Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:04:45 (1414687): wrapper (7.7.26015): starting
15:04:45 (1414687): wrapper: running run_atlas (--nthreads 9)
[2025-12-01 15:04:45] Arguments: --nthreads 9
[2025-12-01 15:04:45] Threads: 9
[2025-12-01 15:04:45] Checking for CVMFS
[2025-12-01 15:04:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 15:04:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 15:04:46] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 15:04:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 15:04:46] 2.13.3.0 4548 1388 77164 153530 0 116 4898040 37030913 1910 16776704 0 1771278 99.586 736074 48736 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-01 15:04:46] CVMFS is ok
[2025-12-01 15:04:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 15:04:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 15:04:46] Further information can be found at the LHC@home message board.
[2025-12-01 15:04:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 15:04:46] Checking for apptainer binary...
[2025-12-01 15:04:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 15:04:46] Running /usr/bin/apptainer --version
[2025-12-01 15:04:46] apptainer version 1.4.4-1.el9
[2025-12-01 15:04:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 15:04:46] c-205-36.aglt2.org
[2025-12-01 15:04:46] apptainer works
[2025-12-01 15:04:46] Set ATHENA_PROC_NUMBER=9
[2025-12-01 15:04:46] Set ATHENA_CORE_NUMBER=9
[2025-12-01 15:04:46] Starting ATLAS job with PandaID=6901063616
[2025-12-01 15:04:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 00:06:54]  *** The last 200 lines of the pilot log: ***
[2025-12-02 00:06:54] 2025-12-02 05:06:10,500 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 00:06:54] 2025-12-02 05:06:10,500 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 00:06:54] 2025-12-02 05:06:10,511 | INFO     | fitting pss+swap vs Time
[2025-12-02 00:06:54] 2025-12-02 05:06:10,512 | INFO     | sum of square deviations: 46688700513.0
[2025-12-02 00:06:54] 2025-12-02 05:06:10,520 | INFO     | sum of deviations: 649299750718.4999
[2025-12-02 00:06:54] 2025-12-02 05:06:10,520 | INFO     | mean x: 1764635715.5
[2025-12-02 00:06:54] 2025-12-02 05:06:10,520 | INFO     | mean y: 3092314.4718045113
[2025-12-02 00:06:54] 2025-12-02 05:06:10,521 | INFO     | intersect: -24537696304.480682
[2025-12-02 00:06:54] 2025-12-02 05:06:10,522 | INFO     | chi2: 5.0955573850852955
[2025-12-02 00:06:54] 2025-12-02 05:06:10,522 | INFO     | sum of square deviations: 45384620248.0
[2025-12-02 00:06:54] 2025-12-02 05:06:10,530 | INFO     | sum of deviations: 819504956889.9995
[2025-12-02 00:06:54] 2025-12-02 05:06:10,530 | INFO     | mean x: 1764635563.0
[2025-12-02 00:06:54] 2025-12-02 05:06:10,531 | INFO     | mean y: 3112208.8235294116
[2025-12-02 00:06:54] 2025-12-02 05:06:10,531 | INFO     | intersect: -31860712652.564457
[2025-12-02 00:06:54] 2025-12-02 05:06:10,532 | INFO     | chi2: 2.476778008905057
[2025-12-02 00:06:54] 2025-12-02 05:06:10,532 | INFO     | current chi2=2.476778008905057 (change=51.39338404558861 %)
[2025-12-02 00:06:54] 2025-12-02 05:06:10,533 | INFO     | sum of square deviations: 44105052070.5
[2025-12-02 00:06:54] 2025-12-02 05:06:10,540 | INFO     | sum of deviations: 870082516257.5
[2025-12-02 00:06:54] 2025-12-02 05:06:10,540 | INFO     | mean x: 1764635410.5
[2025-12-02 00:06:54] 2025-12-02 05:06:10,541 | INFO     | mean y: 3118221.4233716475
[2025-12-02 00:06:54] 2025-12-02 05:06:10,541 | INFO     | intersect: -34808730901.68142
[2025-12-02 00:06:54] 2025-12-02 05:06:10,542 | INFO     | chi2: 2.0723642735192436
[2025-12-02 00:06:54] 2025-12-02 05:06:10,542 | INFO     | current chi2=2.0723642735192436 (change=16.32821891714866 %)
[2025-12-02 00:06:54] 2025-12-02 05:06:10,542 | INFO     | right removable region: 521
[2025-12-02 00:06:54] 2025-12-02 05:06:10,543 | INFO     | sum of square deviations: 45384620248.0
[2025-12-02 00:06:54] 2025-12-02 05:06:10,550 | INFO     | sum of deviations: 500616749255.00006
[2025-12-02 00:06:54] 2025-12-02 05:06:10,550 | INFO     | mean x: 1764635868.0
[2025-12-02 00:06:54] 2025-12-02 05:06:10,551 | INFO     | mean y: 3109659.9032258065
[2025-12-02 00:06:54] 2025-12-02 05:06:10,551 | INFO     | intersect: -19461772210.422993
[2025-12-02 00:06:54] 2025-12-02 05:06:10,552 | INFO     | chi2: 3.103693889429188
[2025-12-02 00:06:54] 2025-12-02 05:06:10,552 | INFO     | current chi2=3.103693889429188 (change=39.09019848321786 %)
[2025-12-02 00:06:54] 2025-12-02 05:06:10,553 | INFO     | sum of square deviations: 44105052070.5
[2025-12-02 00:06:54] 2025-12-02 05:06:10,560 | INFO     | sum of deviations: 468509438874.49994
[2025-12-02 00:06:54] 2025-12-02 05:06:10,560 | INFO     | mean x: 1764636020.5
[2025-12-02 00:06:54] 2025-12-02 05:06:10,560 | INFO     | mean y: 3113482.80651341
[2025-12-02 00:06:54] 2025-12-02 05:06:10,561 | INFO     | intersect: -18741873609.84364
[2025-12-02 00:06:54] 2025-12-02 05:06:10,561 | INFO     | chi2: 3.079586161767957
[2025-12-02 00:06:54] 2025-12-02 05:06:10,562 | INFO     | current chi2=3.079586161767957 (change=0.7767430848557184 %)
[2025-12-02 00:06:54] 2025-12-02 05:06:10,562 | INFO     | left removable region: 20
[2025-12-02 00:06:54] 2025-12-02 05:06:10,563 | INFO     | sum of square deviations: 38993289250.0
[2025-12-02 00:06:54] 2025-12-02 05:06:10,569 | INFO     | sum of deviations: 629503101048.0
[2025-12-02 00:06:54] 2025-12-02 05:06:10,570 | INFO     | mean x: 1764635990.0
[2025-12-02 00:06:54] 2025-12-02 05:06:10,570 | INFO     | mean y: 3146964.7724550897
[2025-12-02 00:06:54] 2025-12-02 05:06:10,570 | INFO     | intersect: -28484930068.27516
[2025-12-02 00:06:54] 2025-12-02 05:06:10,571 | INFO     | chi2: 0.0175662024725371
[2025-12-02 00:06:54] 2025-12-02 05:06:10,571 | INFO     | current memory leak: 16.14 B/s (using 501 data points, chi2=0.02)
[2025-12-02 00:06:54] 2025-12-02 05:06:10,572 | INFO     | could have reported an average CPU frequency of 2618 MHz (21 samples)
[2025-12-02 00:06:54] 2025-12-02 05:06:10,572 | INFO     | ..............................
[2025-12-02 00:06:54] 2025-12-02 05:06:10,573 | INFO     | . Timing measurements:
[2025-12-02 00:06:54] 2025-12-02 05:06:10,573 | INFO     | . get job = 0 s
[2025-12-02 00:06:54] 2025-12-02 05:06:10,573 | INFO     | . initial setup = 2 s
[2025-12-02 00:06:54] 2025-12-02 05:06:10,573 | INFO     | . payload setup = 5 s
[2025-12-02 00:06:54] 2025-12-02 05:06:10,574 | INFO     | . stage-in = 0 s
[2025-12-02 00:06:54] 2025-12-02 05:06:10,574 | INFO     | . payload execution = 32443 s
[2025-12-02 00:06:54] 2025-12-02 05:06:10,574 | INFO     | . stage-out = 3 s
[2025-12-02 00:06:54] 2025-12-02 05:06:10,574 | INFO     | . log creation = 0 s
[2025-12-02 00:06:54] 2025-12-02 05:06:10,574 | INFO     | ..............................
[2025-12-02 00:06:54] 2025-12-02 05:06:10,685 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6901063616: 8839579 B (within 2537553920 B limit)
[2025-12-02 00:06:54] 2025-12-02 05:06:10,686 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6901063616/HITS.47556185._003254.pool.root.1 does not exist (skip from workdir size calculation)
[2025-12-02 00:06:54] 2025-12-02 05:06:10,686 | INFO     | total size of present files: 0 B (workdir size: 8839579 B)
[2025-12-02 00:06:54] 2025-12-02 05:06:10,686 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6901063616/HITS.47556185._003254.pool.root.1 since it does not exist
[2025-12-02 00:06:54] 2025-12-02 05:06:10,889 | INFO     | number of running child processes to parent process 1426897: 1
[2025-12-02 00:06:54] 2025-12-02 05:06:10,889 | INFO     | maximum number of monitored processes: 14
[2025-12-02 00:06:54] 2025-12-02 05:06:10,889 | INFO     | aborting job monitoring since job object (job id=6901063616) has expired
[2025-12-02 00:06:54] 2025-12-02 05:06:10,903 | INFO     | 
[2025-12-02 00:06:54] 2025-12-02 05:06:10,903 | INFO     | job summary report
[2025-12-02 00:06:54] 2025-12-02 05:06:10,903 | INFO     | --------------------------------------------------
[2025-12-02 00:06:54] 2025-12-02 05:06:10,903 | INFO     | PanDA job id: 6901063616
[2025-12-02 00:06:54] 2025-12-02 05:06:10,904 | INFO     | task id: 47556185
[2025-12-02 00:06:54] 2025-12-02 05:06:10,904 | INFO     | errors: (none)
[2025-12-02 00:06:54] 2025-12-02 05:06:10,904 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 00:06:54] 2025-12-02 05:06:10,904 | INFO     | pilot state: finished 
[2025-12-02 00:06:54] 2025-12-02 05:06:10,904 | INFO     | transexitcode: 0
[2025-12-02 00:06:54] 2025-12-02 05:06:10,904 | INFO     | exeerrorcode: 0
[2025-12-02 00:06:54] 2025-12-02 05:06:10,904 | INFO     | exeerrordiag: 
[2025-12-02 00:06:54] 2025-12-02 05:06:10,904 | INFO     | exitcode: 0
[2025-12-02 00:06:54] 2025-12-02 05:06:10,905 | INFO     | exitmsg: OK
[2025-12-02 00:06:54] 2025-12-02 05:06:10,905 | INFO     | cpuconsumptiontime: 285921 s
[2025-12-02 00:06:54] 2025-12-02 05:06:10,905 | INFO     | nevents: 1000
[2025-12-02 00:06:54] 2025-12-02 05:06:10,905 | INFO     | neventsw: 0
[2025-12-02 00:06:54] 2025-12-02 05:06:10,905 | INFO     | pid: 1426897
[2025-12-02 00:06:54] 2025-12-02 05:06:10,905 | INFO     | pgrp: 1426897
[2025-12-02 00:06:54] 2025-12-02 05:06:10,905 | INFO     | corecount: 9
[2025-12-02 00:06:54] 2025-12-02 05:06:10,905 | INFO     | event service: False
[2025-12-02 00:06:54] 2025-12-02 05:06:10,905 | INFO     | sizes: {0: 2284093, 1: 2284292, 4: 2284554, 12: 2284582, 32451: 2324309, 32452: 2324308, 32456: 2333542, 32459: 2333732}
[2025-12-02 00:06:54] 2025-12-02 05:06:10,906 | INFO     | --------------------------------------------------
[2025-12-02 00:06:54] 2025-12-02 05:06:10,906 | INFO     | 
[2025-12-02 00:06:54] 2025-12-02 05:06:10,906 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-02 00:06:54] 2025-12-02 05:06:10,922 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 00:06:54] 2025-12-02 05:06:10,923 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 00:06:54] 2025-12-02 05:06:10,923 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 00:06:54] 2025-12-02 05:06:10,923 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 00:06:54] 2025-12-02 05:06:10,923 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 00:06:54] 2025-12-02 05:06:10,923 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 00:06:54] 2025-12-02 05:06:10,924 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 00:06:54] 2025-12-02 05:06:10,924 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 00:06:54] 2025-12-02 05:06:10,924 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 00:06:54] 2025-12-02 05:06:10,924 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 00:06:54] 2025-12-02 05:06:10,924 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 00:06:54] 2025-12-02 05:06:10,924 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 00:06:54] 2025-12-02 05:06:10,924 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 00:06:54] 2025-12-02 05:06:10,924 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 00:06:54] 2025-12-02 05:06:10,925 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 00:06:54] 2025-12-02 05:06:10,925 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 00:06:54] 2025-12-02 05:06:10,925 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 00:06:54] 2025-12-02 05:06:10,925 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 00:06:54] 2025-12-02 05:06:10,925 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 00:06:54] 2025-12-02 05:06:10,925 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 00:06:54] 2025-12-02 05:06:10,925 | INFO     | job 6901063616 has completed (purged errors)
[2025-12-02 00:06:54] 2025-12-02 05:06:10,926 | INFO     | overall cleanup function is called
[2025-12-02 00:06:54] 2025-12-02 05:06:11,941 | INFO     | --- collectZombieJob: --- 10, [1426897]
[2025-12-02 00:06:54] 2025-12-02 05:06:11,941 | INFO     | zombie collector waiting for pid 1426897
[2025-12-02 00:06:54] 2025-12-02 05:06:11,941 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 00:06:54] 2025-12-02 05:06:11,941 | INFO     | collected zombie processes
[2025-12-02 00:06:54] 2025-12-02 05:06:11,941 | INFO     | will attempt to kill all subprocesses of pid=1426897
[2025-12-02 00:06:54] 2025-12-02 05:06:12,149 | INFO     | process IDs to be killed: [1426897] (in reverse order)
[2025-12-02 00:06:54] 2025-12-02 05:06:12,205 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 00:06:54] 2025-12-02 05:06:12,205 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 00:06:54] 2025-12-02 05:06:12,211 | INFO     | did not find any defunct processes belonging to 1426897
[2025-12-02 00:06:54] 2025-12-02 05:06:12,216 | INFO     | did not find any defunct processes belonging to 1426897
[2025-12-02 00:06:54] 2025-12-02 05:06:12,218 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 00:06:54] 2025-12-02 05:06:12,218 | INFO     | ready for new job
[2025-12-02 00:06:54] 2025-12-02 05:06:12,218 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 00:06:54] 2025-12-02 05:06:12,222 | INFO     | ***************************************
[2025-12-02 00:06:54] 2025-12-02 05:06:12,222 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 00:06:54] 2025-12-02 05:06:12,222 | INFO     | ***************************************
[2025-12-02 00:06:54] 2025-12-02 05:06:12,222 | INFO     | 
[2025-12-02 00:06:54] 2025-12-02 05:06:12,224 | INFO     | architecture information:
[2025-12-02 00:06:54] 2025-12-02 05:06:12,225 | INFO     | executing command: cat /etc/os-release
[2025-12-02 00:06:54] 2025-12-02 05:06:12,238 | INFO     | cat /etc/os-release:
[2025-12-02 00:06:54] NAME="CentOS Linux"
[2025-12-02 00:06:54] VERSION="7 (Core)"
[2025-12-02 00:06:54] ID="centos"
[2025-12-02 00:06:54] ID_LIKE="rhel fedora"
[2025-12-02 00:06:54] VERSION_ID="7"
[2025-12-02 00:06:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 00:06:54] ANSI_COLOR="0;31"
[2025-12-02 00:06:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 00:06:54] HOME_URL="https://www.centos.org/"
[2025-12-02 00:06:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 00:06:54] 
[2025-12-02 00:06:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 00:06:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 00:06:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 00:06:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 00:06:54] 
[2025-12-02 00:06:54] 2025-12-02 05:06:12,238 | INFO     | ***************************************
[2025-12-02 00:06:54] 2025-12-02 05:06:12,739 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-02 00:06:54] 2025-12-02 05:06:12,752 | INFO     | sufficient remaining disk space (39618347008 B)
[2025-12-02 00:06:54] 2025-12-02 05:06:12,752 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 00:06:54] 2025-12-02 05:06:12,752 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 00:06:54] 2025-12-02 05:06:12,752 | INFO     | update_server=False
[2025-12-02 00:06:54] 2025-12-02 05:06:12,753 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 00:06:54] 2025-12-02 05:06:12,753 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 00:06:54] 2025-12-02 05:06:12,753 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 00:06:54] 2025-12-02 05:06:12,754 | INFO     | aborting loop
[2025-12-02 00:06:54] 2025-12-02 05:06:12,898 | INFO     | all payload control threads have been joined
[2025-12-02 00:06:54] 2025-12-02 05:06:13,028 | INFO     | all data control threads have been joined
[2025-12-02 00:06:54] 2025-12-02 05:06:13,589 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 00:06:54] 2025-12-02 05:06:13,758 | INFO     | [job] retrieve thread has finished
[2025-12-02 00:06:54] 2025-12-02 05:06:13,759 | INFO     | [job] job monitor thread has finished
[2025-12-02 00:06:54] 2025-12-02 05:06:13,836 | INFO     | all job control threads have been joined
[2025-12-02 00:06:54] 2025-12-02 05:06:13,899 | INFO     | [payload] control thread has finished
[2025-12-02 00:06:54] 2025-12-02 05:06:13,909 | INFO     | [payload] failed_post thread has finished
[2025-12-02 00:06:54] 2025-12-02 05:06:14,016 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 00:06:54] 2025-12-02 05:06:14,031 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 00:06:54] 2025-12-02 05:06:14,034 | INFO     | [data] control thread has finished
[2025-12-02 00:06:54] 2025-12-02 05:06:14,186 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 00:06:54] 2025-12-02 05:06:14,757 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 00:06:54] 2025-12-02 05:06:14,759 | INFO     | [data] copytool_out thread has finished
[2025-12-02 00:06:54] 2025-12-02 05:06:14,842 | INFO     | [job] control thread has finished
[2025-12-02 00:06:54] 2025-12-02 05:06:14,885 | INFO     | [data] copytool_in thread has finished
[2025-12-02 00:06:54] 2025-12-02 05:06:14,995 | INFO     | [payload] validate_post thread has finished
[2025-12-02 00:06:54] 2025-12-02 05:06:15,126 | INFO     | [job] validate thread has finished
[2025-12-02 00:06:54] 2025-12-02 05:06:15,694 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 00:06:54] 2025-12-02 05:06:16,699 | INFO     | [job] queue monitor thread has finished
[2025-12-02 00:06:54] 2025-12-02 05:06:17,591 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 00:06:54] 2025-12-02 05:06:43,373 | INFO     | PID=1418724 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 00:06:54] 2025-12-02 05:06:43,373 | INFO     | .. there are 3 such processes running
[2025-12-02 00:06:54] 2025-12-02 05:06:43,374 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 00:06:54] 2025-12-02 05:06:43,374 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 00:06:54] 2025-12-02 05:06:43,374 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 00:06:54] 2025-12-02 05:06:47,454 | INFO     | [monitor] cgroup control has ended
[2025-12-02 00:06:54] 2025-12-02 05:06:49,245 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139998181906240)>', '<ExcThread(monitor, started 139997462124288)>']
[2025-12-02 00:06:54] 2025-12-02 05:06:49,404 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 00:06:54] 2025-12-02 05:06:49,404 | INFO     | [monitor] control thread has ended
[2025-12-02 00:06:54] 2025-12-02 05:06:54,271 | INFO     | all workflow threads have been joined
[2025-12-02 00:06:54] 2025-12-02 05:06:54,271 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 00:06:54] 2025-12-02 05:06:54,271 | INFO     | traces error code: 0
[2025-12-02 00:06:54] 2025-12-02 05:06:54,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 00:06:54] 2025-12-02 05:06:54,390 [wrapper] ==== pilot stdout END ====
[2025-12-02 00:06:54] 2025-12-02 05:06:54,392 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 00:06:54] 2025-12-02 05:06:54,393 [wrapper] pilotpid: 1418724
[2025-12-02 00:06:54] 2025-12-02 05:06:54,395 [wrapper] Pilot exit status: 0
[2025-12-02 00:06:54] 2025-12-02 05:06:54,403 [wrapper] pandaids: 6901063616
[2025-12-02 00:06:54] 2025-12-02 05:06:54,437 [wrapper] cleanup supervisor_pilot 1930547 1418725
[2025-12-02 00:06:54] 2025-12-02 05:06:54,440 [wrapper] Test setup, not cleaning
[2025-12-02 00:06:54] 2025-12-02 05:06:54,441 [wrapper] apfmon messages muted
[2025-12-02 00:06:54] 2025-12-02 05:06:54,443 [wrapper] ==== wrapper stdout END ====
[2025-12-02 00:06:54] 2025-12-02 05:06:54,445 [wrapper] ==== wrapper stderr END ====
[2025-12-02 00:06:54]  *** Error codes and diagnostics ***
[2025-12-02 00:06:54]     "exeErrorCode": 0,
[2025-12-02 00:06:54]     "exeErrorDiag": "",
[2025-12-02 00:06:54]     "pilotErrorCode": 0,
[2025-12-02 00:06:54]     "pilotErrorDiag": "",
[2025-12-02 00:06:54]  *** Listing of results directory ***
[2025-12-02 00:06:54] total 1321028
[2025-12-02 00:06:54] -rwx------. 1 boincer umatlas     36292 Nov 29 18:01 runpilot2-wrapper.sh
[2025-12-02 00:06:54] -rw-r--r--. 1 boincer umatlas      5112 Nov 29 18:01 queuedata.json
[2025-12-02 00:06:54] -rw-r--r--. 1 boincer umatlas    576529 Nov 29 18:01 pilot3.tar.gz
[2025-12-02 00:06:54] -rw-r--r--. 1 boincer umatlas       100 Dec  1 15:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 00:06:54] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  1 15:04 run_atlas
[2025-12-02 00:06:54] -rw-r--r--. 1 boincer umatlas       105 Dec  1 15:04 job.xml
[2025-12-02 00:06:54] -rw-r--r--. 2 boincer umatlas 410835354 Dec  1 15:04 EVNT.47483658._004562.pool.root.1
[2025-12-02 00:06:54] -rw-r--r--. 2 boincer umatlas     15847 Dec  1 15:04 start_atlas.sh
[2025-12-02 00:06:54] drwxrwx--x. 2 boincer umatlas      4096 Dec  1 15:04 shared
[2025-12-02 00:06:54] -rw-r--r--. 2 boincer umatlas    590093 Dec  1 15:04 input.tar.gz
[2025-12-02 00:06:54] -rw-r--r--. 1 boincer umatlas         0 Dec  1 15:04 boinc_lockfile
[2025-12-02 00:06:54] -rw-r--r--. 1 boincer umatlas      2785 Dec  1 15:04 pandaJob.out
[2025-12-02 00:06:54] -rw-------. 1 boincer umatlas    992004 Dec  1 15:04 agis_schedconf.cvmfs.json
[2025-12-02 00:06:54] drwx------. 5 boincer umatlas      4096 Dec  1 15:04 pilot3
[2025-12-02 00:06:54] -rw-r--r--. 1 boincer umatlas       532 Dec  1 23:55 boinc_task_state.xml
[2025-12-02 00:06:54] -rw-r--r--. 1 boincer umatlas      6526 Dec  2 00:04 init_data.xml
[2025-12-02 00:06:54] -rw-------. 1 boincer umatlas 924865474 Dec  2 00:05 HITS.47556185._003254.pool.root.1
[2025-12-02 00:06:54] -rw-------. 1 boincer umatlas      1045 Dec  2 00:05 memory_monitor_summary.json
[2025-12-02 00:06:54] -rw-------. 1 boincer umatlas   1516240 Dec  2 00:06 agis_ddmendpoints.agis.ALL.json
[2025-12-02 00:06:54] -rw-------. 1 boincer umatlas   1918047 Dec  2 00:06 log.47556185._003254.job.log.tgz.1
[2025-12-02 00:06:54] -rw-------. 1 boincer umatlas      8614 Dec  2 00:06 heartbeat.json
[2025-12-02 00:06:54] -rw-------. 1 boincer umatlas        95 Dec  2 00:06 pilot_heartbeat.json
[2025-12-02 00:06:54] -rw-r--r--. 1 boincer umatlas      8192 Dec  2 00:06 boinc_mmap_file
[2025-12-02 00:06:54] -rw-r--r--. 1 boincer umatlas        29 Dec  2 00:06 wrapper_checkpoint.txt
[2025-12-02 00:06:54] -rw-------. 1 boincer umatlas      4823 Dec  2 00:06 pilotlog.txt
[2025-12-02 00:06:54] -rw-------. 1 boincer umatlas   4639992 Dec  2 00:06 log.47556185._003254.job.log.1
[2025-12-02 00:06:54] -rw-------. 1 boincer umatlas       353 Dec  2 00:06 output.list
[2025-12-02 00:06:54] -rw-r--r--. 1 boincer umatlas       620 Dec  2 00:06 runtime_log
[2025-12-02 00:06:54] -rw-------. 1 boincer umatlas   6574080 Dec  2 00:06 result.tar.gz
[2025-12-02 00:06:54] -rw-r--r--. 1 boincer umatlas      8818 Dec  2 00:06 runtime_log.err
[2025-12-02 00:06:54] -rw-------. 1 boincer umatlas       659 Dec  2 00:06 1fiNDmf7ij8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZEPKDmSrtxln.diag
[2025-12-02 00:06:54] -rw-r--r--. 1 boincer umatlas     21439 Dec  2 00:06 stderr.txt
[2025-12-02 00:06:54] HITS file was successfully produced:
[2025-12-02 00:06:54] -rw-------. 1 boincer umatlas 924865474 Dec  2 00:05 shared/HITS.pool.root.1
[2025-12-02 00:06:54]  *** Contents of shared directory: ***
[2025-12-02 00:06:54] total 1311424
[2025-12-02 00:06:54] -rw-r--r--. 2 boincer umatlas 410835354 Dec  1 15:04 ATLAS.root_0
[2025-12-02 00:06:54] -rw-r--r--. 2 boincer umatlas     15847 Dec  1 15:04 start_atlas.sh
[2025-12-02 00:06:54] -rw-r--r--. 2 boincer umatlas    590093 Dec  1 15:04 input.tar.gz
[2025-12-02 00:06:54] -rw-------. 1 boincer umatlas 924865474 Dec  2 00:05 HITS.pool.root.1
[2025-12-02 00:06:54] -rw-------. 1 boincer umatlas   6574080 Dec  2 00:06 result.tar.gz
00:06:55 (1414687): run_atlas exited; CPU time 286344.963364
00:06:55 (1414687): called boinc_finish(0)

</stderr_txt>
]]>

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