Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
08:16:02 (1538647): wrapper (7.7.26015): starting
08:16:02 (1538647): wrapper: running run_atlas (--nthreads 10)
[2025-12-02 08:16:02] Arguments: --nthreads 10
[2025-12-02 08:16:02] Threads: 10
[2025-12-02 08:16:02] Checking for CVMFS
[2025-12-02 08:16:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 08:16:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 08:16:03] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 08:16:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 08:16:04] 2.13.3.0 8606 1355 47808 153561 2 49 4077244 4096000 2967 130560 0 4521772 99.998 49894 1028 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-02 08:16:04] CVMFS is ok
[2025-12-02 08:16:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 08:16:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-02 08:16:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-02 08:16:04] Further information can be found at the LHC@home message board.
[2025-12-02 08:16:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 08:16:04] Checking for apptainer binary...
[2025-12-02 08:16:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 08:16:04] Running /usr/bin/apptainer --version
[2025-12-02 08:16:04] apptainer version 1.4.2
[2025-12-02 08:16:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 08:16:04] 3950x-linux
[2025-12-02 08:16:04] apptainer works
[2025-12-02 08:16:04] Set ATHENA_PROC_NUMBER=10
[2025-12-02 08:16:04] Set ATHENA_CORE_NUMBER=10
[2025-12-02 08:16:04] Starting ATLAS job with PandaID=6898762185
[2025-12-02 08:16:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc234/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 03:10:21]  *** The last 200 lines of the pilot log: ***
[2025-12-03 03:10:21] 2025-12-03 11:09:44,848 | INFO     | monitor loop #4466: job 0:6898762185 is in state 'finished'
[2025-12-03 03:10:21] 2025-12-03 11:09:44,848 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 03:10:21] 2025-12-03 11:09:45,189 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-03 03:10:21] 2025-12-03 11:09:45,198 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3400.1265624999996
[2025-12-03 03:10:21] 2025-12-03 11:09:45,215 | INFO     | using path: /var/lib/multiboinc/boinc234/slots/1/PanDA_Pilot-6898762185/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 03:10:21] 2025-12-03 11:09:45,216 | INFO     | extracted standard info from prmon json
[2025-12-03 03:10:21] 2025-12-03 11:09:45,216 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 03:10:21] 2025-12-03 11:09:45,216 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 03:10:21] 2025-12-03 11:09:45,261 | INFO     | fitting pss+swap vs Time
[2025-12-03 03:10:21] 2025-12-03 11:09:45,262 | INFO     | sum of square deviations: 428699046938.56354
[2025-12-03 03:10:21] 2025-12-03 11:09:45,366 | INFO     | sum of deviations: 1104606414811.629
[2025-12-03 03:10:21] 2025-12-03 11:09:45,366 | INFO     | mean x: 1764726160.0359066
[2025-12-03 03:10:21] 2025-12-03 11:09:45,366 | INFO     | mean y: 3179602.9093357273
[2025-12-03 03:10:21] 2025-12-03 11:09:45,366 | INFO     | intersect: -4543898004.7554
[2025-12-03 03:10:21] 2025-12-03 11:09:45,367 | INFO     | chi2: 10.415506534997217
[2025-12-03 03:10:21] 2025-12-03 11:09:45,368 | INFO     | sum of square deviations: 422953935878.2675
[2025-12-03 03:10:21] 2025-12-03 11:09:45,467 | INFO     | sum of deviations: 1514187553193.4924
[2025-12-03 03:10:21] 2025-12-03 11:09:45,467 | INFO     | mean x: 1764726007.5518484
[2025-12-03 03:10:21] 2025-12-03 11:09:45,467 | INFO     | mean y: 3190471.904418395
[2025-12-03 03:10:21] 2025-12-03 11:09:45,467 | INFO     | intersect: -6314580634.500257
[2025-12-03 03:10:21] 2025-12-03 11:09:45,477 | INFO     | chi2: 7.304964505068821
[2025-12-03 03:10:21] 2025-12-03 11:09:45,485 | INFO     | current chi2=7.304964505068821 (change=29.864529578822136 %)
[2025-12-03 03:10:21] 2025-12-03 11:09:45,486 | INFO     | sum of square deviations: 417260407179.9046
[2025-12-03 03:10:21] 2025-12-03 11:09:45,585 | INFO     | sum of deviations: 1938374745659.003
[2025-12-03 03:10:21] 2025-12-03 11:09:45,585 | INFO     | mean x: 1764725855.0679348
[2025-12-03 03:10:21] 2025-12-03 11:09:45,585 | INFO     | mean y: 3201834.519927536
[2025-12-03 03:10:21] 2025-12-03 11:09:45,585 | INFO     | intersect: -8194796277.964099
[2025-12-03 03:10:21] 2025-12-03 11:09:45,586 | INFO     | chi2: 4.048231991650228
[2025-12-03 03:10:21] 2025-12-03 11:09:45,586 | INFO     | current chi2=4.048231991650228 (change=44.582455002468365 %)
[2025-12-03 03:10:21] 2025-12-03 11:09:45,587 | INFO     | sum of square deviations: 411617959173.62335
[2025-12-03 03:10:21] 2025-12-03 11:09:45,706 | INFO     | sum of deviations: 2149384473330.2385
[2025-12-03 03:10:21] 2025-12-03 11:09:45,706 | INFO     | mean x: 1764725702.5805278
[2025-12-03 03:10:21] 2025-12-03 11:09:45,706 | INFO     | mean y: 3207535.618744313
[2025-12-03 03:10:21] 2025-12-03 11:09:45,706 | INFO     | intersect: -9211827766.60294
[2025-12-03 03:10:21] 2025-12-03 11:09:45,707 | INFO     | chi2: 3.146426792243745
[2025-12-03 03:10:21] 2025-12-03 11:09:45,707 | INFO     | current chi2=3.146426792243745 (change=22.276519756439882 %)
[2025-12-03 03:10:21] 2025-12-03 11:09:45,707 | INFO     | right removable region: 1098
[2025-12-03 03:10:21] 2025-12-03 11:09:45,708 | INFO     | sum of square deviations: 422951600804.3722
[2025-12-03 03:10:21] 2025-12-03 11:09:45,827 | INFO     | sum of deviations: 755223116575.189
[2025-12-03 03:10:21] 2025-12-03 11:09:45,827 | INFO     | mean x: 1764726312.5509467
[2025-12-03 03:10:21] 2025-12-03 11:09:45,827 | INFO     | mean y: 3188865.297565374
[2025-12-03 03:10:21] 2025-12-03 11:09:45,827 | INFO     | intersect: -3147909518.3763847
[2025-12-03 03:10:21] 2025-12-03 11:09:45,828 | INFO     | chi2: 8.093962559523918
[2025-12-03 03:10:21] 2025-12-03 11:09:45,828 | INFO     | current chi2=8.093962559523918 (change=22.289304583244824 %)
[2025-12-03 03:10:21] 2025-12-03 11:09:45,828 | INFO     | left removable region: 10
[2025-12-03 03:10:21] 2025-12-03 11:09:45,829 | INFO     | sum of square deviations: 399380301587.20245
[2025-12-03 03:10:21] 2025-12-03 11:09:45,935 | INFO     | sum of deviations: 1741687612181.7117
[2025-12-03 03:10:21] 2025-12-03 11:09:45,935 | INFO     | mean x: 1764725977.108456
[2025-12-03 03:10:21] 2025-12-03 11:09:45,935 | INFO     | mean y: 3220399.5533088236
[2025-12-03 03:10:21] 2025-12-03 11:09:45,935 | INFO     | intersect: -7692705916.817507
[2025-12-03 03:10:21] 2025-12-03 11:09:45,936 | INFO     | chi2: 0.5928475960263997
[2025-12-03 03:10:21] 2025-12-03 11:09:45,936 | INFO     | current memory leak: 4.36 B/s (using 1088 data points, chi2=0.59)
[2025-12-03 03:10:21] 2025-12-03 11:09:45,937 | INFO     | could have reported an average CPU frequency of 3400 MHz (41 samples)
[2025-12-03 03:10:21] 2025-12-03 11:09:45,937 | INFO     | ..............................
[2025-12-03 03:10:21] 2025-12-03 11:09:45,937 | INFO     | . Timing measurements:
[2025-12-03 03:10:21] 2025-12-03 11:09:45,937 | INFO     | . get job = 0 s
[2025-12-03 03:10:21] 2025-12-03 11:09:45,937 | INFO     | . initial setup = 3 s
[2025-12-03 03:10:21] 2025-12-03 11:09:45,937 | INFO     | . payload setup = 6 s
[2025-12-03 03:10:21] 2025-12-03 11:09:45,937 | INFO     | . stage-in = 0 s
[2025-12-03 03:10:21] 2025-12-03 11:09:45,937 | INFO     | . payload execution = 67948 s
[2025-12-03 03:10:21] 2025-12-03 11:09:45,947 | INFO     | . stage-out = 7 s
[2025-12-03 03:10:21] 2025-12-03 11:09:45,947 | INFO     | . log creation = 2 s
[2025-12-03 03:10:21] 2025-12-03 11:09:45,947 | INFO     | ..............................
[2025-12-03 03:10:21] 2025-12-03 11:09:46,258 | INFO     | time since job start (68005s) is within the limit (172800.0s)
[2025-12-03 03:10:21] 2025-12-03 11:09:46,284 | INFO     | 
[2025-12-03 03:10:21] 2025-12-03 11:09:46,284 | INFO     | job summary report
[2025-12-03 03:10:21] 2025-12-03 11:09:46,284 | INFO     | --------------------------------------------------
[2025-12-03 03:10:21] 2025-12-03 11:09:46,284 | INFO     | PanDA job id: 6898762185
[2025-12-03 03:10:21] 2025-12-03 11:09:46,284 | INFO     | task id: 47556161
[2025-12-03 03:10:21] 2025-12-03 11:09:46,284 | INFO     | errors: (none)
[2025-12-03 03:10:21] 2025-12-03 11:09:46,285 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 03:10:21] 2025-12-03 11:09:46,285 | INFO     | pilot state: finished 
[2025-12-03 03:10:21] 2025-12-03 11:09:46,285 | INFO     | transexitcode: 0
[2025-12-03 03:10:21] 2025-12-03 11:09:46,285 | INFO     | exeerrorcode: 0
[2025-12-03 03:10:21] 2025-12-03 11:09:46,285 | INFO     | exeerrordiag: 
[2025-12-03 03:10:21] 2025-12-03 11:09:46,285 | INFO     | exitcode: 0
[2025-12-03 03:10:21] 2025-12-03 11:09:46,285 | INFO     | exitmsg: OK
[2025-12-03 03:10:21] 2025-12-03 11:09:46,285 | INFO     | cpuconsumptiontime: 205544 s
[2025-12-03 03:10:21] 2025-12-03 11:09:46,285 | INFO     | nevents: 1000
[2025-12-03 03:10:21] 2025-12-03 11:09:46,285 | INFO     | neventsw: 0
[2025-12-03 03:10:21] 2025-12-03 11:09:46,285 | INFO     | pid: 1549488
[2025-12-03 03:10:21] 2025-12-03 11:09:46,285 | INFO     | pgrp: 1549488
[2025-12-03 03:10:21] 2025-12-03 11:09:46,285 | INFO     | corecount: 10
[2025-12-03 03:10:21] 2025-12-03 11:09:46,285 | INFO     | event service: False
[2025-12-03 03:10:21] 2025-12-03 11:09:46,285 | INFO     | sizes: {0: 2284329, 5: 2284591, 11: 2284647, 67958: 2343125, 67967: 2352147, 67968: 2352203, 67989: 2352673}
[2025-12-03 03:10:21] 2025-12-03 11:09:46,285 | INFO     | --------------------------------------------------
[2025-12-03 03:10:21] 2025-12-03 11:09:46,285 | INFO     | 
[2025-12-03 03:10:21] 2025-12-03 11:09:46,286 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc234/slots/1
[2025-12-03 03:10:21] 2025-12-03 11:09:46,353 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 03:10:21] 2025-12-03 11:09:46,353 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 03:10:21] 2025-12-03 11:09:46,353 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 03:10:21] 2025-12-03 11:09:46,353 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 03:10:21] 2025-12-03 11:09:46,353 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 03:10:21] 2025-12-03 11:09:46,353 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 03:10:21] 2025-12-03 11:09:46,354 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 03:10:21] 2025-12-03 11:09:46,354 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 03:10:21] 2025-12-03 11:09:46,354 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 03:10:21] 2025-12-03 11:09:46,354 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 03:10:21] 2025-12-03 11:09:46,354 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 03:10:21] 2025-12-03 11:09:46,354 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 03:10:21] 2025-12-03 11:09:46,354 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 03:10:21] 2025-12-03 11:09:46,354 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 03:10:21] 2025-12-03 11:09:46,354 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 03:10:21] 2025-12-03 11:09:46,354 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 03:10:21] 2025-12-03 11:09:46,354 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 03:10:21] 2025-12-03 11:09:46,354 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 03:10:21] 2025-12-03 11:09:46,354 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 03:10:21] 2025-12-03 11:09:46,354 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 03:10:21] 2025-12-03 11:09:46,355 | INFO     | job 6898762185 has completed (purged errors)
[2025-12-03 03:10:21] 2025-12-03 11:09:46,355 | INFO     | overall cleanup function is called
[2025-12-03 03:10:21] 2025-12-03 11:09:47,392 | INFO     | --- collectZombieJob: --- 10, [1549488]
[2025-12-03 03:10:21] 2025-12-03 11:09:47,393 | INFO     | zombie collector waiting for pid 1549488
[2025-12-03 03:10:21] 2025-12-03 11:09:47,393 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 03:10:21] 2025-12-03 11:09:47,393 | INFO     | collected zombie processes
[2025-12-03 03:10:21] 2025-12-03 11:09:47,393 | INFO     | will attempt to kill all subprocesses of pid=1549488
[2025-12-03 03:10:21] 2025-12-03 11:09:48,048 | INFO     | process IDs to be killed: [1549488] (in reverse order)
[2025-12-03 03:10:21] 2025-12-03 11:09:48,319 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 03:10:21] 2025-12-03 11:09:48,320 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 03:10:21] 2025-12-03 11:09:48,333 | INFO     | did not find any defunct processes belonging to 1549488
[2025-12-03 03:10:21] 2025-12-03 11:09:48,349 | INFO     | did not find any defunct processes belonging to 1549488
[2025-12-03 03:10:21] 2025-12-03 11:09:48,355 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 03:10:21] 2025-12-03 11:09:48,355 | INFO     | ready for new job
[2025-12-03 03:10:21] 2025-12-03 11:09:48,355 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 03:10:21] 2025-12-03 11:09:48,359 | INFO     | ***************************************
[2025-12-03 03:10:21] 2025-12-03 11:09:48,359 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 03:10:21] 2025-12-03 11:09:48,359 | INFO     | ***************************************
[2025-12-03 03:10:21] 2025-12-03 11:09:48,359 | INFO     | 
[2025-12-03 03:10:21] 2025-12-03 11:09:48,361 | INFO     | architecture information:
[2025-12-03 03:10:21] 2025-12-03 11:09:48,367 | INFO     | executing command: cat /etc/os-release
[2025-12-03 03:10:21] 2025-12-03 11:09:48,406 | INFO     | cat /etc/os-release:
[2025-12-03 03:10:21] NAME="CentOS Linux"
[2025-12-03 03:10:21] VERSION="7 (Core)"
[2025-12-03 03:10:21] ID="centos"
[2025-12-03 03:10:21] ID_LIKE="rhel fedora"
[2025-12-03 03:10:21] VERSION_ID="7"
[2025-12-03 03:10:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 03:10:21] ANSI_COLOR="0;31"
[2025-12-03 03:10:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 03:10:21] HOME_URL="https://www.centos.org/"
[2025-12-03 03:10:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 03:10:21] 
[2025-12-03 03:10:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 03:10:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 03:10:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 03:10:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 03:10:21] 
[2025-12-03 03:10:21] 2025-12-03 11:09:48,407 | INFO     | ***************************************
[2025-12-03 03:10:21] 2025-12-03 11:09:48,909 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc234/slots/1
[2025-12-03 03:10:21] 2025-12-03 11:09:48,972 | INFO     | sufficient remaining disk space (45807042560 B)
[2025-12-03 03:10:21] 2025-12-03 11:09:48,972 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 03:10:21] 2025-12-03 11:09:48,972 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 03:10:21] 2025-12-03 11:09:48,972 | INFO     | update_server=False
[2025-12-03 03:10:21] 2025-12-03 11:09:48,972 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 03:10:21] 2025-12-03 11:09:48,972 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 03:10:21] 2025-12-03 11:09:48,972 | INFO     | aborting loop
[2025-12-03 03:10:21] 2025-12-03 11:09:49,486 | INFO     | all job control threads have been joined
[2025-12-03 03:10:21] 2025-12-03 11:09:49,738 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 03:10:21] 2025-12-03 11:09:49,801 | INFO     | all data control threads have been joined
[2025-12-03 03:10:21] 2025-12-03 11:09:49,977 | INFO     | [job] retrieve thread has finished
[2025-12-03 03:10:21] 2025-12-03 11:09:49,977 | INFO     | [job] job monitor thread has finished
[2025-12-03 03:10:21] 2025-12-03 11:09:50,217 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 03:10:21] 2025-12-03 11:09:50,239 | INFO     | all payload control threads have been joined
[2025-12-03 03:10:21] 2025-12-03 11:09:50,491 | INFO     | [job] control thread has finished
[2025-12-03 03:10:21] 2025-12-03 11:09:50,556 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 03:10:21] 2025-12-03 11:09:50,556 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 03:10:21] 2025-12-03 11:09:50,693 | INFO     | [payload] failed_post thread has finished
[2025-12-03 03:10:21] 2025-12-03 11:09:50,807 | INFO     | [data] control thread has finished
[2025-12-03 03:10:21] 2025-12-03 11:09:50,988 | INFO     | [payload] validate_post thread has finished
[2025-12-03 03:10:21] 2025-12-03 11:09:51,223 | INFO     | [data] copytool_in thread has finished
[2025-12-03 03:10:21] 2025-12-03 11:09:51,243 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 03:10:21] 2025-12-03 11:09:51,245 | INFO     | [payload] control thread has finished
[2025-12-03 03:10:21] 2025-12-03 11:09:51,327 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 03:10:21] 2025-12-03 11:09:51,410 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 03:10:21] 2025-12-03 11:09:51,410 | INFO     | [job] validate thread has finished
[2025-12-03 03:10:21] 2025-12-03 11:09:52,223 | INFO     | [data] copytool_out thread has finished
[2025-12-03 03:10:21] 2025-12-03 11:09:52,332 | INFO     | [job] queue monitor thread has finished
[2025-12-03 03:10:21] 2025-12-03 11:09:53,745 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 03:10:21] 2025-12-03 11:10:14,681 | INFO     | [monitor] cgroup control has ended
[2025-12-03 03:10:21] 2025-12-03 11:10:15,387 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132228581873472)>', '<ExcThread(monitor, started 132227790784256)>']
[2025-12-03 03:10:21] 2025-12-03 11:10:20,214 | INFO     | PID=1542813 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 03:10:21] 2025-12-03 11:10:20,214 | INFO     | .. there are 11 such processes running
[2025-12-03 03:10:21] 2025-12-03 11:10:20,217 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 03:10:21] 2025-12-03 11:10:20,217 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 03:10:21] 2025-12-03 11:10:20,217 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 03:10:21] 2025-12-03 11:10:20,217 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 03:10:21] 2025-12-03 11:10:20,217 | INFO     | [monitor] control thread has ended
[2025-12-03 03:10:21] 2025-12-03 11:10:20,412 | INFO     | all workflow threads have been joined
[2025-12-03 03:10:21] 2025-12-03 11:10:20,412 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 03:10:21] 2025-12-03 11:10:20,412 | INFO     | traces error code: 0
[2025-12-03 03:10:21] 2025-12-03 11:10:20,412 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 03:10:21] 2025-12-03 11:10:20,964 [wrapper] ==== pilot stdout END ====
[2025-12-03 03:10:21] 2025-12-03 11:10:20,976 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 03:10:21] 2025-12-03 11:10:20,985 [wrapper] pilotpid: 1542813
[2025-12-03 03:10:21] 2025-12-03 11:10:20,991 [wrapper] Pilot exit status: 0
[2025-12-03 03:10:21] 2025-12-03 11:10:21,044 [wrapper] pandaids: 6898762185
[2025-12-03 03:10:21] 2025-12-03 11:10:21,164 [wrapper] cleanup supervisor_pilot 2734174 1542814
[2025-12-03 03:10:21] 2025-12-03 11:10:21,175 [wrapper] Test setup, not cleaning
[2025-12-03 03:10:21] 2025-12-03 11:10:21,188 [wrapper] apfmon messages muted
[2025-12-03 03:10:21] 2025-12-03 11:10:21,202 [wrapper] ==== wrapper stdout END ====
[2025-12-03 03:10:21] 2025-12-03 11:10:21,208 [wrapper] ==== wrapper stderr END ====
[2025-12-03 03:10:21]  *** Error codes and diagnostics ***
[2025-12-03 03:10:21]     "exeErrorCode": 0,
[2025-12-03 03:10:21]     "exeErrorDiag": "",
[2025-12-03 03:10:21]     "pilotErrorCode": 0,
[2025-12-03 03:10:21]     "pilotErrorDiag": "",
[2025-12-03 03:10:21]  *** Listing of results directory ***
[2025-12-03 03:10:21] total 1328952
[2025-12-03 03:10:21] -rw-r--r-- 1 root root    576529 Nov 26 15:14 pilot3.tar.gz
[2025-12-03 03:10:21] -rwx------ 1 4871 1028     36292 Nov 26 15:36 runpilot2-wrapper.sh
[2025-12-03 03:10:21] -rw-r--r-- 1 root root      5112 Nov 26 15:36 queuedata.json
[2025-12-03 03:10:21] -rw-r--r-- 1 root root       100 Dec  2 08:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 03:10:21] -rwxr-xr-x 1 root root      7986 Dec  2 08:16 run_atlas
[2025-12-03 03:10:21] -rw-r--r-- 1 root root       105 Dec  2 08:16 job.xml
[2025-12-03 03:10:21] -rw-r--r-- 2 root root 408732938 Dec  2 08:16 EVNT.47483658._002738.pool.root.1
[2025-12-03 03:10:21] drwxrwx--x 2 root root      4096 Dec  2 08:16 shared
[2025-12-03 03:10:21] -rw-r--r-- 2 root root    590104 Dec  2 08:16 input.tar.gz
[2025-12-03 03:10:21] -rw-r--r-- 2 root root     15847 Dec  2 08:16 start_atlas.sh
[2025-12-03 03:10:21] -rw-r--r-- 1 root root         0 Dec  2 08:16 boinc_setup_complete
[2025-12-03 03:10:21] -rw-r--r-- 1 root root         0 Dec  2 08:16 boinc_lockfile
[2025-12-03 03:10:21] -rw-r--r-- 1 root root      2786 Dec  2 08:16 pandaJob.out
[2025-12-03 03:10:21] -rw------- 1 root root    989202 Dec  2 08:16 agis_schedconf.cvmfs.json
[2025-12-03 03:10:21] drwxr-xr-x 5  320  320      4096 Dec  2 08:16 pilot3
[2025-12-03 03:10:21] -rw-r--r-- 1 root root      9240 Dec  2 09:15 init_data.xml
[2025-12-03 03:10:21] -rw-r--r-- 1 root root       533 Dec  3 02:45 boinc_task_state.xml
[2025-12-03 03:10:21] -rw------- 1 root root 924600202 Dec  3 03:07 HITS.47556161._007202.pool.root.1
[2025-12-03 03:10:21] -rw------- 1 root root      1053 Dec  3 03:09 memory_monitor_summary.json
[2025-12-03 03:10:21] -rw------- 1 root root   1516240 Dec  3 03:09 agis_ddmendpoints.agis.ALL.json
[2025-12-03 03:10:21] -rw------- 1 root root   2481750 Dec  3 03:09 log.47556161._007202.job.log.tgz.1
[2025-12-03 03:10:21] -rw------- 1 root root      8600 Dec  3 03:09 heartbeat.json
[2025-12-03 03:10:21] -rw-r--r-- 1 root root        29 Dec  3 03:10 wrapper_checkpoint.txt
[2025-12-03 03:10:21] -rw-r--r-- 1 root root      8192 Dec  3 03:10 boinc_mmap_file
[2025-12-03 03:10:21] -rw------- 1 root root        95 Dec  3 03:10 pilot_heartbeat.json
[2025-12-03 03:10:21] -rw------- 1 root root      4838 Dec  3 03:10 pilotlog.txt
[2025-12-03 03:10:21] -rw------- 1 root root   9317862 Dec  3 03:10 log.47556161._007202.job.log.1
[2025-12-03 03:10:21] -rw------- 1 root root       353 Dec  3 03:10 output.list
[2025-12-03 03:10:21] -rw-r--r-- 1 root root       620 Dec  3 03:10 runtime_log
[2025-12-03 03:10:21] -rw------- 1 root root  11816960 Dec  3 03:10 result.tar.gz
[2025-12-03 03:10:21] -rw-r--r-- 1 root root      9021 Dec  3 03:10 runtime_log.err
[2025-12-03 03:10:21] -rw------- 1 root root       663 Dec  3 03:10 k8rNDmXEei8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSQNKDmy8KIvm.diag
[2025-12-03 03:10:21] -rw-r--r-- 1 root root     21433 Dec  3 03:10 stderr.txt
[2025-12-03 03:10:21] HITS file was successfully produced:
[2025-12-03 03:10:21] -rw------- 1 root root 924600202 Dec  3 03:07 shared/HITS.pool.root.1
[2025-12-03 03:10:21]  *** Contents of shared directory: ***
[2025-12-03 03:10:21] total 1314232
[2025-12-03 03:10:21] -rw-r--r-- 2 root root 408732938 Dec  2 08:16 ATLAS.root_0
[2025-12-03 03:10:21] -rw-r--r-- 2 root root    590104 Dec  2 08:16 input.tar.gz
[2025-12-03 03:10:21] -rw-r--r-- 2 root root     15847 Dec  2 08:16 start_atlas.sh
[2025-12-03 03:10:21] -rw------- 1 root root 924600202 Dec  3 03:07 HITS.pool.root.1
[2025-12-03 03:10:21] -rw------- 1 root root  11816960 Dec  3 03:10 result.tar.gz
03:10:23 (1538647): run_atlas exited; CPU time 205553.163226
03:10:23 (1538647): called boinc_finish(0)

</stderr_txt>
]]>

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