Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:11:04 (11656): wrapper (7.7.26015): starting
09:11:04 (11656): wrapper: running run_atlas (--nthreads 8)
[2025-12-01 09:11:04] Arguments: --nthreads 8
[2025-12-01 09:11:04] Threads: 8
[2025-12-01 09:11:04] Checking for CVMFS
[2025-12-01 09:11:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 09:11:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 09:11:04] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 09:11:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 09:11:04] 2.11.2.0 2756 80604 87864 153519 2 69 11034157 20275200 1 130560 0 25218136 99.909 4034491 31619 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-01 09:11:04] CVMFS is ok
[2025-12-01 09:11:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 09:11:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 09:11:04] Further information can be found at the LHC@home message board.
[2025-12-01 09:11:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 09:11:04] Checking for apptainer binary...
[2025-12-01 09:11:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 09:11:04] Running /usr/bin/apptainer --version
[2025-12-01 09:11:04] apptainer version 1.3.2-1.el7
[2025-12-01 09:11:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 09:11:06] c-115-14.aglt2.org
[2025-12-01 09:11:06] apptainer works
[2025-12-01 09:11:06] Set ATHENA_PROC_NUMBER=8
[2025-12-01 09:11:06] Set ATHENA_CORE_NUMBER=8
[2025-12-01 09:11:06] Starting ATLAS job with PandaID=6897017169
[2025-12-01 09:11:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 19:08:29]  *** The last 200 lines of the pilot log: ***
[2025-12-01 19:08:29] 2025-12-02 00:07:32,921 | INFO     | monitor loop #2648: job 0:6897017169 is in state 'finished'
[2025-12-01 19:08:29] 2025-12-02 00:07:32,921 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-01 19:08:29] 2025-12-02 00:07:32,969 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-01 19:08:29] 2025-12-02 00:07:32,972 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.625
[2025-12-01 19:08:29] 2025-12-02 00:07:32,974 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897017169/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 19:08:29] 2025-12-02 00:07:32,975 | INFO     | extracted standard info from prmon json
[2025-12-01 19:08:29] 2025-12-02 00:07:32,975 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 19:08:29] 2025-12-02 00:07:32,975 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 19:08:29] 2025-12-02 00:07:32,984 | INFO     | fitting pss+swap vs Time
[2025-12-01 19:08:29] 2025-12-02 00:07:32,985 | INFO     | sum of square deviations: 62398419320.99854
[2025-12-01 19:08:29] 2025-12-02 00:07:32,992 | INFO     | sum of deviations: 678107451312.3466
[2025-12-01 19:08:29] 2025-12-02 00:07:32,992 | INFO     | mean x: 1764616163.0017066
[2025-12-01 19:08:29] 2025-12-02 00:07:32,992 | INFO     | mean y: 3542837.651877133
[2025-12-01 19:08:29] 2025-12-02 00:07:32,992 | INFO     | intersect: -19173214872.859158
[2025-12-01 19:08:29] 2025-12-02 00:07:32,993 | INFO     | chi2: 5.790147877680719
[2025-12-01 19:08:29] 2025-12-02 00:07:32,994 | INFO     | sum of square deviations: 60814879297.22892
[2025-12-01 19:08:29] 2025-12-02 00:07:33,002 | INFO     | sum of deviations: 915403947474.9165
[2025-12-01 19:08:29] 2025-12-02 00:07:33,002 | INFO     | mean x: 1764616010.5060241
[2025-12-01 19:08:29] 2025-12-02 00:07:33,002 | INFO     | mean y: 3565676.452667814
[2025-12-01 19:08:29] 2025-12-02 00:07:33,002 | INFO     | intersect: -26557967955.7987
[2025-12-01 19:08:29] 2025-12-02 00:07:33,003 | INFO     | chi2: 2.597450219792568
[2025-12-01 19:08:29] 2025-12-02 00:07:33,003 | INFO     | current chi2=2.597450219792568 (change=55.14017474743679 %)
[2025-12-01 19:08:29] 2025-12-02 00:07:33,003 | INFO     | sum of square deviations: 59258292275.972336
[2025-12-01 19:08:29] 2025-12-02 00:07:33,010 | INFO     | sum of deviations: 924938888969.5703
[2025-12-01 19:08:29] 2025-12-02 00:07:33,010 | INFO     | mean x: 1764615858.0069444
[2025-12-01 19:08:29] 2025-12-02 00:07:33,010 | INFO     | mean y: 3566595.607638889
[2025-12-01 19:08:29] 2025-12-02 00:07:33,010 | INFO     | intersect: -27539613750.560158
[2025-12-01 19:08:29] 2025-12-02 00:07:33,011 | INFO     | chi2: 2.4863645646113506
[2025-12-01 19:08:29] 2025-12-02 00:07:33,011 | INFO     | current chi2=2.4863645646113506 (change=4.276719312452835 %)
[2025-12-01 19:08:29] 2025-12-02 00:07:33,011 | INFO     | right removable region: 575
[2025-12-01 19:08:29] 2025-12-02 00:07:33,012 | INFO     | sum of square deviations: 60814699957.228874
[2025-12-01 19:08:29] 2025-12-02 00:07:33,018 | INFO     | sum of deviations: 478121763036.8429
[2025-12-01 19:08:29] 2025-12-02 00:07:33,018 | INFO     | mean x: 1764616315.5060241
[2025-12-01 19:08:29] 2025-12-02 00:07:33,019 | INFO     | mean y: 3562054.7590361447
[2025-12-01 19:08:29] 2025-12-02 00:07:33,019 | INFO     | intersect: -13869752529.489431
[2025-12-01 19:08:29] 2025-12-02 00:07:33,019 | INFO     | chi2: 3.4901621313512705
[2025-12-01 19:08:29] 2025-12-02 00:07:33,019 | INFO     | current chi2=3.4901621313512705 (change=39.722400790404734 %)
[2025-12-01 19:08:29] 2025-12-02 00:07:33,020 | INFO     | sum of square deviations: 59258040040.95666
[2025-12-01 19:08:29] 2025-12-02 00:07:33,027 | INFO     | sum of deviations: 430834968581.85205
[2025-12-01 19:08:29] 2025-12-02 00:07:33,027 | INFO     | mean x: 1764616468.0086806
[2025-12-01 19:08:29] 2025-12-02 00:07:33,027 | INFO     | mean y: 3566686.029513889
[2025-12-01 19:08:29] 2025-12-02 00:07:33,027 | INFO     | intersect: -12826059133.995584
[2025-12-01 19:08:29] 2025-12-02 00:07:33,028 | INFO     | chi2: 3.4330498129697222
[2025-12-01 19:08:29] 2025-12-02 00:07:33,028 | INFO     | current chi2=3.4330498129697222 (change=1.6363800944524134 %)
[2025-12-01 19:08:29] 2025-12-02 00:07:33,028 | INFO     | left removable region: 20
[2025-12-01 19:08:29] 2025-12-02 00:07:33,029 | INFO     | sum of square deviations: 53010302366.64822
[2025-12-01 19:08:29] 2025-12-02 00:07:33,035 | INFO     | sum of deviations: 609219009800.4598
[2025-12-01 19:08:29] 2025-12-02 00:07:33,035 | INFO     | mean x: 1764616437.5135136
[2025-12-01 19:08:29] 2025-12-02 00:07:33,035 | INFO     | mean y: 3597934.738738739
[2025-12-01 19:08:29] 2025-12-02 00:07:33,035 | INFO     | intersect: -20276193553.79208
[2025-12-01 19:08:29] 2025-12-02 00:07:33,036 | INFO     | chi2: 0.06504898292652384
[2025-12-01 19:08:29] 2025-12-02 00:07:33,036 | INFO     | current memory leak: 11.49 B/s (using 555 data points, chi2=0.07)
[2025-12-01 19:08:29] 2025-12-02 00:07:33,036 | INFO     | could have reported an average CPU frequency of 2357 MHz (23 samples)
[2025-12-01 19:08:29] 2025-12-02 00:07:33,036 | INFO     | ..............................
[2025-12-01 19:08:29] 2025-12-02 00:07:33,037 | INFO     | . Timing measurements:
[2025-12-01 19:08:29] 2025-12-02 00:07:33,037 | INFO     | . get job = 0 s
[2025-12-01 19:08:29] 2025-12-02 00:07:33,037 | INFO     | . initial setup = 2 s
[2025-12-01 19:08:29] 2025-12-02 00:07:33,037 | INFO     | . payload setup = 14 s
[2025-12-01 19:08:29] 2025-12-02 00:07:33,037 | INFO     | . stage-in = 0 s
[2025-12-01 19:08:29] 2025-12-02 00:07:33,037 | INFO     | . payload execution = 35723 s
[2025-12-01 19:08:29] 2025-12-02 00:07:33,037 | INFO     | . stage-out = 3 s
[2025-12-01 19:08:29] 2025-12-02 00:07:33,037 | INFO     | . log creation = 0 s
[2025-12-01 19:08:29] 2025-12-02 00:07:33,038 | INFO     | ..............................
[2025-12-01 19:08:29] 2025-12-02 00:07:33,245 | INFO     | 
[2025-12-01 19:08:29] 2025-12-02 00:07:33,246 | INFO     | job summary report
[2025-12-01 19:08:29] 2025-12-02 00:07:33,246 | INFO     | --------------------------------------------------
[2025-12-01 19:08:29] 2025-12-02 00:07:33,246 | INFO     | PanDA job id: 6897017169
[2025-12-01 19:08:29] 2025-12-02 00:07:33,247 | INFO     | task id: 47531058
[2025-12-01 19:08:29] 2025-12-02 00:07:33,247 | INFO     | errors: (none)
[2025-12-01 19:08:29] 2025-12-02 00:07:33,247 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 19:08:29] 2025-12-02 00:07:33,247 | INFO     | pilot state: finished 
[2025-12-01 19:08:29] 2025-12-02 00:07:33,247 | INFO     | transexitcode: 0
[2025-12-01 19:08:29] 2025-12-02 00:07:33,247 | INFO     | exeerrorcode: 0
[2025-12-01 19:08:29] 2025-12-02 00:07:33,248 | INFO     | exeerrordiag: 
[2025-12-01 19:08:29] 2025-12-02 00:07:33,248 | INFO     | exitcode: 0
[2025-12-01 19:08:29] 2025-12-02 00:07:33,248 | INFO     | exitmsg: OK
[2025-12-01 19:08:29] 2025-12-02 00:07:33,248 | INFO     | cpuconsumptiontime: 277283 s
[2025-12-01 19:08:29] 2025-12-02 00:07:33,248 | INFO     | nevents: 1000
[2025-12-01 19:08:29] 2025-12-02 00:07:33,248 | INFO     | neventsw: 0
[2025-12-01 19:08:29] 2025-12-02 00:07:33,248 | INFO     | pid: 22570
[2025-12-01 19:08:29] 2025-12-02 00:07:33,248 | INFO     | pgrp: 22570
[2025-12-01 19:08:29] 2025-12-02 00:07:33,249 | INFO     | corecount: 8
[2025-12-01 19:08:29] 2025-12-02 00:07:33,249 | INFO     | event service: False
[2025-12-01 19:08:29] 2025-12-02 00:07:33,249 | INFO     | sizes: {0: 2284444, 1: 2284444, 6: 2284734, 11: 2284762, 35741: 2345624, 35742: 2345623, 35745: 2354801, 35746: 2354857, 35752: 2355103}
[2025-12-01 19:08:29] 2025-12-02 00:07:33,249 | INFO     | --------------------------------------------------
[2025-12-01 19:08:29] 2025-12-02 00:07:33,249 | INFO     | 
[2025-12-01 19:08:29] 2025-12-02 00:07:33,249 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-01 19:08:29] 2025-12-02 00:07:33,276 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 19:08:29] 2025-12-02 00:07:33,277 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 19:08:29] 2025-12-02 00:07:33,277 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 19:08:29] 2025-12-02 00:07:33,277 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 19:08:29] 2025-12-02 00:07:33,277 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 19:08:29] 2025-12-02 00:07:33,278 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 19:08:29] 2025-12-02 00:07:33,278 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 19:08:29] 2025-12-02 00:07:33,278 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 19:08:29] 2025-12-02 00:07:33,278 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 19:08:29] 2025-12-02 00:07:33,279 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 19:08:29] 2025-12-02 00:07:33,279 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 19:08:29] 2025-12-02 00:07:33,279 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 19:08:29] 2025-12-02 00:07:33,279 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 19:08:29] 2025-12-02 00:07:33,279 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 19:08:29] 2025-12-02 00:07:33,280 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 19:08:29] 2025-12-02 00:07:33,280 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 19:08:29] 2025-12-02 00:07:33,280 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 19:08:29] 2025-12-02 00:07:33,280 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 19:08:29] 2025-12-02 00:07:33,280 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 19:08:29] 2025-12-02 00:07:33,281 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 19:08:29] 2025-12-02 00:07:33,281 | INFO     | job 6897017169 has completed (purged errors)
[2025-12-01 19:08:29] 2025-12-02 00:07:33,281 | INFO     | overall cleanup function is called
[2025-12-01 19:08:29] 2025-12-02 00:07:34,298 | INFO     | --- collectZombieJob: --- 10, [22570]
[2025-12-01 19:08:29] 2025-12-02 00:07:34,298 | INFO     | zombie collector waiting for pid 22570
[2025-12-01 19:08:29] 2025-12-02 00:07:34,298 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 19:08:29] 2025-12-02 00:07:34,298 | INFO     | collected zombie processes
[2025-12-01 19:08:29] 2025-12-02 00:07:34,299 | INFO     | will attempt to kill all subprocesses of pid=22570
[2025-12-01 19:08:29] 2025-12-02 00:07:34,386 | INFO     | process IDs to be killed: [22570] (in reverse order)
[2025-12-01 19:08:29] 2025-12-02 00:07:34,447 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 19:08:29] 2025-12-02 00:07:34,448 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 19:08:29] 2025-12-02 00:07:34,465 | INFO     | did not find any defunct processes belonging to 22570
[2025-12-01 19:08:29] 2025-12-02 00:07:34,467 | INFO     | did not find any defunct processes belonging to 22570
[2025-12-01 19:08:29] 2025-12-02 00:07:34,470 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 19:08:29] 2025-12-02 00:07:34,471 | INFO     | ready for new job
[2025-12-01 19:08:29] 2025-12-02 00:07:34,471 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 19:08:29] 2025-12-02 00:07:34,474 | INFO     | ***************************************
[2025-12-01 19:08:29] 2025-12-02 00:07:34,474 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 19:08:29] 2025-12-02 00:07:34,474 | INFO     | ***************************************
[2025-12-01 19:08:29] 2025-12-02 00:07:34,474 | INFO     | 
[2025-12-01 19:08:29] 2025-12-02 00:07:34,475 | INFO     | architecture information:
[2025-12-01 19:08:29] 2025-12-02 00:07:34,476 | INFO     | executing command: cat /etc/os-release
[2025-12-01 19:08:29] 2025-12-02 00:07:34,494 | INFO     | cat /etc/os-release:
[2025-12-01 19:08:29] NAME="CentOS Linux"
[2025-12-01 19:08:29] VERSION="7 (Core)"
[2025-12-01 19:08:29] ID="centos"
[2025-12-01 19:08:29] ID_LIKE="rhel fedora"
[2025-12-01 19:08:29] VERSION_ID="7"
[2025-12-01 19:08:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 19:08:29] ANSI_COLOR="0;31"
[2025-12-01 19:08:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 19:08:29] HOME_URL="https://www.centos.org/"
[2025-12-01 19:08:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 19:08:29] 
[2025-12-01 19:08:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 19:08:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 19:08:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 19:08:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 19:08:29] 
[2025-12-01 19:08:29] 2025-12-02 00:07:34,494 | INFO     | ***************************************
[2025-12-01 19:08:29] 2025-12-02 00:07:34,998 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-01 19:08:29] 2025-12-02 00:07:35,018 | INFO     | sufficient remaining disk space (17750294528 B)
[2025-12-01 19:08:29] 2025-12-02 00:07:35,018 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 19:08:29] 2025-12-02 00:07:35,019 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 19:08:29] 2025-12-02 00:07:35,019 | INFO     | update_server=False
[2025-12-01 19:08:29] 2025-12-02 00:07:35,019 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 19:08:29] 2025-12-02 00:07:35,019 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 19:08:29] 2025-12-02 00:07:35,020 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 19:08:29] 2025-12-02 00:07:35,133 | INFO     | all data control threads have been joined
[2025-12-01 19:08:29] 2025-12-02 00:07:35,366 | INFO     | all job control threads have been joined
[2025-12-01 19:08:29] 2025-12-02 00:07:35,425 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-01 19:08:29] 2025-12-02 00:07:35,425 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-01 19:08:29] 2025-12-02 00:07:35,425 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 19:08:29] 2025-12-02 00:07:35,425 | INFO     | will abort loop
[2025-12-01 19:08:29] 2025-12-02 00:07:35,951 | INFO     | all payload control threads have been joined
[2025-12-01 19:08:29] 2025-12-02 00:07:36,024 | INFO     | [job] retrieve thread has finished
[2025-12-01 19:08:29] 2025-12-02 00:07:36,025 | INFO     | [job] queue monitor thread has finished
[2025-12-01 19:08:29] 2025-12-02 00:07:36,047 | INFO     | [job] validate thread has finished
[2025-12-01 19:08:29] 2025-12-02 00:07:36,052 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 19:08:29] 2025-12-02 00:07:36,061 | INFO     | [data] copytool_in thread has finished
[2025-12-01 19:08:29] 2025-12-02 00:07:36,139 | INFO     | [data] control thread has finished
[2025-12-01 19:08:29] 2025-12-02 00:07:36,169 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 19:08:29] 2025-12-02 00:07:36,278 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 19:08:29] 2025-12-02 00:07:36,368 | INFO     | [job] control thread has finished
[2025-12-01 19:08:29] 2025-12-02 00:07:36,431 | INFO     | [job] job monitor thread has finished
[2025-12-01 19:08:29] 2025-12-02 00:07:36,474 | INFO     | [payload] validate_post thread has finished
[2025-12-01 19:08:29] 2025-12-02 00:07:36,781 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 19:08:29] 2025-12-02 00:07:36,956 | INFO     | [payload] control thread has finished
[2025-12-01 19:08:29] 2025-12-02 00:07:37,026 | INFO     | [data] copytool_out thread has finished
[2025-12-01 19:08:29] 2025-12-02 00:07:37,595 | INFO     | [payload] failed_post thread has finished
[2025-12-01 19:08:29] 2025-12-02 00:07:37,853 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 19:08:29] 2025-12-02 00:07:41,860 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 19:08:29] 2025-12-02 00:08:05,639 | INFO     | PID=15505 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-01 19:08:29] 2025-12-02 00:08:05,639 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 19:08:29] 2025-12-02 00:08:05,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 19:08:29] 2025-12-02 00:08:05,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 19:08:29] 2025-12-02 00:08:22,495 | INFO     | [monitor] cgroup control has ended
[2025-12-01 19:08:29] 2025-12-02 00:08:24,391 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139804163794752)>', '<ExcThread(monitor, started 139803559438080)>']
[2025-12-01 19:08:29] 2025-12-02 00:08:24,733 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 19:08:29] 2025-12-02 00:08:24,733 | INFO     | [monitor] control thread has ended
[2025-12-01 19:08:29] 2025-12-02 00:08:29,406 | INFO     | all workflow threads have been joined
[2025-12-01 19:08:29] 2025-12-02 00:08:29,406 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 19:08:29] 2025-12-02 00:08:29,407 | INFO     | traces error code: 0
[2025-12-01 19:08:29] 2025-12-02 00:08:29,408 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 19:08:29] 2025-12-02 00:08:29,529 [wrapper] ==== pilot stdout END ====
[2025-12-01 19:08:29] 2025-12-02 00:08:29,533 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 19:08:29] 2025-12-02 00:08:29,538 [wrapper] pilotpid: 15505
[2025-12-01 19:08:29] 2025-12-02 00:08:29,542 [wrapper] Pilot exit status: 0
[2025-12-01 19:08:29] 2025-12-02 00:08:29,557 [wrapper] pandaids: 6897017169
[2025-12-01 19:08:29] 2025-12-02 00:08:29,601 [wrapper] cleanup supervisor_pilot 29787 15506
[2025-12-01 19:08:29] 2025-12-02 00:08:29,606 [wrapper] Test setup, not cleaning
[2025-12-01 19:08:29] 2025-12-02 00:08:29,610 [wrapper] apfmon messages muted
[2025-12-01 19:08:29] 2025-12-02 00:08:29,615 [wrapper] ==== wrapper stdout END ====
[2025-12-01 19:08:29] 2025-12-02 00:08:29,620 [wrapper] ==== wrapper stderr END ====
[2025-12-01 19:08:29]  *** Error codes and diagnostics ***
[2025-12-01 19:08:29]     "exeErrorCode": 0,
[2025-12-01 19:08:29]     "exeErrorDiag": "",
[2025-12-01 19:08:29]     "pilotErrorCode": 0,
[2025-12-01 19:08:29]     "pilotErrorDiag": "",
[2025-12-01 19:08:29]  *** Listing of results directory ***
[2025-12-01 19:08:29] total 1077024
[2025-12-01 19:08:29] -rw-r--r-- 1 boincer umatlas    576529 Nov 28 05:28 pilot3.tar.gz
[2025-12-01 19:08:29] -rwx------ 1 boincer umatlas     36292 Nov 28 05:28 runpilot2-wrapper.sh
[2025-12-01 19:08:29] -rw-r--r-- 1 boincer umatlas      5112 Nov 28 05:30 queuedata.json
[2025-12-01 19:08:29] -rw-r--r-- 1 boincer umatlas       100 Dec  1 09:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 19:08:29] -rwxr-xr-x 1 boincer umatlas      7986 Dec  1 09:11 run_atlas
[2025-12-01 19:08:29] -rw-r--r-- 1 boincer umatlas       105 Dec  1 09:11 job.xml
[2025-12-01 19:08:29] -rw-r--r-- 2 boincer umatlas 375562970 Dec  1 09:11 EVNT.47531050._000455.pool.root.1
[2025-12-01 19:08:29] -rw-r--r-- 2 boincer umatlas     15847 Dec  1 09:11 start_atlas.sh
[2025-12-01 19:08:29] drwxrwx--x 2 boincer umatlas      4096 Dec  1 09:11 shared
[2025-12-01 19:08:29] -rw-r--r-- 2 boincer umatlas    590119 Dec  1 09:11 input.tar.gz
[2025-12-01 19:08:29] -rw-r--r-- 1 boincer umatlas         0 Dec  1 09:11 boinc_lockfile
[2025-12-01 19:08:29] -rw-r--r-- 1 boincer umatlas      2876 Dec  1 09:11 pandaJob.out
[2025-12-01 19:08:29] -rw------- 1 boincer umatlas        57 Dec  1 09:11 setup.sh.local
[2025-12-01 19:08:29] -rw------- 1 boincer umatlas    992150 Dec  1 09:11 agis_schedconf.cvmfs.json
[2025-12-01 19:08:29] drwx------ 5 boincer umatlas      4096 Dec  1 09:11 pilot3
[2025-12-01 19:08:29] -rw-r--r-- 1 boincer umatlas       532 Dec  1 18:59 boinc_task_state.xml
[2025-12-01 19:08:29] -rw-r--r-- 1 boincer umatlas      5913 Dec  1 19:04 init_data.xml
[2025-12-01 19:08:29] -rw------- 1 boincer umatlas 709523401 Dec  1 19:07 HITS.47531058._000701.pool.root.1
[2025-12-01 19:08:29] -rw------- 1 boincer umatlas      1075 Dec  1 19:07 memory_monitor_summary.json
[2025-12-01 19:08:29] -rw------- 1 boincer umatlas   1516240 Dec  1 19:07 agis_ddmendpoints.agis.ALL.json
[2025-12-01 19:08:29] -rw------- 1 boincer umatlas   1946676 Dec  1 19:07 log.47531058._000701.job.log.tgz.1
[2025-12-01 19:08:29] -rw------- 1 boincer umatlas        95 Dec  1 19:07 pilot_heartbeat.json
[2025-12-01 19:08:29] -rw------- 1 boincer umatlas     28072 Dec  1 19:07 heartbeat.json
[2025-12-01 19:08:29] -rw-r--r-- 1 boincer umatlas      8192 Dec  1 19:07 boinc_mmap_file
[2025-12-01 19:08:29] -rw-r--r-- 1 boincer umatlas        29 Dec  1 19:07 wrapper_checkpoint.txt
[2025-12-01 19:08:29] -rw------- 1 boincer umatlas      4932 Dec  1 19:08 pilotlog.txt
[2025-12-01 19:08:29] -rw------- 1 boincer umatlas   4961857 Dec  1 19:08 log.47531058._000701.job.log.1
[2025-12-01 19:08:29] -rw------- 1 boincer umatlas       353 Dec  1 19:08 output.list
[2025-12-01 19:08:29] -rw-r--r-- 1 boincer umatlas       620 Dec  1 19:08 runtime_log
[2025-12-01 19:08:29] -rw------- 1 boincer umatlas   6952960 Dec  1 19:08 result.tar.gz
[2025-12-01 19:08:29] -rw------- 1 boincer umatlas       668 Dec  1 19:08 xa0LDmXtAj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQTOKDmaXEUDm.diag
[2025-12-01 19:08:29] -rw-r--r-- 1 boincer umatlas      9343 Dec  1 19:08 runtime_log.err
[2025-12-01 19:08:29] -rw-r--r-- 1 boincer umatlas     21321 Dec  1 19:08 stderr.txt
[2025-12-01 19:08:29] HITS file was successfully produced:
[2025-12-01 19:08:29] -rw------- 1 boincer umatlas 709523401 Dec  1 19:07 shared/HITS.pool.root.1
[2025-12-01 19:08:29]  *** Contents of shared directory: ***
[2025-12-01 19:08:29] total 1067056
[2025-12-01 19:08:29] -rw-r--r-- 2 boincer umatlas 375562970 Dec  1 09:11 ATLAS.root_0
[2025-12-01 19:08:29] -rw-r--r-- 2 boincer umatlas     15847 Dec  1 09:11 start_atlas.sh
[2025-12-01 19:08:29] -rw-r--r-- 2 boincer umatlas    590119 Dec  1 09:11 input.tar.gz
[2025-12-01 19:08:29] -rw------- 1 boincer umatlas 709523401 Dec  1 19:07 HITS.pool.root.1
[2025-12-01 19:08:29] -rw------- 1 boincer umatlas   6952960 Dec  1 19:08 result.tar.gz
19:08:31 (11656): run_atlas exited; CPU time 274290.479461
19:08:31 (11656): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN