Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
17:06:18 (2878715): wrapper (7.7.26015): starting
17:06:18 (2878715): wrapper: running run_atlas (--nthreads 10)
[2025-12-02 17:06:18] Arguments: --nthreads 10
[2025-12-02 17:06:18] Threads: 10
[2025-12-02 17:06:18] Checking for CVMFS
[2025-12-02 17:06:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 17:06:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 17:06:19] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 17:06:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 17:06:19] 2.13.3.0 4125 2006 60920 153575 0 109 2285485 4096000 11540 130560 0 306255566 99.999 297726 733 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-02 17:06:19] CVMFS is ok
[2025-12-02 17:06:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 17:06:19] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-02 17:06:19] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-02 17:06:19] Further information can be found at the LHC@home message board.
[2025-12-02 17:06:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 17:06:19] Checking for apptainer binary...
[2025-12-02 17:06:19] apptainer is not installed, using version from CVMFS
[2025-12-02 17:06:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 17:06:19] 7950x-linux
[2025-12-02 17:06:19] apptainer works
[2025-12-02 17:06:19] Set ATHENA_PROC_NUMBER=10
[2025-12-02 17:06:19] Set ATHENA_CORE_NUMBER=10
[2025-12-02 17:06:19] Starting ATLAS job with PandaID=6897016324
[2025-12-02 17:06:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc522/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 07:49:07]  *** The last 200 lines of the pilot log: ***
[2025-12-03 07:49:07] 2025-12-03 15:48:02,890 | INFO     | monitor loop #3831: job 0:6897016324 is in state 'finished'
[2025-12-03 07:49:07] 2025-12-03 15:48:02,890 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 07:49:07] 2025-12-03 15:48:03,051 | INFO     | time since job start (52891s) is within the limit (172800.0s)
[2025-12-03 07:49:07] 2025-12-03 15:48:04,364 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-03 07:49:07] 2025-12-03 15:48:04,367 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4000.1306562499994
[2025-12-03 07:49:07] 2025-12-03 15:48:04,370 | INFO     | using path: /var/lib/multiboinc/boinc522/slots/1/PanDA_Pilot-6897016324/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 07:49:07] 2025-12-03 15:48:04,371 | INFO     | extracted standard info from prmon json
[2025-12-03 07:49:07] 2025-12-03 15:48:04,371 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 07:49:07] 2025-12-03 15:48:04,371 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 07:49:07] 2025-12-03 15:48:04,378 | INFO     | fitting pss+swap vs Time
[2025-12-03 07:49:07] 2025-12-03 15:48:04,378 | INFO     | sum of square deviations: 202085493218.0
[2025-12-03 07:49:07] 2025-12-03 15:48:04,387 | INFO     | sum of deviations: 1841954286266.0002
[2025-12-03 07:49:07] 2025-12-03 15:48:04,387 | INFO     | mean x: 1764750436.0
[2025-12-03 07:49:07] 2025-12-03 15:48:04,387 | INFO     | mean y: 3710296.1787773934
[2025-12-03 07:49:07] 2025-12-03 15:48:04,387 | INFO     | intersect: -16081509765.972912
[2025-12-03 07:49:07] 2025-12-03 15:48:04,387 | INFO     | chi2: 4.879576796237927
[2025-12-03 07:49:07] 2025-12-03 15:48:04,388 | INFO     | sum of square deviations: 198609325715.5
[2025-12-03 07:49:07] 2025-12-03 15:48:04,396 | INFO     | sum of deviations: 2153727254003.9993
[2025-12-03 07:49:07] 2025-12-03 15:48:04,396 | INFO     | mean x: 1764750283.5
[2025-12-03 07:49:07] 2025-12-03 15:48:04,396 | INFO     | mean y: 3723959.1229698374
[2025-12-03 07:49:07] 2025-12-03 15:48:04,396 | INFO     | intersect: -19133296764.31333
[2025-12-03 07:49:07] 2025-12-03 15:48:04,397 | INFO     | chi2: 2.337905462990326
[2025-12-03 07:49:07] 2025-12-03 15:48:04,397 | INFO     | current chi2=2.337905462990326 (change=52.08794613514819 %)
[2025-12-03 07:49:07] 2025-12-03 15:48:04,397 | INFO     | sum of square deviations: 195173251988.0
[2025-12-03 07:49:07] 2025-12-03 15:48:04,408 | INFO     | sum of deviations: 2163077653765.9998
[2025-12-03 07:49:07] 2025-12-03 15:48:04,408 | INFO     | mean x: 1764750131.0
[2025-12-03 07:49:07] 2025-12-03 15:48:04,408 | INFO     | mean y: 3724368.2380396733
[2025-12-03 07:49:07] 2025-12-03 15:48:04,408 | INFO     | intersect: -19554752697.468803
[2025-12-03 07:49:07] 2025-12-03 15:48:04,409 | INFO     | chi2: 2.261962787208931
[2025-12-03 07:49:07] 2025-12-03 15:48:04,409 | INFO     | current chi2=2.261962787208931 (change=3.248321071300284 %)
[2025-12-03 07:49:07] 2025-12-03 15:48:04,409 | INFO     | right removable region: 856
[2025-12-03 07:49:07] 2025-12-03 15:48:04,409 | INFO     | sum of square deviations: 198609325715.5
[2025-12-03 07:49:07] 2025-12-03 15:48:04,421 | INFO     | sum of deviations: 1565713955534.0
[2025-12-03 07:49:07] 2025-12-03 15:48:04,421 | INFO     | mean x: 1764750588.5
[2025-12-03 07:49:07] 2025-12-03 15:48:04,421 | INFO     | mean y: 3722392.958236659
[2025-12-03 07:49:07] 2025-12-03 15:48:04,422 | INFO     | intersect: -13908487491.935654
[2025-12-03 07:49:07] 2025-12-03 15:48:04,422 | INFO     | chi2: 2.875790155517527
[2025-12-03 07:49:07] 2025-12-03 15:48:04,422 | INFO     | current chi2=2.875790155517527 (change=41.06476287585609 %)
[2025-12-03 07:49:07] 2025-12-03 15:48:04,423 | INFO     | sum of square deviations: 195173251988.0
[2025-12-03 07:49:07] 2025-12-03 15:48:04,431 | INFO     | sum of deviations: 1482677472087.0
[2025-12-03 07:49:07] 2025-12-03 15:48:04,431 | INFO     | mean x: 1764750741.0
[2025-12-03 07:49:07] 2025-12-03 15:48:04,431 | INFO     | mean y: 3726077.5064177364
[2025-12-03 07:49:07] 2025-12-03 15:48:04,431 | INFO     | intersect: -13402599537.698355
[2025-12-03 07:49:07] 2025-12-03 15:48:04,431 | INFO     | chi2: 2.8081361683701456
[2025-12-03 07:49:07] 2025-12-03 15:48:04,431 | INFO     | current chi2=2.8081361683701456 (change=2.352535598523411 %)
[2025-12-03 07:49:07] 2025-12-03 15:48:04,431 | INFO     | left removable region: 20
[2025-12-03 07:49:07] 2025-12-03 15:48:04,432 | INFO     | sum of square deviations: 181174317885.0
[2025-12-03 07:49:07] 2025-12-03 15:48:04,440 | INFO     | sum of deviations: 1679109098259.9998
[2025-12-03 07:49:07] 2025-12-03 15:48:04,440 | INFO     | mean x: 1764750710.5
[2025-12-03 07:49:07] 2025-12-03 15:48:04,440 | INFO     | mean y: 3745888.349282297
[2025-12-03 07:49:07] 2025-12-03 15:48:04,440 | INFO     | intersect: -16351822653.336847
[2025-12-03 07:49:07] 2025-12-03 15:48:04,440 | INFO     | chi2: 0.13362538669877028
[2025-12-03 07:49:07] 2025-12-03 15:48:04,440 | INFO     | current memory leak: 9.27 B/s (using 836 data points, chi2=0.13)
[2025-12-03 07:49:07] 2025-12-03 15:48:04,441 | INFO     | could have reported an average CPU frequency of 4000 MHz (33 samples)
[2025-12-03 07:49:07] 2025-12-03 15:48:04,441 | INFO     | ..............................
[2025-12-03 07:49:07] 2025-12-03 15:48:04,441 | INFO     | . Timing measurements:
[2025-12-03 07:49:07] 2025-12-03 15:48:04,441 | INFO     | . get job = 0 s
[2025-12-03 07:49:07] 2025-12-03 15:48:04,441 | INFO     | . initial setup = 3 s
[2025-12-03 07:49:07] 2025-12-03 15:48:04,441 | INFO     | . payload setup = 10 s
[2025-12-03 07:49:07] 2025-12-03 15:48:04,441 | INFO     | . stage-in = 0 s
[2025-12-03 07:49:07] 2025-12-03 15:48:04,441 | INFO     | . payload execution = 52853 s
[2025-12-03 07:49:07] 2025-12-03 15:48:04,441 | INFO     | . stage-out = 3 s
[2025-12-03 07:49:07] 2025-12-03 15:48:04,441 | INFO     | . log creation = 0 s
[2025-12-03 07:49:07] 2025-12-03 15:48:04,441 | INFO     | ..............................
[2025-12-03 07:49:07] 2025-12-03 15:48:04,492 | INFO     | 
[2025-12-03 07:49:07] 2025-12-03 15:48:04,492 | INFO     | job summary report
[2025-12-03 07:49:07] 2025-12-03 15:48:04,492 | INFO     | --------------------------------------------------
[2025-12-03 07:49:07] 2025-12-03 15:48:04,492 | INFO     | PanDA job id: 6897016324
[2025-12-03 07:49:07] 2025-12-03 15:48:04,492 | INFO     | task id: 47538121
[2025-12-03 07:49:07] 2025-12-03 15:48:04,492 | INFO     | errors: (none)
[2025-12-03 07:49:07] 2025-12-03 15:48:04,492 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 07:49:07] 2025-12-03 15:48:04,492 | INFO     | pilot state: finished 
[2025-12-03 07:49:07] 2025-12-03 15:48:04,492 | INFO     | transexitcode: 0
[2025-12-03 07:49:07] 2025-12-03 15:48:04,492 | INFO     | exeerrorcode: 0
[2025-12-03 07:49:07] 2025-12-03 15:48:04,492 | INFO     | exeerrordiag: 
[2025-12-03 07:49:07] 2025-12-03 15:48:04,492 | INFO     | exitcode: 0
[2025-12-03 07:49:07] 2025-12-03 15:48:04,492 | INFO     | exitmsg: OK
[2025-12-03 07:49:07] 2025-12-03 15:48:04,492 | INFO     | cpuconsumptiontime: 117229 s
[2025-12-03 07:49:07] 2025-12-03 15:48:04,492 | INFO     | nevents: 1000
[2025-12-03 07:49:07] 2025-12-03 15:48:04,492 | INFO     | neventsw: 0
[2025-12-03 07:49:07] 2025-12-03 15:48:04,492 | INFO     | pid: 2889912
[2025-12-03 07:49:07] 2025-12-03 15:48:04,492 | INFO     | pgrp: 2889912
[2025-12-03 07:49:07] 2025-12-03 15:48:04,493 | INFO     | corecount: 10
[2025-12-03 07:49:07] 2025-12-03 15:48:04,493 | INFO     | event service: False
[2025-12-03 07:49:07] 2025-12-03 15:48:04,493 | INFO     | sizes: {0: 2284238, 1: 2284493, 6: 2284755, 11: 2284783, 52867: 2352715, 52871: 2361921, 52876: 2362175}
[2025-12-03 07:49:07] 2025-12-03 15:48:04,493 | INFO     | --------------------------------------------------
[2025-12-03 07:49:07] 2025-12-03 15:48:04,493 | INFO     | 
[2025-12-03 07:49:07] 2025-12-03 15:48:04,493 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc522/slots/1
[2025-12-03 07:49:07] 2025-12-03 15:48:04,535 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 07:49:07] 2025-12-03 15:48:04,535 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 07:49:07] 2025-12-03 15:48:04,535 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 07:49:07] 2025-12-03 15:48:04,535 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 07:49:07] 2025-12-03 15:48:04,535 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 07:49:07] 2025-12-03 15:48:04,535 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 07:49:07] 2025-12-03 15:48:04,535 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 07:49:07] 2025-12-03 15:48:04,535 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 07:49:07] 2025-12-03 15:48:04,535 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 07:49:07] 2025-12-03 15:48:04,535 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 07:49:07] 2025-12-03 15:48:04,535 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 07:49:07] 2025-12-03 15:48:04,535 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 07:49:07] 2025-12-03 15:48:04,535 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 07:49:07] 2025-12-03 15:48:04,535 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 07:49:07] 2025-12-03 15:48:04,535 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 07:49:07] 2025-12-03 15:48:04,535 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 07:49:07] 2025-12-03 15:48:04,535 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 07:49:07] 2025-12-03 15:48:04,535 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 07:49:07] 2025-12-03 15:48:04,536 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 07:49:07] 2025-12-03 15:48:04,536 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 07:49:07] 2025-12-03 15:48:04,536 | INFO     | job 6897016324 has completed (purged errors)
[2025-12-03 07:49:07] 2025-12-03 15:48:04,536 | INFO     | overall cleanup function is called
[2025-12-03 07:49:07] 2025-12-03 15:48:05,552 | INFO     | --- collectZombieJob: --- 10, [2889912]
[2025-12-03 07:49:07] 2025-12-03 15:48:05,552 | INFO     | zombie collector waiting for pid 2889912
[2025-12-03 07:49:07] 2025-12-03 15:48:05,552 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 07:49:07] 2025-12-03 15:48:05,552 | INFO     | collected zombie processes
[2025-12-03 07:49:07] 2025-12-03 15:48:05,552 | INFO     | will attempt to kill all subprocesses of pid=2889912
[2025-12-03 07:49:07] 2025-12-03 15:48:05,835 | INFO     | process IDs to be killed: [2889912] (in reverse order)
[2025-12-03 07:49:07] 2025-12-03 15:48:06,003 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 07:49:07] 2025-12-03 15:48:06,003 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 07:49:07] 2025-12-03 15:48:06,010 | INFO     | did not find any defunct processes belonging to 2889912
[2025-12-03 07:49:07] 2025-12-03 15:48:06,014 | INFO     | did not find any defunct processes belonging to 2889912
[2025-12-03 07:49:07] 2025-12-03 15:48:06,015 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 07:49:07] 2025-12-03 15:48:06,015 | INFO     | ready for new job
[2025-12-03 07:49:07] 2025-12-03 15:48:06,015 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 07:49:07] 2025-12-03 15:48:06,019 | INFO     | ***************************************
[2025-12-03 07:49:07] 2025-12-03 15:48:06,019 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 07:49:07] 2025-12-03 15:48:06,019 | INFO     | ***************************************
[2025-12-03 07:49:07] 2025-12-03 15:48:06,019 | INFO     | 
[2025-12-03 07:49:07] 2025-12-03 15:48:06,021 | INFO     | architecture information:
[2025-12-03 07:49:07] 2025-12-03 15:48:06,021 | INFO     | executing command: cat /etc/os-release
[2025-12-03 07:49:07] 2025-12-03 15:48:06,036 | INFO     | cat /etc/os-release:
[2025-12-03 07:49:07] NAME="CentOS Linux"
[2025-12-03 07:49:07] VERSION="7 (Core)"
[2025-12-03 07:49:07] ID="centos"
[2025-12-03 07:49:07] ID_LIKE="rhel fedora"
[2025-12-03 07:49:07] VERSION_ID="7"
[2025-12-03 07:49:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 07:49:07] ANSI_COLOR="0;31"
[2025-12-03 07:49:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 07:49:07] HOME_URL="https://www.centos.org/"
[2025-12-03 07:49:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 07:49:07] 
[2025-12-03 07:49:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 07:49:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 07:49:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 07:49:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 07:49:07] 
[2025-12-03 07:49:07] 2025-12-03 15:48:06,036 | INFO     | ***************************************
[2025-12-03 07:49:07] 2025-12-03 15:48:06,538 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc522/slots/1
[2025-12-03 07:49:07] 2025-12-03 15:48:06,571 | INFO     | sufficient remaining disk space (152664276992 B)
[2025-12-03 07:49:07] 2025-12-03 15:48:06,571 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 07:49:07] 2025-12-03 15:48:06,572 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 07:49:07] 2025-12-03 15:48:06,572 | INFO     | update_server=False
[2025-12-03 07:49:07] 2025-12-03 15:48:06,572 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 07:49:07] 2025-12-03 15:48:06,572 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 07:49:07] 2025-12-03 15:48:06,572 | INFO     | aborting loop
[2025-12-03 07:49:07] 2025-12-03 15:48:06,810 | INFO     | all job control threads have been joined
[2025-12-03 07:49:07] 2025-12-03 15:48:06,852 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 07:49:07] 2025-12-03 15:48:07,245 | INFO     | all payload control threads have been joined
[2025-12-03 07:49:07] 2025-12-03 15:48:07,247 | INFO     | all data control threads have been joined
[2025-12-03 07:49:07] 2025-12-03 15:48:07,577 | INFO     | [job] retrieve thread has finished
[2025-12-03 07:49:07] 2025-12-03 15:48:07,577 | INFO     | [job] job monitor thread has finished
[2025-12-03 07:49:07] 2025-12-03 15:48:07,814 | INFO     | [job] validate thread has finished
[2025-12-03 07:49:07] 2025-12-03 15:48:07,815 | INFO     | [job] control thread has finished
[2025-12-03 07:49:07] 2025-12-03 15:48:07,917 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 07:49:07] 2025-12-03 15:48:07,980 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 07:49:07] 2025-12-03 15:48:08,115 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 07:49:07] 2025-12-03 15:48:08,250 | INFO     | [payload] control thread has finished
[2025-12-03 07:49:07] 2025-12-03 15:48:08,252 | INFO     | [data] control thread has finished
[2025-12-03 07:49:07] 2025-12-03 15:48:08,310 | INFO     | [payload] failed_post thread has finished
[2025-12-03 07:49:07] 2025-12-03 15:48:08,520 | INFO     | [data] copytool_in thread has finished
[2025-12-03 07:49:07] 2025-12-03 15:48:08,857 | INFO     | [data] copytool_out thread has finished
[2025-12-03 07:49:07] 2025-12-03 15:48:08,975 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 07:49:07] 2025-12-03 15:48:08,998 | INFO     | [payload] validate_post thread has finished
[2025-12-03 07:49:07] 2025-12-03 15:48:09,431 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 07:49:07] 2025-12-03 15:48:09,502 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 07:49:07] 2025-12-03 15:48:10,507 | INFO     | [job] queue monitor thread has finished
[2025-12-03 07:49:07] 2025-12-03 15:48:13,436 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 07:49:07] 2025-12-03 15:48:36,448 | INFO     | PID=2882550 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 07:49:07] 2025-12-03 15:48:36,449 | INFO     | .. there are 14 such processes running
[2025-12-03 07:49:07] 2025-12-03 15:48:36,449 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 07:49:07] 2025-12-03 15:48:36,449 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 07:49:07] 2025-12-03 15:48:36,449 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 07:49:07] 2025-12-03 15:49:00,274 | INFO     | [monitor] cgroup control has ended
[2025-12-03 07:49:07] 2025-12-03 15:49:01,993 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139269664245568)>', '<ExcThread(monitor, started 139268877973248)>']
[2025-12-03 07:49:07] 2025-12-03 15:49:02,582 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 07:49:07] 2025-12-03 15:49:02,582 | INFO     | [monitor] control thread has ended
[2025-12-03 07:49:07] 2025-12-03 15:49:07,018 | INFO     | all workflow threads have been joined
[2025-12-03 07:49:07] 2025-12-03 15:49:07,018 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 07:49:07] 2025-12-03 15:49:07,018 | INFO     | traces error code: 0
[2025-12-03 07:49:07] 2025-12-03 15:49:07,018 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 07:49:07] 2025-12-03 15:49:07,108 [wrapper] ==== pilot stdout END ====
[2025-12-03 07:49:07] 2025-12-03 15:49:07,110 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 07:49:07] 2025-12-03 15:49:07,112 [wrapper] pilotpid: 2882550
[2025-12-03 07:49:07] 2025-12-03 15:49:07,113 [wrapper] Pilot exit status: 0
[2025-12-03 07:49:07] 2025-12-03 15:49:07,120 [wrapper] pandaids: 6897016324
[2025-12-03 07:49:07] 2025-12-03 15:49:07,165 [wrapper] cleanup supervisor_pilot 4068583 2882551
[2025-12-03 07:49:07] 2025-12-03 15:49:07,167 [wrapper] Test setup, not cleaning
[2025-12-03 07:49:07] 2025-12-03 15:49:07,169 [wrapper] apfmon messages muted
[2025-12-03 07:49:07] 2025-12-03 15:49:07,170 [wrapper] ==== wrapper stdout END ====
[2025-12-03 07:49:07] 2025-12-03 15:49:07,173 [wrapper] ==== wrapper stderr END ====
[2025-12-03 07:49:07]  *** Error codes and diagnostics ***
[2025-12-03 07:49:07]     "exeErrorCode": 0,
[2025-12-03 07:49:07]     "exeErrorDiag": "",
[2025-12-03 07:49:07]     "pilotErrorCode": 0,
[2025-12-03 07:49:07]     "pilotErrorDiag": "",
[2025-12-03 07:49:07]  *** Listing of results directory ***
[2025-12-03 07:49:07] total 1078344
[2025-12-03 07:49:07] -rw-r--r-- 1 root root    576529 Nov 28 02:28 pilot3.tar.gz
[2025-12-03 07:49:07] -rwx------ 1 4871 1028     36292 Nov 28 02:28 runpilot2-wrapper.sh
[2025-12-03 07:49:07] -rw-r--r-- 1 root root      5112 Nov 28 02:32 queuedata.json
[2025-12-03 07:49:07] -rw-r--r-- 1 root root       100 Dec  2 17:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 07:49:07] -rwxr-xr-x 1 root root      7986 Dec  2 17:06 run_atlas
[2025-12-03 07:49:07] -rw-r--r-- 1 root root       105 Dec  2 17:06 job.xml
[2025-12-03 07:49:07] -rw-r--r-- 1 root root      7073 Dec  2 17:06 init_data.xml
[2025-12-03 07:49:07] -rw-r--r-- 2 root root 379972783 Dec  2 17:06 EVNT.47528880._000016.pool.root.1
[2025-12-03 07:49:07] drwxrwx--x 2 root root      4096 Dec  2 17:06 shared
[2025-12-03 07:49:07] -rw-r--r-- 2 root root    590121 Dec  2 17:06 input.tar.gz
[2025-12-03 07:49:07] -rw-r--r-- 2 root root     15847 Dec  2 17:06 start_atlas.sh
[2025-12-03 07:49:07] -rw-r--r-- 1 root root         0 Dec  2 17:06 boinc_lockfile
[2025-12-03 07:49:07] -rw-r--r-- 1 root root      2880 Dec  2 17:06 pandaJob.out
[2025-12-03 07:49:07] -rw------- 1 root root    989284 Dec  2 17:06 agis_schedconf.cvmfs.json
[2025-12-03 07:49:07] drwxr-xr-x 5  320  320      4096 Dec  2 17:06 pilot3
[2025-12-03 07:49:07] -rw-r--r-- 1 root root       533 Dec  3 07:40 boinc_task_state.xml
[2025-12-03 07:49:07] -rw------- 1 root root 700569282 Dec  3 07:47 HITS.47538121._000152.pool.root.1
[2025-12-03 07:49:07] -rw------- 1 root root      1055 Dec  3 07:47 memory_monitor_summary.json
[2025-12-03 07:49:07] -rw------- 1 root root   1516240 Dec  3 07:47 agis_ddmendpoints.agis.ALL.json
[2025-12-03 07:49:07] -rw------- 1 root root   2343059 Dec  3 07:47 log.47538121._000152.job.log.tgz.1
[2025-12-03 07:49:07] -rw------- 1 root root     27739 Dec  3 07:48 heartbeat.json
[2025-12-03 07:49:07] -rw------- 1 root root        95 Dec  3 07:48 pilot_heartbeat.json
[2025-12-03 07:49:07] -rw-r--r-- 1 root root        29 Dec  3 07:49 wrapper_checkpoint.txt
[2025-12-03 07:49:07] -rw-r--r-- 1 root root      8192 Dec  3 07:49 boinc_mmap_file
[2025-12-03 07:49:07] -rw------- 1 root root      4839 Dec  3 07:49 pilotlog.txt
[2025-12-03 07:49:07] -rw------- 1 root root   7521059 Dec  3 07:49 log.47538121._000152.job.log.1
[2025-12-03 07:49:07] -rw------- 1 root root       353 Dec  3 07:49 output.list
[2025-12-03 07:49:07] -rw-r--r-- 1 root root       620 Dec  3 07:49 runtime_log
[2025-12-03 07:49:07] -rw------- 1 root root   9902080 Dec  3 07:49 result.tar.gz
[2025-12-03 07:49:07] -rw-r--r-- 1 root root      9021 Dec  3 07:49 runtime_log.err
[2025-12-03 07:49:07] -rw------- 1 root root       662 Dec  3 07:49 4j0MDmttAj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZWOKDmzIyxNn.diag
[2025-12-03 07:49:07] -rw-r--r-- 1 root root     21406 Dec  3 07:49 stderr.txt
[2025-12-03 07:49:07] HITS file was successfully produced:
[2025-12-03 07:49:07] -rw------- 1 root root 700569282 Dec  3 07:47 shared/HITS.pool.root.1
[2025-12-03 07:49:07]  *** Contents of shared directory: ***
[2025-12-03 07:49:07] total 1065496
[2025-12-03 07:49:07] -rw-r--r-- 2 root root 379972783 Dec  2 17:06 ATLAS.root_0
[2025-12-03 07:49:07] -rw-r--r-- 2 root root    590121 Dec  2 17:06 input.tar.gz
[2025-12-03 07:49:07] -rw-r--r-- 2 root root     15847 Dec  2 17:06 start_atlas.sh
[2025-12-03 07:49:07] -rw------- 1 root root 700569282 Dec  3 07:47 HITS.pool.root.1
[2025-12-03 07:49:07] -rw------- 1 root root   9902080 Dec  3 07:49 result.tar.gz
07:49:09 (2878715): run_atlas exited; CPU time 117522.425593
07:49:09 (2878715): called boinc_finish(0)

</stderr_txt>
]]>

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