Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
09:01:05 (1567959): wrapper (7.7.26015): starting
09:01:05 (1567959): wrapper: running run_atlas (--nthreads 10)
[2025-12-02 09:01:05] Arguments: --nthreads 10
[2025-12-02 09:01:05] Threads: 10
[2025-12-02 09:01:05] Checking for CVMFS
[2025-12-02 09:01:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 09:01:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 09:01:06] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 09:01:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 09:01:07] 2.13.3.0 8606 1401 48044 153562 1 82 4084957 4096001 3956 130560 0 4613625 99.998 51549 1010 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-02 09:01:07] CVMFS is ok
[2025-12-02 09:01:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 09:01:07] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-02 09:01:07] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-02 09:01:07] Further information can be found at the LHC@home message board.
[2025-12-02 09:01:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 09:01:07] Checking for apptainer binary...
[2025-12-02 09:01:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 09:01:07] Running /usr/bin/apptainer --version
[2025-12-02 09:01:07] apptainer version 1.4.2
[2025-12-02 09:01:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 09:01:07] 3950x-linux
[2025-12-02 09:01:07] apptainer works
[2025-12-02 09:01:07] Set ATHENA_PROC_NUMBER=10
[2025-12-02 09:01:07] Set ATHENA_CORE_NUMBER=10
[2025-12-02 09:01:07] Starting ATLAS job with PandaID=6891595476
[2025-12-02 09:01:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc234/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 05:25:40]  *** The last 200 lines of the pilot log: ***
[2025-12-03 05:25:40] 2025-12-03 13:24:46,396 | INFO     | time since job start (73396s) is within the limit (172800.0s)
[2025-12-03 05:25:40] 2025-12-03 13:24:48,388 | INFO     | monitor loop #4781: job 0:6891595476 is in state 'finished'
[2025-12-03 05:25:40] 2025-12-03 13:24:48,389 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 05:25:40] 2025-12-03 13:24:48,408 | INFO     | time since job start (73398s) is within the limit (172800.0s)
[2025-12-03 05:25:40] 2025-12-03 13:24:50,418 | INFO     | time since job start (73400s) is within the limit (172800.0s)
[2025-12-03 05:25:40] 2025-12-03 13:24:50,892 | INFO     | monitor loop #4782: job 0:6891595476 is in state 'finished'
[2025-12-03 05:25:40] 2025-12-03 13:24:50,892 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 05:25:40] 2025-12-03 13:24:52,425 | INFO     | time since job start (73402s) is within the limit (172800.0s)
[2025-12-03 05:25:40] 2025-12-03 13:24:53,394 | INFO     | monitor loop #4783: job 0:6891595476 is in state 'finished'
[2025-12-03 05:25:40] 2025-12-03 13:24:53,395 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 05:25:40] 2025-12-03 13:24:54,430 | INFO     | time since job start (73404s) is within the limit (172800.0s)
[2025-12-03 05:25:40] 2025-12-03 13:24:55,902 | INFO     | monitor loop #4784: job 0:6891595476 is in state 'finished'
[2025-12-03 05:25:40] 2025-12-03 13:24:55,903 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 05:25:40] 2025-12-03 13:24:56,439 | INFO     | time since job start (73406s) is within the limit (172800.0s)
[2025-12-03 05:25:40] 2025-12-03 13:24:58,405 | INFO     | monitor loop #4785: job 0:6891595476 is in state 'finished'
[2025-12-03 05:25:40] 2025-12-03 13:24:58,406 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 05:25:40] 2025-12-03 13:24:58,446 | INFO     | time since job start (73408s) is within the limit (172800.0s)
[2025-12-03 05:25:40] 2025-12-03 13:24:58,803 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-03 05:25:40] 2025-12-03 13:24:58,810 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3400.12390625
[2025-12-03 05:25:40] 2025-12-03 13:24:58,833 | INFO     | using path: /var/lib/multiboinc/boinc234/slots/2/PanDA_Pilot-6891595476/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 05:25:40] 2025-12-03 13:24:58,833 | INFO     | extracted standard info from prmon json
[2025-12-03 05:25:40] 2025-12-03 13:24:58,833 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 05:25:40] 2025-12-03 13:24:58,834 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 05:25:40] 2025-12-03 13:24:58,886 | INFO     | fitting pss+swap vs Time
[2025-12-03 05:25:40] 2025-12-03 13:24:58,891 | INFO     | sum of square deviations: 539856972975.48785
[2025-12-03 05:25:40] 2025-12-03 13:24:58,968 | INFO     | sum of deviations: 1219596926988.8313
[2025-12-03 05:25:40] 2025-12-03 13:24:58,968 | INFO     | mean x: 1764731594.9459684
[2025-12-03 05:25:40] 2025-12-03 13:24:58,968 | INFO     | mean y: 3145265.120532003
[2025-12-03 05:25:40] 2025-12-03 13:24:58,968 | INFO     | intersect: -3983579622.943339
[2025-12-03 05:25:40] 2025-12-03 13:24:58,975 | INFO     | chi2: 14.262229107299671
[2025-12-03 05:25:40] 2025-12-03 13:24:58,977 | INFO     | sum of square deviations: 533154663049.414
[2025-12-03 05:25:40] 2025-12-03 13:24:59,047 | INFO     | sum of deviations: 1680680689814.8564
[2025-12-03 05:25:40] 2025-12-03 13:24:59,051 | INFO     | mean x: 1764731442.4582639
[2025-12-03 05:25:40] 2025-12-03 13:24:59,051 | INFO     | mean y: 3155752.787145242
[2025-12-03 05:25:40] 2025-12-03 13:24:59,051 | INFO     | intersect: -5559864255.487321
[2025-12-03 05:25:40] 2025-12-03 13:24:59,052 | INFO     | chi2: 10.74745358100956
[2025-12-03 05:25:40] 2025-12-03 13:24:59,052 | INFO     | current chi2=10.74745358100956 (change=24.643942400919528 %)
[2025-12-03 05:25:40] 2025-12-03 13:24:59,052 | INFO     | right removable region: 1197
[2025-12-03 05:25:40] 2025-12-03 13:24:59,053 | INFO     | sum of square deviations: 533152574353.3283
[2025-12-03 05:25:40] 2025-12-03 13:24:59,133 | INFO     | sum of deviations: 823924270116.4635
[2025-12-03 05:25:40] 2025-12-03 13:24:59,133 | INFO     | mean x: 1764731747.457429
[2025-12-03 05:25:40] 2025-12-03 13:24:59,133 | INFO     | mean y: 3154257.734557596
[2025-12-03 05:25:40] 2025-12-03 13:24:59,133 | INFO     | intersect: -2724030017.3086724
[2025-12-03 05:25:40] 2025-12-03 13:24:59,134 | INFO     | chi2: 11.658727678502615
[2025-12-03 05:25:40] 2025-12-03 13:24:59,134 | INFO     | current chi2=11.658727678502615 (change=18.254519747299085 %)
[2025-12-03 05:25:40] 2025-12-03 13:24:59,134 | INFO     | left removable region: 10
[2025-12-03 05:25:40] 2025-12-03 13:24:59,142 | INFO     | sum of square deviations: 518601507978.5546
[2025-12-03 05:25:40] 2025-12-03 13:24:59,228 | INFO     | sum of deviations: 1273386873078.3665
[2025-12-03 05:25:40] 2025-12-03 13:24:59,229 | INFO     | mean x: 1764731716.9806235
[2025-12-03 05:25:40] 2025-12-03 13:24:59,229 | INFO     | mean y: 3168915.798652064
[2025-12-03 05:25:40] 2025-12-03 13:24:59,229 | INFO     | intersect: -4329996661.886285
[2025-12-03 05:25:40] 2025-12-03 13:24:59,230 | INFO     | chi2: 7.475424288340748
[2025-12-03 05:25:40] 2025-12-03 13:24:59,230 | INFO     | current memory leak: 2.46 B/s (using 1187 data points, chi2=7.48)
[2025-12-03 05:25:40] 2025-12-03 13:24:59,237 | INFO     | could have reported an average CPU frequency of 3400 MHz (44 samples)
[2025-12-03 05:25:40] 2025-12-03 13:24:59,237 | INFO     | ..............................
[2025-12-03 05:25:40] 2025-12-03 13:24:59,237 | INFO     | . Timing measurements:
[2025-12-03 05:25:40] 2025-12-03 13:24:59,237 | INFO     | . get job = 0 s
[2025-12-03 05:25:40] 2025-12-03 13:24:59,238 | INFO     | . initial setup = 4 s
[2025-12-03 05:25:40] 2025-12-03 13:24:59,238 | INFO     | . payload setup = 11 s
[2025-12-03 05:25:40] 2025-12-03 13:24:59,238 | INFO     | . stage-in = 0 s
[2025-12-03 05:25:40] 2025-12-03 13:24:59,238 | INFO     | . payload execution = 73344 s
[2025-12-03 05:25:40] 2025-12-03 13:24:59,238 | INFO     | . stage-out = 8 s
[2025-12-03 05:25:40] 2025-12-03 13:24:59,238 | INFO     | . log creation = 2 s
[2025-12-03 05:25:40] 2025-12-03 13:24:59,238 | INFO     | ..............................
[2025-12-03 05:25:40] 2025-12-03 13:24:59,529 | INFO     | 
[2025-12-03 05:25:40] 2025-12-03 13:24:59,529 | INFO     | job summary report
[2025-12-03 05:25:40] 2025-12-03 13:24:59,529 | INFO     | --------------------------------------------------
[2025-12-03 05:25:40] 2025-12-03 13:24:59,529 | INFO     | PanDA job id: 6891595476
[2025-12-03 05:25:40] 2025-12-03 13:24:59,530 | INFO     | task id: 47493068
[2025-12-03 05:25:40] 2025-12-03 13:24:59,530 | INFO     | errors: (none)
[2025-12-03 05:25:40] 2025-12-03 13:24:59,530 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 05:25:40] 2025-12-03 13:24:59,530 | INFO     | pilot state: finished 
[2025-12-03 05:25:40] 2025-12-03 13:24:59,530 | INFO     | transexitcode: 0
[2025-12-03 05:25:40] 2025-12-03 13:24:59,530 | INFO     | exeerrorcode: 0
[2025-12-03 05:25:40] 2025-12-03 13:24:59,530 | INFO     | exeerrordiag: 
[2025-12-03 05:25:40] 2025-12-03 13:24:59,530 | INFO     | exitcode: 0
[2025-12-03 05:25:40] 2025-12-03 13:24:59,530 | INFO     | exitmsg: OK
[2025-12-03 05:25:40] 2025-12-03 13:24:59,530 | INFO     | cpuconsumptiontime: 204116 s
[2025-12-03 05:25:40] 2025-12-03 13:24:59,530 | INFO     | nevents: 1000
[2025-12-03 05:25:40] 2025-12-03 13:24:59,530 | INFO     | neventsw: 0
[2025-12-03 05:25:40] 2025-12-03 13:24:59,530 | INFO     | pid: 1578887
[2025-12-03 05:25:40] 2025-12-03 13:24:59,530 | INFO     | pgrp: 1578887
[2025-12-03 05:25:40] 2025-12-03 13:24:59,530 | INFO     | corecount: 10
[2025-12-03 05:25:40] 2025-12-03 13:24:59,530 | INFO     | event service: False
[2025-12-03 05:25:40] 2025-12-03 13:24:59,531 | INFO     | sizes: {0: 2284091, 1: 2284346, 2: 2284346, 11: 2284636, 12: 2284664, 73361: 2345387, 73370: 2354465, 73389: 2354655}
[2025-12-03 05:25:40] 2025-12-03 13:24:59,531 | INFO     | --------------------------------------------------
[2025-12-03 05:25:40] 2025-12-03 13:24:59,531 | INFO     | 
[2025-12-03 05:25:40] 2025-12-03 13:24:59,531 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc234/slots/2
[2025-12-03 05:25:40] 2025-12-03 13:24:59,596 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 05:25:40] 2025-12-03 13:24:59,596 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 05:25:40] 2025-12-03 13:24:59,596 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 05:25:40] 2025-12-03 13:24:59,596 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 05:25:40] 2025-12-03 13:24:59,596 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 05:25:40] 2025-12-03 13:24:59,597 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 05:25:40] 2025-12-03 13:24:59,597 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 05:25:40] 2025-12-03 13:24:59,597 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 05:25:40] 2025-12-03 13:24:59,597 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 05:25:40] 2025-12-03 13:24:59,597 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 05:25:40] 2025-12-03 13:24:59,597 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 05:25:40] 2025-12-03 13:24:59,597 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 05:25:40] 2025-12-03 13:24:59,597 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 05:25:40] 2025-12-03 13:24:59,597 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 05:25:40] 2025-12-03 13:24:59,597 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 05:25:40] 2025-12-03 13:24:59,597 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 05:25:40] 2025-12-03 13:24:59,597 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 05:25:40] 2025-12-03 13:24:59,597 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 05:25:40] 2025-12-03 13:24:59,597 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 05:25:40] 2025-12-03 13:24:59,597 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 05:25:40] 2025-12-03 13:24:59,598 | INFO     | job 6891595476 has completed (purged errors)
[2025-12-03 05:25:40] 2025-12-03 13:24:59,598 | INFO     | overall cleanup function is called
[2025-12-03 05:25:40] 2025-12-03 13:25:00,651 | INFO     | --- collectZombieJob: --- 10, [1578887]
[2025-12-03 05:25:40] 2025-12-03 13:25:00,652 | INFO     | zombie collector waiting for pid 1578887
[2025-12-03 05:25:40] 2025-12-03 13:25:00,652 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 05:25:40] 2025-12-03 13:25:00,652 | INFO     | collected zombie processes
[2025-12-03 05:25:40] 2025-12-03 13:25:00,652 | INFO     | will attempt to kill all subprocesses of pid=1578887
[2025-12-03 05:25:40] 2025-12-03 13:25:01,636 | INFO     | process IDs to be killed: [1578887] (in reverse order)
[2025-12-03 05:25:40] 2025-12-03 13:25:02,053 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 05:25:40] 2025-12-03 13:25:02,054 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 05:25:40] 2025-12-03 13:25:02,079 | INFO     | did not find any defunct processes belonging to 1578887
[2025-12-03 05:25:40] 2025-12-03 13:25:02,114 | INFO     | did not find any defunct processes belonging to 1578887
[2025-12-03 05:25:40] 2025-12-03 13:25:02,121 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 05:25:40] 2025-12-03 13:25:02,121 | INFO     | ready for new job
[2025-12-03 05:25:40] 2025-12-03 13:25:02,121 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 05:25:40] 2025-12-03 13:25:02,135 | INFO     | ***************************************
[2025-12-03 05:25:40] 2025-12-03 13:25:02,135 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 05:25:40] 2025-12-03 13:25:02,135 | INFO     | ***************************************
[2025-12-03 05:25:40] 2025-12-03 13:25:02,135 | INFO     | 
[2025-12-03 05:25:40] 2025-12-03 13:25:02,143 | INFO     | architecture information:
[2025-12-03 05:25:40] 2025-12-03 13:25:02,143 | INFO     | executing command: cat /etc/os-release
[2025-12-03 05:25:40] 2025-12-03 13:25:02,208 | INFO     | cat /etc/os-release:
[2025-12-03 05:25:40] NAME="CentOS Linux"
[2025-12-03 05:25:40] VERSION="7 (Core)"
[2025-12-03 05:25:40] ID="centos"
[2025-12-03 05:25:40] ID_LIKE="rhel fedora"
[2025-12-03 05:25:40] VERSION_ID="7"
[2025-12-03 05:25:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 05:25:40] ANSI_COLOR="0;31"
[2025-12-03 05:25:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 05:25:40] HOME_URL="https://www.centos.org/"
[2025-12-03 05:25:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 05:25:40] 
[2025-12-03 05:25:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 05:25:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 05:25:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 05:25:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 05:25:40] 
[2025-12-03 05:25:40] 2025-12-03 13:25:02,208 | INFO     | ***************************************
[2025-12-03 05:25:40] 2025-12-03 13:25:02,711 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc234/slots/2
[2025-12-03 05:25:40] 2025-12-03 13:25:02,763 | INFO     | sufficient remaining disk space (45599424512 B)
[2025-12-03 05:25:40] 2025-12-03 13:25:02,763 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 05:25:40] 2025-12-03 13:25:02,763 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 05:25:40] 2025-12-03 13:25:02,763 | INFO     | update_server=False
[2025-12-03 05:25:40] 2025-12-03 13:25:02,763 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 05:25:40] 2025-12-03 13:25:02,764 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 05:25:40] 2025-12-03 13:25:02,764 | INFO     | aborting loop
[2025-12-03 05:25:40] 2025-12-03 13:25:03,079 | INFO     | all job control threads have been joined
[2025-12-03 05:25:40] 2025-12-03 13:25:03,248 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 05:25:40] 2025-12-03 13:25:03,564 | INFO     | all data control threads have been joined
[2025-12-03 05:25:40] 2025-12-03 13:25:03,769 | INFO     | [job] job monitor thread has finished
[2025-12-03 05:25:40] 2025-12-03 13:25:03,775 | INFO     | [job] retrieve thread has finished
[2025-12-03 05:25:40] 2025-12-03 13:25:03,792 | INFO     | all payload control threads have been joined
[2025-12-03 05:25:40] 2025-12-03 13:25:03,937 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 05:25:40] 2025-12-03 13:25:04,029 | INFO     | [payload] failed_post thread has finished
[2025-12-03 05:25:40] 2025-12-03 13:25:04,085 | INFO     | [job] control thread has finished
[2025-12-03 05:25:40] 2025-12-03 13:25:04,455 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 05:25:40] 2025-12-03 13:25:04,544 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 05:25:40] 2025-12-03 13:25:04,570 | INFO     | [data] control thread has finished
[2025-12-03 05:25:40] 2025-12-03 13:25:04,607 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 05:25:40] 2025-12-03 13:25:04,797 | INFO     | [payload] control thread has finished
[2025-12-03 05:25:40] 2025-12-03 13:25:04,842 | INFO     | [payload] validate_post thread has finished
[2025-12-03 05:25:40] 2025-12-03 13:25:04,903 | INFO     | [job] validate thread has finished
[2025-12-03 05:25:40] 2025-12-03 13:25:04,903 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 05:25:40] 2025-12-03 13:25:05,061 | INFO     | [data] copytool_in thread has finished
[2025-12-03 05:25:40] 2025-12-03 13:25:05,091 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 05:25:40] 2025-12-03 13:25:05,253 | INFO     | [data] copytool_out thread has finished
[2025-12-03 05:25:40] 2025-12-03 13:25:05,552 | INFO     | [job] queue monitor thread has finished
[2025-12-03 05:25:40] 2025-12-03 13:25:08,612 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 05:25:40] 2025-12-03 13:25:32,210 | INFO     | PID=1572155 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 05:25:40] 2025-12-03 13:25:32,210 | INFO     | .. there are 12 such processes running
[2025-12-03 05:25:40] 2025-12-03 13:25:32,210 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 05:25:40] 2025-12-03 13:25:32,210 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 05:25:40] 2025-12-03 13:25:32,210 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 05:25:40] 2025-12-03 13:25:33,179 | INFO     | [monitor] cgroup control has ended
[2025-12-03 05:25:40] 2025-12-03 13:25:34,276 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123521764435776)>', '<ExcThread(monitor, started 123521271310080)>']
[2025-12-03 05:25:40] 2025-12-03 13:25:35,228 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 05:25:40] 2025-12-03 13:25:35,229 | INFO     | [monitor] control thread has ended
[2025-12-03 05:25:40] 2025-12-03 13:25:39,300 | INFO     | all workflow threads have been joined
[2025-12-03 05:25:40] 2025-12-03 13:25:39,301 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 05:25:40] 2025-12-03 13:25:39,301 | INFO     | traces error code: 0
[2025-12-03 05:25:40] 2025-12-03 13:25:39,301 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 05:25:40] 2025-12-03 13:25:39,779 [wrapper] ==== pilot stdout END ====
[2025-12-03 05:25:40] 2025-12-03 13:25:39,808 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 05:25:40] 2025-12-03 13:25:39,835 [wrapper] pilotpid: 1572155
[2025-12-03 05:25:40] 2025-12-03 13:25:39,858 [wrapper] Pilot exit status: 0
[2025-12-03 05:25:40] 2025-12-03 13:25:39,920 [wrapper] pandaids: 6891595476
[2025-12-03 05:25:40] 2025-12-03 13:25:40,125 [wrapper] cleanup supervisor_pilot 2895520 1572156
[2025-12-03 05:25:40] 2025-12-03 13:25:40,144 [wrapper] Test setup, not cleaning
[2025-12-03 05:25:40] 2025-12-03 13:25:40,159 [wrapper] apfmon messages muted
[2025-12-03 05:25:40] 2025-12-03 13:25:40,172 [wrapper] ==== wrapper stdout END ====
[2025-12-03 05:25:40] 2025-12-03 13:25:40,184 [wrapper] ==== wrapper stderr END ====
[2025-12-03 05:25:40]  *** Error codes and diagnostics ***
[2025-12-03 05:25:40]     "exeErrorCode": 0,
[2025-12-03 05:25:40]     "exeErrorDiag": "",
[2025-12-03 05:25:40]     "pilotErrorCode": 0,
[2025-12-03 05:25:40]     "pilotErrorDiag": "",
[2025-12-03 05:25:40]  *** Listing of results directory ***
[2025-12-03 05:25:40] total 1313604
[2025-12-03 05:25:40] -rw-r--r-- 1 root root    576529 Nov 18 10:36 pilot3.tar.gz
[2025-12-03 05:25:40] -rwx------ 1 4871 1028     36292 Nov 18 10:43 runpilot2-wrapper.sh
[2025-12-03 05:25:40] -rw-r--r-- 1 root root      5112 Nov 18 10:43 queuedata.json
[2025-12-03 05:25:40] -rw-r--r-- 1 root root       100 Dec  2 09:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 05:25:40] -rwxr-xr-x 1 root root      7986 Dec  2 09:01 run_atlas
[2025-12-03 05:25:40] -rw-r--r-- 1 root root       105 Dec  2 09:01 job.xml
[2025-12-03 05:25:40] -rw-r--r-- 2 root root 408457591 Dec  2 09:01 EVNT.47493065._000771.pool.root.1
[2025-12-03 05:25:40] drwxrwx--x 2 root root      4096 Dec  2 09:01 shared
[2025-12-03 05:25:40] -rw-r--r-- 2 root root    590094 Dec  2 09:01 input.tar.gz
[2025-12-03 05:25:40] -rw-r--r-- 2 root root     15120 Dec  2 09:01 start_atlas.sh
[2025-12-03 05:25:40] -rw-r--r-- 1 root root         0 Dec  2 09:01 boinc_setup_complete
[2025-12-03 05:25:40] -rw-r--r-- 1 root root         0 Dec  2 09:01 boinc_lockfile
[2025-12-03 05:25:40] -rw-r--r-- 1 root root      2773 Dec  2 09:01 pandaJob.out
[2025-12-03 05:25:40] -rw------- 1 root root    988852 Dec  2 09:01 agis_schedconf.cvmfs.json
[2025-12-03 05:25:40] drwxr-xr-x 5  320  320      4096 Dec  2 09:01 pilot3
[2025-12-03 05:25:40] -rw-r--r-- 1 root root      9238 Dec  2 09:15 init_data.xml
[2025-12-03 05:25:40] -rw-r--r-- 1 root root       533 Dec  3 04:46 boinc_task_state.xml
[2025-12-03 05:25:40] -rw------- 1 root root 907677788 Dec  3 05:22 HITS.47493068._006359.pool.root.1
[2025-12-03 05:25:40] -rw------- 1 root root      1052 Dec  3 05:24 memory_monitor_summary.json
[2025-12-03 05:25:40] -rw------- 1 root root   1516240 Dec  3 05:24 agis_ddmendpoints.agis.ALL.json
[2025-12-03 05:25:40] -rw------- 1 root root   2543108 Dec  3 05:24 log.47493068._006359.job.log.tgz.1
[2025-12-03 05:25:40] -rw------- 1 root root        95 Dec  3 05:24 pilot_heartbeat.json
[2025-12-03 05:25:40] -rw------- 1 root root      8602 Dec  3 05:24 heartbeat.json
[2025-12-03 05:25:40] -rw-r--r-- 1 root root        29 Dec  3 05:25 wrapper_checkpoint.txt
[2025-12-03 05:25:40] -rw-r--r-- 1 root root      8192 Dec  3 05:25 boinc_mmap_file
[2025-12-03 05:25:40] -rw------- 1 root root      4838 Dec  3 05:25 pilotlog.txt
[2025-12-03 05:25:40] -rw------- 1 root root   9995380 Dec  3 05:25 log.47493068._006359.job.log.1
[2025-12-03 05:25:40] -rw------- 1 root root       353 Dec  3 05:25 output.list
[2025-12-03 05:25:40] -rw-r--r-- 1 root root       620 Dec  3 05:25 runtime_log
[2025-12-03 05:25:40] -rw------- 1 root root  12554240 Dec  3 05:25 result.tar.gz
[2025-12-03 05:25:40] -rw-r--r-- 1 root root      8879 Dec  3 05:25 runtime_log.err
[2025-12-03 05:25:40] -rw------- 1 root root       662 Dec  3 05:25 kdMMDm6qff8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHJGKDmLmyYSo.diag
[2025-12-03 05:25:40] -rw-r--r-- 1 root root     21872 Dec  3 05:25 stderr.txt
[2025-12-03 05:25:40] HITS file was successfully produced:
[2025-12-03 05:25:40] -rw------- 1 root root 907677788 Dec  3 05:22 shared/HITS.pool.root.1
[2025-12-03 05:25:40]  *** Contents of shared directory: ***
[2025-12-03 05:25:40] total 1298160
[2025-12-03 05:25:40] -rw-r--r-- 2 root root 408457591 Dec  2 09:01 ATLAS.root_0
[2025-12-03 05:25:40] -rw-r--r-- 2 root root    590094 Dec  2 09:01 input.tar.gz
[2025-12-03 05:25:40] -rw-r--r-- 2 root root     15120 Dec  2 09:01 start_atlas.sh
[2025-12-03 05:25:40] -rw------- 1 root root 907677788 Dec  3 05:22 HITS.pool.root.1
[2025-12-03 05:25:40] -rw------- 1 root root  12554240 Dec  3 05:25 result.tar.gz
05:25:42 (1567959): run_atlas exited; CPU time 204515.583661
05:25:42 (1567959): called boinc_finish(0)

</stderr_txt>
]]>

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