Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-02 18:30:17 (1006105): vboxwrapper version 26210
2025-12-02 18:30:17 (1006105): BOINC client version: 8.2.8
2025-12-02 18:30:17 (1006105): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2025-12-02 18:30:17 (1006105): Successfully copied 'init_data.xml' to the shared directory.
2025-12-02 18:30:17 (1006105): Create VM. (boinc_5ba9d45d4aff3829, slot#2)
2025-12-02 18:30:17 (1006105): Setting Memory Size for VM. (4400MB)
2025-12-02 18:30:17 (1006105): Setting CPU Count for VM. (4)
2025-12-02 18:30:18 (1006105): Setting Chipset Options for VM.
2025-12-02 18:30:18 (1006105): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-02 18:30:18 (1006105): Setting Boot Options for VM.
2025-12-02 18:30:18 (1006105): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-02 18:30:18 (1006105): Enabling VM Network Access.
2025-12-02 18:30:18 (1006105): Disabling USB Support for VM.
2025-12-02 18:30:18 (1006105): Disabling COM Port Support for VM.
2025-12-02 18:30:18 (1006105): Disabling LPT Port Support for VM.
2025-12-02 18:30:18 (1006105): Disabling Audio Support for VM.
2025-12-02 18:30:18 (1006105): Disabling Clipboard Support for VM.
2025-12-02 18:30:18 (1006105): Disabling Drag and Drop Support for VM.
2025-12-02 18:30:18 (1006105): Adding storage controller(s) to VM.
2025-12-02 18:30:18 (1006105): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-02 18:30:19 (1006105): Adding VirtualBox Guest Additions to VM.
2025-12-02 18:30:19 (1006105): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-02 18:30:19 (1006105): forwarding host port 35359 to guest port 80
2025-12-02 18:30:19 (1006105): Enabling remote desktop for VM.
2025-12-02 18:30:19 (1006105): Enabling shared directory for VM.
2025-12-02 18:30:20 (1006105): Starting VM using VBoxManage interface. (boinc_5ba9d45d4aff3829, slot#2)
2025-12-02 18:30:21 (1006105): Successfully started VM. (PID = '1006716')
2025-12-02 18:30:21 (1006105): Reporting VM Process ID to BOINC.
2025-12-02 18:30:21 (1006105): Guest Log: BIOS: VirtualBox 7.2.4
2025-12-02 18:30:21 (1006105): Guest Log: CPUID EDX: 0x178bfbff
2025-12-02 18:30:21 (1006105): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-02 18:30:21 (1006105): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-02 18:30:21 (1006105): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-02 18:30:21 (1006105): Detected: Web Application Enabled (http://localhost:35359)
2025-12-02 18:30:21 (1006105): Detected: Remote Desktop Enabled (localhost:46025)
2025-12-02 18:30:21 (1006105): Preference change detected
2025-12-02 18:30:21 (1006105): Setting CPU throttle for VM. (100%)
2025-12-02 18:30:21 (1006105): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-02 18:30:23 (1006105): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-02 18:30:23 (1006105): Guest Log: BIOS: Booting from Hard Disk...
2025-12-02 18:30:26 (1006105): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-02 18:30:26 (1006105): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-02 18:30:26 (1006105): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-02 18:30:33 (1006105): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-02 18:30:33 (1006105): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-12-02 18:30:39 (1006105): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-02 18:30:39 (1006105): Guest Log: 00:00:00.000186 main     Log opened 2025-12-02T17:30:37.609073000Z
2025-12-02 18:30:39 (1006105): Guest Log: 00:00:00.000305 main     OS Product: Linux
2025-12-02 18:30:39 (1006105): Guest Log: 00:00:00.000342 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-02 18:30:39 (1006105): Guest Log: 00:00:00.000391 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-02 18:30:39 (1006105): Guest Log: 00:00:00.000423 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-02 18:30:39 (1006105): Guest Log: 00:00:00.000423 main     Process ID: 1317
2025-12-02 18:30:39 (1006105): Guest Log: 00:00:00.000424 main     Package type: LINUX_64BITS_GENERIC
2025-12-02 18:30:39 (1006105): Guest Log: 00:00:00.001539 main     5.2.32 r132073 started. Verbose level = 0
2025-12-02 18:30:39 (1006105): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-02 18:30:39 (1006105): Guest Log: [INFO] Mounting shared directory
2025-12-02 18:30:39 (1006105): Guest Log: [INFO] Checking for init_data.xml
2025-12-02 18:30:57 (1006105): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-02 18:30:57 (1006105): Guest Log: [INFO] Detected branch: prod
2025-12-02 18:30:59 (1006105): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-02 18:30:59 (1006105): Guest Log: Copying input files
2025-12-02 18:31:00 (1006105): Guest Log: Copied input files into RunAtlas.
2025-12-02 18:31:00 (1006105): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-12-02 18:31:00 (1006105): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-12-02 18:31:00 (1006105): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-12-02 18:31:00 (1006105): Guest Log: Further information can be found at the LHC@home message board.
2025-12-02 18:31:18 (1006105): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-02 18:31:20 (1006105): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-02 18:31:20 (1006105): Guest Log: 2.6.3.0 1599 0 30140 153564 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-12-02 18:31:21 (1006105): Guest Log: copied the webapp to /var/www
2025-12-02 18:31:21 (1006105): Guest Log: ATHENA_PROC_NUMBER=4
2025-12-02 18:31:21 (1006105): Guest Log: ATHENA_CORE_NUMBER=4
2025-12-02 18:31:23 (1006105): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-02 18:31:23 (1006105): Guest Log:  *** Starting ATLAS job. (PandaID=6905332498 taskID=47530725) ***
2025-12-02 20:09:22 (1006105): Status Report: Elapsed Time: '6000.000000'
2025-12-02 20:09:22 (1006105): Status Report: CPU Time: '21521.240000'
2025-12-02 21:48:23 (1006105): Status Report: Elapsed Time: '12000.000000'
2025-12-02 21:48:23 (1006105): Status Report: CPU Time: '43363.790000'
2025-12-02 23:27:25 (1006105): Status Report: Elapsed Time: '18000.000000'
2025-12-02 23:27:25 (1006105): Status Report: CPU Time: '65350.690000'
2025-12-03 01:06:26 (1006105): Status Report: Elapsed Time: '24000.000000'
2025-12-03 01:06:26 (1006105): Status Report: CPU Time: '87351.210000'
2025-12-03 02:45:27 (1006105): Status Report: Elapsed Time: '30000.000000'
2025-12-03 02:45:27 (1006105): Status Report: CPU Time: '109324.550000'
2025-12-03 04:24:29 (1006105): Status Report: Elapsed Time: '36000.000000'
2025-12-03 04:24:29 (1006105): Status Report: CPU Time: '131334.740000'
2025-12-03 06:03:30 (1006105): Status Report: Elapsed Time: '42000.000000'
2025-12-03 06:03:30 (1006105): Status Report: CPU Time: '153291.500000'
2025-12-03 07:42:31 (1006105): Status Report: Elapsed Time: '48000.000000'
2025-12-03 07:42:31 (1006105): Status Report: CPU Time: '175943.050000'
2025-12-03 09:21:32 (1006105): Status Report: Elapsed Time: '54000.000000'
2025-12-03 09:21:32 (1006105): Status Report: CPU Time: '198821.000000'
2025-12-03 11:00:33 (1006105): Status Report: Elapsed Time: '60000.000000'
2025-12-03 11:00:33 (1006105): Status Report: CPU Time: '221707.000000'
2025-12-03 12:39:34 (1006105): Status Report: Elapsed Time: '66000.000000'
2025-12-03 12:39:34 (1006105): Status Report: CPU Time: '244437.450000'
2025-12-03 14:18:35 (1006105): Status Report: Elapsed Time: '72000.000000'
2025-12-03 14:18:35 (1006105): Status Report: CPU Time: '267292.650000'
2025-12-03 15:57:36 (1006105): Status Report: Elapsed Time: '78000.000000'
2025-12-03 15:57:36 (1006105): Status Report: CPU Time: '290126.920000'
2025-12-03 16:08:07 (1006105): Guest Log:  *** Job finished ***
2025-12-03 16:08:07 (1006105): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-03 16:08:07 (1006105): Guest Log: 2025-12-03 15:07:52,493 | INFO     | [job] control thread has finished
2025-12-03 16:08:07 (1006105): Guest Log: 2025-12-03 15:07:53,779 | INFO     | [data] queue_monitor thread has finished
2025-12-03 16:08:07 (1006105): Guest Log: 2025-12-03 15:08:00,550 | INFO     | [monitor] cgroup control has ended
2025-12-03 16:08:07 (1006105): Guest Log: 2025-12-03 15:08:01,097 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140374782854976)>', '<ExcThread(monitor, started 140374177715968)>']
2025-12-03 16:08:07 (1006105): Guest Log: 2025-12-03 15:08:01,788 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-03 16:08:07 (1006105): Guest Log: 2025-12-03 15:08:01,788 | INFO     | [monitor] control thread has ended
2025-12-03 16:08:07 (1006105): Guest Log: 2025-12-03 15:08:06,192 | INFO     | all workflow threads have been joined
2025-12-03 16:08:07 (1006105): Guest Log: 2025-12-03 15:08:06,192 | INFO     | end of generic workflow (traces error code: 0)
2025-12-03 16:08:07 (1006105): Guest Log: 2025-12-03 15:08:06,192 | INFO     | traces error code: 0
2025-12-03 16:08:07 (1006105): Guest Log: 2025-12-03 15:08:06,193 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-03 16:08:07 (1006105): Guest Log: 2025-12-03 15:08:06,294 [wrapper] ==== pilot stdout END ====
2025-12-03 16:08:07 (1006105): Guest Log: 2025-12-03 15:08:06,300 [wrapper] ==== wrapper stdout RESUME ====
2025-12-03 16:08:07 (1006105): Guest Log: 2025-12-03 15:08:06,305 [wrapper] pilotpid: 6023
2025-12-03 16:08:07 (1006105): Guest Log: 2025-12-03 15:08:06,311 [wrapper] Pilot exit status: 0
2025-12-03 16:08:07 (1006105): Guest Log: 2025-12-03 15:08:06,337 [wrapper] pandaids: 6905332498
2025-12-03 16:08:07 (1006105): Guest Log: 2025-12-03 15:08:06,378 [wrapper] cleanup supervisor_pilot 17424 6024
2025-12-03 16:08:07 (1006105): Guest Log: 2025-12-03 15:08:06,385 [wrapper] Test setup, not cleaning
2025-12-03 16:08:07 (1006105): Guest Log: 2025-12-03 15:08:06,391 [wrapper] apfmon messages muted
2025-12-03 16:08:07 (1006105): Guest Log: 2025-12-03 15:08:06,398 [wrapper] ==== wrapper stdout END ====
2025-12-03 16:08:07 (1006105): Guest Log: 2025-12-03 15:08:06,404 [wrapper] ==== wrapper stderr END ====
2025-12-03 16:08:07 (1006105): Guest Log:  *** Error codes and diagnostics ***
2025-12-03 16:08:07 (1006105): Guest Log:     "exeErrorCode": 0,
2025-12-03 16:08:07 (1006105): Guest Log:     "exeErrorDiag": "",
2025-12-03 16:08:07 (1006105): Guest Log:     "pilotErrorCode": 0,
2025-12-03 16:08:07 (1006105): Guest Log:     "pilotErrorDiag": "",
2025-12-03 16:08:07 (1006105): Guest Log:  *** Listing of results directory ***
2025-12-03 16:08:07 (1006105): Guest Log: total 716668
2025-12-03 16:08:07 (1006105): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 30 00:16 pilot3.tar.gz
2025-12-03 16:08:07 (1006105): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 30 00:18 runpilot2-wrapper.sh
2025-12-03 16:08:07 (1006105): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 30 00:18 queuedata.json
2025-12-03 16:08:07 (1006105): Guest Log: -rw-r--r--. 1 atlas atlas    590129 Dec  2 17:30 input.tar.gz
2025-12-03 16:08:07 (1006105): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Dec  2 17:30 start_atlas.sh
2025-12-03 16:08:07 (1006105): Guest Log: -rw-r--r--. 1 atlas atlas      8870 Dec  2 17:30 init_data.xml
2025-12-03 16:08:07 (1006105): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec  2 17:30 EVNT.47530720._000059.pool.root.1 -> /data/./ATLAS.root_0
2025-12-03 16:08:07 (1006105): Guest Log: -rw-r--r--. 1 atlas atlas      2878 Dec  2 17:31 pandaJob.out
2025-12-03 16:08:07 (1006105): Guest Log: -rw-------. 1 atlas atlas    988858 Dec  2 17:33 agis_schedconf.cvmfs.json
2025-12-03 16:08:07 (1006105): Guest Log: drwx------. 5 atlas atlas      4096 Dec  2 17:33 pilot3
2025-12-03 16:08:07 (1006105): Guest Log: -rw-------. 1 atlas atlas 705977420 Dec  3 15:07 HITS.47530725._001989.pool.root.1
2025-12-03 16:08:07 (1006105): Guest Log: -rw-------. 1 atlas atlas        95 Dec  3 15:07 pilot_heartbeat.json
2025-12-03 16:08:07 (1006105): Guest Log: -rw-------. 1 atlas atlas      1037 Dec  3 15:07 memory_monitor_summary.json
2025-12-03 16:08:07 (1006105): Guest Log: -rw-------. 1 atlas atlas   1516240 Dec  3 15:07 agis_ddmendpoints.agis.ALL.json
2025-12-03 16:08:07 (1006105): Guest Log: -rw-------. 1 atlas atlas   1977680 Dec  3 15:07 log.47530725._001989.job.log.tgz.1
2025-12-03 16:08:07 (1006105): Guest Log: -rw-------. 1 atlas atlas     27774 Dec  3 15:07 heartbeat.json
2025-12-03 16:08:07 (1006105): Guest Log: -rw-------. 1 atlas atlas      4612 Dec  3 15:08 pilotlog.txt
2025-12-03 16:08:07 (1006105): Guest Log: -rw-------. 1 atlas atlas  10027098 Dec  3 15:08 log.47530725._001989.job.log.1
2025-12-03 16:08:07 (1006105): Guest Log: -rw-------. 1 atlas atlas       353 Dec  3 15:08 output.list
2025-12-03 16:08:07 (1006105): Guest Log: -rw-r--r--. 1 atlas atlas       620 Dec  3 15:08 runtime_log
2025-12-03 16:08:07 (1006105): Guest Log: -rw-------. 1 atlas atlas  12042240 Dec  3 15:08 result.tar.gz
2025-12-03 16:08:07 (1006105): Guest Log: -rw-r--r--. 1 atlas atlas      8750 Dec  3 15:08 runtime_log.err
2025-12-03 16:08:07 (1006105): Guest Log: -rw-------. 1 atlas atlas       664 Dec  3 15:08 fJ6NDmxJkj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6zLKDmXofcnm.diag
2025-12-03 16:08:07 (1006105): Guest Log: Looking for outputfile HITS.47530725._001989.pool.root.1
2025-12-03 16:08:07 (1006105): Guest Log: HITS file was successfully produced
2025-12-03 16:08:07 (1006105): Guest Log: -rw-------. 1 atlas atlas 705977420 Dec  3 15:07 /home/atlas/RunAtlas/HITS.47530725._001989.pool.root.1
2025-12-03 16:08:07 (1006105): Guest Log: Successfully finished the ATLAS job!
2025-12-03 16:08:07 (1006105): Guest Log: Copying the results back to the shared directory!
2025-12-03 16:08:07 (1006105): Guest Log:  *** Contents of shared directory: ***
2025-12-03 16:08:07 (1006105): Guest Log: total 380200
2025-12-03 16:08:07 (1006105): Guest Log: -rw-r--r--. 1 root root 376654682 Dec  2 17:30 ATLAS.root_0
2025-12-03 16:08:07 (1006105): Guest Log: -rw-r--r--. 1 root root      8870 Dec  2 17:30 init_data.xml
2025-12-03 16:08:07 (1006105): Guest Log: -rw-r--r--. 1 root root    590129 Dec  2 17:30 input.tar.gz
2025-12-03 16:08:07 (1006105): Guest Log: -rw-r--r--. 1 root root  12042240 Dec  3 15:08 result.tar.gz
2025-12-03 16:08:07 (1006105): Guest Log: -rw-r--r--. 1 root root     15847 Dec  2 17:30 start_atlas.sh
2025-12-03 16:08:07 (1006105): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-03 16:08:07 (1006105): VM Completion File Detected.
2025-12-03 16:08:07 (1006105): Powering off VM.
2025-12-03 16:08:07 (1006105): Successfully stopped VM.
2025-12-03 16:08:07 (1006105): Deregistering VM. (boinc_5ba9d45d4aff3829, slot#2)
2025-12-03 16:08:07 (1006105): Removing network bandwidth throttle group from VM.
2025-12-03 16:08:08 (1006105): Removing VM from VirtualBox.
2025-12-03 16:08:13 (1006105): called boinc_finish(0)

</stderr_txt>
]]>

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