Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:14:58 (6452): wrapper (7.7.26015): starting
05:14:58 (6452): wrapper: running run_atlas (--nthreads 8)
[2025-12-01 05:14:58] Arguments: --nthreads 8
[2025-12-01 05:14:58] Threads: 8
[2025-12-01 05:14:58] Checking for CVMFS
[2025-12-01 05:14:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 05:14:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 05:14:58] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 05:14:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 05:14:58] 2.11.2.0 17210 124733 143976 153512 2 81 11793589 18432001 1858 130560 0 92859008 99.976 5263157 29617 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-01 05:14:58] CVMFS is ok
[2025-12-01 05:14:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 05:14:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 05:14:58] Further information can be found at the LHC@home message board.
[2025-12-01 05:14:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 05:14:58] Checking for apptainer binary...
[2025-12-01 05:14:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 05:14:58] Running /usr/bin/apptainer --version
[2025-12-01 05:14:58] apptainer version 1.3.2-1.el7
[2025-12-01 05:14:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 05:14:59] c-206-14.aglt2.org
[2025-12-01 05:14:59] apptainer works
[2025-12-01 05:14:59] Set ATHENA_PROC_NUMBER=8
[2025-12-01 05:14:59] Set ATHENA_CORE_NUMBER=8
[2025-12-01 05:14:59] Starting ATLAS job with PandaID=6908987483
[2025-12-01 05:14:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 09:31:41]  *** The last 200 lines of the pilot log: ***
[2025-12-01 09:31:41] 2025-12-01 14:30:41,438 | INFO     | total number of processed events: 400 (read)
[2025-12-01 09:31:41] 2025-12-01 14:30:41,439 | INFO     | executing command: lscpu
[2025-12-01 09:31:41] 2025-12-01 14:30:41,467 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-01 09:31:41] 2025-12-01 14:30:41,626 | INFO     | time since job start (15331s) is within the limit (172800.0s)
[2025-12-01 09:31:41] 2025-12-01 14:30:43,633 | INFO     | time since job start (15333s) is within the limit (172800.0s)
[2025-12-01 09:31:41] 2025-12-01 14:30:43,774 | INFO     | monitor loop #1098: job 0:6908987483 is in state 'finished'
[2025-12-01 09:31:41] 2025-12-01 14:30:43,774 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-01 09:31:41] 2025-12-01 14:30:44,800 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-01 09:31:41] 2025-12-01 14:30:44,804 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2405.7916666666665
[2025-12-01 09:31:41] 2025-12-01 14:30:44,807 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6908987483/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 09:31:41] 2025-12-01 14:30:44,807 | INFO     | extracted standard info from prmon json
[2025-12-01 09:31:41] 2025-12-01 14:30:44,807 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 09:31:41] 2025-12-01 14:30:44,807 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 09:31:41] 2025-12-01 14:30:44,808 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-01 09:31:41] 2025-12-01 14:30:44,808 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-01 09:31:41] 2025-12-01 14:30:44,811 | INFO     | fitting pss+swap vs Time
[2025-12-01 09:31:41] 2025-12-01 14:30:44,812 | INFO     | sum of square deviations: 4903347750.0
[2025-12-01 09:31:41] 2025-12-01 14:30:44,822 | INFO     | sum of deviations: 33929552857.999977
[2025-12-01 09:31:41] 2025-12-01 14:30:44,822 | INFO     | mean x: 1764591761.0
[2025-12-01 09:31:41] 2025-12-01 14:30:44,822 | INFO     | mean y: 2517191.565737052
[2025-12-01 09:31:41] 2025-12-01 14:30:44,823 | INFO     | intersect: -12207877110.498758
[2025-12-01 09:31:41] 2025-12-01 14:30:44,823 | INFO     | chi2: 1.429583608587317
[2025-12-01 09:31:41] 2025-12-01 14:30:44,823 | INFO     | sum of square deviations: 4616114457.5
[2025-12-01 09:31:41] 2025-12-01 14:30:44,825 | INFO     | sum of deviations: 32948437276.000004
[2025-12-01 09:31:41] 2025-12-01 14:30:44,825 | INFO     | mean x: 1764591608.5
[2025-12-01 09:31:41] 2025-12-01 14:30:44,825 | INFO     | mean y: 2516670.5447154474
[2025-12-01 09:31:41] 2025-12-01 14:30:44,825 | INFO     | intersect: -12592607749.724972
[2025-12-01 09:31:41] 2025-12-01 14:30:44,825 | INFO     | chi2: 1.4301962997913222
[2025-12-01 09:31:41] 2025-12-01 14:30:44,825 | INFO     | current chi2=1.4301962997913222 (change=-0.04285801825964192 %)
[2025-12-01 09:31:41] 2025-12-01 14:30:44,826 | INFO     | right removable region: 245
[2025-12-01 09:31:41] 2025-12-01 14:30:44,826 | INFO     | sum of square deviations: 4616114457.5
[2025-12-01 09:31:41] 2025-12-01 14:30:44,827 | INFO     | sum of deviations: -2589363166.5
[2025-12-01 09:31:41] 2025-12-01 14:30:44,827 | INFO     | mean x: 1764591913.5
[2025-12-01 09:31:41] 2025-12-01 14:30:44,828 | INFO     | mean y: 2536397.1097560977
[2025-12-01 09:31:41] 2025-12-01 14:30:44,828 | INFO     | intersect: 992366555.5229489
[2025-12-01 09:31:41] 2025-12-01 14:30:44,828 | INFO     | chi2: 0.08725343640140547
[2025-12-01 09:31:41] 2025-12-01 14:30:44,828 | INFO     | current chi2=0.08725343640140547 (change=93.89658388097864 %)
[2025-12-01 09:31:41] 2025-12-01 14:30:44,828 | INFO     | sum of square deviations: 4340323240.0
[2025-12-01 09:31:41] 2025-12-01 14:30:44,830 | INFO     | sum of deviations: -4515845738.000002
[2025-12-01 09:31:41] 2025-12-01 14:30:44,830 | INFO     | mean x: 1764592066.0
[2025-12-01 09:31:41] 2025-12-01 14:30:44,830 | INFO     | mean y: 2537441.867219917
[2025-12-01 09:31:41] 2025-12-01 14:30:44,830 | INFO     | intersect: 1838489540.3461154
[2025-12-01 09:31:41] 2025-12-01 14:30:44,830 | INFO     | chi2: 0.07333763217613379
[2025-12-01 09:31:41] 2025-12-01 14:30:44,830 | INFO     | current chi2=0.07333763217613379 (change=15.94871766568901 %)
[2025-12-01 09:31:41] 2025-12-01 14:30:44,831 | INFO     | left removable region: 20
[2025-12-01 09:31:41] 2025-12-01 14:30:44,831 | INFO     | sum of square deviations: 3531973200.0
[2025-12-01 09:31:41] 2025-12-01 14:30:44,832 | INFO     | sum of deviations: 8146836822.0
[2025-12-01 09:31:41] 2025-12-01 14:30:44,832 | INFO     | mean x: 1764592188.0
[2025-12-01 09:31:41] 2025-12-01 14:30:44,832 | INFO     | mean y: 2529368.328888889
[2025-12-01 09:31:41] 2025-12-01 14:30:44,832 | INFO     | intersect: -4067672696.911002
[2025-12-01 09:31:41] 2025-12-01 14:30:44,833 | INFO     | chi2: 0.0007407563901519874
[2025-12-01 09:31:41] 2025-12-01 14:30:44,833 | INFO     | current memory leak: 2.31 B/s (using 225 data points, chi2=0.00)
[2025-12-01 09:31:41] 2025-12-01 14:30:44,833 | INFO     | could have reported an average CPU frequency of 2595 MHz (12 samples)
[2025-12-01 09:31:41] 2025-12-01 14:30:44,833 | INFO     | ..............................
[2025-12-01 09:31:41] 2025-12-01 14:30:44,834 | INFO     | . Timing measurements:
[2025-12-01 09:31:41] 2025-12-01 14:30:44,834 | INFO     | . get job = 0 s
[2025-12-01 09:31:41] 2025-12-01 14:30:44,834 | INFO     | . initial setup = 2 s
[2025-12-01 09:31:41] 2025-12-01 14:30:44,834 | INFO     | . payload setup = 5 s
[2025-12-01 09:31:41] 2025-12-01 14:30:44,834 | INFO     | . stage-in = 0 s
[2025-12-01 09:31:41] 2025-12-01 14:30:44,834 | INFO     | . payload execution = 15300 s
[2025-12-01 09:31:41] 2025-12-01 14:30:44,834 | INFO     | . stage-out = 2 s
[2025-12-01 09:31:41] 2025-12-01 14:30:44,834 | INFO     | . log creation = 0 s
[2025-12-01 09:31:41] 2025-12-01 14:30:44,834 | INFO     | ..............................
[2025-12-01 09:31:41] 2025-12-01 14:30:44,953 | INFO     | 
[2025-12-01 09:31:41] 2025-12-01 14:30:44,953 | INFO     | job summary report
[2025-12-01 09:31:41] 2025-12-01 14:30:44,953 | INFO     | --------------------------------------------------
[2025-12-01 09:31:41] 2025-12-01 14:30:44,953 | INFO     | PanDA job id: 6908987483
[2025-12-01 09:31:41] 2025-12-01 14:30:44,954 | INFO     | task id: 46965017
[2025-12-01 09:31:41] 2025-12-01 14:30:44,954 | INFO     | errors: (none)
[2025-12-01 09:31:41] 2025-12-01 14:30:44,954 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 09:31:41] 2025-12-01 14:30:44,954 | INFO     | pilot state: finished 
[2025-12-01 09:31:41] 2025-12-01 14:30:44,954 | INFO     | transexitcode: 0
[2025-12-01 09:31:41] 2025-12-01 14:30:44,954 | INFO     | exeerrorcode: 0
[2025-12-01 09:31:41] 2025-12-01 14:30:44,954 | INFO     | exeerrordiag: 
[2025-12-01 09:31:41] 2025-12-01 14:30:44,955 | INFO     | exitcode: 0
[2025-12-01 09:31:41] 2025-12-01 14:30:44,955 | INFO     | exitmsg: OK
[2025-12-01 09:31:41] 2025-12-01 14:30:44,955 | INFO     | cpuconsumptiontime: 115607 s
[2025-12-01 09:31:41] 2025-12-01 14:30:44,955 | INFO     | nevents: 400
[2025-12-01 09:31:41] 2025-12-01 14:30:44,955 | INFO     | neventsw: 0
[2025-12-01 09:31:41] 2025-12-01 14:30:44,955 | INFO     | pid: 17942
[2025-12-01 09:31:41] 2025-12-01 14:30:44,956 | INFO     | pgrp: 17942
[2025-12-01 09:31:41] 2025-12-01 14:30:44,956 | INFO     | corecount: 8
[2025-12-01 09:31:41] 2025-12-01 14:30:44,956 | INFO     | event service: False
[2025-12-01 09:31:41] 2025-12-01 14:30:44,956 | INFO     | sizes: {0: 2283866, 1: 2284008, 4: 2284270, 11: 2284298, 15310: 2315296, 15312: 2324294, 15315: 2324506, 15319: 2324700}
[2025-12-01 09:31:41] 2025-12-01 14:30:44,956 | INFO     | --------------------------------------------------
[2025-12-01 09:31:41] 2025-12-01 14:30:44,956 | INFO     | 
[2025-12-01 09:31:41] 2025-12-01 14:30:44,957 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-01 09:31:41] 2025-12-01 14:30:44,976 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 09:31:41] 2025-12-01 14:30:44,977 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 09:31:41] 2025-12-01 14:30:44,977 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 09:31:41] 2025-12-01 14:30:44,977 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 09:31:41] 2025-12-01 14:30:44,977 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 09:31:41] 2025-12-01 14:30:44,978 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 09:31:41] 2025-12-01 14:30:44,978 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 09:31:41] 2025-12-01 14:30:44,978 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 09:31:41] 2025-12-01 14:30:44,978 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 09:31:41] 2025-12-01 14:30:44,978 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 09:31:41] 2025-12-01 14:30:44,978 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 09:31:41] 2025-12-01 14:30:44,979 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 09:31:41] 2025-12-01 14:30:44,979 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 09:31:41] 2025-12-01 14:30:44,979 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 09:31:41] 2025-12-01 14:30:44,979 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 09:31:41] 2025-12-01 14:30:44,979 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 09:31:41] 2025-12-01 14:30:44,980 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 09:31:41] 2025-12-01 14:30:44,980 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 09:31:41] 2025-12-01 14:30:44,980 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 09:31:41] 2025-12-01 14:30:44,980 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 09:31:41] 2025-12-01 14:30:44,980 | INFO     | job 6908987483 has completed (purged errors)
[2025-12-01 09:31:41] 2025-12-01 14:30:44,981 | INFO     | overall cleanup function is called
[2025-12-01 09:31:41] 2025-12-01 14:30:45,988 | INFO     | --- collectZombieJob: --- 10, [17942]
[2025-12-01 09:31:41] 2025-12-01 14:30:45,989 | INFO     | zombie collector waiting for pid 17942
[2025-12-01 09:31:41] 2025-12-01 14:30:45,989 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 09:31:41] 2025-12-01 14:30:45,989 | INFO     | collected zombie processes
[2025-12-01 09:31:41] 2025-12-01 14:30:45,989 | INFO     | will attempt to kill all subprocesses of pid=17942
[2025-12-01 09:31:41] 2025-12-01 14:30:46,119 | INFO     | process IDs to be killed: [17942] (in reverse order)
[2025-12-01 09:31:41] 2025-12-01 14:30:46,177 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 09:31:41] 2025-12-01 14:30:46,177 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 09:31:41] 2025-12-01 14:30:46,183 | INFO     | did not find any defunct processes belonging to 17942
[2025-12-01 09:31:41] 2025-12-01 14:30:46,187 | INFO     | did not find any defunct processes belonging to 17942
[2025-12-01 09:31:41] 2025-12-01 14:30:46,189 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 09:31:41] 2025-12-01 14:30:46,189 | INFO     | ready for new job
[2025-12-01 09:31:41] 2025-12-01 14:30:46,190 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 09:31:41] 2025-12-01 14:30:46,192 | INFO     | ***************************************
[2025-12-01 09:31:41] 2025-12-01 14:30:46,192 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 09:31:41] 2025-12-01 14:30:46,192 | INFO     | ***************************************
[2025-12-01 09:31:41] 2025-12-01 14:30:46,192 | INFO     | 
[2025-12-01 09:31:41] 2025-12-01 14:30:46,194 | INFO     | architecture information:
[2025-12-01 09:31:41] 2025-12-01 14:30:46,194 | INFO     | executing command: cat /etc/os-release
[2025-12-01 09:31:41] 2025-12-01 14:30:46,207 | INFO     | cat /etc/os-release:
[2025-12-01 09:31:41] NAME="CentOS Linux"
[2025-12-01 09:31:41] VERSION="7 (Core)"
[2025-12-01 09:31:41] ID="centos"
[2025-12-01 09:31:41] ID_LIKE="rhel fedora"
[2025-12-01 09:31:41] VERSION_ID="7"
[2025-12-01 09:31:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 09:31:41] ANSI_COLOR="0;31"
[2025-12-01 09:31:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 09:31:41] HOME_URL="https://www.centos.org/"
[2025-12-01 09:31:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 09:31:41] 
[2025-12-01 09:31:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 09:31:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 09:31:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 09:31:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 09:31:41] 
[2025-12-01 09:31:41] 2025-12-01 14:30:46,207 | INFO     | ***************************************
[2025-12-01 09:31:41] 2025-12-01 14:30:46,712 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-01 09:31:41] 2025-12-01 14:30:46,730 | INFO     | sufficient remaining disk space (26285703168 B)
[2025-12-01 09:31:41] 2025-12-01 14:30:46,731 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 09:31:41] 2025-12-01 14:30:46,731 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 09:31:41] 2025-12-01 14:30:46,731 | INFO     | update_server=False
[2025-12-01 09:31:41] 2025-12-01 14:30:46,731 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 09:31:41] 2025-12-01 14:30:46,731 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 09:31:41] 2025-12-01 14:30:46,731 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 09:31:41] 2025-12-01 14:30:46,732 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 09:31:41] 2025-12-01 14:30:47,091 | INFO     | all data control threads have been joined
[2025-12-01 09:31:41] 2025-12-01 14:30:47,283 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 09:31:41] 2025-12-01 14:30:47,284 | INFO     | aborting loop
[2025-12-01 09:31:41] 2025-12-01 14:30:47,320 | INFO     | all job control threads have been joined
[2025-12-01 09:31:41] 2025-12-01 14:30:47,736 | INFO     | [job] retrieve thread has finished
[2025-12-01 09:31:41] 2025-12-01 14:30:47,737 | INFO     | [job] queue monitor thread has finished
[2025-12-01 09:31:41] 2025-12-01 14:30:47,823 | INFO     | [payload] validate_post thread has finished
[2025-12-01 09:31:41] 2025-12-01 14:30:48,086 | INFO     | all payload control threads have been joined
[2025-12-01 09:31:41] 2025-12-01 14:30:48,093 | INFO     | [data] control thread has finished
[2025-12-01 09:31:41] 2025-12-01 14:30:48,187 | INFO     | [payload] failed_post thread has finished
[2025-12-01 09:31:41] 2025-12-01 14:30:48,289 | INFO     | [job] job monitor thread has finished
[2025-12-01 09:31:41] 2025-12-01 14:30:48,326 | INFO     | [job] control thread has finished
[2025-12-01 09:31:41] 2025-12-01 14:30:48,551 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 09:31:41] 2025-12-01 14:30:48,551 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 09:31:41] 2025-12-01 14:30:48,558 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 09:31:41] 2025-12-01 14:30:48,572 | INFO     | [job] validate thread has finished
[2025-12-01 09:31:41] 2025-12-01 14:30:48,737 | INFO     | [data] copytool_out thread has finished
[2025-12-01 09:31:41] 2025-12-01 14:30:49,092 | INFO     | [payload] control thread has finished
[2025-12-01 09:31:41] 2025-12-01 14:30:49,203 | INFO     | [data] copytool_in thread has finished
[2025-12-01 09:31:41] 2025-12-01 14:30:50,738 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 09:31:41] 2025-12-01 14:30:57,190 | INFO     | job.realtimelogging is not enabled
[2025-12-01 09:31:41] 2025-12-01 14:30:58,195 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 09:31:41] 2025-12-01 14:31:16,861 | INFO     | PID=10700 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-01 09:31:41] 2025-12-01 14:31:16,867 | INFO     | .. there are 3 such processes running
[2025-12-01 09:31:41] 2025-12-01 14:31:16,868 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 09:31:41] 2025-12-01 14:31:16,868 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 09:31:41] 2025-12-01 14:31:16,868 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 09:31:41] 2025-12-01 14:31:35,765 | INFO     | [monitor] cgroup control has ended
[2025-12-01 09:31:41] 2025-12-01 14:31:36,057 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140522137233216)>', '<ExcThread(monitor, started 140521699784448)>']
[2025-12-01 09:31:41] 2025-12-01 14:31:36,959 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 09:31:41] 2025-12-01 14:31:36,959 | INFO     | [monitor] control thread has ended
[2025-12-01 09:31:41] 2025-12-01 14:31:41,081 | INFO     | all workflow threads have been joined
[2025-12-01 09:31:41] 2025-12-01 14:31:41,082 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 09:31:41] 2025-12-01 14:31:41,082 | INFO     | traces error code: 0
[2025-12-01 09:31:41] 2025-12-01 14:31:41,082 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 09:31:41] 2025-12-01 14:31:41,170 [wrapper] ==== pilot stdout END ====
[2025-12-01 09:31:41] 2025-12-01 14:31:41,172 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 09:31:41] 2025-12-01 14:31:41,175 [wrapper] pilotpid: 10700
[2025-12-01 09:31:41] 2025-12-01 14:31:41,177 [wrapper] Pilot exit status: 0
[2025-12-01 09:31:41] 2025-12-01 14:31:41,185 [wrapper] pandaids: 6908987483
[2025-12-01 09:31:41] 2025-12-01 14:31:41,212 [wrapper] cleanup supervisor_pilot 29219 10701
[2025-12-01 09:31:41] 2025-12-01 14:31:41,214 [wrapper] Test setup, not cleaning
[2025-12-01 09:31:41] 2025-12-01 14:31:41,216 [wrapper] apfmon messages muted
[2025-12-01 09:31:41] 2025-12-01 14:31:41,218 [wrapper] ==== wrapper stdout END ====
[2025-12-01 09:31:41] 2025-12-01 14:31:41,220 [wrapper] ==== wrapper stderr END ====
[2025-12-01 09:31:41]  *** Error codes and diagnostics ***
[2025-12-01 09:31:41]     "exeErrorCode": 0,
[2025-12-01 09:31:41]     "exeErrorDiag": "",
[2025-12-01 09:31:41]     "pilotErrorCode": 0,
[2025-12-01 09:31:41]     "pilotErrorDiag": "",
[2025-12-01 09:31:41]  *** Listing of results directory ***
[2025-12-01 09:31:41] total 469660
[2025-12-01 09:31:41] -rw-r--r-- 1 boincer umatlas    598293 Nov  6 03:41 pilot3.tar.gz
[2025-12-01 09:31:41] -rwx------ 1 boincer umatlas     36292 Nov 30 06:08 runpilot2-wrapper.sh
[2025-12-01 09:31:41] -rw-r--r-- 1 boincer umatlas      5112 Nov 30 06:08 queuedata.json
[2025-12-01 09:31:41] -rw-r--r-- 1 boincer umatlas       100 Dec  1 05:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 09:31:41] -rwxr-xr-x 1 boincer umatlas      7986 Dec  1 05:14 run_atlas
[2025-12-01 09:31:41] -rw-r--r-- 1 boincer umatlas       105 Dec  1 05:14 job.xml
[2025-12-01 09:31:41] -rw-r--r-- 2 boincer umatlas 275103211 Dec  1 05:14 EVNT.46965009._000063.pool.root.1
[2025-12-01 09:31:41] -rw-r--r-- 2 boincer umatlas     15847 Dec  1 05:14 start_atlas.sh
[2025-12-01 09:31:41] drwxrwx--x 2 boincer umatlas      4096 Dec  1 05:14 shared
[2025-12-01 09:31:41] -rw-r--r-- 2 boincer umatlas    611148 Dec  1 05:14 input.tar.gz
[2025-12-01 09:31:41] -rw-r--r-- 1 boincer umatlas         0 Dec  1 05:14 boinc_lockfile
[2025-12-01 09:31:41] -rw-r--r-- 1 boincer umatlas      2652 Dec  1 05:14 pandaJob.out
[2025-12-01 09:31:41] -rw------- 1 boincer umatlas        57 Dec  1 05:15 setup.sh.local
[2025-12-01 09:31:41] -rw------- 1 boincer umatlas    992532 Dec  1 05:15 agis_schedconf.cvmfs.json
[2025-12-01 09:31:41] drwx------ 7 boincer umatlas      4096 Dec  1 05:15 pilot3
[2025-12-01 09:31:41] -rw------- 1 boincer umatlas 196669256 Dec  1 09:30 HITS.46965017._001626.pool.root.1
[2025-12-01 09:31:41] -rw-r--r-- 1 boincer umatlas       531 Dec  1 09:30 boinc_task_state.xml
[2025-12-01 09:31:41] -rw------- 1 boincer umatlas      1052 Dec  1 09:30 memory_monitor_summary.json
[2025-12-01 09:31:41] -rw-r--r-- 1 boincer umatlas      5954 Dec  1 09:30 init_data.xml
[2025-12-01 09:31:41] -rw------- 1 boincer umatlas   1516240 Dec  1 09:30 agis_ddmendpoints.agis.ALL.json
[2025-12-01 09:31:41] -rw------- 1 boincer umatlas    469314 Dec  1 09:30 log.46965017._001626.job.log.tgz.1
[2025-12-01 09:31:41] -rw------- 1 boincer umatlas      7854 Dec  1 09:30 heartbeat.json
[2025-12-01 09:31:41] -rw-r--r-- 1 boincer umatlas      8192 Dec  1 09:31 boinc_mmap_file
[2025-12-01 09:31:41] -rw-r--r-- 1 boincer umatlas        29 Dec  1 09:31 wrapper_checkpoint.txt
[2025-12-01 09:31:41] -rw------- 1 boincer umatlas        95 Dec  1 09:31 pilot_heartbeat.json
[2025-12-01 09:31:41] -rw------- 1 boincer umatlas      4893 Dec  1 09:31 pilotlog.txt
[2025-12-01 09:31:41] -rw------- 1 boincer umatlas   2132497 Dec  1 09:31 log.46965017._001626.job.log.1
[2025-12-01 09:31:41] -rw------- 1 boincer umatlas       357 Dec  1 09:31 output.list
[2025-12-01 09:31:41] -rw-r--r-- 1 boincer umatlas       620 Dec  1 09:31 runtime_log
[2025-12-01 09:31:41] -rw------- 1 boincer umatlas   2621440 Dec  1 09:31 result.tar.gz
[2025-12-01 09:31:41] -rw-r--r-- 1 boincer umatlas      9343 Dec  1 09:31 runtime_log.err
[2025-12-01 09:31:41] -rw------- 1 boincer umatlas       664 Dec  1 09:31 CDrKDmJTuj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpNMKDmunTlTo.diag
[2025-12-01 09:31:41] -rw-r--r-- 1 boincer umatlas     21416 Dec  1 09:31 stderr.txt
[2025-12-01 09:31:41] HITS file was successfully produced:
[2025-12-01 09:31:41] -rw------- 1 boincer umatlas 196669256 Dec  1 09:30 shared/HITS.pool.root.1
[2025-12-01 09:31:41]  *** Contents of shared directory: ***
[2025-12-01 09:31:41] total 463896
[2025-12-01 09:31:41] -rw-r--r-- 2 boincer umatlas 275103211 Dec  1 05:14 ATLAS.root_0
[2025-12-01 09:31:41] -rw-r--r-- 2 boincer umatlas     15847 Dec  1 05:14 start_atlas.sh
[2025-12-01 09:31:41] -rw-r--r-- 2 boincer umatlas    611148 Dec  1 05:14 input.tar.gz
[2025-12-01 09:31:41] -rw------- 1 boincer umatlas 196669256 Dec  1 09:30 HITS.pool.root.1
[2025-12-01 09:31:41] -rw------- 1 boincer umatlas   2621440 Dec  1 09:31 result.tar.gz
09:31:42 (6452): run_atlas exited; CPU time 115805.053514
09:31:42 (6452): called boinc_finish(0)

</stderr_txt>
]]>

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