2025-12-02 12:06:31,513 | INFO     | mean x: 1764658463.9869494
[2025-12-02 13:07:35] 2025-12-02 12:06:31,513 | INFO     | mean y: 4253839.51223491
[2025-12-02 13:07:35] 2025-12-02 12:06:31,514 | INFO     | intersect: -21740055467.261353
[2025-12-02 13:07:35] 2025-12-02 12:06:31,514 | INFO     | chi2: 3.0257683095798154
[2025-12-02 13:07:35] 2025-12-02 12:06:31,515 | INFO     | current chi2=3.0257683095798154 (change=3.174785823389047 %)
[2025-12-02 13:07:35] 2025-12-02 12:06:31,515 | INFO     | left removable region: 20
[2025-12-02 13:07:35] 2025-12-02 12:06:31,516 | INFO     | sum of square deviations: 64334259268.0
[2025-12-02 13:07:35] 2025-12-02 12:06:31,526 | INFO     | sum of deviations: 1102574895812.0
[2025-12-02 13:07:35] 2025-12-02 12:06:31,526 | INFO     | mean x: 1764658433.5
[2025-12-02 13:07:35] 2025-12-02 12:06:31,526 | INFO     | mean y: 4291472.402027027
[2025-12-02 13:07:35] 2025-12-02 12:06:31,526 | INFO     | intersect: -30238818662.042458
[2025-12-02 13:07:35] 2025-12-02 12:06:31,527 | INFO     | chi2: 0.11119030925700048
[2025-12-02 13:07:35] 2025-12-02 12:06:31,527 | INFO     | current memory leak: 17.14 B/s (using 592 data points, chi2=0.11)
[2025-12-02 13:07:35] 2025-12-02 12:06:31,528 | INFO     | could have reported an average CPU frequency of 2802 MHz (24 samples)
[2025-12-02 13:07:35] 2025-12-02 12:06:31,529 | INFO     | ..............................
[2025-12-02 13:07:35] 2025-12-02 12:06:31,529 | INFO     | . Timing measurements:
[2025-12-02 13:07:35] 2025-12-02 12:06:31,529 | INFO     | . get job = 0 s
[2025-12-02 13:07:35] 2025-12-02 12:06:31,529 | INFO     | . initial setup = 1 s
[2025-12-02 13:07:35] 2025-12-02 12:06:31,529 | INFO     | . payload setup = 16 s
[2025-12-02 13:07:35] 2025-12-02 12:06:31,529 | INFO     | . stage-in = 0 s
[2025-12-02 13:07:35] 2025-12-02 12:06:31,529 | INFO     | . payload execution = 37994 s
[2025-12-02 13:07:35] 2025-12-02 12:06:31,530 | INFO     | . stage-out = 2 s
[2025-12-02 13:07:35] 2025-12-02 12:06:31,530 | INFO     | . log creation = 0 s
[2025-12-02 13:07:35] 2025-12-02 12:06:31,530 | INFO     | ..............................
[2025-12-02 13:07:35] 2025-12-02 12:06:32,124 | INFO     | 
[2025-12-02 13:07:35] 2025-12-02 12:06:32,125 | INFO     | job summary report
[2025-12-02 13:07:35] 2025-12-02 12:06:32,125 | INFO     | --------------------------------------------------
[2025-12-02 13:07:35] 2025-12-02 12:06:32,125 | INFO     | PanDA job id: 6905379997
[2025-12-02 13:07:35] 2025-12-02 12:06:32,125 | INFO     | task id: 47530725
[2025-12-02 13:07:35] 2025-12-02 12:06:32,125 | INFO     | errors: (none)
[2025-12-02 13:07:35] 2025-12-02 12:06:32,126 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 13:07:35] 2025-12-02 12:06:32,126 | INFO     | pilot state: finished 
[2025-12-02 13:07:35] 2025-12-02 12:06:32,126 | INFO     | transexitcode: 0
[2025-12-02 13:07:35] 2025-12-02 12:06:32,126 | INFO     | exeerrorcode: 0
[2025-12-02 13:07:35] 2025-12-02 12:06:32,126 | INFO     | exeerrordiag: 
[2025-12-02 13:07:35] 2025-12-02 12:06:32,126 | INFO     | exitcode: 0
[2025-12-02 13:07:35] 2025-12-02 12:06:32,127 | INFO     | exitmsg: OK
[2025-12-02 13:07:35] 2025-12-02 12:06:32,127 | INFO     | cpuconsumptiontime: 423606 s
[2025-12-02 13:07:35] 2025-12-02 12:06:32,127 | INFO     | nevents: 1000
[2025-12-02 13:07:35] 2025-12-02 12:06:32,127 | INFO     | neventsw: 0
[2025-12-02 13:07:35] 2025-12-02 12:06:32,127 | INFO     | pid: 1386504
[2025-12-02 13:07:35] 2025-12-02 12:06:32,127 | INFO     | pgrp: 1386504
[2025-12-02 13:07:35] 2025-12-02 12:06:32,128 | INFO     | corecount: 12
[2025-12-02 13:07:35] 2025-12-02 12:06:32,128 | INFO     | event service: False
[2025-12-02 13:07:35] 2025-12-02 12:06:32,128 | INFO     | sizes: {0: 2284227, 1: 2284426, 7: 2284688, 12: 2284716, 38014: 2345417, 38015: 2345416, 38018: 2354594, 38020: 2354650, 38027: 2354896}
[2025-12-02 13:07:35] 2025-12-02 12:06:32,128 | INFO     | --------------------------------------------------
[2025-12-02 13:07:35] 2025-12-02 12:06:32,128 | INFO     | 
[2025-12-02 13:07:35] 2025-12-02 12:06:32,128 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-12-02 13:07:35] 2025-12-02 12:06:32,147 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 13:07:35] 2025-12-02 12:06:32,148 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 13:07:35] 2025-12-02 12:06:32,148 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 13:07:35] 2025-12-02 12:06:32,148 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 13:07:35] 2025-12-02 12:06:32,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 13:07:35] 2025-12-02 12:06:32,148 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 13:07:35] 2025-12-02 12:06:32,149 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 13:07:35] 2025-12-02 12:06:32,149 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 13:07:35] 2025-12-02 12:06:32,149 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 13:07:35] 2025-12-02 12:06:32,149 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 13:07:35] 2025-12-02 12:06:32,149 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 13:07:35] 2025-12-02 12:06:32,149 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 13:07:35] 2025-12-02 12:06:32,150 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 13:07:35] 2025-12-02 12:06:32,150 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 13:07:35] 2025-12-02 12:06:32,150 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 13:07:35] 2025-12-02 12:06:32,150 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 13:07:35] 2025-12-02 12:06:32,150 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 13:07:35] 2025-12-02 12:06:32,150 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 13:07:35] 2025-12-02 12:06:32,151 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 13:07:35] 2025-12-02 12:06:32,151 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 13:07:35] 2025-12-02 12:06:32,151 | INFO     | job 6905379997 has completed (purged errors)
[2025-12-02 13:07:35] 2025-12-02 12:06:32,151 | INFO     | overall cleanup function is called
[2025-12-02 13:07:35] 2025-12-02 12:06:33,176 | INFO     | --- collectZombieJob: --- 10, [1386504]
[2025-12-02 13:07:35] 2025-12-02 12:06:33,176 | INFO     | zombie collector waiting for pid 1386504
[2025-12-02 13:07:35] 2025-12-02 12:06:33,176 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 13:07:35] 2025-12-02 12:06:33,176 | INFO     | collected zombie processes
[2025-12-02 13:07:35] 2025-12-02 12:06:33,177 | INFO     | will attempt to kill all subprocesses of pid=1386504
[2025-12-02 13:07:35] 2025-12-02 12:06:33,376 | INFO     | process IDs to be killed: [1386504] (in reverse order)
[2025-12-02 13:07:35] 2025-12-02 12:06:33,439 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 13:07:35] 2025-12-02 12:06:33,440 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 13:07:35] 2025-12-02 12:06:33,447 | INFO     | did not find any defunct processes belonging to 1386504
[2025-12-02 13:07:35] 2025-12-02 12:06:33,454 | INFO     | did not find any defunct processes belonging to 1386504
[2025-12-02 13:07:35] 2025-12-02 12:06:33,455 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 13:07:35] 2025-12-02 12:06:33,455 | INFO     | ready for new job
[2025-12-02 13:07:35] 2025-12-02 12:06:33,456 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 13:07:35] 2025-12-02 12:06:33,458 | INFO     | ***************************************
[2025-12-02 13:07:35] 2025-12-02 12:06:33,458 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 13:07:35] 2025-12-02 12:06:33,459 | INFO     | ***************************************
[2025-12-02 13:07:35] 2025-12-02 12:06:33,459 | INFO     | 
[2025-12-02 13:07:35] 2025-12-02 12:06:33,460 | INFO     | architecture information:
[2025-12-02 13:07:35] 2025-12-02 12:06:33,461 | INFO     | executing command: cat /etc/os-release
[2025-12-02 13:07:35] 2025-12-02 12:06:33,475 | INFO     | cat /etc/os-release:
[2025-12-02 13:07:35] NAME="CentOS Linux"
[2025-12-02 13:07:35] VERSION="7 (Core)"
[2025-12-02 13:07:35] ID="centos"
[2025-12-02 13:07:35] ID_LIKE="rhel fedora"
[2025-12-02 13:07:35] VERSION_ID="7"
[2025-12-02 13:07:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 13:07:35] ANSI_COLOR="0;31"
[2025-12-02 13:07:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 13:07:35] HOME_URL="https://www.centos.org/"
[2025-12-02 13:07:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 13:07:35] 
[2025-12-02 13:07:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 13:07:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 13:07:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 13:07:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 13:07:35] 
[2025-12-02 13:07:35] 2025-12-02 12:06:33,476 | INFO     | ***************************************
[2025-12-02 13:07:35] 2025-12-02 12:06:33,978 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-12-02 13:07:35] 2025-12-02 12:06:33,994 | INFO     | sufficient remaining disk space (866113290240 B)
[2025-12-02 13:07:35] 2025-12-02 12:06:33,994 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 13:07:35] 2025-12-02 12:06:33,994 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 13:07:35] 2025-12-02 12:06:33,994 | INFO     | update_server=False
[2025-12-02 13:07:35] 2025-12-02 12:06:33,994 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 13:07:35] 2025-12-02 12:06:33,995 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 13:07:35] 2025-12-02 12:06:33,995 | INFO     | aborting loop
[2025-12-02 13:07:35] 2025-12-02 12:06:34,061 | INFO     | all payload control threads have been joined
[2025-12-02 13:07:35] 2025-12-02 12:06:34,488 | INFO     | all data control threads have been joined
[2025-12-02 13:07:35] 2025-12-02 12:06:34,848 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 13:07:35] 2025-12-02 12:06:34,965 | INFO     | all job control threads have been joined
[2025-12-02 13:07:35] 2025-12-02 12:06:35,000 | INFO     | [job] retrieve thread has finished
[2025-12-02 13:07:35] 2025-12-02 12:06:35,000 | INFO     | [job] job monitor thread has finished
[2025-12-02 13:07:35] 2025-12-02 12:06:35,066 | INFO     | [payload] control thread has finished
[2025-12-02 13:07:35] 2025-12-02 12:06:35,296 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 13:07:35] 2025-12-02 12:06:35,329 | INFO     | [data] copytool_in thread has finished
[2025-12-02 13:07:35] 2025-12-02 12:06:35,343 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 13:07:35] 2025-12-02 12:06:35,416 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 13:07:35] 2025-12-02 12:06:35,493 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 13:07:35] 2025-12-02 12:06:35,493 | INFO     | [data] control thread has finished
[2025-12-02 13:07:35] 2025-12-02 12:06:35,558 | INFO     | [payload] failed_post thread has finished
[2025-12-02 13:07:35] 2025-12-02 12:06:35,883 | INFO     | [job] validate thread has finished
[2025-12-02 13:07:35] 2025-12-02 12:06:35,971 | INFO     | [job] control thread has finished
[2025-12-02 13:07:35] 2025-12-02 12:06:35,980 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 13:07:35] 2025-12-02 12:06:36,207 | INFO     | [payload] validate_post thread has finished
[2025-12-02 13:07:35] 2025-12-02 12:06:36,670 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 13:07:35] 2025-12-02 12:06:37,499 | INFO     | [data] copytool_out thread has finished
[2025-12-02 13:07:35] 2025-12-02 12:06:37,674 | INFO     | [job] queue monitor thread has finished
[2025-12-02 13:07:35] 2025-12-02 12:06:38,854 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 13:07:35] 2025-12-02 12:07:04,387 | INFO     | PID=1378339 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 13:07:35] 2025-12-02 12:07:04,388 | INFO     | .. there are 2 such processes running
[2025-12-02 13:07:35] 2025-12-02 12:07:04,388 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 13:07:35] 2025-12-02 12:07:04,388 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 13:07:35] 2025-12-02 12:07:04,388 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 13:07:35] 2025-12-02 12:07:29,386 | INFO     | [monitor] cgroup control has ended
[2025-12-02 13:07:35] 2025-12-02 12:07:29,714 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139815676036928)>', '<ExcThread(monitor, started 139814993123072)>']
[2025-12-02 13:07:35] 2025-12-02 12:07:30,514 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 13:07:35] 2025-12-02 12:07:30,514 | INFO     | [monitor] control thread has ended
[2025-12-02 13:07:35] 2025-12-02 12:07:34,735 | INFO     | all workflow threads have been joined
[2025-12-02 13:07:35] 2025-12-02 12:07:34,736 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 13:07:35] 2025-12-02 12:07:34,736 | INFO     | traces error code: 0
[2025-12-02 13:07:35] 2025-12-02 12:07:34,736 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 13:07:35] 2025-12-02 12:07:34,855 [wrapper] ==== pilot stdout END ====
[2025-12-02 13:07:35] 2025-12-02 12:07:34,858 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 13:07:35] 2025-12-02 12:07:34,861 [wrapper] pilotpid: 1378339
[2025-12-02 13:07:35] 2025-12-02 12:07:34,864 [wrapper] Pilot exit status: 0
[2025-12-02 13:07:35] 2025-12-02 12:07:34,874 [wrapper] pandaids: 6905379997
[2025-12-02 13:07:35] 2025-12-02 12:07:34,917 [wrapper] cleanup supervisor_pilot 1610259 1378340
[2025-12-02 13:07:35] 2025-12-02 12:07:34,920 [wrapper] Test setup, not cleaning
[2025-12-02 13:07:35] 2025-12-02 12:07:34,923 [wrapper] apfmon messages muted
[2025-12-02 13:07:35] 2025-12-02 12:07:34,927 [wrapper] ==== wrapper stdout END ====
[2025-12-02 13:07:35] 2025-12-02 12:07:34,929 [wrapper] ==== wrapper stderr END ====
[2025-12-02 13:07:35]  *** Error codes and diagnostics ***
[2025-12-02 13:07:35]     "exeErrorCode": 0,
[2025-12-02 13:07:35]     "exeErrorDiag": "",
[2025-12-02 13:07:35]     "pilotErrorCode": 0,
[2025-12-02 13:07:35]     "pilotErrorDiag": "",
[2025-12-02 13:07:35]  *** Listing of results directory ***
[2025-12-02 13:07:35] total 1064488
[2025-12-02 13:07:35] -rw-r--r--. 1 boinc boinc    576529 Nov 30 01:16 pilot3.tar.gz
[2025-12-02 13:07:35] -rwx------. 1 boinc boinc     36292 Nov 30 01:18 runpilot2-wrapper.sh
[2025-12-02 13:07:35] -rw-r--r--. 1 boinc boinc      5112 Nov 30 01:23 queuedata.json
[2025-12-02 13:07:35] -rw-r--r--. 1 boinc boinc       100 Dec  2 02:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 13:07:35] -rwxr-xr-x. 1 boinc boinc      7986 Dec  2 02:32 run_atlas
[2025-12-02 13:07:35] -rw-r--r--. 1 boinc boinc       105 Dec  2 02:32 job.xml
[2025-12-02 13:07:35] -rw-r--r--. 1 boinc boinc      6293 Dec  2 02:32 init_data.xml
[2025-12-02 13:07:35] -rw-r--r--. 2 boinc boinc 375633319 Dec  2 02:32 EVNT.47530720._000055.pool.root.1
[2025-12-02 13:07:35] -rw-r--r--. 2 boinc boinc     15847 Dec  2 02:32 start_atlas.sh
[2025-12-02 13:07:35] drwxrwx--x. 2 boinc boinc        68 Dec  2 02:32 shared
[2025-12-02 13:07:35] -rw-r--r--. 2 boinc boinc    590136 Dec  2 02:32 input.tar.gz
[2025-12-02 13:07:35] -rw-r--r--. 1 boinc boinc         0 Dec  2 02:32 boinc_lockfile
[2025-12-02 13:07:35] -rw-r--r--. 1 boinc boinc      2877 Dec  2 02:32 pandaJob.out
[2025-12-02 13:07:35] -rw-------. 1 boinc boinc    992016 Dec  2 02:32 agis_schedconf.cvmfs.json
[2025-12-02 13:07:35] drwx------. 5 boinc boinc      4096 Dec  2 02:32 pilot3
[2025-12-02 13:07:35] -rw-r--r--. 1 boinc boinc       533 Dec  2 12:57 boinc_task_state.xml
[2025-12-02 13:07:35] -rw-------. 1 boinc boinc 695074789 Dec  2 13:05 HITS.47530725._002489.pool.root.1
[2025-12-02 13:07:35] -rw-------. 1 boinc boinc      1036 Dec  2 13:06 memory_monitor_summary.json
[2025-12-02 13:07:35] -rw-------. 1 boinc boinc        95 Dec  2 13:06 pilot_heartbeat.json
[2025-12-02 13:07:35] -rw-------. 1 boinc boinc   1516240 Dec  2 13:06 agis_ddmendpoints.agis.ALL.json
[2025-12-02 13:07:35] -rw-------. 1 boinc boinc   2424829 Dec  2 13:06 log.47530725._002489.job.log.tgz.1
[2025-12-02 13:07:35] -rw-------. 1 boinc boinc     27956 Dec  2 13:06 heartbeat.json
[2025-12-02 13:07:35] -rw-r--r--. 1 boinc boinc        29 Dec  2 13:07 wrapper_checkpoint.txt
[2025-12-02 13:07:35] -rw-r--r--. 1 boinc boinc      8192 Dec  2 13:07 boinc_mmap_file
[2025-12-02 13:07:35] -rw-------. 1 boinc boinc      4824 Dec  2 13:07 pilotlog.txt
[2025-12-02 13:07:35] -rw-------. 1 boinc boinc   5269347 Dec  2 13:07 log.47530725._002489.job.log.1
[2025-12-02 13:07:35] -rw-------. 1 boinc boinc       353 Dec  2 13:07 output.list
[2025-12-02 13:07:35] -rw-r--r--. 1 boinc boinc       620 Dec  2 13:07 runtime_log
[2025-12-02 13:07:35] -rw-------. 1 boinc boinc   7731200 Dec  2 13:07 result.tar.gz
[2025-12-02 13:07:35] -rw-r--r--. 1 boinc boinc      8842 Dec  2 13:07 runtime_log.err
[2025-12-02 13:07:35] -rw-------. 1 boinc boinc       665 Dec  2 13:07 NZVMDmAKkj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDme2LKDmHpxZPm.diag
[2025-12-02 13:07:35] -rw-r--r--. 1 boinc boinc     21433 Dec  2 13:07 stderr.txt
[2025-12-02 13:07:35] HITS file was successfully produced:
[2025-12-02 13:07:35] -rw-------. 1 boinc boinc 695074789 Dec  2 13:05 shared/HITS.pool.root.1
[2025-12-02 13:07:35]  *** Contents of shared directory: ***
[2025-12-02 13:07:35] total 1053764
[2025-12-02 13:07:35] -rw-r--r--. 2 boinc boinc 375633319 Dec  2 02:32 ATLAS.root_0
[2025-12-02 13:07:35] -rw-r--r--. 2 boinc boinc     15847 Dec  2 02:32 start_atlas.sh
[2025-12-02 13:07:35] -rw-r--r--. 2 boinc boinc    590136 Dec  2 02:32 input.tar.gz
[2025-12-02 13:07:35] -rw-------. 1 boinc boinc 695074789 Dec  2 13:05 HITS.pool.root.1
[2025-12-02 13:07:35] -rw-------. 1 boinc boinc   7731200 Dec  2 13:07 result.tar.gz
13:07:36 (1374502): run_atlas exited; CPU time 423791.736304
13:07:36 (1374502): called boinc_finish(0)

</stderr_txt>
]]>

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