Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:51:07 (167074): wrapper (7.7.26015): starting
21:51:07 (167074): wrapper: running run_atlas (--nthreads 4)
[2025-12-03 21:51:07] Arguments: --nthreads 4
[2025-12-03 21:51:07] Threads: 4
[2025-12-03 21:51:07] Checking for CVMFS
[2025-12-03 21:51:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 21:51:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 21:51:07] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 21:51:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 21:51:08] 2.9.2.0 3041 1109 70728 153612 3 68 31559491 36864001 0 130560 0 462118 99.983 42278 23791 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-03 21:51:08] CVMFS is ok
[2025-12-03 21:51:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 21:51:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-03 21:51:08] Further information can be found at the LHC@home message board.
[2025-12-03 21:51:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 21:51:08] Checking for apptainer binary...
[2025-12-03 21:51:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-03 21:51:08] Running /usr/bin/apptainer --version
[2025-12-03 21:51:08] apptainer version 1.4.1-1.1
[2025-12-03 21:51:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 21:51:08] cosA131b
[2025-12-03 21:51:08] apptainer works
[2025-12-03 21:51:08] Set ATHENA_PROC_NUMBER=4
[2025-12-03 21:51:08] Set ATHENA_CORE_NUMBER=4
[2025-12-03 21:51:08] Starting ATLAS job with PandaID=6896598327
[2025-12-03 21:51:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-04 03:45:49]  *** The last 200 lines of the pilot log: ***
[2025-12-04 03:45:49] 2025-12-04 02:44:46,914 | INFO     | monitor loop #1616: job 0:6896598327 is in state 'finished'
[2025-12-04 03:45:49] 2025-12-04 02:44:46,914 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-04 03:45:49] 2025-12-04 02:44:47,587 | INFO     | time since job start (21211s) is within the limit (172800.0s)
[2025-12-04 03:45:49] 2025-12-04 02:44:48,030 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-04 03:45:49] 2025-12-04 02:44:48,032 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3287.829625
[2025-12-04 03:45:49] 2025-12-04 02:44:48,033 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6896598327/memory_monitor_summary.json (trf name=prmon)
[2025-12-04 03:45:49] 2025-12-04 02:44:48,033 | INFO     | extracted standard info from prmon json
[2025-12-04 03:45:49] 2025-12-04 02:44:48,033 | INFO     | extracted standard memory fields from prmon json
[2025-12-04 03:45:49] 2025-12-04 02:44:48,034 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-04 03:45:49] 2025-12-04 02:44:48,036 | INFO     | fitting pss+swap vs Time
[2025-12-04 03:45:49] 2025-12-04 02:44:48,036 | INFO     | sum of square deviations: 13068103627.0
[2025-12-04 03:45:49] 2025-12-04 02:44:48,037 | INFO     | sum of deviations: 182692811502.99997
[2025-12-04 03:45:49] 2025-12-04 02:44:48,037 | INFO     | mean x: 1764805684.5
[2025-12-04 03:45:49] 2025-12-04 02:44:48,037 | INFO     | mean y: 2767267.103448276
[2025-12-04 03:45:49] 2025-12-04 02:44:48,037 | INFO     | intersect: -24669313813.707325
[2025-12-04 03:45:49] 2025-12-04 02:44:48,038 | INFO     | chi2: 5.612202894748763
[2025-12-04 03:45:49] 2025-12-04 02:44:48,038 | INFO     | sum of square deviations: 12512874612.0
[2025-12-04 03:45:49] 2025-12-04 02:44:48,039 | INFO     | sum of deviations: 267777611449.0
[2025-12-04 03:45:49] 2025-12-04 02:44:48,039 | INFO     | mean x: 1764805532.0
[2025-12-04 03:45:49] 2025-12-04 02:44:48,039 | INFO     | mean y: 2790536.2390670553
[2025-12-04 03:45:49] 2025-12-04 02:44:48,039 | INFO     | intersect: -37764343290.68637
[2025-12-04 03:45:49] 2025-12-04 02:44:48,039 | INFO     | chi2: 3.2504659244118526
[2025-12-04 03:45:49] 2025-12-04 02:44:48,039 | INFO     | current chi2=3.2504659244118526 (change=42.082173695942906 %)
[2025-12-04 03:45:49] 2025-12-04 02:44:48,039 | INFO     | sum of square deviations: 11973599384.5
[2025-12-04 03:45:49] 2025-12-04 02:44:48,041 | INFO     | sum of deviations: 261720079161.00012
[2025-12-04 03:45:49] 2025-12-04 02:44:48,041 | INFO     | mean x: 1764805379.5
[2025-12-04 03:45:49] 2025-12-04 02:44:48,041 | INFO     | mean y: 2788822.9881656803
[2025-12-04 03:45:49] 2025-12-04 02:44:48,041 | INFO     | intersect: -38572495750.53914
[2025-12-04 03:45:49] 2025-12-04 02:44:48,041 | INFO     | chi2: 3.2489926123674757
[2025-12-04 03:45:49] 2025-12-04 02:44:48,041 | INFO     | current chi2=3.2489926123674757 (change=0.04532618026578527 %)
[2025-12-04 03:45:49] 2025-12-04 02:44:48,041 | INFO     | right removable region: 337
[2025-12-04 03:45:49] 2025-12-04 02:44:48,041 | INFO     | sum of square deviations: 12512874612.0
[2025-12-04 03:45:49] 2025-12-04 02:44:48,042 | INFO     | sum of deviations: 76946934333.0
[2025-12-04 03:45:49] 2025-12-04 02:44:48,042 | INFO     | mean x: 1764805837.0
[2025-12-04 03:45:49] 2025-12-04 02:44:48,042 | INFO     | mean y: 2796271.0991253643
[2025-12-04 03:45:49] 2025-12-04 02:44:48,042 | INFO     | intersect: -10849737863.615507
[2025-12-04 03:45:49] 2025-12-04 02:44:48,042 | INFO     | chi2: 2.9436522039053674
[2025-12-04 03:45:49] 2025-12-04 02:44:48,042 | INFO     | current chi2=2.9436522039053674 (change=47.549077267685924 %)
[2025-12-04 03:45:49] 2025-12-04 02:44:48,043 | INFO     | sum of square deviations: 11973599384.5
[2025-12-04 03:45:49] 2025-12-04 02:44:48,044 | INFO     | sum of deviations: 39563959988.00001
[2025-12-04 03:45:49] 2025-12-04 02:44:48,044 | INFO     | mean x: 1764805989.5
[2025-12-04 03:45:49] 2025-12-04 02:44:48,044 | INFO     | mean y: 2806778.408284024
[2025-12-04 03:45:49] 2025-12-04 02:44:48,044 | INFO     | intersect: -5828582039.021777
[2025-12-04 03:45:49] 2025-12-04 02:44:48,044 | INFO     | chi2: 2.4600578100421187
[2025-12-04 03:45:49] 2025-12-04 02:44:48,044 | INFO     | current chi2=2.4600578100421187 (change=16.428380812843997 %)
[2025-12-04 03:45:49] 2025-12-04 02:44:48,044 | INFO     | left removable region: 20
[2025-12-04 03:45:49] 2025-12-04 02:44:48,044 | INFO     | sum of square deviations: 9877610318.0
[2025-12-04 03:45:49] 2025-12-04 02:44:48,045 | INFO     | sum of deviations: 102279123156.99994
[2025-12-04 03:45:49] 2025-12-04 02:44:48,045 | INFO     | mean x: 1764805959.0
[2025-12-04 03:45:49] 2025-12-04 02:44:48,045 | INFO     | mean y: 2835446.6687697163
[2025-12-04 03:45:49] 2025-12-04 02:44:48,045 | INFO     | intersect: -18271099261.996296
[2025-12-04 03:45:49] 2025-12-04 02:44:48,045 | INFO     | chi2: 0.036768557365256464
[2025-12-04 03:45:49] 2025-12-04 02:44:48,046 | INFO     | current memory leak: 10.35 B/s (using 317 data points, chi2=0.04)
[2025-12-04 03:45:49] 2025-12-04 02:44:48,046 | INFO     | could have reported an average CPU frequency of 3751 MHz (15 samples)
[2025-12-04 03:45:49] 2025-12-04 02:44:48,046 | INFO     | ..............................
[2025-12-04 03:45:49] 2025-12-04 02:44:48,046 | INFO     | . Timing measurements:
[2025-12-04 03:45:49] 2025-12-04 02:44:48,046 | INFO     | . get job = 0 s
[2025-12-04 03:45:49] 2025-12-04 02:44:48,046 | INFO     | . initial setup = 1 s
[2025-12-04 03:45:49] 2025-12-04 02:44:48,046 | INFO     | . payload setup = 6 s
[2025-12-04 03:45:49] 2025-12-04 02:44:48,046 | INFO     | . stage-in = 0 s
[2025-12-04 03:45:49] 2025-12-04 02:44:48,046 | INFO     | . payload execution = 21180 s
[2025-12-04 03:45:49] 2025-12-04 02:44:48,046 | INFO     | . stage-out = 1 s
[2025-12-04 03:45:49] 2025-12-04 02:44:48,046 | INFO     | . log creation = 0 s
[2025-12-04 03:45:49] 2025-12-04 02:44:48,046 | INFO     | ..............................
[2025-12-04 03:45:49] 2025-12-04 02:44:48,476 | INFO     | 
[2025-12-04 03:45:49] 2025-12-04 02:44:48,476 | INFO     | job summary report
[2025-12-04 03:45:49] 2025-12-04 02:44:48,476 | INFO     | --------------------------------------------------
[2025-12-04 03:45:49] 2025-12-04 02:44:48,476 | INFO     | PanDA job id: 6896598327
[2025-12-04 03:45:49] 2025-12-04 02:44:48,476 | INFO     | task id: 47538121
[2025-12-04 03:45:49] 2025-12-04 02:44:48,476 | INFO     | errors: (none)
[2025-12-04 03:45:49] 2025-12-04 02:44:48,476 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-04 03:45:49] 2025-12-04 02:44:48,476 | INFO     | pilot state: finished 
[2025-12-04 03:45:49] 2025-12-04 02:44:48,476 | INFO     | transexitcode: 0
[2025-12-04 03:45:49] 2025-12-04 02:44:48,476 | INFO     | exeerrorcode: 0
[2025-12-04 03:45:49] 2025-12-04 02:44:48,476 | INFO     | exeerrordiag: 
[2025-12-04 03:45:49] 2025-12-04 02:44:48,476 | INFO     | exitcode: 0
[2025-12-04 03:45:49] 2025-12-04 02:44:48,477 | INFO     | exitmsg: OK
[2025-12-04 03:45:49] 2025-12-04 02:44:48,477 | INFO     | cpuconsumptiontime: 82609 s
[2025-12-04 03:45:49] 2025-12-04 02:44:48,477 | INFO     | nevents: 1000
[2025-12-04 03:45:49] 2025-12-04 02:44:48,477 | INFO     | neventsw: 0
[2025-12-04 03:45:49] 2025-12-04 02:44:48,477 | INFO     | pid: 178116
[2025-12-04 03:45:49] 2025-12-04 02:44:48,477 | INFO     | pgrp: 178116
[2025-12-04 03:45:49] 2025-12-04 02:44:48,477 | INFO     | corecount: 4
[2025-12-04 03:45:49] 2025-12-04 02:44:48,477 | INFO     | event service: False
[2025-12-04 03:45:49] 2025-12-04 02:44:48,477 | INFO     | sizes: {0: 2284450, 4: 2284712, 11: 2284740, 21191: 2339224, 21193: 2348224, 21194: 2348280, 21198: 2348654}
[2025-12-04 03:45:49] 2025-12-04 02:44:48,477 | INFO     | --------------------------------------------------
[2025-12-04 03:45:49] 2025-12-04 02:44:48,477 | INFO     | 
[2025-12-04 03:45:49] 2025-12-04 02:44:48,477 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-04 03:45:49] 2025-12-04 02:44:48,498 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-04 03:45:49] 2025-12-04 02:44:48,498 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-04 03:45:49] 2025-12-04 02:44:48,498 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-04 03:45:49] 2025-12-04 02:44:48,498 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-04 03:45:49] 2025-12-04 02:44:48,498 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-04 03:45:49] 2025-12-04 02:44:48,498 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-04 03:45:49] 2025-12-04 02:44:48,498 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-04 03:45:49] 2025-12-04 02:44:48,498 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-04 03:45:49] 2025-12-04 02:44:48,498 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-04 03:45:49] 2025-12-04 02:44:48,498 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-04 03:45:49] 2025-12-04 02:44:48,498 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-04 03:45:49] 2025-12-04 02:44:48,498 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-04 03:45:49] 2025-12-04 02:44:48,499 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-04 03:45:49] 2025-12-04 02:44:48,499 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-04 03:45:49] 2025-12-04 02:44:48,499 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-04 03:45:49] 2025-12-04 02:44:48,499 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-04 03:45:49] 2025-12-04 02:44:48,499 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-04 03:45:49] 2025-12-04 02:44:48,499 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-04 03:45:49] 2025-12-04 02:44:48,499 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-04 03:45:49] 2025-12-04 02:44:48,499 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-04 03:45:49] 2025-12-04 02:44:48,499 | INFO     | job 6896598327 has completed (purged errors)
[2025-12-04 03:45:49] 2025-12-04 02:44:48,499 | INFO     | overall cleanup function is called
[2025-12-04 03:45:49] 2025-12-04 02:44:49,508 | INFO     | --- collectZombieJob: --- 10, [178116]
[2025-12-04 03:45:49] 2025-12-04 02:44:49,509 | INFO     | zombie collector waiting for pid 178116
[2025-12-04 03:45:49] 2025-12-04 02:44:49,509 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-04 03:45:49] 2025-12-04 02:44:49,509 | INFO     | collected zombie processes
[2025-12-04 03:45:49] 2025-12-04 02:44:49,509 | INFO     | will attempt to kill all subprocesses of pid=178116
[2025-12-04 03:45:49] 2025-12-04 02:44:49,552 | INFO     | process IDs to be killed: [178116] (in reverse order)
[2025-12-04 03:45:49] 2025-12-04 02:44:49,585 | WARNING  | found no corresponding commands to process id(s)
[2025-12-04 03:45:49] 2025-12-04 02:44:49,586 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-04 03:45:49] 2025-12-04 02:44:49,587 | INFO     | did not find any defunct processes belonging to 178116
[2025-12-04 03:45:49] 2025-12-04 02:44:49,588 | INFO     | did not find any defunct processes belonging to 178116
[2025-12-04 03:45:49] 2025-12-04 02:44:49,589 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-04 03:45:49] 2025-12-04 02:44:49,589 | INFO     | ready for new job
[2025-12-04 03:45:49] 2025-12-04 02:44:49,589 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-04 03:45:49] 2025-12-04 02:44:49,590 | INFO     | ***************************************
[2025-12-04 03:45:49] 2025-12-04 02:44:49,591 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-04 03:45:49] 2025-12-04 02:44:49,591 | INFO     | ***************************************
[2025-12-04 03:45:49] 2025-12-04 02:44:49,591 | INFO     | 
[2025-12-04 03:45:49] 2025-12-04 02:44:49,591 | INFO     | architecture information:
[2025-12-04 03:45:49] 2025-12-04 02:44:49,591 | INFO     | executing command: cat /etc/os-release
[2025-12-04 03:45:49] 2025-12-04 02:44:49,606 | INFO     | cat /etc/os-release:
[2025-12-04 03:45:49] NAME="CentOS Linux"
[2025-12-04 03:45:49] VERSION="7 (Core)"
[2025-12-04 03:45:49] ID="centos"
[2025-12-04 03:45:49] ID_LIKE="rhel fedora"
[2025-12-04 03:45:49] VERSION_ID="7"
[2025-12-04 03:45:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-04 03:45:49] ANSI_COLOR="0;31"
[2025-12-04 03:45:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-04 03:45:49] HOME_URL="https://www.centos.org/"
[2025-12-04 03:45:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-04 03:45:49] 
[2025-12-04 03:45:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-04 03:45:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-04 03:45:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-04 03:45:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-04 03:45:49] 
[2025-12-04 03:45:49] 2025-12-04 02:44:49,606 | INFO     | ***************************************
[2025-12-04 03:45:49] 2025-12-04 02:44:50,110 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-04 03:45:49] 2025-12-04 02:44:50,128 | INFO     | sufficient remaining disk space (321897103360 B)
[2025-12-04 03:45:49] 2025-12-04 02:44:50,128 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-04 03:45:49] 2025-12-04 02:44:50,128 | INFO     | current server update state: UPDATING_FINAL
[2025-12-04 03:45:49] 2025-12-04 02:44:50,128 | INFO     | update_server=False
[2025-12-04 03:45:49] 2025-12-04 02:44:50,128 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-04 03:45:49] 2025-12-04 02:44:50,128 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-04 03:45:49] 2025-12-04 02:44:50,405 | INFO     | all job control threads have been joined
[2025-12-04 03:45:49] 2025-12-04 02:44:50,423 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-04 03:45:49] 2025-12-04 02:44:50,423 | INFO     | aborting loop
[2025-12-04 03:45:49] 2025-12-04 02:44:50,502 | INFO     | all payload control threads have been joined
[2025-12-04 03:45:49] 2025-12-04 02:44:50,744 | INFO     | all data control threads have been joined
[2025-12-04 03:45:49] 2025-12-04 02:44:50,769 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-04 03:45:49] 2025-12-04 02:44:51,134 | INFO     | [job] retrieve thread has finished
[2025-12-04 03:45:49] 2025-12-04 02:44:51,158 | INFO     | [payload] validate_pre thread has finished
[2025-12-04 03:45:49] 2025-12-04 02:44:51,411 | INFO     | [job] control thread has finished
[2025-12-04 03:45:49] 2025-12-04 02:44:51,429 | INFO     | [job] job monitor thread has finished
[2025-12-04 03:45:49] 2025-12-04 02:44:51,498 | INFO     | [payload] execute_payloads thread has finished
[2025-12-04 03:45:49] 2025-12-04 02:44:51,507 | INFO     | [payload] control thread has finished
[2025-12-04 03:45:49] 2025-12-04 02:44:51,750 | INFO     | [data] control thread has finished
[2025-12-04 03:45:49] 2025-12-04 02:44:51,875 | INFO     | [data] copytool_in thread has finished
[2025-12-04 03:45:49] 2025-12-04 02:44:52,140 | INFO     | [payload] validate_post thread has finished
[2025-12-04 03:45:49] 2025-12-04 02:44:52,408 | INFO     | [job] validate thread has finished
[2025-12-04 03:45:49] 2025-12-04 02:44:52,552 | INFO     | [job] create_data_payload thread has finished
[2025-12-04 03:45:49] 2025-12-04 02:44:52,608 | INFO     | [payload] failed_post thread has finished
[2025-12-04 03:45:49] 2025-12-04 02:44:52,775 | INFO     | [data] copytool_out thread has finished
[2025-12-04 03:45:49] 2025-12-04 02:44:53,098 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-04 03:45:49] 2025-12-04 02:44:54,104 | INFO     | [job] queue monitor thread has finished
[2025-12-04 03:45:49] 2025-12-04 02:44:54,135 | INFO     | [data] queue_monitor thread has finished
[2025-12-04 03:45:49] 2025-12-04 02:45:00,860 | INFO     | job.realtimelogging is not enabled
[2025-12-04 03:45:49] 2025-12-04 02:45:01,866 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-04 03:45:49] 2025-12-04 02:45:20,722 | INFO     | PID=170879 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-04 03:45:49] 2025-12-04 02:45:20,722 | INFO     | found 0 job(s) in 20 queues
[2025-12-04 03:45:49] 2025-12-04 02:45:20,722 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-04 03:45:49] 2025-12-04 02:45:20,722 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-04 03:45:49] 2025-12-04 02:45:44,272 | INFO     | [monitor] cgroup control has ended
[2025-12-04 03:45:49] 2025-12-04 02:45:44,602 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140195179489088)>', '<ExcThread(monitor, started 140194015594240)>']
[2025-12-04 03:45:49] 2025-12-04 02:45:44,839 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-04 03:45:49] 2025-12-04 02:45:44,839 | INFO     | [monitor] control thread has ended
[2025-12-04 03:45:49] 2025-12-04 02:45:49,628 | INFO     | all workflow threads have been joined
[2025-12-04 03:45:49] 2025-12-04 02:45:49,628 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-04 03:45:49] 2025-12-04 02:45:49,629 | INFO     | traces error code: 0
[2025-12-04 03:45:49] 2025-12-04 02:45:49,629 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-04 03:45:49] 2025-12-04 02:45:49,711 [wrapper] ==== pilot stdout END ====
[2025-12-04 03:45:49] 2025-12-04 02:45:49,715 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-04 03:45:49] 2025-12-04 02:45:49,719 [wrapper] pilotpid: 170879
[2025-12-04 03:45:49] 2025-12-04 02:45:49,723 [wrapper] Pilot exit status: 0
[2025-12-04 03:45:49] 2025-12-04 02:45:49,734 [wrapper] pandaids: 6896598327
[2025-12-04 03:45:49] 2025-12-04 02:45:49,758 [wrapper] cleanup supervisor_pilot  218749 170880
[2025-12-04 03:45:49] 2025-12-04 02:45:49,762 [wrapper] Test setup, not cleaning
[2025-12-04 03:45:49] 2025-12-04 02:45:49,766 [wrapper] apfmon messages muted
[2025-12-04 03:45:49] 2025-12-04 02:45:49,769 [wrapper] ==== wrapper stdout END ====
[2025-12-04 03:45:49] 2025-12-04 02:45:49,773 [wrapper] ==== wrapper stderr END ====
[2025-12-04 03:45:49]  *** Error codes and diagnostics ***
[2025-12-04 03:45:49]     "exeErrorCode": 0,
[2025-12-04 03:45:49]     "exeErrorDiag": "",
[2025-12-04 03:45:49]     "pilotErrorCode": 0,
[2025-12-04 03:45:49]     "pilotErrorDiag": "",
[2025-12-04 03:45:49]  *** Listing of results directory ***
[2025-12-04 03:45:49] total 1071936
[2025-12-04 03:45:49] -rw-r--r-- 1 boinc boinc    576529 Nov 28 11:28 pilot3.tar.gz
[2025-12-04 03:45:49] -rwx------ 1 boinc boinc     36292 Nov 28 11:28 runpilot2-wrapper.sh
[2025-12-04 03:45:49] -rw-r--r-- 1 boinc boinc      5112 Nov 28 11:32 queuedata.json
[2025-12-04 03:45:49] -rw-r--r-- 1 boinc boinc       100 Dec  3 21:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-04 03:45:49] -rwxr-xr-x 1 boinc boinc      7986 Dec  3 21:51 run_atlas
[2025-12-04 03:45:49] -rw-r--r-- 1 boinc boinc       105 Dec  3 21:51 job.xml
[2025-12-04 03:45:49] -rw-r--r-- 2 boinc boinc 375964409 Dec  3 21:51 EVNT.47528880._000008.pool.root.1
[2025-12-04 03:45:49] drwxrwx--x 2 boinc boinc      4096 Dec  3 21:51 shared
[2025-12-04 03:45:49] -rw-r--r-- 2 boinc boinc    590122 Dec  3 21:51 input.tar.gz
[2025-12-04 03:45:49] -rw-r--r-- 2 boinc boinc     15847 Dec  3 21:51 start_atlas.sh
[2025-12-04 03:45:49] -rw-r--r-- 1 boinc boinc         0 Dec  3 21:51 boinc_setup_complete
[2025-12-04 03:45:49] -rw-r--r-- 1 boinc boinc      6380 Dec  3 21:51 init_data.xml
[2025-12-04 03:45:49] -rw-r--r-- 1 boinc boinc         0 Dec  3 21:51 boinc_lockfile
[2025-12-04 03:45:49] -rw-r--r-- 1 boinc boinc      2878 Dec  3 21:51 pandaJob.out
[2025-12-04 03:45:49] -rw------- 1 boinc boinc    985959 Dec  3 21:51 agis_schedconf.cvmfs.json
[2025-12-04 03:45:49] drwx------ 5 boinc boinc      4096 Dec  3 21:51 pilot3
[2025-12-04 03:45:49] -rw-r--r-- 1 boinc boinc       532 Dec  4 03:40 boinc_task_state.xml
[2025-12-04 03:45:49] -rw------- 1 boinc boinc 709124133 Dec  4 03:44 HITS.47538121._000099.pool.root.1
[2025-12-04 03:45:49] -rw------- 1 boinc boinc      1027 Dec  4 03:44 memory_monitor_summary.json
[2025-12-04 03:45:49] -rw------- 1 boinc boinc   1516240 Dec  4 03:44 agis_ddmendpoints.agis.ALL.json
[2025-12-04 03:45:49] -rw------- 1 boinc boinc   1312940 Dec  4 03:44 log.47538121._000099.job.log.tgz.1
[2025-12-04 03:45:49] -rw------- 1 boinc boinc     27982 Dec  4 03:44 heartbeat.json
[2025-12-04 03:45:49] -rw------- 1 boinc boinc        95 Dec  4 03:45 pilot_heartbeat.json
[2025-12-04 03:45:49] -rw-r--r-- 1 boinc boinc      8192 Dec  4 03:45 boinc_mmap_file
[2025-12-04 03:45:49] -rw-r--r-- 1 boinc boinc        28 Dec  4 03:45 wrapper_checkpoint.txt
[2025-12-04 03:45:49] -rw------- 1 boinc boinc      4823 Dec  4 03:45 pilotlog.txt
[2025-12-04 03:45:49] -rw------- 1 boinc boinc   2996324 Dec  4 03:45 log.47538121._000099.job.log.1
[2025-12-04 03:45:49] -rw------- 1 boinc boinc       353 Dec  4 03:45 output.list
[2025-12-04 03:45:49] -rw-r--r-- 1 boinc boinc       620 Dec  4 03:45 runtime_log
[2025-12-04 03:45:49] -rw------- 1 boinc boinc   4352000 Dec  4 03:45 result.tar.gz
[2025-12-04 03:45:49] -rw-r--r-- 1 boinc boinc      8908 Dec  4 03:45 runtime_log.err
[2025-12-04 03:45:49] -rw------- 1 boinc boinc       667 Dec  4 03:45 rAmLDmttAj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzVOKDmUpoIJo.diag
[2025-12-04 03:45:49] -rw-r--r-- 1 boinc boinc     21222 Dec  4 03:45 stderr.txt
[2025-12-04 03:45:49] HITS file was successfully produced:
[2025-12-04 03:45:49] -rw------- 1 boinc boinc 709124133 Dec  4 03:44 shared/HITS.pool.root.1
[2025-12-04 03:45:49]  *** Contents of shared directory: ***
[2025-12-04 03:45:49] total 1064520
[2025-12-04 03:45:49] -rw-r--r-- 2 boinc boinc 375964409 Dec  3 21:51 ATLAS.root_0
[2025-12-04 03:45:49] -rw-r--r-- 2 boinc boinc    590122 Dec  3 21:51 input.tar.gz
[2025-12-04 03:45:49] -rw-r--r-- 2 boinc boinc     15847 Dec  3 21:51 start_atlas.sh
[2025-12-04 03:45:49] -rw------- 1 boinc boinc 709124133 Dec  4 03:44 HITS.pool.root.1
[2025-12-04 03:45:49] -rw------- 1 boinc boinc   4352000 Dec  4 03:45 result.tar.gz
03:45:51 (167074): run_atlas exited; CPU time 82577.593604
03:45:51 (167074): called boinc_finish(0)

</stderr_txt>
]]>

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