Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:16:12 (4022667): wrapper (7.7.26015): starting
11:16:12 (4022667): wrapper: running run_atlas (--nthreads 4)
[2025-12-05 11:16:12] Arguments: --nthreads 4
[2025-12-05 11:16:12] Threads: 4
[2025-12-05 11:16:12] Checking for CVMFS
[2025-12-05 11:16:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-05 11:16:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-05 11:16:13] Running cvmfs_config stat atlas.cern.ch
[2025-12-05 11:16:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-05 11:16:13] 2.9.2.0 64599 24671 105332 153648 3 9 35844049 36864001 0 130560 0 9754428 99.962 1012264 1281 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-05 11:16:13] CVMFS is ok
[2025-12-05 11:16:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-05 11:16:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-05 11:16:13] Further information can be found at the LHC@home message board.
[2025-12-05 11:16:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-05 11:16:13] Checking for apptainer binary...
[2025-12-05 11:16:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-05 11:16:13] Running /usr/bin/apptainer --version
[2025-12-05 11:16:13] apptainer version 1.4.1-1.1
[2025-12-05 11:16:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-05 11:16:13] thA314
[2025-12-05 11:16:13] apptainer works
[2025-12-05 11:16:13] Set ATHENA_PROC_NUMBER=4
[2025-12-05 11:16:13] Set ATHENA_CORE_NUMBER=4
[2025-12-05 11:16:13] Starting ATLAS job with PandaID=6905025723
[2025-12-05 11:16:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-05 14:39:42]  *** The last 200 lines of the pilot log: ***
[2025-12-05 14:39:42] 2025-12-05 13:38:52,976 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-05 14:39:42] 2025-12-05 13:38:54,593 | INFO     | time since job start (12153s) is within the limit (172800.0s)
[2025-12-05 14:39:42] 2025-12-05 13:38:55,119 | INFO     | monitor loop #929: job 0:6905025723 is in state 'finished'
[2025-12-05 14:39:42] 2025-12-05 13:38:55,119 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-05 14:39:42] 2025-12-05 13:38:56,598 | INFO     | time since job start (12155s) is within the limit (172800.0s)
[2025-12-05 14:39:42] 2025-12-05 13:38:57,622 | INFO     | monitor loop #930: job 0:6905025723 is in state 'finished'
[2025-12-05 14:39:42] 2025-12-05 13:38:57,622 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-05 14:39:42] 2025-12-05 13:38:57,910 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-05 14:39:42] 2025-12-05 13:38:57,912 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3532.83175
[2025-12-05 14:39:42] 2025-12-05 13:38:57,913 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6905025723/memory_monitor_summary.json (trf name=prmon)
[2025-12-05 14:39:42] 2025-12-05 13:38:57,914 | INFO     | extracted standard info from prmon json
[2025-12-05 14:39:42] 2025-12-05 13:38:57,914 | INFO     | extracted standard memory fields from prmon json
[2025-12-05 14:39:42] 2025-12-05 13:38:57,914 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-05 14:39:42] 2025-12-05 13:38:57,914 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-05 14:39:42] 2025-12-05 13:38:57,914 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-05 14:39:42] 2025-12-05 13:38:57,915 | INFO     | fitting pss+swap vs Time
[2025-12-05 14:39:42] 2025-12-05 13:38:57,916 | INFO     | sum of square deviations: 2443580700.0
[2025-12-05 14:39:42] 2025-12-05 13:38:57,916 | INFO     | sum of deviations: -60329407236.0
[2025-12-05 14:39:42] 2025-12-05 13:38:57,916 | INFO     | mean x: 1764935844.0
[2025-12-05 14:39:42] 2025-12-05 13:38:57,916 | INFO     | mean y: 2511749.8090452263
[2025-12-05 14:39:42] 2025-12-05 13:38:57,916 | INFO     | intersect: 43576899646.26336
[2025-12-05 14:39:42] 2025-12-05 13:38:57,916 | INFO     | chi2: 1.966701820463448
[2025-12-05 14:39:42] 2025-12-05 13:38:57,916 | INFO     | sum of square deviations: 2263977332.5
[2025-12-05 14:39:42] 2025-12-05 13:38:57,917 | INFO     | sum of deviations: -57858596075.0
[2025-12-05 14:39:42] 2025-12-05 13:38:57,917 | INFO     | mean x: 1764935691.5
[2025-12-05 14:39:42] 2025-12-05 13:38:57,917 | INFO     | mean y: 2513848.2577319588
[2025-12-05 14:39:42] 2025-12-05 13:38:57,917 | INFO     | intersect: 45107515478.325645
[2025-12-05 14:39:42] 2025-12-05 13:38:57,917 | INFO     | chi2: 1.958584617847658
[2025-12-05 14:39:42] 2025-12-05 13:38:57,917 | INFO     | current chi2=1.958584617847658 (change=0.41273173855492123 %)
[2025-12-05 14:39:42] 2025-12-05 13:38:57,917 | INFO     | right removable region: 193
[2025-12-05 14:39:42] 2025-12-05 13:38:57,917 | INFO     | sum of square deviations: 2263977332.5
[2025-12-05 14:39:42] 2025-12-05 13:38:57,918 | INFO     | sum of deviations: -89804578871.00009
[2025-12-05 14:39:42] 2025-12-05 13:38:57,918 | INFO     | mean x: 1764935996.5
[2025-12-05 14:39:42] 2025-12-05 13:38:57,918 | INFO     | mean y: 2536456.3711340204
[2025-12-05 14:39:42] 2025-12-05 13:38:57,918 | INFO     | intersect: 70011777107.61401
[2025-12-05 14:39:42] 2025-12-05 13:38:57,918 | INFO     | chi2: 0.39496237438743165
[2025-12-05 14:39:42] 2025-12-05 13:38:57,918 | INFO     | current chi2=0.39496237438743165 (change=79.91752637446791 %)
[2025-12-05 14:39:42] 2025-12-05 13:38:57,918 | INFO     | sum of square deviations: 2093397390.0
[2025-12-05 14:39:42] 2025-12-05 13:38:57,919 | INFO     | sum of deviations: -83408848979.99998
[2025-12-05 14:39:42] 2025-12-05 13:38:57,919 | INFO     | mean x: 1764936149.0
[2025-12-05 14:39:42] 2025-12-05 13:38:57,919 | INFO     | mean y: 2530714.1746031744
[2025-12-05 14:39:42] 2025-12-05 13:38:57,919 | INFO     | intersect: 70324244792.20914
[2025-12-05 14:39:42] 2025-12-05 13:38:57,919 | INFO     | chi2: 0.39118773640173743
[2025-12-05 14:39:42] 2025-12-05 13:38:57,919 | INFO     | current chi2=0.39118773640173743 (change=0.9556955878515027 %)
[2025-12-05 14:39:42] 2025-12-05 13:38:57,919 | INFO     | left removable region: 20
[2025-12-05 14:39:42] 2025-12-05 13:38:57,919 | INFO     | sum of square deviations: 1605470102.0
[2025-12-05 14:39:42] 2025-12-05 13:38:57,919 | INFO     | sum of deviations: -64139484377.0
[2025-12-05 14:39:42] 2025-12-05 13:38:57,919 | INFO     | mean x: 1764936271.0
[2025-12-05 14:39:42] 2025-12-05 13:38:57,920 | INFO     | mean y: 2517624.2369942195
[2025-12-05 14:39:42] 2025-12-05 13:38:57,920 | INFO     | intersect: 70512770190.87442
[2025-12-05 14:39:42] 2025-12-05 13:38:57,920 | INFO     | chi2: 0.3684153201600918
[2025-12-05 14:39:42] 2025-12-05 13:38:57,920 | INFO     | current memory leak: -39.95 B/s (using 173 data points, chi2=0.37)
[2025-12-05 14:39:42] 2025-12-05 13:38:57,920 | INFO     | could have reported an average CPU frequency of 3726 MHz (10 samples)
[2025-12-05 14:39:42] 2025-12-05 13:38:57,920 | INFO     | ..............................
[2025-12-05 14:39:42] 2025-12-05 13:38:57,920 | INFO     | . Timing measurements:
[2025-12-05 14:39:42] 2025-12-05 13:38:57,920 | INFO     | . get job = 0 s
[2025-12-05 14:39:42] 2025-12-05 13:38:57,920 | INFO     | . initial setup = 1 s
[2025-12-05 14:39:42] 2025-12-05 13:38:57,920 | INFO     | . payload setup = 4 s
[2025-12-05 14:39:42] 2025-12-05 13:38:57,920 | INFO     | . stage-in = 0 s
[2025-12-05 14:39:42] 2025-12-05 13:38:57,920 | INFO     | . payload execution = 12123 s
[2025-12-05 14:39:42] 2025-12-05 13:38:57,920 | INFO     | . stage-out = 0 s
[2025-12-05 14:39:42] 2025-12-05 13:38:57,920 | INFO     | . log creation = 0 s
[2025-12-05 14:39:42] 2025-12-05 13:38:57,920 | INFO     | ..............................
[2025-12-05 14:39:42] 2025-12-05 13:38:58,211 | INFO     | 
[2025-12-05 14:39:42] 2025-12-05 13:38:58,211 | INFO     | job summary report
[2025-12-05 14:39:42] 2025-12-05 13:38:58,211 | INFO     | --------------------------------------------------
[2025-12-05 14:39:42] 2025-12-05 13:38:58,211 | INFO     | PanDA job id: 6905025723
[2025-12-05 14:39:42] 2025-12-05 13:38:58,211 | INFO     | task id: 47523969
[2025-12-05 14:39:42] 2025-12-05 13:38:58,211 | INFO     | errors: (none)
[2025-12-05 14:39:42] 2025-12-05 13:38:58,211 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-05 14:39:42] 2025-12-05 13:38:58,211 | INFO     | pilot state: finished 
[2025-12-05 14:39:42] 2025-12-05 13:38:58,211 | INFO     | transexitcode: 0
[2025-12-05 14:39:42] 2025-12-05 13:38:58,212 | INFO     | exeerrorcode: 0
[2025-12-05 14:39:42] 2025-12-05 13:38:58,212 | INFO     | exeerrordiag: 
[2025-12-05 14:39:42] 2025-12-05 13:38:58,212 | INFO     | exitcode: 0
[2025-12-05 14:39:42] 2025-12-05 13:38:58,212 | INFO     | exitmsg: OK
[2025-12-05 14:39:42] 2025-12-05 13:38:58,212 | INFO     | cpuconsumptiontime: 47259 s
[2025-12-05 14:39:42] 2025-12-05 13:38:58,212 | INFO     | nevents: 400
[2025-12-05 14:39:42] 2025-12-05 13:38:58,212 | INFO     | neventsw: 0
[2025-12-05 14:39:42] 2025-12-05 13:38:58,212 | INFO     | pid: 4033047
[2025-12-05 14:39:42] 2025-12-05 13:38:58,212 | INFO     | pgrp: 4033047
[2025-12-05 14:39:42] 2025-12-05 13:38:58,212 | INFO     | corecount: 4
[2025-12-05 14:39:42] 2025-12-05 13:38:58,212 | INFO     | event service: False
[2025-12-05 14:39:42] 2025-12-05 13:38:58,212 | INFO     | sizes: {0: 2283898, 3: 2284160, 10: 2284188, 12131: 2314209, 12132: 2314208, 12134: 2323268, 12137: 2323452, 12142: 2323646}
[2025-12-05 14:39:42] 2025-12-05 13:38:58,212 | INFO     | --------------------------------------------------
[2025-12-05 14:39:42] 2025-12-05 13:38:58,212 | INFO     | 
[2025-12-05 14:39:42] 2025-12-05 13:38:58,212 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-05 14:39:42] 2025-12-05 13:38:58,233 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-05 14:39:42] 2025-12-05 13:38:58,234 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-05 14:39:42] 2025-12-05 13:38:58,234 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-05 14:39:42] 2025-12-05 13:38:58,234 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-05 14:39:42] 2025-12-05 13:38:58,234 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-05 14:39:42] 2025-12-05 13:38:58,234 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-05 14:39:42] 2025-12-05 13:38:58,234 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-05 14:39:42] 2025-12-05 13:38:58,234 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-05 14:39:42] 2025-12-05 13:38:58,234 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-05 14:39:42] 2025-12-05 13:38:58,234 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-05 14:39:42] 2025-12-05 13:38:58,234 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-05 14:39:42] 2025-12-05 13:38:58,234 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-05 14:39:42] 2025-12-05 13:38:58,234 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-05 14:39:42] 2025-12-05 13:38:58,234 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-05 14:39:42] 2025-12-05 13:38:58,234 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-05 14:39:42] 2025-12-05 13:38:58,234 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-05 14:39:42] 2025-12-05 13:38:58,234 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-05 14:39:42] 2025-12-05 13:38:58,234 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-05 14:39:42] 2025-12-05 13:38:58,234 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-05 14:39:42] 2025-12-05 13:38:58,234 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-05 14:39:42] 2025-12-05 13:38:58,235 | INFO     | job 6905025723 has completed (purged errors)
[2025-12-05 14:39:42] 2025-12-05 13:38:58,235 | INFO     | overall cleanup function is called
[2025-12-05 14:39:42] 2025-12-05 13:38:59,241 | INFO     | --- collectZombieJob: --- 10, [4033047]
[2025-12-05 14:39:42] 2025-12-05 13:38:59,242 | INFO     | zombie collector waiting for pid 4033047
[2025-12-05 14:39:42] 2025-12-05 13:38:59,242 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-05 14:39:42] 2025-12-05 13:38:59,242 | INFO     | collected zombie processes
[2025-12-05 14:39:42] 2025-12-05 13:38:59,242 | INFO     | will attempt to kill all subprocesses of pid=4033047
[2025-12-05 14:39:42] 2025-12-05 13:38:59,296 | INFO     | process IDs to be killed: [4033047] (in reverse order)
[2025-12-05 14:39:42] 2025-12-05 13:38:59,333 | WARNING  | found no corresponding commands to process id(s)
[2025-12-05 14:39:42] 2025-12-05 13:38:59,333 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-05 14:39:42] 2025-12-05 13:38:59,336 | INFO     | did not find any defunct processes belonging to 4033047
[2025-12-05 14:39:42] 2025-12-05 13:38:59,338 | INFO     | did not find any defunct processes belonging to 4033047
[2025-12-05 14:39:42] 2025-12-05 13:38:59,338 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-05 14:39:42] 2025-12-05 13:38:59,338 | INFO     | ready for new job
[2025-12-05 14:39:42] 2025-12-05 13:38:59,338 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-05 14:39:42] 2025-12-05 13:38:59,339 | INFO     | ***************************************
[2025-12-05 14:39:42] 2025-12-05 13:38:59,339 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-05 14:39:42] 2025-12-05 13:38:59,340 | INFO     | ***************************************
[2025-12-05 14:39:42] 2025-12-05 13:38:59,340 | INFO     | 
[2025-12-05 14:39:42] 2025-12-05 13:38:59,340 | INFO     | architecture information:
[2025-12-05 14:39:42] 2025-12-05 13:38:59,340 | INFO     | executing command: cat /etc/os-release
[2025-12-05 14:39:42] 2025-12-05 13:38:59,356 | INFO     | cat /etc/os-release:
[2025-12-05 14:39:42] NAME="CentOS Linux"
[2025-12-05 14:39:42] VERSION="7 (Core)"
[2025-12-05 14:39:42] ID="centos"
[2025-12-05 14:39:42] ID_LIKE="rhel fedora"
[2025-12-05 14:39:42] VERSION_ID="7"
[2025-12-05 14:39:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-05 14:39:42] ANSI_COLOR="0;31"
[2025-12-05 14:39:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-05 14:39:42] HOME_URL="https://www.centos.org/"
[2025-12-05 14:39:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-05 14:39:42] 
[2025-12-05 14:39:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-05 14:39:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-05 14:39:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-05 14:39:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-05 14:39:42] 
[2025-12-05 14:39:42] 2025-12-05 13:38:59,356 | INFO     | ***************************************
[2025-12-05 14:39:42] 2025-12-05 13:38:59,859 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-05 14:39:42] 2025-12-05 13:38:59,878 | INFO     | sufficient remaining disk space (223743049728 B)
[2025-12-05 14:39:42] 2025-12-05 13:38:59,878 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-05 14:39:42] 2025-12-05 13:38:59,879 | INFO     | current server update state: UPDATING_FINAL
[2025-12-05 14:39:42] 2025-12-05 13:38:59,879 | INFO     | update_server=False
[2025-12-05 14:39:42] 2025-12-05 13:38:59,879 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-05 14:39:42] 2025-12-05 13:38:59,879 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-05 14:39:42] 2025-12-05 13:38:59,879 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-05 14:39:42] 2025-12-05 13:38:59,955 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-05 14:39:42] 2025-12-05 13:39:00,126 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-05 14:39:42] 2025-12-05 13:39:00,126 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-05 14:39:42] 2025-12-05 13:39:00,126 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-05 14:39:42] 2025-12-05 13:39:00,127 | INFO     | will abort loop
[2025-12-05 14:39:42] 2025-12-05 13:39:00,220 | INFO     | all data control threads have been joined
[2025-12-05 14:39:42] 2025-12-05 13:39:00,422 | INFO     | all job control threads have been joined
[2025-12-05 14:39:42] 2025-12-05 13:39:00,884 | INFO     | [job] retrieve thread has finished
[2025-12-05 14:39:42] 2025-12-05 13:39:00,885 | INFO     | [job] queue monitor thread has finished
[2025-12-05 14:39:42] 2025-12-05 13:39:01,132 | INFO     | [job] job monitor thread has finished
[2025-12-05 14:39:42] 2025-12-05 13:39:01,226 | INFO     | [data] control thread has finished
[2025-12-05 14:39:42] 2025-12-05 13:39:01,338 | INFO     | [payload] validate_post thread has finished
[2025-12-05 14:39:42] 2025-12-05 13:39:01,364 | INFO     | all payload control threads have been joined
[2025-12-05 14:39:42] 2025-12-05 13:39:01,423 | INFO     | [job] control thread has finished
[2025-12-05 14:39:42] 2025-12-05 13:39:01,583 | INFO     | [data] copytool_in thread has finished
[2025-12-05 14:39:42] 2025-12-05 13:39:01,599 | INFO     | [payload] execute_payloads thread has finished
[2025-12-05 14:39:42] 2025-12-05 13:39:01,962 | INFO     | [data] copytool_out thread has finished
[2025-12-05 14:39:42] 2025-12-05 13:39:02,208 | INFO     | [job] validate thread has finished
[2025-12-05 14:39:42] 2025-12-05 13:39:02,257 | INFO     | [job] create_data_payload thread has finished
[2025-12-05 14:39:42] 2025-12-05 13:39:02,273 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-05 14:39:42] 2025-12-05 13:39:02,330 | INFO     | [payload] validate_pre thread has finished
[2025-12-05 14:39:42] 2025-12-05 13:39:02,370 | INFO     | [payload] control thread has finished
[2025-12-05 14:39:42] 2025-12-05 13:39:02,488 | INFO     | [payload] failed_post thread has finished
[2025-12-05 14:39:42] 2025-12-05 13:39:03,886 | INFO     | [data] queue_monitor thread has finished
[2025-12-05 14:39:42] 2025-12-05 13:39:29,730 | INFO     | PID=4026465 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-05 14:39:42] 2025-12-05 13:39:29,730 | INFO     | found 0 job(s) in 20 queues
[2025-12-05 14:39:42] 2025-12-05 13:39:29,730 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-05 14:39:42] 2025-12-05 13:39:29,730 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-05 14:39:42] 2025-12-05 13:39:35,211 | INFO     | [monitor] cgroup control has ended
[2025-12-05 14:39:42] 2025-12-05 13:39:37,057 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140452074018624)>', '<ExcThread(monitor, started 140451445196544)>']
[2025-12-05 14:39:42] 2025-12-05 13:39:37,768 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-05 14:39:42] 2025-12-05 13:39:37,769 | INFO     | [monitor] control thread has ended
[2025-12-05 14:39:42] 2025-12-05 13:39:42,082 | INFO     | all workflow threads have been joined
[2025-12-05 14:39:42] 2025-12-05 13:39:42,083 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-05 14:39:42] 2025-12-05 13:39:42,083 | INFO     | traces error code: 0
[2025-12-05 14:39:42] 2025-12-05 13:39:42,083 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-05 14:39:42] 2025-12-05 13:39:42,167 [wrapper] ==== pilot stdout END ====
[2025-12-05 14:39:42] 2025-12-05 13:39:42,171 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-05 14:39:42] 2025-12-05 13:39:42,175 [wrapper] pilotpid: 4026465
[2025-12-05 14:39:42] 2025-12-05 13:39:42,179 [wrapper] Pilot exit status: 0
[2025-12-05 14:39:42] 2025-12-05 13:39:42,190 [wrapper] pandaids: 6905025723
[2025-12-05 14:39:42] 2025-12-05 13:39:42,216 [wrapper] cleanup supervisor_pilot 4061985 4026466
[2025-12-05 14:39:42] 2025-12-05 13:39:42,220 [wrapper] Test setup, not cleaning
[2025-12-05 14:39:42] 2025-12-05 13:39:42,224 [wrapper] apfmon messages muted
[2025-12-05 14:39:42] 2025-12-05 13:39:42,228 [wrapper] ==== wrapper stdout END ====
[2025-12-05 14:39:42] 2025-12-05 13:39:42,232 [wrapper] ==== wrapper stderr END ====
[2025-12-05 14:39:42]  *** Error codes and diagnostics ***
[2025-12-05 14:39:42]     "exeErrorCode": 0,
[2025-12-05 14:39:42]     "exeErrorDiag": "",
[2025-12-05 14:39:42]     "pilotErrorCode": 0,
[2025-12-05 14:39:42]     "pilotErrorDiag": "",
[2025-12-05 14:39:42]  *** Listing of results directory ***
[2025-12-05 14:39:42] total 629752
[2025-12-05 14:39:42] -rw-r--r-- 1 boinc boinc    576529 Nov 30 01:16 pilot3.tar.gz
[2025-12-05 14:39:42] -rw-r--r-- 1 boinc boinc      5112 Nov 30 01:17 queuedata.json
[2025-12-05 14:39:42] -rwx------ 1 boinc boinc     36292 Nov 30 01:17 runpilot2-wrapper.sh
[2025-12-05 14:39:42] -rw-r--r-- 1 boinc boinc       100 Dec  5 11:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-05 14:39:42] -rwxr-xr-x 1 boinc boinc      7986 Dec  5 11:16 run_atlas
[2025-12-05 14:39:42] -rw-r--r-- 1 boinc boinc       105 Dec  5 11:16 job.xml
[2025-12-05 14:39:42] -rw-r--r-- 2 boinc boinc 294784083 Dec  5 11:16 EVNT.47523965._000010.pool.root.1
[2025-12-05 14:39:42] drwxrwx--x 2 boinc boinc      4096 Dec  5 11:16 shared
[2025-12-05 14:39:42] -rw-r--r-- 2 boinc boinc    589955 Dec  5 11:16 input.tar.gz
[2025-12-05 14:39:42] -rw-r--r-- 2 boinc boinc     15847 Dec  5 11:16 start_atlas.sh
[2025-12-05 14:39:42] -rw-r--r-- 1 boinc boinc         0 Dec  5 11:16 boinc_setup_complete
[2025-12-05 14:39:42] -rw-r--r-- 1 boinc boinc      6378 Dec  5 11:16 init_data.xml
[2025-12-05 14:39:42] -rw-r--r-- 1 boinc boinc         0 Dec  5 11:16 boinc_lockfile
[2025-12-05 14:39:42] -rw-r--r-- 1 boinc boinc      2606 Dec  5 11:16 pandaJob.out
[2025-12-05 14:39:42] -rw------- 1 boinc boinc    985499 Dec  5 11:16 agis_schedconf.cvmfs.json
[2025-12-05 14:39:42] drwx------ 5 boinc boinc      4096 Dec  5 11:16 pilot3
[2025-12-05 14:39:42] -rw------- 1 boinc boinc 342002289 Dec  5 14:38 HITS.47523969._000182.pool.root.1
[2025-12-05 14:39:42] -rw-r--r-- 1 boinc boinc       530 Dec  5 14:38 boinc_task_state.xml
[2025-12-05 14:39:42] -rw------- 1 boinc boinc        95 Dec  5 14:38 pilot_heartbeat.json
[2025-12-05 14:39:42] -rw------- 1 boinc boinc      1022 Dec  5 14:38 memory_monitor_summary.json
[2025-12-05 14:39:42] -rw------- 1 boinc boinc   1516240 Dec  5 14:38 agis_ddmendpoints.agis.ALL.json
[2025-12-05 14:39:42] -rw------- 1 boinc boinc    366086 Dec  5 14:38 log.47523969._000182.job.log.tgz.1
[2025-12-05 14:39:42] -rw------- 1 boinc boinc      7759 Dec  5 14:38 heartbeat.json
[2025-12-05 14:39:42] -rw-r--r-- 1 boinc boinc        28 Dec  5 14:39 wrapper_checkpoint.txt
[2025-12-05 14:39:42] -rw-r--r-- 1 boinc boinc      8192 Dec  5 14:39 boinc_mmap_file
[2025-12-05 14:39:42] -rw------- 1 boinc boinc      4938 Dec  5 14:39 pilotlog.txt
[2025-12-05 14:39:42] -rw------- 1 boinc boinc   1719737 Dec  5 14:39 log.47523969._000182.job.log.1
[2025-12-05 14:39:42] -rw------- 1 boinc boinc       357 Dec  5 14:39 output.list
[2025-12-05 14:39:42] -rw-r--r-- 1 boinc boinc       620 Dec  5 14:39 runtime_log
[2025-12-05 14:39:42] -rw------- 1 boinc boinc   2109440 Dec  5 14:39 result.tar.gz
[2025-12-05 14:39:42] -rw-r--r-- 1 boinc boinc      8898 Dec  5 14:39 runtime_log.err
[2025-12-05 14:39:42] -rw------- 1 boinc boinc       662 Dec  5 14:39 85EODmdJkj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2FPKDm7sCLmn.diag
[2025-12-05 14:39:42] -rw-r--r-- 1 boinc boinc     21521 Dec  5 14:39 stderr.txt
[2025-12-05 14:39:42] HITS file was successfully produced:
[2025-12-05 14:39:42] -rw------- 1 boinc boinc 342002289 Dec  5 14:38 shared/HITS.pool.root.1
[2025-12-05 14:39:42]  *** Contents of shared directory: ***
[2025-12-05 14:39:42] total 624528
[2025-12-05 14:39:42] -rw-r--r-- 2 boinc boinc 294784083 Dec  5 11:16 ATLAS.root_0
[2025-12-05 14:39:42] -rw-r--r-- 2 boinc boinc    589955 Dec  5 11:16 input.tar.gz
[2025-12-05 14:39:42] -rw-r--r-- 2 boinc boinc     15847 Dec  5 11:16 start_atlas.sh
[2025-12-05 14:39:42] -rw------- 1 boinc boinc 342002289 Dec  5 14:38 HITS.pool.root.1
[2025-12-05 14:39:42] -rw------- 1 boinc boinc   2109440 Dec  5 14:39 result.tar.gz
14:39:43 (4022667): run_atlas exited; CPU time 47314.331138
14:39:43 (4022667): called boinc_finish(0)

</stderr_txt>
]]>

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