Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:20:21 (9338): wrapper (7.7.26015): starting
07:20:21 (9338): wrapper: running run_atlas (--nthreads 12)
[2025-12-01 07:20:21] Arguments: --nthreads 12
[2025-12-01 07:20:21] Threads: 12
[2025-12-01 07:20:21] Checking for CVMFS
[2025-12-01 07:20:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 07:20:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 07:20:21] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 07:20:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 07:20:21] 2.11.2.0 2981 294828 89956 153516 3 61 12759229 20275200 1 130560 1 134011599 99.964 17754000 14710 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-01 07:20:21] CVMFS is ok
[2025-12-01 07:20:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 07:20:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 07:20:21] Further information can be found at the LHC@home message board.
[2025-12-01 07:20:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 07:20:21] Checking for apptainer binary...
[2025-12-01 07:20:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 07:20:21] Running /usr/bin/apptainer --version
[2025-12-01 07:20:21] apptainer version 1.3.2-1.el7
[2025-12-01 07:20:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 07:20:23] c-205-30.aglt2.org
[2025-12-01 07:20:23] apptainer works
[2025-12-01 07:20:23] Set ATHENA_PROC_NUMBER=12
[2025-12-01 07:20:23] Set ATHENA_CORE_NUMBER=12
[2025-12-01 07:20:23] Starting ATLAS job with PandaID=6900801339
[2025-12-01 07:20:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 13:38:19]  *** The last 200 lines of the pilot log: ***
[2025-12-01 13:38:19] 2025-12-01 18:37:17,554 | INFO     | fitting pss+swap vs Time
[2025-12-01 13:38:19] 2025-12-01 18:37:17,554 | INFO     | sum of square deviations: 15706414885.743263
[2025-12-01 13:38:19] 2025-12-01 18:37:17,557 | INFO     | sum of deviations: 329819477684.2024
[2025-12-01 13:38:19] 2025-12-01 18:37:17,558 | INFO     | mean x: 1764602928.6351352
[2025-12-01 13:38:19] 2025-12-01 18:37:17,558 | INFO     | mean y: 3980767.445945946
[2025-12-01 13:38:19] 2025-12-01 18:37:17,558 | INFO     | intersect: -37050969103.43368
[2025-12-01 13:38:19] 2025-12-01 18:37:17,558 | INFO     | sufficient remaining disk space (28513927168 B)
[2025-12-01 13:38:19] 2025-12-01 18:37:17,559 | INFO     | chi2: 6.582576982262869
[2025-12-01 13:38:19] 2025-12-01 18:37:17,560 | INFO     | sum of square deviations: 15078241613.150717
[2025-12-01 13:38:19] 2025-12-01 18:37:17,563 | INFO     | sum of deviations: 506147547077.1645
[2025-12-01 13:38:19] 2025-12-01 18:37:17,563 | INFO     | mean x: 1764602776.1369863
[2025-12-01 13:38:19] 2025-12-01 18:37:17,563 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-12-01 13:38:19] 2025-12-01 18:37:17,563 | INFO     | mean y: 4023548.076712329
[2025-12-01 13:38:19] 2025-12-01 18:37:17,563 | INFO     | intersect: -59230294989.9892
[2025-12-01 13:38:19] 2025-12-01 18:37:17,564 | INFO     | chi2: 3.1362046386600384
[2025-12-01 13:38:19] 2025-12-01 18:37:17,564 | INFO     | current chi2=3.1362046386600384 (change=52.35597476321626 %)
[2025-12-01 13:38:19] 2025-12-01 18:37:17,564 | INFO     | sum of square deviations: 14467045403.055622
[2025-12-01 13:38:19] 2025-12-01 18:37:17,567 | INFO     | sum of deviations: 551604104588.8331
[2025-12-01 13:38:19] 2025-12-01 18:37:17,567 | INFO     | mean x: 1764602623.6388888
[2025-12-01 13:38:19] 2025-12-01 18:37:17,568 | INFO     | mean y: 4034814.283333333
[2025-12-01 13:38:19] 2025-12-01 18:37:17,568 | INFO     | intersect: -67277294790.29845
[2025-12-01 13:38:19] 2025-12-01 18:37:17,568 | INFO     | chi2: 2.6389121623080687
[2025-12-01 13:38:19] 2025-12-01 18:37:17,568 | INFO     | current chi2=2.6389121623080687 (change=15.856505988857947 %)
[2025-12-01 13:38:19] 2025-12-01 18:37:17,569 | INFO     | right removable region: 359
[2025-12-01 13:38:19] 2025-12-01 18:37:17,569 | INFO     | sum of square deviations: 15078211113.150715
[2025-12-01 13:38:19] 2025-12-01 18:37:17,572 | INFO     | sum of deviations: 180984600246.84933
[2025-12-01 13:38:19] 2025-12-01 18:37:17,572 | INFO     | mean x: 1764603081.1369863
[2025-12-01 13:38:19] 2025-12-01 18:37:17,572 | INFO     | mean y: 4016790.463013699
[2025-12-01 13:38:19] 2025-12-01 18:37:17,572 | INFO     | intersect: -21176611391.310863
[2025-12-01 13:38:19] 2025-12-01 18:37:17,573 | INFO     | chi2: 4.138908369018252
[2025-12-01 13:38:19] 2025-12-01 18:37:17,573 | INFO     | current chi2=4.138908369018252 (change=37.12328195825467 %)
[2025-12-01 13:38:19] 2025-12-01 18:37:17,574 | INFO     | sum of square deviations: 14467050705.863848
[2025-12-01 13:38:19] 2025-12-01 18:37:17,576 | INFO     | sum of deviations: 145533244781.64432
[2025-12-01 13:38:19] 2025-12-01 18:37:17,577 | INFO     | mean x: 1764603233.6305556
[2025-12-01 13:38:19] 2025-12-01 18:37:17,577 | INFO     | mean y: 4025629.177777778
[2025-12-01 13:38:19] 2025-12-01 18:37:17,577 | INFO     | intersect: -17747238229.899323
[2025-12-01 13:38:19] 2025-12-01 18:37:17,577 | INFO     | chi2: 4.074946230522425
[2025-12-01 13:38:19] 2025-12-01 18:37:17,578 | INFO     | current chi2=4.074946230522425 (change=1.5453866767047835 %)
[2025-12-01 13:38:19] 2025-12-01 18:37:17,578 | INFO     | left removable region: 20
[2025-12-01 13:38:19] 2025-12-01 18:37:17,578 | INFO     | sum of square deviations: 12080171638.28911
[2025-12-01 13:38:19] 2025-12-01 18:37:17,581 | INFO     | sum of deviations: 315465951298.10315
[2025-12-01 13:38:19] 2025-12-01 18:37:17,581 | INFO     | mean x: 1764603203.1297934
[2025-12-01 13:38:19] 2025-12-01 18:37:17,581 | INFO     | mean y: 4095384.474926254
[2025-12-01 13:38:19] 2025-12-01 18:37:17,581 | INFO     | intersect: -46077387959.2386
[2025-12-01 13:38:19] 2025-12-01 18:37:17,582 | INFO     | chi2: 0.05028308751776912
[2025-12-01 13:38:19] 2025-12-01 18:37:17,582 | INFO     | current memory leak: 26.11 B/s (using 339 data points, chi2=0.05)
[2025-12-01 13:38:19] 2025-12-01 18:37:17,582 | INFO     | could have reported an average CPU frequency of 2384 MHz (16 samples)
[2025-12-01 13:38:19] 2025-12-01 18:37:17,582 | INFO     | ..............................
[2025-12-01 13:38:19] 2025-12-01 18:37:17,582 | INFO     | . Timing measurements:
[2025-12-01 13:38:19] 2025-12-01 18:37:17,583 | INFO     | . get job = 0 s
[2025-12-01 13:38:19] 2025-12-01 18:37:17,583 | INFO     | . initial setup = 2 s
[2025-12-01 13:38:19] 2025-12-01 18:37:17,583 | INFO     | . payload setup = 13 s
[2025-12-01 13:38:19] 2025-12-01 18:37:17,583 | INFO     | . stage-in = 0 s
[2025-12-01 13:38:19] 2025-12-01 18:37:17,583 | INFO     | . payload execution = 22557 s
[2025-12-01 13:38:19] 2025-12-01 18:37:17,583 | INFO     | . stage-out = 3 s
[2025-12-01 13:38:19] 2025-12-01 18:37:17,583 | INFO     | . log creation = 0 s
[2025-12-01 13:38:19] 2025-12-01 18:37:17,583 | INFO     | ..............................
[2025-12-01 13:38:19] 2025-12-01 18:37:17,632 | INFO     | time since job start (22599s) is within the limit (172800.0s)
[2025-12-01 13:38:19] 2025-12-01 18:37:17,665 | INFO     | 
[2025-12-01 13:38:19] 2025-12-01 18:37:17,666 | INFO     | job summary report
[2025-12-01 13:38:19] 2025-12-01 18:37:17,666 | INFO     | --------------------------------------------------
[2025-12-01 13:38:19] 2025-12-01 18:37:17,666 | INFO     | PanDA job id: 6900801339
[2025-12-01 13:38:19] 2025-12-01 18:37:17,666 | INFO     | task id: 47530783
[2025-12-01 13:38:19] 2025-12-01 18:37:17,666 | INFO     | errors: (none)
[2025-12-01 13:38:19] 2025-12-01 18:37:17,666 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 13:38:19] 2025-12-01 18:37:17,666 | INFO     | pilot state: finished 
[2025-12-01 13:38:19] 2025-12-01 18:37:17,666 | INFO     | transexitcode: 0
[2025-12-01 13:38:19] 2025-12-01 18:37:17,667 | INFO     | exeerrorcode: 0
[2025-12-01 13:38:19] 2025-12-01 18:37:17,667 | INFO     | exeerrordiag: 
[2025-12-01 13:38:19] 2025-12-01 18:37:17,667 | INFO     | exitcode: 0
[2025-12-01 13:38:19] 2025-12-01 18:37:17,667 | INFO     | exitmsg: OK
[2025-12-01 13:38:19] 2025-12-01 18:37:17,667 | INFO     | cpuconsumptiontime: 253634 s
[2025-12-01 13:38:19] 2025-12-01 18:37:17,667 | INFO     | nevents: 1000
[2025-12-01 13:38:19] 2025-12-01 18:37:17,667 | INFO     | neventsw: 0
[2025-12-01 13:38:19] 2025-12-01 18:37:17,667 | INFO     | pid: 20098
[2025-12-01 13:38:19] 2025-12-01 18:37:17,668 | INFO     | pgrp: 20098
[2025-12-01 13:38:19] 2025-12-01 18:37:17,668 | INFO     | corecount: 12
[2025-12-01 13:38:19] 2025-12-01 18:37:17,668 | INFO     | event service: False
[2025-12-01 13:38:19] 2025-12-01 18:37:17,668 | INFO     | sizes: {0: 2284449, 5: 2284711, 11: 2284767, 22574: 2339701, 22575: 2339700, 22578: 2348934, 22583: 2349124}
[2025-12-01 13:38:19] 2025-12-01 18:37:17,668 | INFO     | --------------------------------------------------
[2025-12-01 13:38:19] 2025-12-01 18:37:17,668 | INFO     | 
[2025-12-01 13:38:19] 2025-12-01 18:37:17,668 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-01 13:38:19] 2025-12-01 18:37:17,674 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6900801339: 12087034 B (within 2537553920 B limit)
[2025-12-01 13:38:19] 2025-12-01 18:37:17,675 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6900801339/HITS.47530783._000718.pool.root.1 does not exist (skip from workdir size calculation)
[2025-12-01 13:38:19] 2025-12-01 18:37:17,675 | INFO     | total size of present files: 0 B (workdir size: 12087034 B)
[2025-12-01 13:38:19] 2025-12-01 18:37:17,675 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6900801339/HITS.47530783._000718.pool.root.1 since it does not exist
[2025-12-01 13:38:19] 2025-12-01 18:37:17,691 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 13:38:19] 2025-12-01 18:37:17,691 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 13:38:19] 2025-12-01 18:37:17,691 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 13:38:19] 2025-12-01 18:37:17,692 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 13:38:19] 2025-12-01 18:37:17,692 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 13:38:19] 2025-12-01 18:37:17,692 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 13:38:19] 2025-12-01 18:37:17,692 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 13:38:19] 2025-12-01 18:37:17,692 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 13:38:19] 2025-12-01 18:37:17,693 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 13:38:19] 2025-12-01 18:37:17,693 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 13:38:19] 2025-12-01 18:37:17,693 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 13:38:19] 2025-12-01 18:37:17,693 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 13:38:19] 2025-12-01 18:37:17,693 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 13:38:19] 2025-12-01 18:37:17,693 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 13:38:19] 2025-12-01 18:37:17,694 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 13:38:19] 2025-12-01 18:37:17,694 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 13:38:19] 2025-12-01 18:37:17,694 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 13:38:19] 2025-12-01 18:37:17,694 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 13:38:19] 2025-12-01 18:37:17,694 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 13:38:19] 2025-12-01 18:37:17,694 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 13:38:19] 2025-12-01 18:37:17,695 | INFO     | job 6900801339 has completed (purged errors)
[2025-12-01 13:38:19] 2025-12-01 18:37:17,695 | INFO     | overall cleanup function is called
[2025-12-01 13:38:19] 2025-12-01 18:37:17,774 | INFO     | number of running child processes to parent process 20098: 1
[2025-12-01 13:38:19] 2025-12-01 18:37:17,774 | INFO     | maximum number of monitored processes: 20
[2025-12-01 13:38:19] 2025-12-01 18:37:17,774 | INFO     | aborting job monitoring since job object (job id=6900801339) has expired
[2025-12-01 13:38:19] 2025-12-01 18:37:18,716 | INFO     | --- collectZombieJob: --- 10, [20098]
[2025-12-01 13:38:19] 2025-12-01 18:37:18,717 | INFO     | zombie collector waiting for pid 20098
[2025-12-01 13:38:19] 2025-12-01 18:37:18,717 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 13:38:19] 2025-12-01 18:37:18,717 | INFO     | collected zombie processes
[2025-12-01 13:38:19] 2025-12-01 18:37:18,717 | INFO     | will attempt to kill all subprocesses of pid=20098
[2025-12-01 13:38:19] 2025-12-01 18:37:18,806 | INFO     | process IDs to be killed: [20098] (in reverse order)
[2025-12-01 13:38:19] 2025-12-01 18:37:18,856 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 13:38:19] 2025-12-01 18:37:18,856 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 13:38:19] 2025-12-01 18:37:18,860 | INFO     | did not find any defunct processes belonging to 20098
[2025-12-01 13:38:19] 2025-12-01 18:37:18,862 | INFO     | did not find any defunct processes belonging to 20098
[2025-12-01 13:38:19] 2025-12-01 18:37:18,864 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 13:38:19] 2025-12-01 18:37:18,864 | INFO     | ready for new job
[2025-12-01 13:38:19] 2025-12-01 18:37:18,865 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 13:38:19] 2025-12-01 18:37:18,866 | INFO     | ***************************************
[2025-12-01 13:38:19] 2025-12-01 18:37:18,866 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 13:38:19] 2025-12-01 18:37:18,866 | INFO     | ***************************************
[2025-12-01 13:38:19] 2025-12-01 18:37:18,867 | INFO     | 
[2025-12-01 13:38:19] 2025-12-01 18:37:18,867 | INFO     | architecture information:
[2025-12-01 13:38:19] 2025-12-01 18:37:18,868 | INFO     | executing command: cat /etc/os-release
[2025-12-01 13:38:19] 2025-12-01 18:37:18,883 | INFO     | cat /etc/os-release:
[2025-12-01 13:38:19] NAME="CentOS Linux"
[2025-12-01 13:38:19] VERSION="7 (Core)"
[2025-12-01 13:38:19] ID="centos"
[2025-12-01 13:38:19] ID_LIKE="rhel fedora"
[2025-12-01 13:38:19] VERSION_ID="7"
[2025-12-01 13:38:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 13:38:19] ANSI_COLOR="0;31"
[2025-12-01 13:38:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 13:38:19] HOME_URL="https://www.centos.org/"
[2025-12-01 13:38:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 13:38:19] 
[2025-12-01 13:38:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 13:38:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 13:38:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 13:38:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 13:38:19] 
[2025-12-01 13:38:19] 2025-12-01 18:37:18,884 | INFO     | ***************************************
[2025-12-01 13:38:19] 2025-12-01 18:37:19,387 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-01 13:38:19] 2025-12-01 18:37:19,402 | INFO     | sufficient remaining disk space (28529655808 B)
[2025-12-01 13:38:19] 2025-12-01 18:37:19,402 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 13:38:19] 2025-12-01 18:37:19,403 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 13:38:19] 2025-12-01 18:37:19,403 | INFO     | update_server=False
[2025-12-01 13:38:19] 2025-12-01 18:37:19,403 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 13:38:19] 2025-12-01 18:37:19,403 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-01 13:38:19] 2025-12-01 18:37:19,403 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 13:38:19] 2025-12-01 18:37:19,404 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 13:38:19] 2025-12-01 18:37:19,404 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 13:38:19] 2025-12-01 18:37:19,404 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 13:38:19] 2025-12-01 18:37:19,404 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 13:38:19] 2025-12-01 18:37:19,405 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 13:38:19] 2025-12-01 18:37:19,405 | INFO     | aborting loop
[2025-12-01 13:38:19] 2025-12-01 18:37:19,447 | INFO     | all payload control threads have been joined
[2025-12-01 13:38:19] 2025-12-01 18:37:20,077 | INFO     | all job control threads have been joined
[2025-12-01 13:38:19] 2025-12-01 18:37:20,280 | INFO     | all data control threads have been joined
[2025-12-01 13:38:19] 2025-12-01 18:37:20,408 | INFO     | [job] retrieve thread has finished
[2025-12-01 13:38:19] 2025-12-01 18:37:20,410 | INFO     | [job] queue monitor thread has finished
[2025-12-01 13:38:19] 2025-12-01 18:37:20,411 | INFO     | [job] job monitor thread has finished
[2025-12-01 13:38:19] 2025-12-01 18:37:20,453 | INFO     | [payload] control thread has finished
[2025-12-01 13:38:19] 2025-12-01 18:37:20,663 | INFO     | [payload] failed_post thread has finished
[2025-12-01 13:38:19] 2025-12-01 18:37:20,693 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 13:38:19] 2025-12-01 18:37:20,758 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 13:38:19] 2025-12-01 18:37:20,789 | INFO     | [job] validate thread has finished
[2025-12-01 13:38:19] 2025-12-01 18:37:21,082 | INFO     | [job] control thread has finished
[2025-12-01 13:38:19] 2025-12-01 18:37:21,285 | INFO     | [data] control thread has finished
[2025-12-01 13:38:19] 2025-12-01 18:37:21,506 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 13:38:19] 2025-12-01 18:37:21,507 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 13:38:19] 2025-12-01 18:37:21,632 | INFO     | [data] copytool_in thread has finished
[2025-12-01 13:38:19] 2025-12-01 18:37:21,691 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 13:38:19] 2025-12-01 18:37:21,790 | INFO     | [payload] validate_post thread has finished
[2025-12-01 13:38:19] 2025-12-01 18:37:22,764 | INFO     | [data] copytool_out thread has finished
[2025-12-01 13:38:19] 2025-12-01 18:37:23,410 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 13:38:19] 2025-12-01 18:38:14,314 | INFO     | [monitor] cgroup control has ended
[2025-12-01 13:38:19] 2025-12-01 18:38:14,463 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139726909835072)>', '<ExcThread(monitor, started 139726459746048)>']
[2025-12-01 13:38:19] 2025-12-01 18:38:14,625 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 13:38:19] 2025-12-01 18:38:14,625 | INFO     | [monitor] control thread has ended
[2025-12-01 13:38:19] 2025-12-01 18:38:19,488 | INFO     | all workflow threads have been joined
[2025-12-01 13:38:19] 2025-12-01 18:38:19,489 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 13:38:19] 2025-12-01 18:38:19,489 | INFO     | traces error code: 0
[2025-12-01 13:38:19] 2025-12-01 18:38:19,489 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 13:38:19] 2025-12-01 18:38:19,571 [wrapper] ==== pilot stdout END ====
[2025-12-01 13:38:19] 2025-12-01 18:38:19,575 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 13:38:19] 2025-12-01 18:38:19,579 [wrapper] pilotpid: 13016
[2025-12-01 13:38:19] 2025-12-01 18:38:19,582 [wrapper] Pilot exit status: 0
[2025-12-01 13:38:19] 2025-12-01 18:38:19,596 [wrapper] pandaids: 6900801339
[2025-12-01 13:38:19] 2025-12-01 18:38:19,641 [wrapper] cleanup supervisor_pilot 14979 13017
[2025-12-01 13:38:19] 2025-12-01 18:38:19,645 [wrapper] Test setup, not cleaning
[2025-12-01 13:38:19] 2025-12-01 18:38:19,649 [wrapper] apfmon messages muted
[2025-12-01 13:38:19] 2025-12-01 18:38:19,653 [wrapper] ==== wrapper stdout END ====
[2025-12-01 13:38:19] 2025-12-01 18:38:19,656 [wrapper] ==== wrapper stderr END ====
[2025-12-01 13:38:19]  *** Error codes and diagnostics ***
[2025-12-01 13:38:19]     "exeErrorCode": 0,
[2025-12-01 13:38:19]     "exeErrorDiag": "",
[2025-12-01 13:38:19]     "pilotErrorCode": 0,
[2025-12-01 13:38:19]     "pilotErrorDiag": "",
[2025-12-01 13:38:19]  *** Listing of results directory ***
[2025-12-01 13:38:19] total 1064524
[2025-12-01 13:38:19] -rw-r--r-- 1 boincer umatlas    576529 Nov 29 04:19 pilot3.tar.gz
[2025-12-01 13:38:19] -rwx------ 1 boincer umatlas     36292 Nov 29 04:22 runpilot2-wrapper.sh
[2025-12-01 13:38:19] -rw-r--r-- 1 boincer umatlas      5112 Nov 29 04:26 queuedata.json
[2025-12-01 13:38:19] -rw-r--r-- 1 boincer umatlas       100 Dec  1 07:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 13:38:19] -rwxr-xr-x 1 boincer umatlas      7986 Dec  1 07:20 run_atlas
[2025-12-01 13:38:19] -rw-r--r-- 1 boincer umatlas       105 Dec  1 07:20 job.xml
[2025-12-01 13:38:19] -rw-r--r-- 2 boincer umatlas 378557248 Dec  1 07:20 EVNT.47530775._000072.pool.root.1
[2025-12-01 13:38:19] -rw-r--r-- 2 boincer umatlas     15847 Dec  1 07:20 start_atlas.sh
[2025-12-01 13:38:19] drwxrwx--x 2 boincer umatlas      4096 Dec  1 07:20 shared
[2025-12-01 13:38:19] -rw-r--r-- 2 boincer umatlas    590127 Dec  1 07:20 input.tar.gz
[2025-12-01 13:38:19] -rw-r--r-- 1 boincer umatlas         0 Dec  1 07:20 boinc_lockfile
[2025-12-01 13:38:19] -rw-r--r-- 1 boincer umatlas      2878 Dec  1 07:20 pandaJob.out
[2025-12-01 13:38:19] -rw------- 1 boincer umatlas        57 Dec  1 07:20 setup.sh.local
[2025-12-01 13:38:19] -rw------- 1 boincer umatlas    992117 Dec  1 07:20 agis_schedconf.cvmfs.json
[2025-12-01 13:38:19] drwx------ 5 boincer umatlas      4096 Dec  1 07:20 pilot3
[2025-12-01 13:38:19] -rw-r--r-- 1 boincer umatlas       533 Dec  1 13:27 boinc_task_state.xml
[2025-12-01 13:38:19] -rw-r--r-- 1 boincer umatlas      5955 Dec  1 13:36 init_data.xml
[2025-12-01 13:38:19] -rw------- 1 boincer umatlas 696734215 Dec  1 13:36 HITS.47530783._000718.pool.root.1
[2025-12-01 13:38:19] -rw------- 1 boincer umatlas        95 Dec  1 13:36 pilot_heartbeat.json
[2025-12-01 13:38:19] -rw------- 1 boincer umatlas      1062 Dec  1 13:37 memory_monitor_summary.json
[2025-12-01 13:38:19] -rw------- 1 boincer umatlas   1516240 Dec  1 13:37 agis_ddmendpoints.agis.ALL.json
[2025-12-01 13:38:19] -rw------- 1 boincer umatlas   2242033 Dec  1 13:37 log.47530783._000718.job.log.tgz.1
[2025-12-01 13:38:19] -rw------- 1 boincer umatlas     28110 Dec  1 13:37 heartbeat.json
[2025-12-01 13:38:19] -rw-r--r-- 1 boincer umatlas      8192 Dec  1 13:38 boinc_mmap_file
[2025-12-01 13:38:19] -rw-r--r-- 1 boincer umatlas        29 Dec  1 13:38 wrapper_checkpoint.txt
[2025-12-01 13:38:19] -rw------- 1 boincer umatlas      4552 Dec  1 13:38 pilotlog.txt
[2025-12-01 13:38:19] -rw------- 1 boincer umatlas   3171462 Dec  1 13:38 log.47530783._000718.job.log.1
[2025-12-01 13:38:19] -rw------- 1 boincer umatlas       353 Dec  1 13:38 output.list
[2025-12-01 13:38:19] -rw-r--r-- 1 boincer umatlas       620 Dec  1 13:38 runtime_log
[2025-12-01 13:38:19] -rw------- 1 boincer umatlas   5447680 Dec  1 13:38 result.tar.gz
[2025-12-01 13:38:19] -rw-r--r-- 1 boincer umatlas      9345 Dec  1 13:38 runtime_log.err
[2025-12-01 13:38:19] -rw------- 1 boincer umatlas       670 Dec  1 13:38 3OTMDm3KWj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmiqLKDm898Q3m.diag
[2025-12-01 13:38:19] -rw-r--r-- 1 boincer umatlas     21467 Dec  1 13:38 stderr.txt
[2025-12-01 13:38:19] HITS file was successfully produced:
[2025-12-01 13:38:19] -rw------- 1 boincer umatlas 696734215 Dec  1 13:36 shared/HITS.pool.root.1
[2025-12-01 13:38:19]  *** Contents of shared directory: ***
[2025-12-01 13:38:19] total 1056016
[2025-12-01 13:38:19] -rw-r--r-- 2 boincer umatlas 378557248 Dec  1 07:20 ATLAS.root_0
[2025-12-01 13:38:19] -rw-r--r-- 2 boincer umatlas     15847 Dec  1 07:20 start_atlas.sh
[2025-12-01 13:38:19] -rw-r--r-- 2 boincer umatlas    590127 Dec  1 07:20 input.tar.gz
[2025-12-01 13:38:19] -rw------- 1 boincer umatlas 696734215 Dec  1 13:36 HITS.pool.root.1
[2025-12-01 13:38:19] -rw------- 1 boincer umatlas   5447680 Dec  1 13:38 result.tar.gz
13:38:21 (9338): run_atlas exited; CPU time 246823.744411
13:38:21 (9338): called boinc_finish(0)

</stderr_txt>
]]>

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