Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:30:58 (11124): wrapper (7.7.26015): starting
16:30:58 (11124): wrapper: running run_atlas (--nthreads 8)
[2025-12-01 16:30:58] Arguments: --nthreads 8
[2025-12-01 16:30:58] Threads: 8
[2025-12-01 16:30:58] Checking for CVMFS
[2025-12-01 16:30:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 16:30:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 16:30:58] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 16:30:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 16:30:58] 2.11.2.0 17210 125409 143904 153532 2 70 11897704 18432001 1831 130560 0 93528551 99.976 5293133 29647 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-01 16:30:58] CVMFS is ok
[2025-12-01 16:30:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 16:30:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 16:30:58] Further information can be found at the LHC@home message board.
[2025-12-01 16:30:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 16:30:58] Checking for apptainer binary...
[2025-12-01 16:30:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 16:30:58] Running /usr/bin/apptainer --version
[2025-12-01 16:30:58] apptainer version 1.3.2-1.el7
[2025-12-01 16:30:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 16:30:59] c-206-14.aglt2.org
[2025-12-01 16:30:59] apptainer works
[2025-12-01 16:30:59] Set ATHENA_PROC_NUMBER=8
[2025-12-01 16:30:59] Set ATHENA_CORE_NUMBER=8
[2025-12-01 16:30:59] Starting ATLAS job with PandaID=6895325340
[2025-12-01 16:30:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 11:59:26]  *** The last 200 lines of the pilot log: ***
[2025-12-02 11:59:26] 2025-12-02 16:58:53,149 | INFO     | time since job start (70062s) is within the limit (172800.0s)
[2025-12-02 11:59:26] 2025-12-02 16:58:53,860 | INFO     | monitor loop #5023: job 0:6895325340 is in state 'finished'
[2025-12-02 11:59:26] 2025-12-02 16:58:53,860 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 11:59:26] 2025-12-02 16:58:54,385 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-02 11:59:26] 2025-12-02 16:58:54,391 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2555.5833333333335
[2025-12-02 11:59:26] 2025-12-02 16:58:54,395 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895325340/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 11:59:26] 2025-12-02 16:58:54,396 | INFO     | extracted standard info from prmon json
[2025-12-02 11:59:26] 2025-12-02 16:58:54,396 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 11:59:26] 2025-12-02 16:58:54,396 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 11:59:26] 2025-12-02 16:58:54,427 | INFO     | fitting pss+swap vs Time
[2025-12-02 11:59:26] 2025-12-02 16:58:54,429 | INFO     | sum of square deviations: 469140325276.2674
[2025-12-02 11:59:26] 2025-12-02 16:58:54,463 | INFO     | sum of deviations: 2249146399526.8213
[2025-12-02 11:59:26] 2025-12-02 16:58:54,463 | INFO     | mean x: 1764659681.09669
[2025-12-02 11:59:26] 2025-12-02 16:58:54,463 | INFO     | mean y: 2874700.136759582
[2025-12-02 11:59:26] 2025-12-02 16:58:54,463 | INFO     | intersect: -8457233617.756222
[2025-12-02 11:59:26] 2025-12-02 16:58:54,464 | INFO     | chi2: 4.9758601100833655
[2025-12-02 11:59:26] 2025-12-02 16:58:54,465 | INFO     | sum of square deviations: 463037294184.47974
[2025-12-02 11:59:26] 2025-12-02 16:58:54,490 | INFO     | sum of deviations: 2551813183146.5205
[2025-12-02 11:59:26] 2025-12-02 16:58:54,490 | INFO     | mean x: 1764659528.5993001
[2025-12-02 11:59:26] 2025-12-02 16:58:54,490 | INFO     | mean y: 2882258.6474190727
[2025-12-02 11:59:26] 2025-12-02 16:58:54,490 | INFO     | intersect: -9722212254.04368
[2025-12-02 11:59:26] 2025-12-02 16:58:54,491 | INFO     | chi2: 2.8542065608577745
[2025-12-02 11:59:26] 2025-12-02 16:58:54,491 | INFO     | current chi2=2.8542065608577745 (change=42.63893080366451 %)
[2025-12-02 11:59:26] 2025-12-02 16:58:54,492 | INFO     | sum of square deviations: 456987426880.17584
[2025-12-02 11:59:26] 2025-12-02 16:58:54,515 | INFO     | sum of deviations: 2686617988077.058
[2025-12-02 11:59:26] 2025-12-02 16:58:54,515 | INFO     | mean x: 1764659376.1019332
[2025-12-02 11:59:26] 2025-12-02 16:58:54,516 | INFO     | mean y: 2885654.9736379613
[2025-12-02 11:59:26] 2025-12-02 16:58:54,516 | INFO     | intersect: -10371503975.4601
[2025-12-02 11:59:26] 2025-12-02 16:58:54,517 | INFO     | chi2: 2.3434657050557117
[2025-12-02 11:59:26] 2025-12-02 16:58:54,517 | INFO     | current chi2=2.3434657050557117 (change=17.89432001195351 %)
[2025-12-02 11:59:26] 2025-12-02 16:58:54,517 | INFO     | right removable region: 1137
[2025-12-02 11:59:26] 2025-12-02 16:58:54,518 | INFO     | sum of square deviations: 463036876334.47986
[2025-12-02 11:59:26] 2025-12-02 16:58:54,542 | INFO     | sum of deviations: 1951028419012.0244
[2025-12-02 11:59:26] 2025-12-02 16:58:54,542 | INFO     | mean x: 1764659833.5993001
[2025-12-02 11:59:26] 2025-12-02 16:58:54,542 | INFO     | mean y: 2882140.528433946
[2025-12-02 11:59:26] 2025-12-02 16:58:54,542 | INFO     | intersect: -7432597971.760175
[2025-12-02 11:59:26] 2025-12-02 16:58:54,543 | INFO     | chi2: 2.9395940131012517
[2025-12-02 11:59:26] 2025-12-02 16:58:54,543 | INFO     | current chi2=2.9395940131012517 (change=40.92289678433099 %)
[2025-12-02 11:59:26] 2025-12-02 16:58:54,544 | INFO     | sum of square deviations: 456986730382.5791
[2025-12-02 11:59:26] 2025-12-02 16:58:54,574 | INFO     | sum of deviations: 1875756214806.8108
[2025-12-02 11:59:26] 2025-12-02 16:58:54,574 | INFO     | mean x: 1764659986.1001759
[2025-12-02 11:59:26] 2025-12-02 16:58:54,575 | INFO     | mean y: 2884037.449033392
[2025-12-02 11:59:26] 2025-12-02 16:58:54,575 | INFO     | intersect: -7240372092.060869
[2025-12-02 11:59:26] 2025-12-02 16:58:54,576 | INFO     | chi2: 2.8889205832527765
[2025-12-02 11:59:26] 2025-12-02 16:58:54,576 | INFO     | current chi2=2.8889205832527765 (change=1.7238240934847702 %)
[2025-12-02 11:59:26] 2025-12-02 16:58:54,576 | INFO     | left removable region: 20
[2025-12-02 11:59:26] 2025-12-02 16:58:54,577 | INFO     | sum of square deviations: 432152302803.0991
[2025-12-02 11:59:26] 2025-12-02 16:58:54,599 | INFO     | sum of deviations: 2231125256027.451
[2025-12-02 11:59:26] 2025-12-02 16:58:54,599 | INFO     | mean x: 1764659955.6042972
[2025-12-02 11:59:26] 2025-12-02 16:58:54,600 | INFO     | mean y: 2898038.9059982095
[2025-12-02 11:59:26] 2025-12-02 16:58:54,600 | INFO     | intersect: -9107726548.099657
[2025-12-02 11:59:26] 2025-12-02 16:58:54,601 | INFO     | chi2: 0.19668989155863614
[2025-12-02 11:59:26] 2025-12-02 16:58:54,601 | INFO     | current memory leak: 5.16 B/s (using 1117 data points, chi2=0.20)
[2025-12-02 11:59:26] 2025-12-02 16:58:54,602 | INFO     | could have reported an average CPU frequency of 2614 MHz (42 samples)
[2025-12-02 11:59:26] 2025-12-02 16:58:54,602 | INFO     | ..............................
[2025-12-02 11:59:26] 2025-12-02 16:58:54,602 | INFO     | . Timing measurements:
[2025-12-02 11:59:26] 2025-12-02 16:58:54,602 | INFO     | . get job = 0 s
[2025-12-02 11:59:26] 2025-12-02 16:58:54,602 | INFO     | . initial setup = 2 s
[2025-12-02 11:59:26] 2025-12-02 16:58:54,602 | INFO     | . payload setup = 5 s
[2025-12-02 11:59:26] 2025-12-02 16:58:54,602 | INFO     | . stage-in = 0 s
[2025-12-02 11:59:26] 2025-12-02 16:58:54,602 | INFO     | . payload execution = 70028 s
[2025-12-02 11:59:26] 2025-12-02 16:58:54,602 | INFO     | . stage-out = 4 s
[2025-12-02 11:59:26] 2025-12-02 16:58:54,603 | INFO     | . log creation = 0 s
[2025-12-02 11:59:26] 2025-12-02 16:58:54,603 | INFO     | ..............................
[2025-12-02 11:59:26] 2025-12-02 16:58:55,114 | INFO     | 
[2025-12-02 11:59:26] 2025-12-02 16:58:55,114 | INFO     | job summary report
[2025-12-02 11:59:26] 2025-12-02 16:58:55,114 | INFO     | --------------------------------------------------
[2025-12-02 11:59:26] 2025-12-02 16:58:55,114 | INFO     | PanDA job id: 6895325340
[2025-12-02 11:59:26] 2025-12-02 16:58:55,114 | INFO     | task id: 47556137
[2025-12-02 11:59:26] 2025-12-02 16:58:55,114 | INFO     | errors: (none)
[2025-12-02 11:59:26] 2025-12-02 16:58:55,114 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 11:59:26] 2025-12-02 16:58:55,114 | INFO     | pilot state: finished 
[2025-12-02 11:59:26] 2025-12-02 16:58:55,114 | INFO     | transexitcode: 0
[2025-12-02 11:59:26] 2025-12-02 16:58:55,115 | INFO     | exeerrorcode: 0
[2025-12-02 11:59:26] 2025-12-02 16:58:55,115 | INFO     | exeerrordiag: 
[2025-12-02 11:59:26] 2025-12-02 16:58:55,115 | INFO     | exitcode: 0
[2025-12-02 11:59:26] 2025-12-02 16:58:55,115 | INFO     | exitmsg: OK
[2025-12-02 11:59:26] 2025-12-02 16:58:55,115 | INFO     | cpuconsumptiontime: 545332 s
[2025-12-02 11:59:26] 2025-12-02 16:58:55,115 | INFO     | nevents: 1000
[2025-12-02 11:59:26] 2025-12-02 16:58:55,115 | INFO     | neventsw: 0
[2025-12-02 11:59:26] 2025-12-02 16:58:55,115 | INFO     | pid: 23039
[2025-12-02 11:59:26] 2025-12-02 16:58:55,115 | INFO     | pgrp: 23039
[2025-12-02 11:59:26] 2025-12-02 16:58:55,115 | INFO     | corecount: 8
[2025-12-02 11:59:26] 2025-12-02 16:58:55,116 | INFO     | event service: False
[2025-12-02 11:59:26] 2025-12-02 16:58:55,116 | INFO     | sizes: {0: 2284311, 1: 2284311, 4: 2284601, 12: 2284629, 70037: 2341257, 70041: 2350251, 70042: 2350435, 70048: 2350681}
[2025-12-02 11:59:26] 2025-12-02 16:58:55,116 | INFO     | --------------------------------------------------
[2025-12-02 11:59:26] 2025-12-02 16:58:55,116 | INFO     | 
[2025-12-02 11:59:26] 2025-12-02 16:58:55,116 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-02 11:59:26] 2025-12-02 16:58:55,130 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 11:59:26] 2025-12-02 16:58:55,131 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 11:59:26] 2025-12-02 16:58:55,131 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 11:59:26] 2025-12-02 16:58:55,131 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 11:59:26] 2025-12-02 16:58:55,131 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 11:59:26] 2025-12-02 16:58:55,131 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 11:59:26] 2025-12-02 16:58:55,131 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 11:59:26] 2025-12-02 16:58:55,131 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 11:59:26] 2025-12-02 16:58:55,131 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 11:59:26] 2025-12-02 16:58:55,131 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 11:59:26] 2025-12-02 16:58:55,131 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 11:59:26] 2025-12-02 16:58:55,132 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 11:59:26] 2025-12-02 16:58:55,132 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 11:59:26] 2025-12-02 16:58:55,132 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 11:59:26] 2025-12-02 16:58:55,132 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 11:59:26] 2025-12-02 16:58:55,132 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 11:59:26] 2025-12-02 16:58:55,132 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 11:59:26] 2025-12-02 16:58:55,132 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 11:59:26] 2025-12-02 16:58:55,132 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 11:59:26] 2025-12-02 16:58:55,132 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 11:59:26] 2025-12-02 16:58:55,133 | INFO     | job 6895325340 has completed (purged errors)
[2025-12-02 11:59:26] 2025-12-02 16:58:55,133 | INFO     | overall cleanup function is called
[2025-12-02 11:59:26] 2025-12-02 16:58:56,144 | INFO     | --- collectZombieJob: --- 10, [23039]
[2025-12-02 11:59:26] 2025-12-02 16:58:56,145 | INFO     | zombie collector waiting for pid 23039
[2025-12-02 11:59:26] 2025-12-02 16:58:56,145 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 11:59:26] 2025-12-02 16:58:56,145 | INFO     | collected zombie processes
[2025-12-02 11:59:26] 2025-12-02 16:58:56,145 | INFO     | will attempt to kill all subprocesses of pid=23039
[2025-12-02 11:59:26] 2025-12-02 16:58:56,293 | INFO     | process IDs to be killed: [23039] (in reverse order)
[2025-12-02 11:59:26] 2025-12-02 16:58:56,355 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 11:59:26] 2025-12-02 16:58:56,356 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 11:59:26] 2025-12-02 16:58:56,361 | INFO     | did not find any defunct processes belonging to 23039
[2025-12-02 11:59:26] 2025-12-02 16:58:56,365 | INFO     | did not find any defunct processes belonging to 23039
[2025-12-02 11:59:26] 2025-12-02 16:58:56,367 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 11:59:26] 2025-12-02 16:58:56,367 | INFO     | ready for new job
[2025-12-02 11:59:26] 2025-12-02 16:58:56,367 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 11:59:26] 2025-12-02 16:58:56,371 | INFO     | ***************************************
[2025-12-02 11:59:26] 2025-12-02 16:58:56,371 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 11:59:26] 2025-12-02 16:58:56,371 | INFO     | ***************************************
[2025-12-02 11:59:26] 2025-12-02 16:58:56,371 | INFO     | 
[2025-12-02 11:59:26] 2025-12-02 16:58:56,372 | INFO     | architecture information:
[2025-12-02 11:59:26] 2025-12-02 16:58:56,372 | INFO     | executing command: cat /etc/os-release
[2025-12-02 11:59:26] 2025-12-02 16:58:56,384 | INFO     | cat /etc/os-release:
[2025-12-02 11:59:26] NAME="CentOS Linux"
[2025-12-02 11:59:26] VERSION="7 (Core)"
[2025-12-02 11:59:26] ID="centos"
[2025-12-02 11:59:26] ID_LIKE="rhel fedora"
[2025-12-02 11:59:26] VERSION_ID="7"
[2025-12-02 11:59:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 11:59:26] ANSI_COLOR="0;31"
[2025-12-02 11:59:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 11:59:26] HOME_URL="https://www.centos.org/"
[2025-12-02 11:59:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 11:59:26] 
[2025-12-02 11:59:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 11:59:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 11:59:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 11:59:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 11:59:26] 
[2025-12-02 11:59:26] 2025-12-02 16:58:56,384 | INFO     | ***************************************
[2025-12-02 11:59:26] 2025-12-02 16:58:56,887 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-02 11:59:26] 2025-12-02 16:58:56,905 | INFO     | sufficient remaining disk space (25943867392 B)
[2025-12-02 11:59:26] 2025-12-02 16:58:56,905 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 11:59:26] 2025-12-02 16:58:56,905 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 11:59:26] 2025-12-02 16:58:56,906 | INFO     | update_server=False
[2025-12-02 11:59:26] 2025-12-02 16:58:56,906 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 11:59:26] 2025-12-02 16:58:56,906 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 11:59:26] 2025-12-02 16:58:57,053 | INFO     | all job control threads have been joined
[2025-12-02 11:59:26] 2025-12-02 16:58:57,369 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 11:59:26] 2025-12-02 16:58:57,370 | INFO     | aborting loop
[2025-12-02 11:59:26] 2025-12-02 16:58:57,898 | INFO     | all data control threads have been joined
[2025-12-02 11:59:26] 2025-12-02 16:58:57,912 | INFO     | [job] retrieve thread has finished
[2025-12-02 11:59:26] 2025-12-02 16:58:57,916 | INFO     | [payload] validate_post thread has finished
[2025-12-02 11:59:26] 2025-12-02 16:58:58,059 | INFO     | [job] control thread has finished
[2025-12-02 11:59:26] 2025-12-02 16:58:58,075 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 11:59:26] 2025-12-02 16:58:58,177 | INFO     | all payload control threads have been joined
[2025-12-02 11:59:26] 2025-12-02 16:58:58,375 | INFO     | [job] job monitor thread has finished
[2025-12-02 11:59:26] 2025-12-02 16:58:58,513 | INFO     | [payload] failed_post thread has finished
[2025-12-02 11:59:26] 2025-12-02 16:58:58,579 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 11:59:26] 2025-12-02 16:58:58,597 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 11:59:26] 2025-12-02 16:58:58,904 | INFO     | [data] control thread has finished
[2025-12-02 11:59:26] 2025-12-02 16:58:58,912 | INFO     | [data] copytool_out thread has finished
[2025-12-02 11:59:26] 2025-12-02 16:58:58,984 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 11:59:26] 2025-12-02 16:58:59,032 | INFO     | [data] copytool_in thread has finished
[2025-12-02 11:59:26] 2025-12-02 16:58:59,110 | INFO     | [job] validate thread has finished
[2025-12-02 11:59:26] 2025-12-02 16:58:59,183 | INFO     | [payload] control thread has finished
[2025-12-02 11:59:26] 2025-12-02 16:58:59,230 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 11:59:26] 2025-12-02 16:58:59,690 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 11:59:26] 2025-12-02 16:59:00,695 | INFO     | [job] queue monitor thread has finished
[2025-12-02 11:59:26] 2025-12-02 16:59:02,991 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 11:59:26] 2025-12-02 16:59:06,997 | INFO     | [monitor] cgroup control has ended
[2025-12-02 11:59:26] 2025-12-02 16:59:07,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139994011572032)>', '<ExcThread(monitor, started 139993418807040)>']
[2025-12-02 11:59:26] 2025-12-02 16:59:12,833 | INFO     | all workflow threads have been joined
[2025-12-02 11:59:26] 2025-12-02 16:59:12,833 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 11:59:26] 2025-12-02 16:59:12,834 | INFO     | traces error code: 0
[2025-12-02 11:59:26] 2025-12-02 16:59:12,834 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 11:59:26] 2025-12-02 16:59:26,374 | INFO     | PID=14852 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-02 11:59:26] 2025-12-02 16:59:26,374 | INFO     | .. there are 3 such processes running
[2025-12-02 11:59:26] 2025-12-02 16:59:26,375 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 11:59:26] 2025-12-02 16:59:26,375 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 11:59:26] 2025-12-02 16:59:26,375 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 11:59:26] 2025-12-02 16:59:26,375 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 11:59:26] 2025-12-02 16:59:26,375 | INFO     | [monitor] control thread has ended
[2025-12-02 11:59:26] 2025-12-02 16:59:26,488 [wrapper] ==== pilot stdout END ====
[2025-12-02 11:59:26] 2025-12-02 16:59:26,490 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 11:59:26] 2025-12-02 16:59:26,493 [wrapper] pilotpid: 14852
[2025-12-02 11:59:26] 2025-12-02 16:59:26,495 [wrapper] Pilot exit status: 0
[2025-12-02 11:59:26] 2025-12-02 16:59:26,503 [wrapper] pandaids: 6895325340
[2025-12-02 11:59:26] 2025-12-02 16:59:26,542 [wrapper] cleanup supervisor_pilot 26136 14853
[2025-12-02 11:59:26] 2025-12-02 16:59:26,545 [wrapper] Test setup, not cleaning
[2025-12-02 11:59:26] 2025-12-02 16:59:26,547 [wrapper] apfmon messages muted
[2025-12-02 11:59:26] 2025-12-02 16:59:26,568 [wrapper] ==== wrapper stdout END ====
[2025-12-02 11:59:26] 2025-12-02 16:59:26,570 [wrapper] ==== wrapper stderr END ====
[2025-12-02 11:59:26]  *** Error codes and diagnostics ***
[2025-12-02 11:59:26]     "exeErrorCode": 0,
[2025-12-02 11:59:26]     "exeErrorDiag": "",
[2025-12-02 11:59:26]     "pilotErrorCode": 0,
[2025-12-02 11:59:26]     "pilotErrorDiag": "",
[2025-12-02 11:59:26]  *** Listing of results directory ***
[2025-12-02 11:59:26] total 1323660
[2025-12-02 11:59:26] -rwx------ 1 boincer umatlas     36292 Nov 21 09:45 runpilot2-wrapper.sh
[2025-12-02 11:59:26] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 09:45 pilot3.tar.gz
[2025-12-02 11:59:26] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 09:45 queuedata.json
[2025-12-02 11:59:26] -rw-r--r-- 1 boincer umatlas       100 Dec  1 16:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 11:59:26] -rwxr-xr-x 1 boincer umatlas      7986 Dec  1 16:30 run_atlas
[2025-12-02 11:59:26] -rw-r--r-- 1 boincer umatlas       105 Dec  1 16:30 job.xml
[2025-12-02 11:59:26] -rw-r--r-- 2 boincer umatlas 407997339 Dec  1 16:30 EVNT.47483658._000034.pool.root.1
[2025-12-02 11:59:26] -rw-r--r-- 2 boincer umatlas    590094 Dec  1 16:30 input.tar.gz
[2025-12-02 11:59:26] -rw-r--r-- 2 boincer umatlas     15847 Dec  1 16:30 start_atlas.sh
[2025-12-02 11:59:26] drwxrwx--x 2 boincer umatlas      4096 Dec  1 16:30 shared
[2025-12-02 11:59:26] -rw-r--r-- 1 boincer umatlas         0 Dec  1 16:30 boinc_lockfile
[2025-12-02 11:59:26] -rw-r--r-- 1 boincer umatlas      2784 Dec  1 16:30 pandaJob.out
[2025-12-02 11:59:26] -rw------- 1 boincer umatlas        57 Dec  1 16:31 setup.sh.local
[2025-12-02 11:59:26] -rw------- 1 boincer umatlas    992004 Dec  1 16:31 agis_schedconf.cvmfs.json
[2025-12-02 11:59:26] drwx------ 5 boincer umatlas      4096 Dec  1 16:31 pilot3
[2025-12-02 11:59:26] -rw-r--r-- 1 boincer umatlas       533 Dec  2 11:45 boinc_task_state.xml
[2025-12-02 11:59:26] -rw-r--r-- 1 boincer umatlas      5954 Dec  2 11:57 init_data.xml
[2025-12-02 11:59:26] -rw------- 1 boincer umatlas 919476867 Dec  2 11:58 HITS.47556137._000332.pool.root.1
[2025-12-02 11:59:26] -rw------- 1 boincer umatlas      1067 Dec  2 11:58 memory_monitor_summary.json
[2025-12-02 11:59:26] -rw------- 1 boincer umatlas   1516240 Dec  2 11:58 agis_ddmendpoints.agis.ALL.json
[2025-12-02 11:59:26] -rw------- 1 boincer umatlas   2313118 Dec  2 11:58 log.47556137._000332.job.log.tgz.1
[2025-12-02 11:59:26] -rw------- 1 boincer umatlas      8677 Dec  2 11:58 heartbeat.json
[2025-12-02 11:59:26] -rw-r--r-- 1 boincer umatlas      8192 Dec  2 11:59 boinc_mmap_file
[2025-12-02 11:59:26] -rw-r--r-- 1 boincer umatlas        29 Dec  2 11:59 wrapper_checkpoint.txt
[2025-12-02 11:59:26] -rw------- 1 boincer umatlas       820 Dec  2 11:59 pilotlog.txt
[2025-12-02 11:59:26] -rw------- 1 boincer umatlas        95 Dec  2 11:59 pilot_heartbeat.json
[2025-12-02 11:59:26] -rw------- 1 boincer umatlas   9705988 Dec  2 11:59 log.47556137._000332.job.log.1
[2025-12-02 11:59:26] -rw------- 1 boincer umatlas       353 Dec  2 11:59 output.list
[2025-12-02 11:59:26] -rw-r--r-- 1 boincer umatlas       620 Dec  2 11:59 runtime_log
[2025-12-02 11:59:26] -rw------- 1 boincer umatlas  12042240 Dec  2 11:59 result.tar.gz
[2025-12-02 11:59:26] -rw-r--r-- 1 boincer umatlas      9343 Dec  2 11:59 runtime_log.err
[2025-12-02 11:59:26] -rw------- 1 boincer umatlas       668 Dec  2 11:59 hBNKDmBZhg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLgHKDm1QstVn.diag
[2025-12-02 11:59:26] -rw-r--r-- 1 boincer umatlas     21313 Dec  2 11:59 stderr.txt
[2025-12-02 11:59:26] HITS file was successfully produced:
[2025-12-02 11:59:26] -rw------- 1 boincer umatlas 919476867 Dec  2 11:58 shared/HITS.pool.root.1
[2025-12-02 11:59:26]  *** Contents of shared directory: ***
[2025-12-02 11:59:26] total 1308724
[2025-12-02 11:59:26] -rw-r--r-- 2 boincer umatlas 407997339 Dec  1 16:30 ATLAS.root_0
[2025-12-02 11:59:26] -rw-r--r-- 2 boincer umatlas    590094 Dec  1 16:30 input.tar.gz
[2025-12-02 11:59:26] -rw-r--r-- 2 boincer umatlas     15847 Dec  1 16:30 start_atlas.sh
[2025-12-02 11:59:26] -rw------- 1 boincer umatlas 919476867 Dec  2 11:58 HITS.pool.root.1
[2025-12-02 11:59:26] -rw------- 1 boincer umatlas  12042240 Dec  2 11:59 result.tar.gz
11:59:28 (11124): run_atlas exited; CPU time 544673.434048
11:59:28 (11124): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN