Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:24:59 (3534220): wrapper (7.7.26015): starting
02:24:59 (3534220): wrapper: running run_atlas (--nthreads 12)
[2025-12-01 02:24:59] Arguments: --nthreads 12
[2025-12-01 02:24:59] Threads: 12
[2025-12-01 02:24:59] Checking for CVMFS
[2025-12-01 02:25:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 02:25:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 02:25:01] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 02:25:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 02:25:03] 2.11.5.0 3306151 289 90136 153512 3 488 36499390 45568001 5194 130560 0 452464 99.121 1548782 34929 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-01 02:25:03] CVMFS is ok
[2025-12-01 02:25:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 02:25:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 02:25:03] Further information can be found at the LHC@home message board.
[2025-12-01 02:25:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 02:25:03] Checking for apptainer binary...
[2025-12-01 02:25:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 02:25:03] Running /usr/bin/apptainer --version
[2025-12-01 02:25:04] apptainer version 1.4.1-1.el9
[2025-12-01 02:25:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 02:25:05] wns0041.triumf.lcg
[2025-12-01 02:25:05] apptainer works
[2025-12-01 02:25:06] Set ATHENA_PROC_NUMBER=12
[2025-12-01 02:25:06] Set ATHENA_CORE_NUMBER=12
[2025-12-01 02:25:06] Starting ATLAS job with PandaID=6908987435
[2025-12-01 02:25:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 02:32:07]  *** The last 200 lines of the pilot log: ***
[2025-12-01 02:32:07] 2025-12-01 10:31:00,185 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-01 02:32:07] 2025-12-01 10:31:00,185 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-01 02:32:07] 2025-12-01 10:31:00,185 | WARNING  | wrong length of table data, x=[1764584853.0], y=[2795.0] (must be same and length>=4)
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | could have reported an average CPU frequency of 1396 MHz (4 samples)
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | ..............................
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | . Timing measurements:
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | . get job = 1 s
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | . initial setup = 3 s
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | . payload setup = 15 s
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | . stage-in = 0 s
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | . payload execution = 51 s
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | . stage-out = 0 s
[2025-12-01 02:32:07] 2025-12-01 10:31:00,187 | INFO     | . log creation = 0 s
[2025-12-01 02:32:07] 2025-12-01 10:31:00,187 | INFO     | ..............................
[2025-12-01 02:32:07] 2025-12-01 10:31:00,187 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-01 02:32:07] 2025-12-01 10:31:00,187 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6908987435/pilotlog.txt
[2025-12-01 02:32:07] 2025-12-01 10:31:00,205 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-01 02:32:07] - Log from pilotlog.txt -
[2025-12-01 02:32:07] 2025-12-01 10:31:00,183 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6908987435/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 02:32:07] 2025-12-01 10:31:00,184 | INFO     | extracted standard info from prmon json
[2025-12-01 02:32:07] 2025-12-01 10:31:00,184 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 02:32:07] 2025-12-01 10:31:00,184 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 02:32:07] 2025-12-01 10:31:00,185 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-01 02:32:07] 2025-12-01 10:31:00,185 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-01 02:32:07] 2025-12-01 10:31:00,185 | WARNING  | wrong length of table data, x=[1764584853.0], y=[2795.0] (must be same and length>=4)
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | could have reported an average CPU frequency of 1396 MHz (4 samples)
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | ..............................
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | . Timing measurements:
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | . get job = 1 s
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | . initial setup = 3 s
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | . payload setup = 15 s
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | . stage-in = 0 s
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | . payload execution = 51 s
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | . stage-out = 0 s
[2025-12-01 02:32:07] 2025-12-01 10:31:00,187 | INFO     | . log creation = 0 s
[2025-12-01 02:32:07] 2025-12-01 10:31:00,187 | INFO     | ..............................
[2025-12-01 02:32:07] 2025-12-01 10:31:00,187 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-01 02:32:07] 2025-12-01 10:31:00,187 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6908987435/pilotlog.txt
[2025-12-01 02:32:07] 2025-12-01 10:31:00,205 | WARNING  | 
[2025-12-01 02:32:07] [begin log extracts]
[2025-12-01 02:32:07] - Log from pilotlog.txt -
[2025-12-01 02:32:07] 2025-12-01 10:31:00,183 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6908987435/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 02:32:07] 2025-12-01 10:31:00,184 | INFO     | extracted standard info from prmon json
[2025-12-01 02:32:07] 2025-12-01 10:31:00,184 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 02:32:07] 2025-12-01 10:31:00,184 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 02:32:07] 2025-12-01 10:31:00,185 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-01 02:32:07] 2025-12-01 10:31:00,185 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-01 02:32:07] 2025-12-01 10:31:00,185 | WARNING  | wrong length of table data, x=[1764584853.0], y=[2795.0] (must be same and length>=4)
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | could have reported an average CPU frequency of 1396 MHz (4 samples)
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | ..............................
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | . Timing measurements:
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | . get job = 1 s
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | . initial setup = 3 s
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | . payload setup = 15 s
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | . stage-in = 0 s
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | . payload execution = 51 s
[2025-12-01 02:32:07] 2025-12-01 10:31:00,186 | INFO     | . stage-out = 0 s
[2025-12-01 02:32:07] 2025-12-01 10:31:00,187 | INFO     | . log creation = 0 s
[2025-12-01 02:32:07] 2025-12-01 10:31:00,187 | INFO     | ..............................
[2025-12-01 02:32:07] 2025-12-01 10:31:00,187 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-01 02:32:07] 2025-12-01 10:31:00,187 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6908987435/pilotlog.txt
[2025-12-01 02:32:07] [end log extracts]
[2025-12-01 02:32:07] 2025-12-01 10:31:00,206 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-01 02:32:07] 2025-12-01 10:31:00,207 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-01 02:32:07] 2025-12-01 10:31:00,359 | INFO     | 
[2025-12-01 02:32:07] 2025-12-01 10:31:00,359 | INFO     | job summary report
[2025-12-01 02:32:07] 2025-12-01 10:31:00,359 | INFO     | --------------------------------------------------
[2025-12-01 02:32:07] 2025-12-01 10:31:00,359 | INFO     | PanDA job id: 6908987435
[2025-12-01 02:32:07] 2025-12-01 10:31:00,360 | INFO     | task id: 46965017
[2025-12-01 02:32:07] 2025-12-01 10:31:00,360 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-01 02:28:04,428 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-01 02:32:07] 2025-12-01 10:31:00,360 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 02:32:07] 2025-12-01 10:31:00,360 | INFO     | pilot state: failed 
[2025-12-01 02:32:07] 2025-12-01 10:31:00,360 | INFO     | transexitcode: 65
[2025-12-01 02:32:07] 2025-12-01 10:31:00,360 | INFO     | exeerrorcode: 65
[2025-12-01 02:32:07] 2025-12-01 10:31:00,360 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-01 02:32:07] 2025-12-01 10:31:00,360 | INFO     | exitcode: 65
[2025-12-01 02:32:07] 2025-12-01 10:31:00,360 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-01 02:32:07] 2025-12-01 10:31:00,360 | INFO     | cpuconsumptiontime: 26 s
[2025-12-01 02:32:07] 2025-12-01 10:31:00,360 | INFO     | nevents: 0
[2025-12-01 02:32:07] 2025-12-01 10:31:00,360 | INFO     | neventsw: 0
[2025-12-01 02:32:07] 2025-12-01 10:31:00,361 | INFO     | pid: 3544483
[2025-12-01 02:32:07] 2025-12-01 10:31:00,361 | INFO     | pgrp: 3544483
[2025-12-01 02:32:07] 2025-12-01 10:31:00,361 | INFO     | corecount: 12
[2025-12-01 02:32:07] 2025-12-01 10:31:00,361 | INFO     | event service: False
[2025-12-01 02:32:07] 2025-12-01 10:31:00,361 | INFO     | sizes: {0: 2283750, 1: 2283834, 2: 2283834, 3: 2284033, 4: 2284061, 15: 2284089, 22: 2284507, 26: 2284535, 71: 2307889, 73: 2312209, 237: 2312347}
[2025-12-01 02:32:07] 2025-12-01 10:31:00,361 | INFO     | --------------------------------------------------
[2025-12-01 02:32:07] 2025-12-01 10:31:00,361 | INFO     | 
[2025-12-01 02:32:07] 2025-12-01 10:31:00,361 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-01 02:32:07] 2025-12-01 10:31:00,558 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 02:32:07] 2025-12-01 10:31:00,558 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 02:32:07] 2025-12-01 10:31:00,558 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 02:32:07] 2025-12-01 10:31:00,558 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 02:32:07] 2025-12-01 10:31:00,558 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 02:32:07] 2025-12-01 10:31:00,558 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 02:32:07] 2025-12-01 10:31:00,559 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 02:32:07] 2025-12-01 10:31:00,559 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 02:32:07] 2025-12-01 10:31:00,559 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 02:32:07] 2025-12-01 10:31:00,559 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 02:32:07] 2025-12-01 10:31:00,559 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 02:32:07] 2025-12-01 10:31:00,559 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 02:32:07] 2025-12-01 10:31:00,559 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 02:32:07] 2025-12-01 10:31:00,559 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 02:32:07] 2025-12-01 10:31:00,559 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 02:32:07] 2025-12-01 10:31:00,559 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 02:32:07] 2025-12-01 10:31:00,560 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 02:32:07] 2025-12-01 10:31:00,560 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 02:32:07] 2025-12-01 10:31:00,560 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 02:32:07] 2025-12-01 10:31:00,560 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 02:32:07] 2025-12-01 10:31:00,560 | INFO     | job 6908987435 has completed (purged errors)
[2025-12-01 02:32:07] 2025-12-01 10:31:00,560 | INFO     | overall cleanup function is called
[2025-12-01 02:32:07] 2025-12-01 10:31:01,595 | INFO     | --- collectZombieJob: --- 10, [3544483]
[2025-12-01 02:32:07] 2025-12-01 10:31:01,595 | INFO     | zombie collector waiting for pid 3544483
[2025-12-01 02:32:07] 2025-12-01 10:31:01,595 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 02:32:07] 2025-12-01 10:31:01,595 | INFO     | collected zombie processes
[2025-12-01 02:32:07] 2025-12-01 10:31:01,596 | INFO     | will attempt to kill all subprocesses of pid=3544483
[2025-12-01 02:32:07] 2025-12-01 10:31:02,000 | INFO     | process IDs to be killed: [3544483] (in reverse order)
[2025-12-01 02:32:07] 2025-12-01 10:31:02,077 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 02:32:07] 2025-12-01 10:31:02,078 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 02:32:07] 2025-12-01 10:31:02,086 | INFO     | did not find any defunct processes belonging to 3544483
[2025-12-01 02:32:07] 2025-12-01 10:31:02,093 | INFO     | did not find any defunct processes belonging to 3544483
[2025-12-01 02:32:07] 2025-12-01 10:31:02,094 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 02:32:07] 2025-12-01 10:31:02,095 | INFO     | ready for new job
[2025-12-01 02:32:07] 2025-12-01 10:31:02,095 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 02:32:07] 2025-12-01 10:31:02,096 | INFO     | ***************************************
[2025-12-01 02:32:07] 2025-12-01 10:31:02,097 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 02:32:07] 2025-12-01 10:31:02,097 | INFO     | ***************************************
[2025-12-01 02:32:07] 2025-12-01 10:31:02,097 | INFO     | 
[2025-12-01 02:32:07] 2025-12-01 10:31:02,101 | INFO     | architecture information:
[2025-12-01 02:32:07] 2025-12-01 10:31:02,101 | INFO     | executing command: cat /etc/os-release
[2025-12-01 02:32:07] 2025-12-01 10:31:02,118 | INFO     | cat /etc/os-release:
[2025-12-01 02:32:07] NAME="CentOS Linux"
[2025-12-01 02:32:07] VERSION="7 (Core)"
[2025-12-01 02:32:07] ID="centos"
[2025-12-01 02:32:07] ID_LIKE="rhel fedora"
[2025-12-01 02:32:07] VERSION_ID="7"
[2025-12-01 02:32:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 02:32:07] ANSI_COLOR="0;31"
[2025-12-01 02:32:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 02:32:07] HOME_URL="https://www.centos.org/"
[2025-12-01 02:32:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 02:32:07] 
[2025-12-01 02:32:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 02:32:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 02:32:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 02:32:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 02:32:07] 
[2025-12-01 02:32:07] 2025-12-01 10:31:02,119 | INFO     | ***************************************
[2025-12-01 02:32:07] 2025-12-01 10:31:02,622 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-01 02:32:07] 2025-12-01 10:31:02,728 | INFO     | sufficient remaining disk space (2222744141824 B)
[2025-12-01 02:32:07] 2025-12-01 10:31:02,729 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 02:32:07] 2025-12-01 10:31:02,729 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 02:32:07] 2025-12-01 10:31:02,729 | INFO     | update_server=False
[2025-12-01 02:32:07] 2025-12-01 10:31:02,729 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 02:32:07] 2025-12-01 10:31:02,730 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 02:32:07] 2025-12-01 10:31:03,530 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 02:32:07] 2025-12-01 10:31:03,530 | INFO     | aborting loop
[2025-12-01 02:32:07] 2025-12-01 10:31:03,549 | INFO     | all job control threads have been joined
[2025-12-01 02:32:07] 2025-12-01 10:31:03,699 | INFO     | all data control threads have been joined
[2025-12-01 02:32:07] 2025-12-01 10:31:03,735 | INFO     | [job] retrieve thread has finished
[2025-12-01 02:32:07] 2025-12-01 10:31:04,101 | INFO     | all payload control threads have been joined
[2025-12-01 02:32:07] 2025-12-01 10:31:04,242 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 02:32:07] 2025-12-01 10:31:04,298 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 02:32:07] 2025-12-01 10:31:04,395 | INFO     | [job] validate thread has finished
[2025-12-01 02:32:07] 2025-12-01 10:31:04,536 | INFO     | [job] job monitor thread has finished
[2025-12-01 02:32:07] 2025-12-01 10:31:04,555 | INFO     | [job] control thread has finished
[2025-12-01 02:32:07] 2025-12-01 10:31:04,629 | INFO     | [payload] failed_post thread has finished
[2025-12-01 02:32:07] 2025-12-01 10:31:04,653 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 02:32:07] 2025-12-01 10:31:04,705 | INFO     | [data] control thread has finished
[2025-12-01 02:32:07] 2025-12-01 10:31:04,737 | INFO     | [data] copytool_out thread has finished
[2025-12-01 02:32:07] 2025-12-01 10:31:04,867 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 02:32:07] 2025-12-01 10:31:04,927 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 02:32:07] 2025-12-01 10:31:05,020 | INFO     | [data] copytool_in thread has finished
[2025-12-01 02:32:07] 2025-12-01 10:31:05,079 | INFO     | [payload] validate_post thread has finished
[2025-12-01 02:32:07] 2025-12-01 10:31:05,107 | INFO     | [payload] control thread has finished
[2025-12-01 02:32:07] 2025-12-01 10:31:05,317 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 02:32:07] 2025-12-01 10:31:06,323 | INFO     | [job] queue monitor thread has finished
[2025-12-01 02:32:07] 2025-12-01 10:31:08,936 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 02:32:07] 2025-12-01 10:31:34,651 | INFO     | PID=3537902 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-01 02:32:07] 2025-12-01 10:31:34,659 | INFO     | .. there are 7 such processes running
[2025-12-01 02:32:07] 2025-12-01 10:31:34,659 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 02:32:07] 2025-12-01 10:31:34,659 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 02:32:07] 2025-12-01 10:31:34,660 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 02:32:07] 2025-12-01 10:31:58,261 | INFO     | [monitor] cgroup control has ended
[2025-12-01 02:32:07] 2025-12-01 10:31:59,491 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140012333934400)>', '<ExcThread(monitor, started 140011932460800)>']
[2025-12-01 02:32:07] 2025-12-01 10:31:59,809 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 02:32:07] 2025-12-01 10:31:59,809 | INFO     | [monitor] control thread has ended
[2025-12-01 02:32:07] 2025-12-01 10:32:04,517 | INFO     | all workflow threads have been joined
[2025-12-01 02:32:07] 2025-12-01 10:32:04,517 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 02:32:07] 2025-12-01 10:32:04,518 | INFO     | traces error code: 0
[2025-12-01 02:32:07] 2025-12-01 10:32:04,518 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 02:32:07] 2025-12-01 10:32:05,068 [wrapper] ==== pilot stdout END ====
[2025-12-01 02:32:07] 2025-12-01 10:32:05,116 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 02:32:07] 2025-12-01 10:32:05,159 [wrapper] pilotpid: 3537902
[2025-12-01 02:32:07] 2025-12-01 10:32:05,198 [wrapper] Pilot exit status: 0
[2025-12-01 02:32:07] 2025-12-01 10:32:05,349 [wrapper] pandaids: 6908987435
[2025-12-01 02:32:07] 2025-12-01 10:32:06,013 [wrapper] cleanup supervisor_pilot 3537908 3537903
[2025-12-01 02:32:07] 2025-12-01 10:32:06,066 [wrapper] Test setup, not cleaning
[2025-12-01 02:32:07] 2025-12-01 10:32:06,105 [wrapper] apfmon messages muted
[2025-12-01 02:32:07] 2025-12-01 10:32:06,161 [wrapper] ==== wrapper stdout END ====
[2025-12-01 02:32:07] 2025-12-01 10:32:06,192 [wrapper] ==== wrapper stderr END ====
[2025-12-01 02:32:07]  *** Error codes and diagnostics ***
[2025-12-01 02:32:07]     "exeErrorCode": 65,
[2025-12-01 02:32:07]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-01 02:32:07]     "pilotErrorCode": 1305,
[2025-12-01 02:32:07]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-01 02:32:07]  *** Listing of results directory ***
[2025-12-01 02:32:07] total 271632
[2025-12-01 02:32:07] -rw-r--r--. 1 boinc boinc    576529 Nov 30 03:05 pilot3.tar.gz
[2025-12-01 02:32:07] -rwx------. 1 boinc boinc     36292 Nov 30 03:08 runpilot2-wrapper.sh
[2025-12-01 02:32:07] -rw-r--r--. 1 boinc boinc      5112 Nov 30 03:08 queuedata.json
[2025-12-01 02:32:07] -rw-r--r--. 1 boinc boinc       100 Dec  1 02:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 02:32:07] -rwxr-xr-x. 1 boinc boinc      7986 Dec  1 02:24 run_atlas
[2025-12-01 02:32:07] -rw-r--r--. 1 boinc boinc       105 Dec  1 02:24 job.xml
[2025-12-01 02:32:07] -rw-r--r--. 2 boinc boinc 273993791 Dec  1 02:24 EVNT.46965009._000061.pool.root.1
[2025-12-01 02:32:07] -rw-r--r--. 1 boinc boinc      6597 Dec  1 02:24 init_data.xml
[2025-12-01 02:32:07] -rw-r--r--. 2 boinc boinc     15847 Dec  1 02:24 start_atlas.sh
[2025-12-01 02:32:07] drwxrwx--x. 2 boinc boinc      4096 Dec  1 02:24 shared
[2025-12-01 02:32:07] -rw-r--r--. 2 boinc boinc    589975 Dec  1 02:24 input.tar.gz
[2025-12-01 02:32:07] -rw-r--r--. 1 boinc boinc         0 Dec  1 02:24 boinc_lockfile
[2025-12-01 02:32:07] -rw-r--r--. 1 boinc boinc      2652 Dec  1 02:25 pandaJob.out
[2025-12-01 02:32:07] -rw-------. 1 boinc boinc    992532 Dec  1 02:25 agis_schedconf.cvmfs.json
[2025-12-01 02:32:07] -rw-------. 1 boinc boinc   1516240 Dec  1 02:25 agis_ddmendpoints.agis.ALL.json
[2025-12-01 02:32:07] drwx------. 5 boinc boinc      4096 Dec  1 02:25 pilot3
[2025-12-01 02:32:07] -rw-r--r--. 1 boinc boinc       524 Dec  1 02:28 boinc_task_state.xml
[2025-12-01 02:32:07] -rw-------. 1 boinc boinc       947 Dec  1 02:28 memory_monitor_summary.json
[2025-12-01 02:32:07] -rw-------. 1 boinc boinc     21878 Dec  1 02:28 log.46965017._001593.job.log.tgz.1
[2025-12-01 02:32:07] -rw-------. 1 boinc boinc      8391 Dec  1 02:31 heartbeat.json
[2025-12-01 02:32:07] -rw-------. 1 boinc boinc        95 Dec  1 02:31 pilot_heartbeat.json
[2025-12-01 02:32:07] -rw-------. 1 boinc boinc      4822 Dec  1 02:32 pilotlog.txt
[2025-12-01 02:32:07] -rw-r--r--. 1 boinc boinc      8192 Dec  1 02:32 boinc_mmap_file
[2025-12-01 02:32:07] -rw-r--r--. 1 boinc boinc        23 Dec  1 02:32 wrapper_checkpoint.txt
[2025-12-01 02:32:07] -rw-------. 1 boinc boinc    102069 Dec  1 02:32 log.46965017._001593.job.log.1
[2025-12-01 02:32:07] -rw-------. 1 boinc boinc       188 Dec  1 02:32 output.list
[2025-12-01 02:32:07] -rw-r--r--. 1 boinc boinc       620 Dec  1 02:32 runtime_log
[2025-12-01 02:32:07] -rw-------. 1 boinc boinc    143360 Dec  1 02:32 result.tar.gz
[2025-12-01 02:32:07] -rw-r--r--. 1 boinc boinc      8636 Dec  1 02:32 runtime_log.err
[2025-12-01 02:32:07] -rw-------. 1 boinc boinc       644 Dec  1 02:32 oyHODmITuj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKNMKDmKxgEln.diag
[2025-12-01 02:32:07] -rw-r--r--. 1 boinc boinc     21944 Dec  1 02:32 stderr.txt
[2025-12-01 02:32:07] No HITS result produced
[2025-12-01 02:32:07]  *** Contents of shared directory: ***
[2025-12-01 02:32:07] total 268312
[2025-12-01 02:32:07] -rw-r--r--. 2 boinc boinc 273993791 Dec  1 02:24 ATLAS.root_0
[2025-12-01 02:32:07] -rw-r--r--. 2 boinc boinc     15847 Dec  1 02:24 start_atlas.sh
[2025-12-01 02:32:07] -rw-r--r--. 2 boinc boinc    589975 Dec  1 02:24 input.tar.gz
[2025-12-01 02:32:07] -rw-------. 1 boinc boinc    143360 Dec  1 02:32 result.tar.gz
02:32:08 (3534220): run_atlas exited; CPU time 40.390606
02:32:08 (3534220): called boinc_finish(0)

</stderr_txt>
]]>

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