Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:31:35 (30362): wrapper (7.7.26015): starting
23:31:35 (30362): wrapper: running run_atlas (--nthreads 8)
[2025-12-01 23:31:35] Arguments: --nthreads 8
[2025-12-01 23:31:35] Threads: 8
[2025-12-01 23:31:35] Checking for CVMFS
[2025-12-01 23:31:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 23:31:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 23:31:35] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 23:31:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 23:31:35] 2.11.0.0 4487 73090 105576 153534 0 110 2952885 4096001 6380 130560 0 7437940 99.623 6585764 622 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-12-01 23:31:35] CVMFS is ok
[2025-12-01 23:31:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 23:31:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 23:31:35] Further information can be found at the LHC@home message board.
[2025-12-01 23:31:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 23:31:35] Checking for apptainer binary...
[2025-12-01 23:31:35] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-12-01 23:31:35] apptainer is not installed, using version from CVMFS
[2025-12-01 23:31:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 23:31:35] WARNING: Environment variable TMPDIR already has value [/tmp/job_10941764/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node045
[2025-12-01 23:31:35] apptainer works
[2025-12-01 23:31:35] Set ATHENA_PROC_NUMBER=8
[2025-12-01 23:31:35] Set ATHENA_CORE_NUMBER=8
[2025-12-01 23:31:35] Starting ATLAS job with PandaID=6894267667
[2025-12-01 23:31:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10941764/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 03:58:12]  *** The last 200 lines of the pilot log: ***
[2025-12-02 03:58:12] 2025-12-02 02:57:06,912 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 03:58:12] 2025-12-02 02:57:07,362 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 03:58:12] 2025-12-02 02:57:07,366 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2396.64284375
[2025-12-02 03:58:12] 2025-12-02 02:57:07,383 | INFO     | using path: /tmp/job_10941764/atlas/pilot/slots/0/PanDA_Pilot-6894267667/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 03:58:12] 2025-12-02 02:57:07,383 | INFO     | extracted standard info from prmon json
[2025-12-02 03:58:12] 2025-12-02 02:57:07,383 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 03:58:12] 2025-12-02 02:57:07,383 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 03:58:12] 2025-12-02 02:57:07,386 | INFO     | fitting pss+swap vs Time
[2025-12-02 03:58:12] 2025-12-02 02:57:07,386 | INFO     | sum of square deviations: 5513070810.0
[2025-12-02 03:58:12] 2025-12-02 02:57:07,387 | INFO     | sum of deviations: 112478278383.0
[2025-12-02 03:58:12] 2025-12-02 02:57:07,387 | INFO     | mean x: 1764636247.0
[2025-12-02 03:58:12] 2025-12-02 02:57:07,387 | INFO     | mean y: 2896653.398467433
[2025-12-02 03:58:12] 2025-12-02 02:57:07,387 | INFO     | intersect: -35999406577.45707
[2025-12-02 03:58:12] 2025-12-02 02:57:07,387 | INFO     | chi2: 2.904553221105728
[2025-12-02 03:58:12] 2025-12-02 02:57:07,387 | INFO     | sum of square deviations: 5202255680.0
[2025-12-02 03:58:12] 2025-12-02 02:57:07,388 | INFO     | sum of deviations: 154310523188.0
[2025-12-02 03:58:12] 2025-12-02 02:57:07,388 | INFO     | mean x: 1764636094.5
[2025-12-02 03:58:12] 2025-12-02 02:57:07,388 | INFO     | mean y: 2916967.984375
[2025-12-02 03:58:12] 2025-12-02 02:57:07,388 | INFO     | intersect: -52340131072.80781
[2025-12-02 03:58:12] 2025-12-02 02:57:07,388 | INFO     | chi2: 1.4460402428539862
[2025-12-02 03:58:12] 2025-12-02 02:57:07,389 | INFO     | current chi2=1.4460402428539862 (change=50.21471005088017 %)
[2025-12-02 03:58:12] 2025-12-02 02:57:07,389 | INFO     | sum of square deviations: 4903347750.0
[2025-12-02 03:58:12] 2025-12-02 02:57:07,390 | INFO     | sum of deviations: 147991553622.99997
[2025-12-02 03:58:12] 2025-12-02 02:57:07,390 | INFO     | mean x: 1764635942.0
[2025-12-02 03:58:12] 2025-12-02 02:57:07,390 | INFO     | mean y: 2913744.6015936253
[2025-12-02 03:58:12] 2025-12-02 02:57:07,390 | INFO     | intersect: -53256864666.09058
[2025-12-02 03:58:12] 2025-12-02 02:57:07,390 | INFO     | chi2: 1.4454896914575215
[2025-12-02 03:58:12] 2025-12-02 02:57:07,390 | INFO     | current chi2=1.4454896914575215 (change=0.03807303421778643 %)
[2025-12-02 03:58:12] 2025-12-02 02:57:07,390 | INFO     | right removable region: 250
[2025-12-02 03:58:12] 2025-12-02 02:57:07,390 | INFO     | sum of square deviations: 5202255680.0
[2025-12-02 03:58:12] 2025-12-02 02:57:07,391 | INFO     | sum of deviations: 63352879159.5
[2025-12-02 03:58:12] 2025-12-02 02:57:07,391 | INFO     | mean x: 1764636399.5
[2025-12-02 03:58:12] 2025-12-02 02:57:07,391 | INFO     | mean y: 2920573.76953125
[2025-12-02 03:58:12] 2025-12-02 02:57:07,391 | INFO     | intersect: -21486756876.681858
[2025-12-02 03:58:12] 2025-12-02 02:57:07,391 | INFO     | chi2: 1.5159017633521743
[2025-12-02 03:58:12] 2025-12-02 02:57:07,391 | INFO     | current chi2=1.5159017633521743 (change=47.80946851526139 %)
[2025-12-02 03:58:12] 2025-12-02 02:57:07,392 | INFO     | sum of square deviations: 4903347750.0
[2025-12-02 03:58:12] 2025-12-02 02:57:07,392 | INFO     | sum of deviations: 52146322811.0
[2025-12-02 03:58:12] 2025-12-02 02:57:07,392 | INFO     | mean x: 1764636552.0
[2025-12-02 03:58:12] 2025-12-02 02:57:07,392 | INFO     | mean y: 2926285.123505976
[2025-12-02 03:58:12] 2025-12-02 02:57:07,393 | INFO     | intersect: -18763702552.221752
[2025-12-02 03:58:12] 2025-12-02 02:57:07,393 | INFO     | chi2: 1.4979713714974285
[2025-12-02 03:58:12] 2025-12-02 02:57:07,393 | INFO     | current chi2=1.4979713714974285 (change=1.1828201726670975 %)
[2025-12-02 03:58:12] 2025-12-02 02:57:07,393 | INFO     | left removable region: 20
[2025-12-02 03:58:12] 2025-12-02 02:57:07,393 | INFO     | sum of square deviations: 3772712597.5
[2025-12-02 03:58:12] 2025-12-02 02:57:07,394 | INFO     | sum of deviations: 70920108194.50003
[2025-12-02 03:58:12] 2025-12-02 02:57:07,394 | INFO     | mean x: 1764636521.5
[2025-12-02 03:58:12] 2025-12-02 02:57:07,394 | INFO     | mean y: 2954736.2130434783
[2025-12-02 03:58:12] 2025-12-02 02:57:07,394 | INFO     | intersect: -33168989798.25164
[2025-12-02 03:58:12] 2025-12-02 02:57:07,394 | INFO     | chi2: 0.010065230413792463
[2025-12-02 03:58:12] 2025-12-02 02:57:07,394 | INFO     | current memory leak: 18.80 B/s (using 230 data points, chi2=0.01)
[2025-12-02 03:58:12] 2025-12-02 02:57:07,394 | INFO     | could have reported an average CPU frequency of 3106 MHz (12 samples)
[2025-12-02 03:58:12] 2025-12-02 02:57:07,394 | INFO     | ..............................
[2025-12-02 03:58:12] 2025-12-02 02:57:07,394 | INFO     | . Timing measurements:
[2025-12-02 03:58:12] 2025-12-02 02:57:07,394 | INFO     | . get job = 0 s
[2025-12-02 03:58:12] 2025-12-02 02:57:07,394 | INFO     | . initial setup = 1 s
[2025-12-02 03:58:12] 2025-12-02 02:57:07,394 | INFO     | . payload setup = 2 s
[2025-12-02 03:58:12] 2025-12-02 02:57:07,395 | INFO     | . stage-in = 0 s
[2025-12-02 03:58:12] 2025-12-02 02:57:07,395 | INFO     | . payload execution = 15905 s
[2025-12-02 03:58:12] 2025-12-02 02:57:07,395 | INFO     | . stage-out = 1 s
[2025-12-02 03:58:12] 2025-12-02 02:57:07,395 | INFO     | . log creation = 0 s
[2025-12-02 03:58:12] 2025-12-02 02:57:07,395 | INFO     | ..............................
[2025-12-02 03:58:12] 2025-12-02 02:57:07,443 | INFO     | 
[2025-12-02 03:58:12] 2025-12-02 02:57:07,443 | INFO     | job summary report
[2025-12-02 03:58:12] 2025-12-02 02:57:07,443 | INFO     | --------------------------------------------------
[2025-12-02 03:58:12] 2025-12-02 02:57:07,443 | INFO     | PanDA job id: 6894267667
[2025-12-02 03:58:12] 2025-12-02 02:57:07,443 | INFO     | task id: 47533967
[2025-12-02 03:58:12] 2025-12-02 02:57:07,443 | INFO     | errors: (none)
[2025-12-02 03:58:12] 2025-12-02 02:57:07,443 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 03:58:12] 2025-12-02 02:57:07,443 | INFO     | pilot state: finished 
[2025-12-02 03:58:12] 2025-12-02 02:57:07,444 | INFO     | transexitcode: 0
[2025-12-02 03:58:12] 2025-12-02 02:57:07,444 | INFO     | exeerrorcode: 0
[2025-12-02 03:58:12] 2025-12-02 02:57:07,444 | INFO     | exeerrordiag: 
[2025-12-02 03:58:12] 2025-12-02 02:57:07,444 | INFO     | exitcode: 0
[2025-12-02 03:58:12] 2025-12-02 02:57:07,444 | INFO     | exitmsg: OK
[2025-12-02 03:58:12] 2025-12-02 02:57:07,444 | INFO     | cpuconsumptiontime: 120600 s
[2025-12-02 03:58:12] 2025-12-02 02:57:07,444 | INFO     | nevents: 1000
[2025-12-02 03:58:12] 2025-12-02 02:57:07,444 | INFO     | neventsw: 0
[2025-12-02 03:58:12] 2025-12-02 02:57:07,444 | INFO     | pid: 8683
[2025-12-02 03:58:12] 2025-12-02 02:57:07,444 | INFO     | pgrp: 8683
[2025-12-02 03:58:12] 2025-12-02 02:57:07,444 | INFO     | corecount: 8
[2025-12-02 03:58:12] 2025-12-02 02:57:07,444 | INFO     | event service: False
[2025-12-02 03:58:12] 2025-12-02 02:57:07,444 | INFO     | sizes: {0: 2284159, 1: 2284469, 2: 2284731, 11: 2284759, 15911: 2317063, 15912: 2326271, 15915: 2326461}
[2025-12-02 03:58:12] 2025-12-02 02:57:07,444 | INFO     | --------------------------------------------------
[2025-12-02 03:58:12] 2025-12-02 02:57:07,444 | INFO     | 
[2025-12-02 03:58:12] 2025-12-02 02:57:07,444 | INFO     | executing command: ls -lF /tmp/job_10941764/atlas/pilot/slots/0
[2025-12-02 03:58:12] 2025-12-02 02:57:07,453 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 03:58:12] 2025-12-02 02:57:07,453 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 03:58:12] 2025-12-02 02:57:07,453 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 03:58:12] 2025-12-02 02:57:07,453 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 03:58:12] 2025-12-02 02:57:07,453 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 03:58:12] 2025-12-02 02:57:07,453 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 03:58:12] 2025-12-02 02:57:07,453 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 03:58:12] 2025-12-02 02:57:07,453 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 03:58:12] 2025-12-02 02:57:07,453 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 03:58:12] 2025-12-02 02:57:07,453 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 03:58:12] 2025-12-02 02:57:07,453 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 03:58:12] 2025-12-02 02:57:07,454 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 03:58:12] 2025-12-02 02:57:07,454 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 03:58:12] 2025-12-02 02:57:07,454 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 03:58:12] 2025-12-02 02:57:07,454 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 03:58:12] 2025-12-02 02:57:07,454 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 03:58:12] 2025-12-02 02:57:07,454 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 03:58:12] 2025-12-02 02:57:07,454 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 03:58:12] 2025-12-02 02:57:07,454 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 03:58:12] 2025-12-02 02:57:07,454 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 03:58:12] 2025-12-02 02:57:07,454 | INFO     | job 6894267667 has completed (purged errors)
[2025-12-02 03:58:12] 2025-12-02 02:57:07,454 | INFO     | overall cleanup function is called
[2025-12-02 03:58:12] 2025-12-02 02:57:08,461 | INFO     | --- collectZombieJob: --- 10, [8683]
[2025-12-02 03:58:12] 2025-12-02 02:57:08,461 | INFO     | zombie collector waiting for pid 8683
[2025-12-02 03:58:12] 2025-12-02 02:57:08,461 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 03:58:12] 2025-12-02 02:57:08,462 | INFO     | collected zombie processes
[2025-12-02 03:58:12] 2025-12-02 02:57:08,462 | INFO     | will attempt to kill all subprocesses of pid=8683
[2025-12-02 03:58:12] 2025-12-02 02:57:08,552 | INFO     | process IDs to be killed: [8683] (in reverse order)
[2025-12-02 03:58:12] 2025-12-02 02:57:08,583 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 03:58:12] 2025-12-02 02:57:08,583 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 03:58:12] 2025-12-02 02:57:08,586 | INFO     | did not find any defunct processes belonging to 8683
[2025-12-02 03:58:12] 2025-12-02 02:57:08,589 | INFO     | did not find any defunct processes belonging to 8683
[2025-12-02 03:58:12] 2025-12-02 02:57:08,589 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 03:58:12] 2025-12-02 02:57:08,589 | INFO     | ready for new job
[2025-12-02 03:58:12] 2025-12-02 02:57:08,589 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 03:58:12] 2025-12-02 02:57:08,590 | INFO     | ***************************************
[2025-12-02 03:58:12] 2025-12-02 02:57:08,590 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 03:58:12] 2025-12-02 02:57:08,590 | INFO     | ***************************************
[2025-12-02 03:58:12] 2025-12-02 02:57:08,591 | INFO     | 
[2025-12-02 03:58:12] 2025-12-02 02:57:08,604 | INFO     | architecture information:
[2025-12-02 03:58:12] 2025-12-02 02:57:08,604 | INFO     | executing command: cat /etc/os-release
[2025-12-02 03:58:12] 2025-12-02 02:57:08,610 | INFO     | cat /etc/os-release:
[2025-12-02 03:58:12] NAME="CentOS Linux"
[2025-12-02 03:58:12] VERSION="7 (Core)"
[2025-12-02 03:58:12] ID="centos"
[2025-12-02 03:58:12] ID_LIKE="rhel fedora"
[2025-12-02 03:58:12] VERSION_ID="7"
[2025-12-02 03:58:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 03:58:12] ANSI_COLOR="0;31"
[2025-12-02 03:58:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 03:58:12] HOME_URL="https://www.centos.org/"
[2025-12-02 03:58:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 03:58:12] 
[2025-12-02 03:58:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 03:58:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 03:58:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 03:58:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 03:58:12] 
[2025-12-02 03:58:12] 2025-12-02 02:57:08,610 | INFO     | ***************************************
[2025-12-02 03:58:12] 2025-12-02 02:57:09,113 | INFO     | executing command: df -mP /tmp/job_10941764/atlas/pilot/slots/0
[2025-12-02 03:58:12] 2025-12-02 02:57:09,119 | INFO     | sufficient remaining disk space (225190084608 B)
[2025-12-02 03:58:12] 2025-12-02 02:57:09,119 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 03:58:12] 2025-12-02 02:57:09,119 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 03:58:12] 2025-12-02 02:57:09,119 | INFO     | update_server=False
[2025-12-02 03:58:12] 2025-12-02 02:57:09,119 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 03:58:12] 2025-12-02 02:57:09,119 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 03:58:12] 2025-12-02 02:57:09,119 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 03:58:12] 2025-12-02 02:57:09,217 | INFO     | all data control threads have been joined
[2025-12-02 03:58:12] 2025-12-02 02:57:09,414 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-02 03:58:12] 2025-12-02 02:57:09,415 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-02 03:58:12] 2025-12-02 02:57:09,415 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 03:58:12] 2025-12-02 02:57:09,415 | INFO     | will abort loop
[2025-12-02 03:58:12] 2025-12-02 02:57:10,052 | INFO     | all job control threads have been joined
[2025-12-02 03:58:12] 2025-12-02 02:57:10,124 | INFO     | [job] retrieve thread has finished
[2025-12-02 03:58:12] 2025-12-02 02:57:10,125 | INFO     | [job] queue monitor thread has finished
[2025-12-02 03:58:12] 2025-12-02 02:57:10,222 | INFO     | [data] control thread has finished
[2025-12-02 03:58:12] 2025-12-02 02:57:10,420 | INFO     | [job] job monitor thread has finished
[2025-12-02 03:58:12] 2025-12-02 02:57:10,602 | INFO     | all payload control threads have been joined
[2025-12-02 03:58:12] 2025-12-02 02:57:10,775 | INFO     | [job] validate thread has finished
[2025-12-02 03:58:12] 2025-12-02 02:57:10,795 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 03:58:12] 2025-12-02 02:57:11,057 | INFO     | [job] control thread has finished
[2025-12-02 03:58:12] 2025-12-02 02:57:11,125 | INFO     | [data] copytool_out thread has finished
[2025-12-02 03:58:12] 2025-12-02 02:57:11,244 | INFO     | [payload] validate_post thread has finished
[2025-12-02 03:58:12] 2025-12-02 02:57:11,336 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 03:58:12] 2025-12-02 02:57:11,356 | INFO     | [data] copytool_in thread has finished
[2025-12-02 03:58:12] 2025-12-02 02:57:11,376 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 03:58:12] 2025-12-02 02:57:11,385 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 03:58:12] 2025-12-02 02:57:11,536 | INFO     | [payload] failed_post thread has finished
[2025-12-02 03:58:12] 2025-12-02 02:57:11,607 | INFO     | [payload] control thread has finished
[2025-12-02 03:58:12] 2025-12-02 02:57:15,338 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 03:58:12] 2025-12-02 02:57:19,369 | INFO     | job.realtimelogging is not enabled
[2025-12-02 03:58:12] 2025-12-02 02:57:20,374 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 03:58:12] 2025-12-02 02:57:39,805 | INFO     | PID=1917 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-02 03:58:12] 2025-12-02 02:57:39,806 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 03:58:12] 2025-12-02 02:57:39,806 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 03:58:12] 2025-12-02 02:57:39,806 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 03:58:12] 2025-12-02 02:58:06,044 | INFO     | [monitor] cgroup control has ended
[2025-12-02 03:58:12] 2025-12-02 02:58:06,831 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456062920448)>']
[2025-12-02 03:58:12] 2025-12-02 02:58:06,942 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 03:58:12] 2025-12-02 02:58:06,942 | INFO     | [monitor] control thread has ended
[2025-12-02 03:58:12] 2025-12-02 02:58:11,856 | INFO     | all workflow threads have been joined
[2025-12-02 03:58:12] 2025-12-02 02:58:11,856 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 03:58:12] 2025-12-02 02:58:11,856 | INFO     | traces error code: 0
[2025-12-02 03:58:12] 2025-12-02 02:58:11,856 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 03:58:12] 2025-12-02 02:58:11,908 [wrapper] ==== pilot stdout END ====
[2025-12-02 03:58:12] 2025-12-02 02:58:11,910 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 03:58:12] 2025-12-02 02:58:11,911 [wrapper] pilotpid: 1917
[2025-12-02 03:58:12] 2025-12-02 02:58:11,912 [wrapper] Pilot exit status: 0
[2025-12-02 03:58:12] 2025-12-02 02:58:11,916 [wrapper] pandaids: 6894267667
[2025-12-02 03:58:12] 2025-12-02 02:58:11,937 [wrapper] cleanup supervisor_pilot 22473 1918
[2025-12-02 03:58:12] 2025-12-02 02:58:11,938 [wrapper] Test setup, not cleaning
[2025-12-02 03:58:12] 2025-12-02 02:58:11,939 [wrapper] apfmon messages muted
[2025-12-02 03:58:12] 2025-12-02 02:58:11,941 [wrapper] ==== wrapper stdout END ====
[2025-12-02 03:58:12] 2025-12-02 02:58:11,942 [wrapper] ==== wrapper stderr END ====
[2025-12-02 03:58:12]  *** Error codes and diagnostics ***
[2025-12-02 03:58:12]     "exeErrorCode": 0,
[2025-12-02 03:58:12]     "exeErrorDiag": "",
[2025-12-02 03:58:12]     "pilotErrorCode": 0,
[2025-12-02 03:58:12]     "pilotErrorDiag": "",
[2025-12-02 03:58:12]  *** Listing of results directory ***
[2025-12-02 03:58:12] total 1309944
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user    576529 Nov 21 06:09 pilot3.tar.gz
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user      5112 Nov 21 06:24 queuedata.json
[2025-12-02 03:58:12] -rwx------ 1 mf493845 unix-user     36292 Nov 21 06:24 runpilot2-wrapper.sh
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user       100 Dec  1 21:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 03:58:12] -rwxr-xr-x 1 mf493845 unix-user      7986 Dec  1 21:46 run_atlas
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user       105 Dec  1 21:46 job.xml
[2025-12-02 03:58:12] -rw-r--r-- 2 mf493845 unix-user 411190569 Dec  1 23:31 EVNT.47493127._002244.pool.root.1
[2025-12-02 03:58:12] -rw-r--r-- 2 mf493845 unix-user     15847 Dec  1 23:31 start_atlas.sh
[2025-12-02 03:58:12] drwxrwx--x 2 mf493845 unix-user       100 Dec  1 23:31 shared
[2025-12-02 03:58:12] -rw-r--r-- 2 mf493845 unix-user    590105 Dec  1 23:31 input.tar.gz
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user      6391 Dec  1 23:31 init_data.xml
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user         0 Dec  1 23:31 boinc_setup_complete
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user      8192 Dec  1 23:31 boinc_mmap_file
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user         0 Dec  1 23:31 boinc_lockfile
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user      2786 Dec  1 23:31 pandaJob.out
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user    992004 Dec  1 23:31 agis_schedconf.cvmfs.json
[2025-12-02 03:58:12] drwx------ 5 mf493845 unix-user       440 Dec  1 23:31 pilot3
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user 918575038 Dec  2 03:56 HITS.47533967._002158.pool.root.1
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user      1026 Dec  2 03:57 memory_monitor_summary.json
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user   1516240 Dec  2 03:57 agis_ddmendpoints.agis.ALL.json
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user   1557402 Dec  2 03:57 log.47533967._002158.job.log.tgz.1
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user      8566 Dec  2 03:57 heartbeat.json
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user        95 Dec  2 03:57 pilot_heartbeat.json
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user      5017 Dec  2 03:58 pilotlog.txt
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user   2306048 Dec  2 03:58 log.47533967._002158.job.log.1
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user       353 Dec  2 03:58 output.list
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user       620 Dec  2 03:58 runtime_log
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user   3880960 Dec  2 03:58 result.tar.gz
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user       649 Dec  2 03:58 zryMDmeoYg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrMHKDmPK2bQo.diag
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user      9221 Dec  2 03:58 runtime_log.err
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user     21673 Dec  2 03:58 stderr.txt
[2025-12-02 03:58:12] HITS file was successfully produced:
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user 918575038 Dec  2 03:56 shared/HITS.pool.root.1
[2025-12-02 03:58:12]  *** Contents of shared directory: ***
[2025-12-02 03:58:12] total 1302992
[2025-12-02 03:58:12] -rw-r--r-- 2 mf493845 unix-user 411190569 Dec  1 23:31 ATLAS.root_0
[2025-12-02 03:58:12] -rw-r--r-- 2 mf493845 unix-user     15847 Dec  1 23:31 start_atlas.sh
[2025-12-02 03:58:12] -rw-r--r-- 2 mf493845 unix-user    590105 Dec  1 23:31 input.tar.gz
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user 918575038 Dec  2 03:56 HITS.pool.root.1
[2025-12-02 03:58:12] -rw------- 1 mf493845 unix-user   3880960 Dec  2 03:58 result.tar.gz
03:58:13 (30362): run_atlas exited; CPU time 120798.973024
03:58:13 (30362): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN