Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:02:28 (23263): wrapper (7.7.26015): starting
13:02:28 (23263): wrapper: running run_atlas (--nthreads 12)
[2025-12-01 13:02:28] Arguments: --nthreads 12
[2025-12-01 13:02:28] Threads: 12
[2025-12-01 13:02:28] Checking for CVMFS
[2025-12-01 13:02:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 13:02:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 13:02:29] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 13:02:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 13:02:29] 2.11.2.0 2913 295216 97788 153527 3 69 13527175 20275201 1 130560 1 133384912 99.963 17770639 14004 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-01 13:02:29] CVMFS is ok
[2025-12-01 13:02:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 13:02:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 13:02:29] Further information can be found at the LHC@home message board.
[2025-12-01 13:02:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 13:02:29] Checking for apptainer binary...
[2025-12-01 13:02:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 13:02:29] Running /usr/bin/apptainer --version
[2025-12-01 13:02:29] apptainer version 1.3.2-1.el7
[2025-12-01 13:02:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 13:02:30] c-205-6.aglt2.org
[2025-12-01 13:02:30] apptainer works
[2025-12-01 13:02:30] Set ATHENA_PROC_NUMBER=12
[2025-12-01 13:02:30] Set ATHENA_CORE_NUMBER=12
[2025-12-01 13:02:30] Starting ATLAS job with PandaID=6895331128
[2025-12-01 13:02:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 20:08:31]  *** The last 200 lines of the pilot log: ***
[2025-12-01 20:08:31] 2025-12-02 01:07:27,037 | INFO     | extracted standard info from prmon json
[2025-12-01 20:08:31] 2025-12-02 01:07:27,037 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 20:08:31] 2025-12-02 01:07:27,037 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 20:08:31] 2025-12-02 01:07:27,044 | INFO     | fitting pss+swap vs Time
[2025-12-01 20:08:31] 2025-12-02 01:07:27,045 | INFO     | sum of square deviations: 22646762011.973614
[2025-12-01 20:08:31] 2025-12-02 01:07:27,049 | INFO     | sum of deviations: 323904538971.0792
[2025-12-01 20:08:31] 2025-12-02 01:07:27,049 | INFO     | mean x: 1764624912.7105262
[2025-12-01 20:08:31] 2025-12-02 01:07:27,049 | INFO     | mean y: 3414189.7775119618
[2025-12-01 20:08:31] 2025-12-02 01:07:27,049 | INFO     | intersect: -25235073259.606556
[2025-12-01 20:08:31] 2025-12-02 01:07:27,050 | INFO     | chi2: 6.256758413970762
[2025-12-01 20:08:31] 2025-12-02 01:07:27,050 | INFO     | sum of square deviations: 21843787749.249393
[2025-12-01 20:08:31] 2025-12-02 01:07:27,054 | INFO     | sum of deviations: 489476848400.86896
[2025-12-01 20:08:31] 2025-12-02 01:07:27,054 | INFO     | mean x: 1764624760.2130752
[2025-12-01 20:08:31] 2025-12-02 01:07:27,054 | INFO     | mean y: 3445604.024213075
[2025-12-01 20:08:31] 2025-12-02 01:07:27,054 | INFO     | intersect: -39538367205.84048
[2025-12-01 20:08:31] 2025-12-02 01:07:27,055 | INFO     | chi2: 3.0080462312159857
[2025-12-01 20:08:31] 2025-12-02 01:07:27,055 | INFO     | current chi2=3.0080462312159857 (change=51.923247915417406 %)
[2025-12-01 20:08:31] 2025-12-02 01:07:27,055 | INFO     | sum of square deviations: 21060023149.019505
[2025-12-01 20:08:31] 2025-12-02 01:07:27,059 | INFO     | sum of deviations: 558884606778.108
[2025-12-01 20:08:31] 2025-12-02 01:07:27,059 | INFO     | mean x: 1764624607.7156863
[2025-12-01 20:08:31] 2025-12-02 01:07:27,059 | INFO     | mean y: 3459078.06127451
[2025-12-01 20:08:31] 2025-12-02 01:07:27,059 | INFO     | intersect: -46825621926.062416
[2025-12-01 20:08:31] 2025-12-02 01:07:27,060 | INFO     | chi2: 2.254417616546876
[2025-12-01 20:08:31] 2025-12-02 01:07:27,060 | INFO     | current chi2=2.254417616546876 (change=25.053757713173834 %)
[2025-12-01 20:08:31] 2025-12-02 01:07:27,060 | INFO     | sum of square deviations: 20295186115.64764
[2025-12-01 20:08:31] 2025-12-02 01:07:27,064 | INFO     | sum of deviations: 554311558448.1864
[2025-12-01 20:08:31] 2025-12-02 01:07:27,064 | INFO     | mean x: 1764624455.2133994
[2025-12-01 20:08:31] 2025-12-02 01:07:27,064 | INFO     | mean y: 3458151.5210918114
[2025-12-01 20:08:31] 2025-12-02 01:07:27,064 | INFO     | intersect: -48192785345.40175
[2025-12-01 20:08:31] 2025-12-02 01:07:27,065 | INFO     | chi2: 2.2211907941998668
[2025-12-01 20:08:31] 2025-12-02 01:07:27,065 | INFO     | current chi2=2.2211907941998668 (change=1.4738539169997766 %)
[2025-12-01 20:08:31] 2025-12-02 01:07:27,065 | INFO     | right removable region: 402
[2025-12-01 20:08:31] 2025-12-02 01:07:27,065 | INFO     | sum of square deviations: 21843734069.249405
[2025-12-01 20:08:31] 2025-12-02 01:07:27,069 | INFO     | sum of deviations: 199058470907.01703
[2025-12-01 20:08:31] 2025-12-02 01:07:27,069 | INFO     | mean x: 1764625065.2130752
[2025-12-01 20:08:31] 2025-12-02 01:07:27,069 | INFO     | mean y: 3437812.033898305
[2025-12-01 20:08:31] 2025-12-02 01:07:27,069 | INFO     | intersect: -16077309467.342777
[2025-12-01 20:08:31] 2025-12-02 01:07:27,070 | INFO     | chi2: 4.20687533554167
[2025-12-01 20:08:31] 2025-12-02 01:07:27,070 | INFO     | current chi2=4.20687533554167 (change=32.762701431014065 %)
[2025-12-01 20:08:31] 2025-12-02 01:07:27,071 | INFO     | sum of square deviations: 21059941225.448532
[2025-12-01 20:08:31] 2025-12-02 01:07:27,074 | INFO     | sum of deviations: 167241838985.36777
[2025-12-01 20:08:31] 2025-12-02 01:07:27,074 | INFO     | mean x: 1764625217.7132354
[2025-12-01 20:08:31] 2025-12-02 01:07:27,074 | INFO     | mean y: 3443995.8578431373
[2025-12-01 20:08:31] 2025-12-02 01:07:27,075 | INFO     | intersect: -14009850883.31773
[2025-12-01 20:08:31] 2025-12-02 01:07:27,075 | INFO     | chi2: 4.152839354290562
[2025-12-01 20:08:31] 2025-12-02 01:07:27,075 | INFO     | current chi2=4.152839354290562 (change=1.2844683272305757 %)
[2025-12-01 20:08:31] 2025-12-02 01:07:27,075 | INFO     | left removable region: 20
[2025-12-01 20:08:31] 2025-12-02 01:07:27,076 | INFO     | sum of square deviations: 17284921055.46583
[2025-12-01 20:08:31] 2025-12-02 01:07:27,079 | INFO     | sum of deviations: 350078711226.31366
[2025-12-01 20:08:31] 2025-12-02 01:07:27,079 | INFO     | mean x: 1764625034.7172775
[2025-12-01 20:08:31] 2025-12-02 01:07:27,079 | INFO     | mean y: 3499750.22513089
[2025-12-01 20:08:31] 2025-12-02 01:07:27,079 | INFO     | intersect: -35736186648.64138
[2025-12-01 20:08:31] 2025-12-02 01:07:27,080 | INFO     | chi2: 0.06070490276090783
[2025-12-01 20:08:31] 2025-12-02 01:07:27,080 | INFO     | current memory leak: 20.25 B/s (using 382 data points, chi2=0.06)
[2025-12-01 20:08:31] 2025-12-02 01:07:27,080 | INFO     | could have reported an average CPU frequency of 2382 MHz (18 samples)
[2025-12-01 20:08:31] 2025-12-02 01:07:27,081 | INFO     | ..............................
[2025-12-01 20:08:31] 2025-12-02 01:07:27,081 | INFO     | . Timing measurements:
[2025-12-01 20:08:31] 2025-12-02 01:07:27,081 | INFO     | . get job = 0 s
[2025-12-01 20:08:31] 2025-12-02 01:07:27,081 | INFO     | . initial setup = 2 s
[2025-12-01 20:08:31] 2025-12-02 01:07:27,081 | INFO     | . payload setup = 7 s
[2025-12-01 20:08:31] 2025-12-02 01:07:27,081 | INFO     | . stage-in = 0 s
[2025-12-01 20:08:31] 2025-12-02 01:07:27,081 | INFO     | . payload execution = 25445 s
[2025-12-01 20:08:31] 2025-12-02 01:07:27,081 | INFO     | . stage-out = 3 s
[2025-12-01 20:08:31] 2025-12-02 01:07:27,082 | INFO     | . log creation = 0 s
[2025-12-01 20:08:31] 2025-12-02 01:07:27,082 | INFO     | ..............................
[2025-12-01 20:08:31] 2025-12-02 01:07:27,162 | INFO     | 
[2025-12-01 20:08:31] 2025-12-02 01:07:27,162 | INFO     | job summary report
[2025-12-01 20:08:31] 2025-12-02 01:07:27,162 | INFO     | --------------------------------------------------
[2025-12-01 20:08:31] 2025-12-02 01:07:27,162 | INFO     | PanDA job id: 6895331128
[2025-12-01 20:08:31] 2025-12-02 01:07:27,162 | INFO     | task id: 47556137
[2025-12-01 20:08:31] 2025-12-02 01:07:27,163 | INFO     | errors: (none)
[2025-12-01 20:08:31] 2025-12-02 01:07:27,163 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 20:08:31] 2025-12-02 01:07:27,163 | INFO     | pilot state: finished 
[2025-12-01 20:08:31] 2025-12-02 01:07:27,163 | INFO     | transexitcode: 0
[2025-12-01 20:08:31] 2025-12-02 01:07:27,163 | INFO     | exeerrorcode: 0
[2025-12-01 20:08:31] 2025-12-02 01:07:27,163 | INFO     | exeerrordiag: 
[2025-12-01 20:08:31] 2025-12-02 01:07:27,164 | INFO     | exitcode: 0
[2025-12-01 20:08:31] 2025-12-02 01:07:27,164 | INFO     | exitmsg: OK
[2025-12-01 20:08:31] 2025-12-02 01:07:27,164 | INFO     | cpuconsumptiontime: 291438 s
[2025-12-01 20:08:31] 2025-12-02 01:07:27,164 | INFO     | nevents: 1000
[2025-12-01 20:08:31] 2025-12-02 01:07:27,164 | INFO     | neventsw: 0
[2025-12-01 20:08:31] 2025-12-02 01:07:27,164 | INFO     | pid: 890
[2025-12-01 20:08:31] 2025-12-02 01:07:27,164 | INFO     | pgrp: 890
[2025-12-01 20:08:31] 2025-12-02 01:07:27,165 | INFO     | corecount: 12
[2025-12-01 20:08:31] 2025-12-02 01:07:27,165 | INFO     | event service: False
[2025-12-01 20:08:31] 2025-12-02 01:07:27,165 | INFO     | sizes: {0: 2283487, 1: 2284343, 6: 2284605, 12: 2284633, 25457: 2321783, 25461: 2330961, 25466: 2331151}
[2025-12-01 20:08:31] 2025-12-02 01:07:27,165 | INFO     | --------------------------------------------------
[2025-12-01 20:08:31] 2025-12-02 01:07:27,165 | INFO     | 
[2025-12-01 20:08:31] 2025-12-02 01:07:27,166 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-01 20:08:31] 2025-12-02 01:07:27,192 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 20:08:31] 2025-12-02 01:07:27,193 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 20:08:31] 2025-12-02 01:07:27,193 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 20:08:31] 2025-12-02 01:07:27,193 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 20:08:31] 2025-12-02 01:07:27,193 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 20:08:31] 2025-12-02 01:07:27,193 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 20:08:31] 2025-12-02 01:07:27,193 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 20:08:31] 2025-12-02 01:07:27,194 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 20:08:31] 2025-12-02 01:07:27,194 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 20:08:31] 2025-12-02 01:07:27,194 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 20:08:31] 2025-12-02 01:07:27,194 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 20:08:31] 2025-12-02 01:07:27,194 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 20:08:31] 2025-12-02 01:07:27,195 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 20:08:31] 2025-12-02 01:07:27,195 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 20:08:31] 2025-12-02 01:07:27,195 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 20:08:31] 2025-12-02 01:07:27,195 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 20:08:31] 2025-12-02 01:07:27,195 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 20:08:31] 2025-12-02 01:07:27,195 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 20:08:31] 2025-12-02 01:07:27,196 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 20:08:31] 2025-12-02 01:07:27,196 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 20:08:31] 2025-12-02 01:07:27,196 | INFO     | job 6895331128 has completed (purged errors)
[2025-12-01 20:08:31] 2025-12-02 01:07:27,196 | INFO     | overall cleanup function is called
[2025-12-01 20:08:31] 2025-12-02 01:07:28,212 | INFO     | --- collectZombieJob: --- 10, [890]
[2025-12-01 20:08:31] 2025-12-02 01:07:28,212 | INFO     | zombie collector waiting for pid 890
[2025-12-01 20:08:31] 2025-12-02 01:07:28,212 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 20:08:31] 2025-12-02 01:07:28,212 | INFO     | collected zombie processes
[2025-12-01 20:08:31] 2025-12-02 01:07:28,213 | INFO     | will attempt to kill all subprocesses of pid=890
[2025-12-01 20:08:31] 2025-12-02 01:07:28,305 | INFO     | process IDs to be killed: [890] (in reverse order)
[2025-12-01 20:08:31] 2025-12-02 01:07:28,359 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 20:08:31] 2025-12-02 01:07:28,359 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 20:08:31] 2025-12-02 01:07:28,363 | INFO     | did not find any defunct processes belonging to 890
[2025-12-01 20:08:31] 2025-12-02 01:07:28,366 | INFO     | did not find any defunct processes belonging to 890
[2025-12-01 20:08:31] 2025-12-02 01:07:28,369 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 20:08:31] 2025-12-02 01:07:28,369 | INFO     | ready for new job
[2025-12-01 20:08:31] 2025-12-02 01:07:28,369 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 20:08:31] 2025-12-02 01:07:28,371 | INFO     | ***************************************
[2025-12-01 20:08:31] 2025-12-02 01:07:28,371 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 20:08:31] 2025-12-02 01:07:28,371 | INFO     | ***************************************
[2025-12-01 20:08:31] 2025-12-02 01:07:28,371 | INFO     | 
[2025-12-01 20:08:31] 2025-12-02 01:07:28,372 | INFO     | architecture information:
[2025-12-01 20:08:31] 2025-12-02 01:07:28,373 | INFO     | executing command: cat /etc/os-release
[2025-12-01 20:08:31] 2025-12-02 01:07:28,388 | INFO     | cat /etc/os-release:
[2025-12-01 20:08:31] NAME="CentOS Linux"
[2025-12-01 20:08:31] VERSION="7 (Core)"
[2025-12-01 20:08:31] ID="centos"
[2025-12-01 20:08:31] ID_LIKE="rhel fedora"
[2025-12-01 20:08:31] VERSION_ID="7"
[2025-12-01 20:08:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 20:08:31] ANSI_COLOR="0;31"
[2025-12-01 20:08:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 20:08:31] HOME_URL="https://www.centos.org/"
[2025-12-01 20:08:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 20:08:31] 
[2025-12-01 20:08:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 20:08:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 20:08:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 20:08:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 20:08:31] 
[2025-12-01 20:08:31] 2025-12-02 01:07:28,388 | INFO     | ***************************************
[2025-12-01 20:08:31] 2025-12-02 01:07:28,891 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-01 20:08:31] 2025-12-02 01:07:28,907 | INFO     | sufficient remaining disk space (28249686016 B)
[2025-12-01 20:08:31] 2025-12-02 01:07:28,908 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 20:08:31] 2025-12-02 01:07:28,908 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 20:08:31] 2025-12-02 01:07:28,908 | INFO     | update_server=False
[2025-12-01 20:08:31] 2025-12-02 01:07:28,908 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 20:08:31] 2025-12-02 01:07:28,909 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 20:08:31] 2025-12-02 01:07:28,909 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 20:08:31] 2025-12-02 01:07:29,173 | INFO     | all data control threads have been joined
[2025-12-01 20:08:31] 2025-12-02 01:07:29,271 | INFO     | all job control threads have been joined
[2025-12-01 20:08:31] 2025-12-02 01:07:29,588 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 20:08:31] 2025-12-02 01:07:29,588 | INFO     | aborting loop
[2025-12-01 20:08:31] 2025-12-02 01:07:29,914 | INFO     | [job] retrieve thread has finished
[2025-12-01 20:08:31] 2025-12-02 01:07:29,914 | INFO     | [job] queue monitor thread has finished
[2025-12-01 20:08:31] 2025-12-02 01:07:29,921 | INFO     | all payload control threads have been joined
[2025-12-01 20:08:31] 2025-12-02 01:07:30,178 | INFO     | [data] control thread has finished
[2025-12-01 20:08:31] 2025-12-02 01:07:30,246 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 20:08:31] 2025-12-02 01:07:30,276 | INFO     | [job] control thread has finished
[2025-12-01 20:08:31] 2025-12-02 01:07:30,386 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 20:08:31] 2025-12-02 01:07:30,416 | INFO     | [data] copytool_in thread has finished
[2025-12-01 20:08:31] 2025-12-02 01:07:30,589 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 20:08:31] 2025-12-02 01:07:30,589 | INFO     | [job] job monitor thread has finished
[2025-12-01 20:08:31] 2025-12-02 01:07:30,590 | INFO     | [job] validate thread has finished
[2025-12-01 20:08:31] 2025-12-02 01:07:30,598 | INFO     | [payload] validate_post thread has finished
[2025-12-01 20:08:31] 2025-12-02 01:07:30,800 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 20:08:31] 2025-12-02 01:07:30,927 | INFO     | [payload] control thread has finished
[2025-12-01 20:08:31] 2025-12-02 01:07:30,995 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 20:08:31] 2025-12-02 01:07:31,492 | INFO     | [payload] failed_post thread has finished
[2025-12-01 20:08:31] 2025-12-02 01:07:32,252 | INFO     | [data] copytool_out thread has finished
[2025-12-01 20:08:31] 2025-12-02 01:07:32,915 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 20:08:31] 2025-12-02 01:07:59,447 | INFO     | PID=26942 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-01 20:08:31] 2025-12-02 01:07:59,448 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 20:08:31] 2025-12-02 01:07:59,448 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 20:08:31] 2025-12-02 01:07:59,448 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 20:08:31] 2025-12-02 01:08:26,311 | INFO     | [monitor] cgroup control has ended
[2025-12-01 20:08:31] 2025-12-02 01:08:26,331 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140623228991296)>', '<ExcThread(monitor, started 140622631515904)>']
[2025-12-01 20:08:31] 2025-12-02 01:08:26,583 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 20:08:31] 2025-12-02 01:08:26,583 | INFO     | [monitor] control thread has ended
[2025-12-01 20:08:31] 2025-12-02 01:08:31,357 | INFO     | all workflow threads have been joined
[2025-12-01 20:08:31] 2025-12-02 01:08:31,362 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 20:08:31] 2025-12-02 01:08:31,363 | INFO     | traces error code: 0
[2025-12-01 20:08:31] 2025-12-02 01:08:31,363 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 20:08:31] 2025-12-02 01:08:31,451 [wrapper] ==== pilot stdout END ====
[2025-12-01 20:08:31] 2025-12-02 01:08:31,455 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 20:08:31] 2025-12-02 01:08:31,459 [wrapper] pilotpid: 26942
[2025-12-01 20:08:31] 2025-12-02 01:08:31,463 [wrapper] Pilot exit status: 0
[2025-12-01 20:08:31] 2025-12-02 01:08:31,477 [wrapper] pandaids: 6895331128
[2025-12-01 20:08:31] 2025-12-02 01:08:31,521 [wrapper] cleanup supervisor_pilot 16350 26943
[2025-12-01 20:08:31] 2025-12-02 01:08:31,525 [wrapper] Test setup, not cleaning
[2025-12-01 20:08:31] 2025-12-02 01:08:31,529 [wrapper] apfmon messages muted
[2025-12-01 20:08:31] 2025-12-02 01:08:31,533 [wrapper] ==== wrapper stdout END ====
[2025-12-01 20:08:31] 2025-12-02 01:08:31,536 [wrapper] ==== wrapper stderr END ====
[2025-12-01 20:08:31]  *** Error codes and diagnostics ***
[2025-12-01 20:08:31]     "exeErrorCode": 0,
[2025-12-01 20:08:31]     "exeErrorDiag": "",
[2025-12-01 20:08:31]     "pilotErrorCode": 0,
[2025-12-01 20:08:31]     "pilotErrorDiag": "",
[2025-12-01 20:08:31]  *** Listing of results directory ***
[2025-12-01 20:08:31] total 1306656
[2025-12-01 20:08:31] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 17:05 pilot3.tar.gz
[2025-12-01 20:08:31] -rwx------ 1 boincer umatlas     36292 Nov 21 17:31 runpilot2-wrapper.sh
[2025-12-01 20:08:31] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 17:31 queuedata.json
[2025-12-01 20:08:31] -rw-r--r-- 1 boincer umatlas       100 Dec  1 13:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 20:08:31] -rwxr-xr-x 1 boincer umatlas      7986 Dec  1 13:02 run_atlas
[2025-12-01 20:08:31] -rw-r--r-- 1 boincer umatlas       105 Dec  1 13:02 job.xml
[2025-12-01 20:08:31] -rw-r--r-- 2 boincer umatlas 411224081 Dec  1 13:02 EVNT.47483658._000159.pool.root.1
[2025-12-01 20:08:31] drwxrwx--x 2 boincer umatlas      4096 Dec  1 13:02 shared
[2025-12-01 20:08:31] -rw-r--r-- 2 boincer umatlas    590103 Dec  1 13:02 input.tar.gz
[2025-12-01 20:08:31] -rw-r--r-- 2 boincer umatlas     15847 Dec  1 13:02 start_atlas.sh
[2025-12-01 20:08:31] -rw-r--r-- 1 boincer umatlas         0 Dec  1 13:02 boinc_lockfile
[2025-12-01 20:08:31] -rw-r--r-- 1 boincer umatlas      2786 Dec  1 13:02 pandaJob.out
[2025-12-01 20:08:31] -rw------- 1 boincer umatlas        57 Dec  1 13:02 setup.sh.local
[2025-12-01 20:08:31] -rw------- 1 boincer umatlas    991946 Dec  1 13:02 agis_schedconf.cvmfs.json
[2025-12-01 20:08:31] drwx------ 5 boincer umatlas      4096 Dec  1 13:02 pilot3
[2025-12-01 20:08:31] -rw-r--r-- 1 boincer umatlas       532 Dec  1 19:56 boinc_task_state.xml
[2025-12-01 20:08:31] -rw-r--r-- 1 boincer umatlas      5955 Dec  1 20:04 init_data.xml
[2025-12-01 20:08:31] -rw------- 1 boincer umatlas 911398080 Dec  1 20:06 HITS.47556137._001590.pool.root.1
[2025-12-01 20:08:31] -rw------- 1 boincer umatlas      1064 Dec  1 20:07 memory_monitor_summary.json
[2025-12-01 20:08:31] -rw------- 1 boincer umatlas   1516240 Dec  1 20:07 agis_ddmendpoints.agis.ALL.json
[2025-12-01 20:08:31] -rw------- 1 boincer umatlas   2176436 Dec  1 20:07 log.47556137._001590.job.log.tgz.1
[2025-12-01 20:08:31] -rw------- 1 boincer umatlas      8662 Dec  1 20:07 heartbeat.json
[2025-12-01 20:08:31] -rw------- 1 boincer umatlas        95 Dec  1 20:07 pilot_heartbeat.json
[2025-12-01 20:08:31] -rw-r--r-- 1 boincer umatlas        29 Dec  1 20:08 wrapper_checkpoint.txt
[2025-12-01 20:08:31] -rw-r--r-- 1 boincer umatlas      8192 Dec  1 20:08 boinc_mmap_file
[2025-12-01 20:08:31] -rw------- 1 boincer umatlas      4746 Dec  1 20:08 pilotlog.txt
[2025-12-01 20:08:31] -rw------- 1 boincer umatlas   3562541 Dec  1 20:08 log.47556137._001590.job.log.1
[2025-12-01 20:08:31] -rw------- 1 boincer umatlas       353 Dec  1 20:08 output.list
[2025-12-01 20:08:31] -rw-r--r-- 1 boincer umatlas       620 Dec  1 20:08 runtime_log
[2025-12-01 20:08:31] -rw------- 1 boincer umatlas   5754880 Dec  1 20:08 result.tar.gz
[2025-12-01 20:08:31] -rw-r--r-- 1 boincer umatlas      9340 Dec  1 20:08 runtime_log.err
[2025-12-01 20:08:31] -rw------- 1 boincer umatlas       669 Dec  1 20:08 LVpLDmLqog8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXqHKDm55vM3n.diag
[2025-12-01 20:08:31] -rw-r--r-- 1 boincer umatlas     21075 Dec  1 20:08 stderr.txt
[2025-12-01 20:08:31] HITS file was successfully produced:
[2025-12-01 20:08:31] -rw------- 1 boincer umatlas 911398080 Dec  1 20:06 shared/HITS.pool.root.1
[2025-12-01 20:08:31]  *** Contents of shared directory: ***
[2025-12-01 20:08:31] total 1297848
[2025-12-01 20:08:31] -rw-r--r-- 2 boincer umatlas 411224081 Dec  1 13:02 ATLAS.root_0
[2025-12-01 20:08:31] -rw-r--r-- 2 boincer umatlas    590103 Dec  1 13:02 input.tar.gz
[2025-12-01 20:08:31] -rw-r--r-- 2 boincer umatlas     15847 Dec  1 13:02 start_atlas.sh
[2025-12-01 20:08:31] -rw------- 1 boincer umatlas 911398080 Dec  1 20:06 HITS.pool.root.1
[2025-12-01 20:08:31] -rw------- 1 boincer umatlas   5754880 Dec  1 20:08 result.tar.gz
20:08:33 (23263): run_atlas exited; CPU time 284864.078695
20:08:33 (23263): called boinc_finish(0)

</stderr_txt>
]]>

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