Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:21:08 (1894762): wrapper (7.7.26015): starting
13:21:08 (1894762): wrapper: running run_atlas (--nthreads 12)
[2025-12-01 13:21:08] Arguments: --nthreads 12
[2025-12-01 13:21:08] Threads: 12
[2025-12-01 13:21:08] Checking for CVMFS
[2025-12-01 13:21:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 13:21:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 13:21:09] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 13:21:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 13:21:09] 2.11.5.0 2639569 36080 265768 153532 2 14 37069487 45568001 23019 130560 0 321258404 99.803 182637181 29793 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-01 13:21:09] CVMFS is ok
[2025-12-01 13:21:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 13:21:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 13:21:09] Further information can be found at the LHC@home message board.
[2025-12-01 13:21:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 13:21:09] Checking for apptainer binary...
[2025-12-01 13:21:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 13:21:09] Running /usr/bin/apptainer --version
[2025-12-01 13:21:09] apptainer version 1.4.1-1.el9
[2025-12-01 13:21:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 13:21:10] wns0026.triumf.lcg
[2025-12-01 13:21:10] apptainer works
[2025-12-01 13:21:10] Set ATHENA_PROC_NUMBER=12
[2025-12-01 13:21:10] Set ATHENA_CORE_NUMBER=12
[2025-12-01 13:21:10] Starting ATLAS job with PandaID=6905026957
[2025-12-01 13:21:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 13:27:58]  *** The last 200 lines of the pilot log: ***
[2025-12-01 13:27:58] 2025-12-01 21:27:25,796 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-01 13:27:58] 2025-12-01 21:27:25,796 | WARNING  | wrong length of table data, x=[1764624172.0, 1764624233.0, 1764624294.0], y=[1078.0, 751428.0, 741094.0] (must be same and length>=4)
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | could have reported an average CPU frequency of 2690 MHz (4 samples)
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | ..............................
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . Timing measurements:
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . get job = 0 s
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . initial setup = 4 s
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . payload setup = 26 s
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . stage-in = 0 s
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . payload execution = 151 s
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . stage-out = 0 s
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . log creation = 0 s
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | ..............................
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905026957/pilotlog.txt
[2025-12-01 13:27:58] 2025-12-01 21:27:25,827 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-01 13:27:58] - Log from pilotlog.txt -
[2025-12-01 13:27:58] 2025-12-01 21:27:25,795 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6905026957/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 13:27:58] 2025-12-01 21:27:25,795 | INFO     | extracted standard info from prmon json
[2025-12-01 13:27:58] 2025-12-01 21:27:25,795 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 13:27:58] 2025-12-01 21:27:25,795 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 13:27:58] 2025-12-01 21:27:25,796 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-01 13:27:58] 2025-12-01 21:27:25,796 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-01 13:27:58] 2025-12-01 21:27:25,796 | WARNING  | wrong length of table data, x=[1764624172.0, 1764624233.0, 1764624294.0], y=[1078.0, 751428.0, 741094.0] (must be same and length>=4)
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | could have reported an average CPU frequency of 2690 MHz (4 samples)
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | ..............................
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . Timing measurements:
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . get job = 0 s
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . initial setup = 4 s
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . payload setup = 26 s
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . stage-in = 0 s
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . payload execution = 151 s
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . stage-out = 0 s
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . log creation = 0 s
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | ..............................
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905026957/pilotlog.txt
[2025-12-01 13:27:58] 2025-12-01 21:27:25,827 | WARNING  | 
[2025-12-01 13:27:58] [begin log extracts]
[2025-12-01 13:27:58] - Log from pilotlog.txt -
[2025-12-01 13:27:58] 2025-12-01 21:27:25,795 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6905026957/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 13:27:58] 2025-12-01 21:27:25,795 | INFO     | extracted standard info from prmon json
[2025-12-01 13:27:58] 2025-12-01 21:27:25,795 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 13:27:58] 2025-12-01 21:27:25,795 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 13:27:58] 2025-12-01 21:27:25,796 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-01 13:27:58] 2025-12-01 21:27:25,796 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-01 13:27:58] 2025-12-01 21:27:25,796 | WARNING  | wrong length of table data, x=[1764624172.0, 1764624233.0, 1764624294.0], y=[1078.0, 751428.0, 741094.0] (must be same and length>=4)
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | could have reported an average CPU frequency of 2690 MHz (4 samples)
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | ..............................
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . Timing measurements:
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . get job = 0 s
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . initial setup = 4 s
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . payload setup = 26 s
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . stage-in = 0 s
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . payload execution = 151 s
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . stage-out = 0 s
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | . log creation = 0 s
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | ..............................
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-01 13:27:58] 2025-12-01 21:27:25,797 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905026957/pilotlog.txt
[2025-12-01 13:27:58] [end log extracts]
[2025-12-01 13:27:58] 2025-12-01 21:27:25,828 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-12-01 13:27:58] 2025-12-01 21:27:25,828 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-01 13:27:58] 2025-12-01 21:27:25,999 | INFO     | 
[2025-12-01 13:27:58] 2025-12-01 21:27:26,000 | INFO     | job summary report
[2025-12-01 13:27:58] 2025-12-01 21:27:26,000 | INFO     | --------------------------------------------------
[2025-12-01 13:27:58] 2025-12-01 21:27:26,000 | INFO     | PanDA job id: 6905026957
[2025-12-01 13:27:58] 2025-12-01 21:27:26,000 | INFO     | task id: 47538113
[2025-12-01 13:27:58] 2025-12-01 21:27:26,000 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-01 13:25:03,416 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-01 13:27:58] 2025-12-01 21:27:26,000 | INFO     | error 2/2: 1165: Local output file is missing
[2025-12-01 13:27:58] 2025-12-01 21:27:26,000 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 13:27:58] 2025-12-01 21:27:26,000 | INFO     | pilot state: failed 
[2025-12-01 13:27:58] 2025-12-01 21:27:26,001 | INFO     | transexitcode: 65
[2025-12-01 13:27:58] 2025-12-01 21:27:26,001 | INFO     | exeerrorcode: 65
[2025-12-01 13:27:58] 2025-12-01 21:27:26,001 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-12-01 13:27:58] 2025-12-01 21:27:26,001 | INFO     | exitcode: 65
[2025-12-01 13:27:58] 2025-12-01 21:27:26,001 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-12-01 13:27:58] 2025-12-01 21:27:26,001 | INFO     | cpuconsumptiontime: 62 s
[2025-12-01 13:27:58] 2025-12-01 21:27:26,006 | INFO     | nevents: 0
[2025-12-01 13:27:58] 2025-12-01 21:27:26,006 | INFO     | neventsw: 0
[2025-12-01 13:27:58] 2025-12-01 21:27:26,006 | INFO     | pid: 1905893
[2025-12-01 13:27:58] 2025-12-01 21:27:26,006 | INFO     | pgrp: 1905893
[2025-12-01 13:27:58] 2025-12-01 21:27:26,006 | INFO     | corecount: 12
[2025-12-01 13:27:58] 2025-12-01 21:27:26,006 | INFO     | event service: False
[2025-12-01 13:27:58] 2025-12-01 21:27:26,006 | INFO     | sizes: {0: 2284226, 1: 2284425, 2: 2284425, 13: 2284453, 16: 2284771, 24: 2284799, 182: 2308475, 183: 2308479, 184: 2312797, 186: 2312825, 317: 2313019}
[2025-12-01 13:27:58] 2025-12-01 21:27:26,006 | INFO     | --------------------------------------------------
[2025-12-01 13:27:58] 2025-12-01 21:27:26,006 | INFO     | 
[2025-12-01 13:27:58] 2025-12-01 21:27:26,006 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-01 13:27:58] 2025-12-01 21:27:26,252 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 13:27:58] 2025-12-01 21:27:26,253 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 13:27:58] 2025-12-01 21:27:26,253 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 13:27:58] 2025-12-01 21:27:26,253 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 13:27:58] 2025-12-01 21:27:26,253 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 13:27:58] 2025-12-01 21:27:26,253 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 13:27:58] 2025-12-01 21:27:26,253 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 13:27:58] 2025-12-01 21:27:26,253 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 13:27:58] 2025-12-01 21:27:26,253 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 13:27:58] 2025-12-01 21:27:26,253 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 13:27:58] 2025-12-01 21:27:26,253 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 13:27:58] 2025-12-01 21:27:26,253 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 13:27:58] 2025-12-01 21:27:26,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 13:27:58] 2025-12-01 21:27:26,253 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 13:27:58] 2025-12-01 21:27:26,253 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 13:27:58] 2025-12-01 21:27:26,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 13:27:58] 2025-12-01 21:27:26,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 13:27:58] 2025-12-01 21:27:26,253 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 13:27:58] 2025-12-01 21:27:26,253 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 13:27:58] 2025-12-01 21:27:26,254 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 13:27:58] 2025-12-01 21:27:26,254 | INFO     | job 6905026957 has completed (purged errors)
[2025-12-01 13:27:58] 2025-12-01 21:27:26,254 | INFO     | overall cleanup function is called
[2025-12-01 13:27:58] 2025-12-01 21:27:27,283 | INFO     | --- collectZombieJob: --- 10, [1905893]
[2025-12-01 13:27:58] 2025-12-01 21:27:27,283 | INFO     | zombie collector waiting for pid 1905893
[2025-12-01 13:27:58] 2025-12-01 21:27:27,283 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 13:27:58] 2025-12-01 21:27:27,283 | INFO     | collected zombie processes
[2025-12-01 13:27:58] 2025-12-01 21:27:27,283 | INFO     | will attempt to kill all subprocesses of pid=1905893
[2025-12-01 13:27:58] 2025-12-01 21:27:28,374 | INFO     | process IDs to be killed: [1905893] (in reverse order)
[2025-12-01 13:27:58] 2025-12-01 21:27:28,724 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 13:27:58] 2025-12-01 21:27:28,725 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 13:27:58] 2025-12-01 21:27:28,758 | INFO     | did not find any defunct processes belonging to 1905893
[2025-12-01 13:27:58] 2025-12-01 21:27:28,805 | INFO     | did not find any defunct processes belonging to 1905893
[2025-12-01 13:27:58] 2025-12-01 21:27:28,806 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 13:27:58] 2025-12-01 21:27:28,806 | INFO     | ready for new job
[2025-12-01 13:27:58] 2025-12-01 21:27:28,806 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 13:27:58] 2025-12-01 21:27:28,814 | INFO     | ***************************************
[2025-12-01 13:27:58] 2025-12-01 21:27:28,814 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 13:27:58] 2025-12-01 21:27:28,814 | INFO     | ***************************************
[2025-12-01 13:27:58] 2025-12-01 21:27:28,814 | INFO     | 
[2025-12-01 13:27:58] 2025-12-01 21:27:28,816 | INFO     | architecture information:
[2025-12-01 13:27:58] 2025-12-01 21:27:28,835 | INFO     | executing command: cat /etc/os-release
[2025-12-01 13:27:58] 2025-12-01 21:27:28,871 | INFO     | cat /etc/os-release:
[2025-12-01 13:27:58] NAME="CentOS Linux"
[2025-12-01 13:27:58] VERSION="7 (Core)"
[2025-12-01 13:27:58] ID="centos"
[2025-12-01 13:27:58] ID_LIKE="rhel fedora"
[2025-12-01 13:27:58] VERSION_ID="7"
[2025-12-01 13:27:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 13:27:58] ANSI_COLOR="0;31"
[2025-12-01 13:27:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 13:27:58] HOME_URL="https://www.centos.org/"
[2025-12-01 13:27:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 13:27:58] 
[2025-12-01 13:27:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 13:27:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 13:27:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 13:27:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 13:27:58] 
[2025-12-01 13:27:58] 2025-12-01 21:27:28,871 | INFO     | ***************************************
[2025-12-01 13:27:58] 2025-12-01 21:27:29,375 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-01 13:27:58] 2025-12-01 21:27:29,412 | INFO     | sufficient remaining disk space (2032451715072 B)
[2025-12-01 13:27:58] 2025-12-01 21:27:29,413 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 13:27:58] 2025-12-01 21:27:29,413 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 13:27:58] 2025-12-01 21:27:29,413 | INFO     | update_server=False
[2025-12-01 13:27:58] 2025-12-01 21:27:29,413 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 13:27:58] 2025-12-01 21:27:29,439 | INFO     | all data control threads have been joined
[2025-12-01 13:27:58] 2025-12-01 21:27:29,450 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 13:27:58] 2025-12-01 21:27:29,522 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 13:27:58] 2025-12-01 21:27:29,522 | INFO     | aborting loop
[2025-12-01 13:27:58] 2025-12-01 21:27:29,891 | INFO     | all payload control threads have been joined
[2025-12-01 13:27:58] 2025-12-01 21:27:30,419 | INFO     | [job] retrieve thread has finished
[2025-12-01 13:27:58] 2025-12-01 21:27:30,445 | INFO     | [data] control thread has finished
[2025-12-01 13:27:58] 2025-12-01 21:27:30,528 | INFO     | [job] job monitor thread has finished
[2025-12-01 13:27:58] 2025-12-01 21:27:30,554 | INFO     | [payload] validate_post thread has finished
[2025-12-01 13:27:58] 2025-12-01 21:27:30,556 | INFO     | all job control threads have been joined
[2025-12-01 13:27:58] 2025-12-01 21:27:30,659 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 13:27:58] 2025-12-01 21:27:30,701 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 13:27:58] 2025-12-01 21:27:30,897 | INFO     | [payload] control thread has finished
[2025-12-01 13:27:58] 2025-12-01 21:27:30,952 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 13:27:58] 2025-12-01 21:27:30,977 | INFO     | [data] copytool_in thread has finished
[2025-12-01 13:27:58] 2025-12-01 21:27:31,031 | INFO     | [payload] failed_post thread has finished
[2025-12-01 13:27:58] 2025-12-01 21:27:31,430 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 13:27:58] 2025-12-01 21:27:31,457 | INFO     | [data] copytool_out thread has finished
[2025-12-01 13:27:58] 2025-12-01 21:27:31,556 | INFO     | [job] validate thread has finished
[2025-12-01 13:27:58] 2025-12-01 21:27:31,562 | INFO     | [job] control thread has finished
[2025-12-01 13:27:58] 2025-12-01 21:27:31,705 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 13:27:58] 2025-12-01 21:27:31,879 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 13:27:58] 2025-12-01 21:27:31,958 | INFO     | [job] queue monitor thread has finished
[2025-12-01 13:27:58] 2025-12-01 21:27:35,888 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 13:27:58] 2025-12-01 21:27:35,954 | INFO     | [monitor] cgroup control has ended
[2025-12-01 13:27:58] 2025-12-01 21:27:37,835 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139960595633984)>', '<ExcThread(monitor, started 139959688226560)>']
[2025-12-01 13:27:58] 2025-12-01 21:27:42,862 | INFO     | all workflow threads have been joined
[2025-12-01 13:27:58] 2025-12-01 21:27:42,863 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 13:27:58] 2025-12-01 21:27:42,863 | INFO     | traces error code: 0
[2025-12-01 13:27:58] 2025-12-01 21:27:42,863 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 13:27:58] 2025-12-01 21:27:57,796 | INFO     | PID=1898453 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-01 13:27:58] 2025-12-01 21:27:57,796 | INFO     | .. there are 35 such processes running
[2025-12-01 13:27:58] 2025-12-01 21:27:57,797 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 13:27:58] 2025-12-01 21:27:57,797 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 13:27:58] 2025-12-01 21:27:57,797 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 13:27:58] 2025-12-01 21:27:57,797 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 13:27:58] 2025-12-01 21:27:57,797 | INFO     | [monitor] control thread has ended
[2025-12-01 13:27:58] 2025-12-01 21:27:58,258 [wrapper] ==== pilot stdout END ====
[2025-12-01 13:27:58] 2025-12-01 21:27:58,276 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 13:27:58] 2025-12-01 21:27:58,278 [wrapper] pilotpid: 1898453
[2025-12-01 13:27:58] 2025-12-01 21:27:58,280 [wrapper] Pilot exit status: 0
[2025-12-01 13:27:58] 2025-12-01 21:27:58,361 [wrapper] pandaids: 6905026957
[2025-12-01 13:27:58] 2025-12-01 21:27:58,448 [wrapper] cleanup supervisor_pilot 1898459 1898454
[2025-12-01 13:27:58] 2025-12-01 21:27:58,450 [wrapper] Test setup, not cleaning
[2025-12-01 13:27:58] 2025-12-01 21:27:58,452 [wrapper] apfmon messages muted
[2025-12-01 13:27:58] 2025-12-01 21:27:58,454 [wrapper] ==== wrapper stdout END ====
[2025-12-01 13:27:58] 2025-12-01 21:27:58,456 [wrapper] ==== wrapper stderr END ====
[2025-12-01 13:27:58]  *** Error codes and diagnostics ***
[2025-12-01 13:27:58]     "exeErrorCode": 65,
[2025-12-01 13:27:58]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-12-01 13:27:58]     "pilotErrorCode": 1305,
[2025-12-01 13:27:58]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-12-01 13:27:58]  *** Listing of results directory ***
[2025-12-01 13:27:58] total 370816
[2025-12-01 13:27:58] -rw-r--r--. 1 boinc boinc    576529 Nov 29 16:16 pilot3.tar.gz
[2025-12-01 13:27:58] -rwx------. 1 boinc boinc     36292 Nov 29 16:18 runpilot2-wrapper.sh
[2025-12-01 13:27:58] -rw-r--r--. 1 boinc boinc      5112 Nov 29 16:23 queuedata.json
[2025-12-01 13:27:58] -rw-r--r--. 1 boinc boinc       100 Dec  1 13:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 13:27:58] -rwxr-xr-x. 1 boinc boinc      7986 Dec  1 13:21 run_atlas
[2025-12-01 13:27:58] -rw-r--r--. 1 boinc boinc       105 Dec  1 13:21 job.xml
[2025-12-01 13:27:58] -rw-r--r--. 1 boinc boinc      6596 Dec  1 13:21 init_data.xml
[2025-12-01 13:27:58] -rw-r--r--. 2 boinc boinc 375480464 Dec  1 13:21 EVNT.47528871._000050.pool.root.1
[2025-12-01 13:27:58] -rw-r--r--. 2 boinc boinc     15847 Dec  1 13:21 start_atlas.sh
[2025-12-01 13:27:58] drwxrwx--x. 2 boinc boinc      4096 Dec  1 13:21 shared
[2025-12-01 13:27:58] -rw-r--r--. 2 boinc boinc    590137 Dec  1 13:21 input.tar.gz
[2025-12-01 13:27:58] -rw-r--r--. 1 boinc boinc         0 Dec  1 13:21 boinc_lockfile
[2025-12-01 13:27:58] -rw-r--r--. 1 boinc boinc      2879 Dec  1 13:21 pandaJob.out
[2025-12-01 13:27:58] -rw-------. 1 boinc boinc    992004 Dec  1 13:21 agis_schedconf.cvmfs.json
[2025-12-01 13:27:58] -rw-------. 1 boinc boinc   1516240 Dec  1 13:21 agis_ddmendpoints.agis.ALL.json
[2025-12-01 13:27:58] drwx------. 5 boinc boinc      4096 Dec  1 13:21 pilot3
[2025-12-01 13:27:58] -rw-r--r--. 1 boinc boinc       524 Dec  1 13:24 boinc_task_state.xml
[2025-12-01 13:27:58] -rw-------. 1 boinc boinc      1003 Dec  1 13:25 memory_monitor_summary.json
[2025-12-01 13:27:58] -rw-------. 1 boinc boinc     51169 Dec  1 13:25 log.47538113._002183.job.log.tgz.1
[2025-12-01 13:27:58] -rw-------. 1 boinc boinc      9898 Dec  1 13:27 heartbeat.json
[2025-12-01 13:27:58] -rw-r--r--. 1 boinc boinc        23 Dec  1 13:27 wrapper_checkpoint.txt
[2025-12-01 13:27:58] -rw-r--r--. 1 boinc boinc      8192 Dec  1 13:27 boinc_mmap_file
[2025-12-01 13:27:58] -rw-------. 1 boinc boinc        95 Dec  1 13:27 pilot_heartbeat.json
[2025-12-01 13:27:58] -rw-------. 1 boinc boinc       823 Dec  1 13:27 pilotlog.txt
[2025-12-01 13:27:58] -rw-------. 1 boinc boinc    109813 Dec  1 13:27 log.47538113._002183.job.log.1
[2025-12-01 13:27:58] -rw-------. 1 boinc boinc       186 Dec  1 13:27 output.list
[2025-12-01 13:27:58] -rw-r--r--. 1 boinc boinc       620 Dec  1 13:27 runtime_log
[2025-12-01 13:27:58] -rw-------. 1 boinc boinc    184320 Dec  1 13:27 result.tar.gz
[2025-12-01 13:27:58] -rw-r--r--. 1 boinc boinc      8636 Dec  1 13:27 runtime_log.err
[2025-12-01 13:27:58] -rw-------. 1 boinc boinc       647 Dec  1 13:27 1IdNDmWKkj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmx5LKDmmnkUMn.diag
[2025-12-01 13:27:58] -rw-r--r--. 1 boinc boinc     22598 Dec  1 13:27 stderr.txt
[2025-12-01 13:27:58] No HITS result produced
[2025-12-01 13:27:58]  *** Contents of shared directory: ***
[2025-12-01 13:27:58] total 367464
[2025-12-01 13:27:58] -rw-r--r--. 2 boinc boinc 375480464 Dec  1 13:21 ATLAS.root_0
[2025-12-01 13:27:58] -rw-r--r--. 2 boinc boinc     15847 Dec  1 13:21 start_atlas.sh
[2025-12-01 13:27:58] -rw-r--r--. 2 boinc boinc    590137 Dec  1 13:21 input.tar.gz
[2025-12-01 13:27:58] -rw-------. 1 boinc boinc    184320 Dec  1 13:27 result.tar.gz
13:28:00 (1894762): run_atlas exited; CPU time 64.674342
13:28:00 (1894762): called boinc_finish(0)

</stderr_txt>
]]>

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