Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:56:52 (1344617): wrapper (7.7.26015): starting
13:56:52 (1344617): wrapper: running run_atlas (--nthreads 9)
[2025-12-01 13:56:52] Arguments: --nthreads 9
[2025-12-01 13:56:52] Threads: 9
[2025-12-01 13:56:52] Checking for CVMFS
[2025-12-01 13:56:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 13:56:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 13:56:52] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 13:56:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 13:56:52] 2.13.3.0 4548 1321 77280 153528 0 71 4809412 37030913 1860 16776704 0 1668985 99.561 733401 48802 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-01 13:56:52] CVMFS is ok
[2025-12-01 13:56:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 13:56:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 13:56:52] Further information can be found at the LHC@home message board.
[2025-12-01 13:56:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 13:56:52] Checking for apptainer binary...
[2025-12-01 13:56:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 13:56:52] Running /usr/bin/apptainer --version
[2025-12-01 13:56:52] apptainer version 1.4.4-1.el9
[2025-12-01 13:56:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 13:56:52] c-205-36.aglt2.org
[2025-12-01 13:56:52] apptainer works
[2025-12-01 13:56:52] Set ATHENA_PROC_NUMBER=9
[2025-12-01 13:56:52] Set ATHENA_CORE_NUMBER=9
[2025-12-01 13:56:52] Starting ATLAS job with PandaID=6894252680
[2025-12-01 13:56:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 23:03:00]  *** The last 200 lines of the pilot log: ***
[2025-12-01 23:03:00] 2025-12-02 04:01:56,058 | INFO     | monitor loop #2430: job 0:6894252680 is in state 'finished'
[2025-12-01 23:03:00] 2025-12-02 04:01:56,058 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-01 23:03:00] 2025-12-02 04:01:57,031 | INFO     | time since job start (32694s) is within the limit (172800.0s)
[2025-12-01 23:03:00] 2025-12-02 04:01:57,293 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-01 23:03:00] 2025-12-02 04:01:57,298 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2637.669874999999
[2025-12-01 23:03:00] 2025-12-02 04:01:57,305 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6894252680/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 23:03:00] 2025-12-02 04:01:57,306 | INFO     | extracted standard info from prmon json
[2025-12-01 23:03:00] 2025-12-02 04:01:57,306 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 23:03:00] 2025-12-02 04:01:57,306 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 23:03:00] 2025-12-02 04:01:57,317 | INFO     | fitting pss+swap vs Time
[2025-12-01 23:03:00] 2025-12-02 04:01:57,318 | INFO     | sum of square deviations: 47749756839.99806
[2025-12-01 23:03:00] 2025-12-02 04:01:57,325 | INFO     | sum of deviations: 694892537313.8881
[2025-12-01 23:03:00] 2025-12-02 04:01:57,325 | INFO     | mean x: 1764631764.5018656
[2025-12-01 23:03:00] 2025-12-02 04:01:57,326 | INFO     | mean y: 3118035.1119402987
[2025-12-01 23:03:00] 2025-12-02 04:01:57,326 | INFO     | intersect: -25677210523.801716
[2025-12-01 23:03:00] 2025-12-02 04:01:57,327 | INFO     | chi2: 5.051783181984895
[2025-12-01 23:03:00] 2025-12-02 04:01:57,327 | INFO     | sum of square deviations: 46425899764.998146
[2025-12-01 23:03:00] 2025-12-02 04:01:57,335 | INFO     | sum of deviations: 869690387722.7609
[2025-12-01 23:03:00] 2025-12-02 04:01:57,335 | INFO     | mean x: 1764631612.0018833
[2025-12-01 23:03:00] 2025-12-02 04:01:57,335 | INFO     | mean y: 3138147.2391713746
[2025-12-01 23:03:00] 2025-12-02 04:01:57,335 | INFO     | intersect: -33053478064.791714
[2025-12-01 23:03:00] 2025-12-02 04:01:57,336 | INFO     | chi2: 2.3283518389607334
[2025-12-01 23:03:00] 2025-12-02 04:01:57,336 | INFO     | current chi2=2.3283518389607334 (change=53.91029751110773 %)
[2025-12-01 23:03:00] 2025-12-02 04:01:57,337 | INFO     | sum of square deviations: 45126740827.4982
[2025-12-01 23:03:00] 2025-12-02 04:01:57,344 | INFO     | sum of deviations: 893805812471.8864
[2025-12-01 23:03:00] 2025-12-02 04:01:57,345 | INFO     | mean x: 1764631459.5019011
[2025-12-01 23:03:00] 2025-12-02 04:01:57,345 | INFO     | mean y: 3140956.114068441
[2025-12-01 23:03:00] 2025-12-02 04:01:57,345 | INFO     | intersect: -34948150150.91952
[2025-12-01 23:03:00] 2025-12-02 04:01:57,346 | INFO     | chi2: 2.094622548990323
[2025-12-01 23:03:00] 2025-12-02 04:01:57,346 | INFO     | current chi2=2.094622548990323 (change=10.038400814661069 %)
[2025-12-01 23:03:00] 2025-12-02 04:01:57,346 | INFO     | right removable region: 525
[2025-12-01 23:03:00] 2025-12-02 04:01:57,347 | INFO     | sum of square deviations: 46425899154.998146
[2025-12-01 23:03:00] 2025-12-02 04:01:57,355 | INFO     | sum of deviations: 544968519463.09247
[2025-12-01 23:03:00] 2025-12-02 04:01:57,355 | INFO     | mean x: 1764631917.0018833
[2025-12-01 23:03:00] 2025-12-02 04:01:57,355 | INFO     | mean y: 3135263.9077212806
[2025-12-01 23:03:00] 2025-12-02 04:01:57,355 | INFO     | intersect: -20710924360.33766
[2025-12-01 23:03:00] 2025-12-02 04:01:57,356 | INFO     | chi2: 3.0917135506715683
[2025-12-01 23:03:00] 2025-12-02 04:01:57,356 | INFO     | current chi2=3.0917135506715683 (change=38.79955969415133 %)
[2025-12-01 23:03:00] 2025-12-02 04:01:57,357 | INFO     | sum of square deviations: 45126739607.4982
[2025-12-01 23:03:00] 2025-12-02 04:01:57,364 | INFO     | sum of deviations: 508199201442.1444
[2025-12-01 23:03:00] 2025-12-02 04:01:57,364 | INFO     | mean x: 1764632069.5019011
[2025-12-01 23:03:00] 2025-12-02 04:01:57,365 | INFO     | mean y: 3139580.355513308
[2025-12-01 23:03:00] 2025-12-02 04:01:57,365 | INFO     | intersect: -19869437440.720837
[2025-12-01 23:03:00] 2025-12-02 04:01:57,366 | INFO     | chi2: 3.059622871692263
[2025-12-01 23:03:00] 2025-12-02 04:01:57,366 | INFO     | current chi2=3.059622871692263 (change=1.0379577038220376 %)
[2025-12-01 23:03:00] 2025-12-02 04:01:57,366 | INFO     | left removable region: 20
[2025-12-01 23:03:00] 2025-12-02 04:01:57,367 | INFO     | sum of square deviations: 39934726040.998184
[2025-12-01 23:03:00] 2025-12-02 04:01:57,373 | INFO     | sum of deviations: 642073639632.046
[2025-12-01 23:03:00] 2025-12-02 04:01:57,374 | INFO     | mean x: 1764632039.0019803
[2025-12-01 23:03:00] 2025-12-02 04:01:57,374 | INFO     | mean y: 3170833.9544554455
[2025-12-01 23:03:00] 2025-12-02 04:01:57,374 | INFO     | intersect: -28368720705.507313
[2025-12-01 23:03:00] 2025-12-02 04:01:57,375 | INFO     | chi2: 0.05616055489079341
[2025-12-01 23:03:00] 2025-12-02 04:01:57,375 | INFO     | current memory leak: 16.08 B/s (using 505 data points, chi2=0.06)
[2025-12-01 23:03:00] 2025-12-02 04:01:57,375 | INFO     | could have reported an average CPU frequency of 2615 MHz (22 samples)
[2025-12-01 23:03:00] 2025-12-02 04:01:57,376 | INFO     | ..............................
[2025-12-01 23:03:00] 2025-12-02 04:01:57,376 | INFO     | . Timing measurements:
[2025-12-01 23:03:00] 2025-12-02 04:01:57,376 | INFO     | . get job = 0 s
[2025-12-01 23:03:00] 2025-12-02 04:01:57,376 | INFO     | . initial setup = 2 s
[2025-12-01 23:03:00] 2025-12-02 04:01:57,376 | INFO     | . payload setup = 5 s
[2025-12-01 23:03:00] 2025-12-02 04:01:57,376 | INFO     | . stage-in = 0 s
[2025-12-01 23:03:00] 2025-12-02 04:01:57,376 | INFO     | . payload execution = 32657 s
[2025-12-01 23:03:00] 2025-12-02 04:01:57,376 | INFO     | . stage-out = 3 s
[2025-12-01 23:03:00] 2025-12-02 04:01:57,377 | INFO     | . log creation = 0 s
[2025-12-01 23:03:00] 2025-12-02 04:01:57,377 | INFO     | ..............................
[2025-12-01 23:03:00] 2025-12-02 04:01:57,482 | INFO     | 
[2025-12-01 23:03:00] 2025-12-02 04:01:57,483 | INFO     | job summary report
[2025-12-01 23:03:00] 2025-12-02 04:01:57,483 | INFO     | --------------------------------------------------
[2025-12-01 23:03:00] 2025-12-02 04:01:57,483 | INFO     | PanDA job id: 6894252680
[2025-12-01 23:03:00] 2025-12-02 04:01:57,483 | INFO     | task id: 47533967
[2025-12-01 23:03:00] 2025-12-02 04:01:57,483 | INFO     | errors: (none)
[2025-12-01 23:03:00] 2025-12-02 04:01:57,483 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 23:03:00] 2025-12-02 04:01:57,483 | INFO     | pilot state: finished 
[2025-12-01 23:03:00] 2025-12-02 04:01:57,484 | INFO     | transexitcode: 0
[2025-12-01 23:03:00] 2025-12-02 04:01:57,484 | INFO     | exeerrorcode: 0
[2025-12-01 23:03:00] 2025-12-02 04:01:57,484 | INFO     | exeerrordiag: 
[2025-12-01 23:03:00] 2025-12-02 04:01:57,484 | INFO     | exitcode: 0
[2025-12-01 23:03:00] 2025-12-02 04:01:57,484 | INFO     | exitmsg: OK
[2025-12-01 23:03:00] 2025-12-02 04:01:57,484 | INFO     | cpuconsumptiontime: 288720 s
[2025-12-01 23:03:00] 2025-12-02 04:01:57,484 | INFO     | nevents: 1000
[2025-12-01 23:03:00] 2025-12-02 04:01:57,484 | INFO     | neventsw: 0
[2025-12-01 23:03:00] 2025-12-02 04:01:57,484 | INFO     | pid: 1354700
[2025-12-01 23:03:00] 2025-12-02 04:01:57,485 | INFO     | pgrp: 1354700
[2025-12-01 23:03:00] 2025-12-02 04:01:57,485 | INFO     | corecount: 9
[2025-12-01 23:03:00] 2025-12-02 04:01:57,485 | INFO     | event service: False
[2025-12-01 23:03:00] 2025-12-02 04:01:57,485 | INFO     | sizes: {0: 2284142, 1: 2284341, 4: 2284603, 12: 2284631, 32665: 2324941, 32666: 2324940, 32669: 2334118, 32673: 2334174, 32679: 2334420}
[2025-12-01 23:03:00] 2025-12-02 04:01:57,485 | INFO     | --------------------------------------------------
[2025-12-01 23:03:00] 2025-12-02 04:01:57,485 | INFO     | 
[2025-12-01 23:03:00] 2025-12-02 04:01:57,485 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-01 23:03:00] 2025-12-02 04:01:57,501 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 23:03:00] 2025-12-02 04:01:57,501 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 23:03:00] 2025-12-02 04:01:57,502 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 23:03:00] 2025-12-02 04:01:57,502 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 23:03:00] 2025-12-02 04:01:57,502 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 23:03:00] 2025-12-02 04:01:57,502 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 23:03:00] 2025-12-02 04:01:57,502 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 23:03:00] 2025-12-02 04:01:57,502 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 23:03:00] 2025-12-02 04:01:57,502 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 23:03:00] 2025-12-02 04:01:57,502 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 23:03:00] 2025-12-02 04:01:57,503 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 23:03:00] 2025-12-02 04:01:57,503 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 23:03:00] 2025-12-02 04:01:57,503 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 23:03:00] 2025-12-02 04:01:57,503 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 23:03:00] 2025-12-02 04:01:57,503 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 23:03:00] 2025-12-02 04:01:57,503 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 23:03:00] 2025-12-02 04:01:57,503 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 23:03:00] 2025-12-02 04:01:57,504 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 23:03:00] 2025-12-02 04:01:57,504 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 23:03:00] 2025-12-02 04:01:57,504 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 23:03:00] 2025-12-02 04:01:57,504 | INFO     | job 6894252680 has completed (purged errors)
[2025-12-01 23:03:00] 2025-12-02 04:01:57,504 | INFO     | overall cleanup function is called
[2025-12-01 23:03:00] 2025-12-02 04:01:58,516 | INFO     | --- collectZombieJob: --- 10, [1354700]
[2025-12-01 23:03:00] 2025-12-02 04:01:58,517 | INFO     | zombie collector waiting for pid 1354700
[2025-12-01 23:03:00] 2025-12-02 04:01:58,517 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 23:03:00] 2025-12-02 04:01:58,517 | INFO     | collected zombie processes
[2025-12-01 23:03:00] 2025-12-02 04:01:58,517 | INFO     | will attempt to kill all subprocesses of pid=1354700
[2025-12-01 23:03:00] 2025-12-02 04:01:58,709 | INFO     | process IDs to be killed: [1354700] (in reverse order)
[2025-12-01 23:03:00] 2025-12-02 04:01:58,765 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 23:03:00] 2025-12-02 04:01:58,766 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 23:03:00] 2025-12-02 04:01:58,771 | INFO     | did not find any defunct processes belonging to 1354700
[2025-12-01 23:03:00] 2025-12-02 04:01:58,775 | INFO     | did not find any defunct processes belonging to 1354700
[2025-12-01 23:03:00] 2025-12-02 04:01:58,776 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 23:03:00] 2025-12-02 04:01:58,777 | INFO     | ready for new job
[2025-12-01 23:03:00] 2025-12-02 04:01:58,777 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 23:03:00] 2025-12-02 04:01:58,780 | INFO     | ***************************************
[2025-12-01 23:03:00] 2025-12-02 04:01:58,780 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 23:03:00] 2025-12-02 04:01:58,780 | INFO     | ***************************************
[2025-12-01 23:03:00] 2025-12-02 04:01:58,780 | INFO     | 
[2025-12-01 23:03:00] 2025-12-02 04:01:58,782 | INFO     | architecture information:
[2025-12-01 23:03:00] 2025-12-02 04:01:58,783 | INFO     | executing command: cat /etc/os-release
[2025-12-01 23:03:00] 2025-12-02 04:01:58,794 | INFO     | cat /etc/os-release:
[2025-12-01 23:03:00] NAME="CentOS Linux"
[2025-12-01 23:03:00] VERSION="7 (Core)"
[2025-12-01 23:03:00] ID="centos"
[2025-12-01 23:03:00] ID_LIKE="rhel fedora"
[2025-12-01 23:03:00] VERSION_ID="7"
[2025-12-01 23:03:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 23:03:00] ANSI_COLOR="0;31"
[2025-12-01 23:03:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 23:03:00] HOME_URL="https://www.centos.org/"
[2025-12-01 23:03:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 23:03:00] 
[2025-12-01 23:03:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 23:03:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 23:03:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 23:03:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 23:03:00] 
[2025-12-01 23:03:00] 2025-12-02 04:01:58,794 | INFO     | ***************************************
[2025-12-01 23:03:00] 2025-12-02 04:01:59,297 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-01 23:03:00] 2025-12-02 04:01:59,311 | INFO     | sufficient remaining disk space (38909509632 B)
[2025-12-01 23:03:00] 2025-12-02 04:01:59,312 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 23:03:00] 2025-12-02 04:01:59,312 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 23:03:00] 2025-12-02 04:01:59,312 | INFO     | update_server=False
[2025-12-01 23:03:00] 2025-12-02 04:01:59,312 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 23:03:00] 2025-12-02 04:01:59,312 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 23:03:00] 2025-12-02 04:01:59,566 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 23:03:00] 2025-12-02 04:01:59,566 | INFO     | aborting loop
[2025-12-01 23:03:00] 2025-12-02 04:01:59,941 | INFO     | all payload control threads have been joined
[2025-12-01 23:03:00] 2025-12-02 04:01:59,975 | INFO     | all data control threads have been joined
[2025-12-01 23:03:00] 2025-12-02 04:02:00,317 | INFO     | [job] retrieve thread has finished
[2025-12-01 23:03:00] 2025-12-02 04:02:00,318 | INFO     | [job] queue monitor thread has finished
[2025-12-01 23:03:00] 2025-12-02 04:02:00,414 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 23:03:00] 2025-12-02 04:02:00,463 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 23:03:00] 2025-12-02 04:02:00,572 | INFO     | [job] job monitor thread has finished
[2025-12-01 23:03:00] 2025-12-02 04:02:00,629 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 23:03:00] 2025-12-02 04:02:00,691 | INFO     | [payload] failed_post thread has finished
[2025-12-01 23:03:00] 2025-12-02 04:02:00,767 | INFO     | all job control threads have been joined
[2025-12-01 23:03:00] 2025-12-02 04:02:00,946 | INFO     | [payload] control thread has finished
[2025-12-01 23:03:00] 2025-12-02 04:02:00,980 | INFO     | [data] control thread has finished
[2025-12-01 23:03:00] 2025-12-02 04:02:01,014 | INFO     | [payload] validate_post thread has finished
[2025-12-01 23:03:00] 2025-12-02 04:02:01,252 | INFO     | [data] copytool_in thread has finished
[2025-12-01 23:03:00] 2025-12-02 04:02:01,252 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 23:03:00] 2025-12-02 04:02:01,400 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 23:03:00] 2025-12-02 04:02:01,483 | INFO     | [job] validate thread has finished
[2025-12-01 23:03:00] 2025-12-02 04:02:01,557 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 23:03:00] 2025-12-02 04:02:01,772 | INFO     | [job] control thread has finished
[2025-12-01 23:03:00] 2025-12-02 04:02:02,468 | INFO     | [data] copytool_out thread has finished
[2025-12-01 23:03:00] 2025-12-02 04:02:05,406 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 23:03:00] 2025-12-02 04:02:30,356 | INFO     | PID=1348319 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-01 23:03:00] 2025-12-02 04:02:30,356 | INFO     | .. there are 3 such processes running
[2025-12-01 23:03:00] 2025-12-02 04:02:30,356 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 23:03:00] 2025-12-02 04:02:30,357 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 23:03:00] 2025-12-02 04:02:30,357 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 23:03:00] 2025-12-02 04:02:54,501 | INFO     | [monitor] cgroup control has ended
[2025-12-01 23:03:00] 2025-12-02 04:02:55,084 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140084720961344)>', '<ExcThread(monitor, started 140084233885440)>']
[2025-12-01 23:03:00] 2025-12-02 04:02:55,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 23:03:00] 2025-12-02 04:02:55,481 | INFO     | [monitor] control thread has ended
[2025-12-01 23:03:00] 2025-12-02 04:03:00,085 | INFO     | all workflow threads have been joined
[2025-12-01 23:03:00] 2025-12-02 04:03:00,085 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 23:03:00] 2025-12-02 04:03:00,085 | INFO     | traces error code: 0
[2025-12-01 23:03:00] 2025-12-02 04:03:00,085 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 23:03:00] 2025-12-02 04:03:00,189 [wrapper] ==== pilot stdout END ====
[2025-12-01 23:03:00] 2025-12-02 04:03:00,191 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 23:03:00] 2025-12-02 04:03:00,194 [wrapper] pilotpid: 1348319
[2025-12-01 23:03:00] 2025-12-02 04:03:00,196 [wrapper] Pilot exit status: 0
[2025-12-01 23:03:00] 2025-12-02 04:03:00,204 [wrapper] pandaids: 6894252680
[2025-12-01 23:03:00] 2025-12-02 04:03:00,242 [wrapper] cleanup supervisor_pilot 1856869 1348320
[2025-12-01 23:03:00] 2025-12-02 04:03:00,244 [wrapper] Test setup, not cleaning
[2025-12-01 23:03:00] 2025-12-02 04:03:00,247 [wrapper] apfmon messages muted
[2025-12-01 23:03:00] 2025-12-02 04:03:00,249 [wrapper] ==== wrapper stdout END ====
[2025-12-01 23:03:00] 2025-12-02 04:03:00,251 [wrapper] ==== wrapper stderr END ====
[2025-12-01 23:03:00]  *** Error codes and diagnostics ***
[2025-12-01 23:03:00]     "exeErrorCode": 0,
[2025-12-01 23:03:00]     "exeErrorDiag": "",
[2025-12-01 23:03:00]     "pilotErrorCode": 0,
[2025-12-01 23:03:00]     "pilotErrorDiag": "",
[2025-12-01 23:03:00]  *** Listing of results directory ***
[2025-12-01 23:03:00] total 1330528
[2025-12-01 23:03:00] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 20:54 pilot3.tar.gz
[2025-12-01 23:03:00] -rwx------. 1 boincer umatlas     36292 Nov 20 21:00 runpilot2-wrapper.sh
[2025-12-01 23:03:00] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 21:00 queuedata.json
[2025-12-01 23:03:00] -rw-r--r--. 1 boincer umatlas       100 Dec  1 13:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 23:03:00] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  1 13:56 run_atlas
[2025-12-01 23:03:00] -rw-r--r--. 1 boincer umatlas       105 Dec  1 13:56 job.xml
[2025-12-01 23:03:00] -rw-r--r--. 2 boincer umatlas 411190248 Dec  1 13:56 EVNT.47493127._002112.pool.root.1
[2025-12-01 23:03:00] -rw-r--r--. 2 boincer umatlas     15847 Dec  1 13:56 start_atlas.sh
[2025-12-01 23:03:00] drwxrwx--x. 2 boincer umatlas      4096 Dec  1 13:56 shared
[2025-12-01 23:03:00] -rw-r--r--. 2 boincer umatlas    590107 Dec  1 13:56 input.tar.gz
[2025-12-01 23:03:00] -rw-r--r--. 1 boincer umatlas         0 Dec  1 13:56 boinc_lockfile
[2025-12-01 23:03:00] -rw-r--r--. 1 boincer umatlas      2785 Dec  1 13:56 pandaJob.out
[2025-12-01 23:03:00] -rw-------. 1 boincer umatlas    992004 Dec  1 13:57 agis_schedconf.cvmfs.json
[2025-12-01 23:03:00] drwx------. 5 boincer umatlas      4096 Dec  1 13:57 pilot3
[2025-12-01 23:03:00] -rw-r--r--. 1 boincer umatlas       533 Dec  1 22:53 boinc_task_state.xml
[2025-12-01 23:03:00] -rw-------. 1 boincer umatlas 934168655 Dec  1 23:01 HITS.47533967._000839.pool.root.1
[2025-12-01 23:03:00] -rw-------. 1 boincer umatlas      1063 Dec  1 23:01 memory_monitor_summary.json
[2025-12-01 23:03:00] -rw-------. 1 boincer umatlas        95 Dec  1 23:01 pilot_heartbeat.json
[2025-12-01 23:03:00] -rw-------. 1 boincer umatlas   1516240 Dec  1 23:01 agis_ddmendpoints.agis.ALL.json
[2025-12-01 23:03:00] -rw-------. 1 boincer umatlas   1924607 Dec  1 23:01 log.47533967._000839.job.log.tgz.1
[2025-12-01 23:03:00] -rw-------. 1 boincer umatlas      8624 Dec  1 23:01 heartbeat.json
[2025-12-01 23:03:00] -rw-r--r--. 1 boincer umatlas      6525 Dec  1 23:02 init_data.xml
[2025-12-01 23:03:00] -rw-r--r--. 1 boincer umatlas      8192 Dec  1 23:02 boinc_mmap_file
[2025-12-01 23:03:00] -rw-r--r--. 1 boincer umatlas        29 Dec  1 23:02 wrapper_checkpoint.txt
[2025-12-01 23:03:00] -rw-------. 1 boincer umatlas      4823 Dec  1 23:03 pilotlog.txt
[2025-12-01 23:03:00] -rw-------. 1 boincer umatlas   4666918 Dec  1 23:03 log.47533967._000839.job.log.1
[2025-12-01 23:03:00] -rw-------. 1 boincer umatlas       353 Dec  1 23:03 output.list
[2025-12-01 23:03:00] -rw-r--r--. 1 boincer umatlas       620 Dec  1 23:03 runtime_log
[2025-12-01 23:03:00] -rw-------. 1 boincer umatlas   6615040 Dec  1 23:03 result.tar.gz
[2025-12-01 23:03:00] -rw-------. 1 boincer umatlas       659 Dec  1 23:03 YW3MDmkcVg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzFHKDmC4Z9om.diag
[2025-12-01 23:03:00] -rw-r--r--. 1 boincer umatlas      8818 Dec  1 23:03 runtime_log.err
[2025-12-01 23:03:00] -rw-r--r--. 1 boincer umatlas     21347 Dec  1 23:03 stderr.txt
[2025-12-01 23:03:00] HITS file was successfully produced:
[2025-12-01 23:03:00] -rw-------. 1 boincer umatlas 934168655 Dec  1 23:01 shared/HITS.pool.root.1
[2025-12-01 23:03:00]  *** Contents of shared directory: ***
[2025-12-01 23:03:00] total 1320892
[2025-12-01 23:03:00] -rw-r--r--. 2 boincer umatlas 411190248 Dec  1 13:56 ATLAS.root_0
[2025-12-01 23:03:00] -rw-r--r--. 2 boincer umatlas     15847 Dec  1 13:56 start_atlas.sh
[2025-12-01 23:03:00] -rw-r--r--. 2 boincer umatlas    590107 Dec  1 13:56 input.tar.gz
[2025-12-01 23:03:00] -rw-------. 1 boincer umatlas 934168655 Dec  1 23:01 HITS.pool.root.1
[2025-12-01 23:03:00] -rw-------. 1 boincer umatlas   6615040 Dec  1 23:03 result.tar.gz
23:03:01 (1344617): run_atlas exited; CPU time 289047.365486
23:03:01 (1344617): called boinc_finish(0)

</stderr_txt>
]]>

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