Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:46:05 (20705): wrapper (7.7.26015): starting
20:46:05 (20705): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 20:46:05] Arguments: --nthreads 8
[2025-12-02 20:46:05] Threads: 8
[2025-12-02 20:46:05] Checking for CVMFS
[2025-12-02 20:46:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 20:46:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 20:46:07] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 20:46:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 20:46:08] 2.11.2.0 23125 181253 135128 153567 1 72 15757283 25165824 2504 130560 10 61027976 99.889 29729614 1969 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-02 20:46:08] CVMFS is ok
[2025-12-02 20:46:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 20:46:08] Checking for apptainer binary...
[2025-12-02 20:46:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 20:46:08] Running /usr/bin/apptainer --version
[2025-12-02 20:46:08] apptainer version 1.3.2-1.el7
[2025-12-02 20:46:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 20:46:12] cg-vwn409.simple-grid.lan
[2025-12-02 20:46:12] apptainer works
[2025-12-02 20:46:12] Set ATHENA_PROC_NUMBER=8
[2025-12-02 20:46:12] Set ATHENA_CORE_NUMBER=8
[2025-12-02 20:46:13] Starting ATLAS job with PandaID=6901110307
[2025-12-02 20:46:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 16:56:19]  *** The last 200 lines of the pilot log: ***
[2025-12-03 16:56:19] 2025-12-03 15:55:31,924 | INFO     | time since job start (72338s) is within the limit (172800.0s)
[2025-12-03 16:56:19] 2025-12-03 15:55:32,401 | INFO     | monitor loop #4956: job 0:6901110307 is in state 'finished'
[2025-12-03 16:56:19] 2025-12-03 15:55:32,401 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 16:56:19] 2025-12-03 15:55:33,936 | INFO     | time since job start (72340s) is within the limit (172800.0s)
[2025-12-03 16:56:19] 2025-12-03 15:55:34,909 | INFO     | monitor loop #4957: job 0:6901110307 is in state 'finished'
[2025-12-03 16:56:19] 2025-12-03 15:55:34,909 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 16:56:19] 2025-12-03 15:55:35,943 | INFO     | time since job start (72342s) is within the limit (172800.0s)
[2025-12-03 16:56:19] 2025-12-03 15:55:37,416 | INFO     | monitor loop #4958: job 0:6901110307 is in state 'finished'
[2025-12-03 16:56:19] 2025-12-03 15:55:37,416 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 16:56:19] 2025-12-03 15:55:37,950 | INFO     | time since job start (72344s) is within the limit (172800.0s)
[2025-12-03 16:56:19] 2025-12-03 15:55:39,922 | INFO     | monitor loop #4959: job 0:6901110307 is in state 'finished'
[2025-12-03 16:56:19] 2025-12-03 15:55:39,922 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 16:56:19] 2025-12-03 15:55:39,956 | INFO     | time since job start (72346s) is within the limit (172800.0s)
[2025-12-03 16:56:19] 2025-12-03 15:55:41,963 | INFO     | time since job start (72348s) is within the limit (172800.0s)
[2025-12-03 16:56:19] 2025-12-03 15:55:42,433 | INFO     | monitor loop #4960: job 0:6901110307 is in state 'finished'
[2025-12-03 16:56:19] 2025-12-03 15:55:42,433 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 16:56:19] 2025-12-03 15:55:42,782 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-03 16:56:19] 2025-12-03 15:55:42,783 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-03 16:56:19] 2025-12-03 15:55:42,785 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6901110307/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 16:56:19] 2025-12-03 15:55:42,786 | INFO     | extracted standard info from prmon json
[2025-12-03 16:56:19] 2025-12-03 15:55:42,786 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 16:56:19] 2025-12-03 15:55:42,786 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 16:56:19] 2025-12-03 15:55:42,820 | INFO     | fitting pss+swap vs Time
[2025-12-03 16:56:19] 2025-12-03 15:55:42,822 | INFO     | sum of square deviations: 501743828611.45447
[2025-12-03 16:56:19] 2025-12-03 15:55:42,909 | INFO     | sum of deviations: 2680300530748.3525
[2025-12-03 16:56:19] 2025-12-03 15:55:42,909 | INFO     | mean x: 1764741409.5417376
[2025-12-03 16:56:19] 2025-12-03 15:55:42,910 | INFO     | mean y: 3336381.6865417375
[2025-12-03 16:56:19] 2025-12-03 15:55:42,910 | INFO     | intersect: -9423859463.887493
[2025-12-03 16:56:19] 2025-12-03 15:55:42,911 | INFO     | chi2: 20.466502251651384
[2025-12-03 16:56:19] 2025-12-03 15:55:42,913 | INFO     | sum of square deviations: 495360761003.5049
[2025-12-03 16:56:19] 2025-12-03 15:55:42,986 | INFO     | sum of deviations: 3160581753195.861
[2025-12-03 16:56:19] 2025-12-03 15:55:42,986 | INFO     | mean x: 1764741257.0461934
[2025-12-03 16:56:19] 2025-12-03 15:55:42,986 | INFO     | mean y: 3347858.2617621897
[2025-12-03 16:56:19] 2025-12-03 15:55:42,987 | INFO     | intersect: -11256342967.53754
[2025-12-03 16:56:19] 2025-12-03 15:55:42,988 | INFO     | chi2: 16.986259311363597
[2025-12-03 16:56:19] 2025-12-03 15:55:42,988 | INFO     | current chi2=16.986259311363597 (change=17.004580936671662 %)
[2025-12-03 16:56:19] 2025-12-03 15:55:42,988 | INFO     | right removable region: 1168
[2025-12-03 16:56:19] 2025-12-03 15:55:42,990 | INFO     | sum of square deviations: 495360014973.5054
[2025-12-03 16:56:19] 2025-12-03 15:55:43,039 | INFO     | sum of deviations: 2086738471022.4385
[2025-12-03 16:56:19] 2025-12-03 15:55:43,040 | INFO     | mean x: 1764741562.0461934
[2025-12-03 16:56:19] 2025-12-03 15:55:43,040 | INFO     | mean y: 3350561.232677502
[2025-12-03 16:56:19] 2025-12-03 15:55:43,040 | INFO     | intersect: -7430745848.690492
[2025-12-03 16:56:19] 2025-12-03 15:55:43,041 | INFO     | chi2: 15.469454945672593
[2025-12-03 16:56:19] 2025-12-03 15:55:43,042 | INFO     | current chi2=15.469454945672593 (change=24.41573672206541 %)
[2025-12-03 16:56:19] 2025-12-03 15:55:43,042 | INFO     | left removable region: 10
[2025-12-03 16:56:19] 2025-12-03 15:55:43,043 | INFO     | sum of square deviations: 481507586113.8519
[2025-12-03 16:56:19] 2025-12-03 15:55:43,084 | INFO     | sum of deviations: 2153246831623.7031
[2025-12-03 16:56:19] 2025-12-03 15:55:43,084 | INFO     | mean x: 1764741531.5561314
[2025-12-03 16:56:19] 2025-12-03 15:55:43,084 | INFO     | mean y: 3377804.4430051814
[2025-12-03 16:56:19] 2025-12-03 15:55:43,084 | INFO     | intersect: -7888344405.224348
[2025-12-03 16:56:19] 2025-12-03 15:55:43,086 | INFO     | chi2: 7.095858509040166
[2025-12-03 16:56:19] 2025-12-03 15:55:43,086 | INFO     | current memory leak: 4.47 B/s (using 1158 data points, chi2=7.10)
[2025-12-03 16:56:19] 2025-12-03 15:55:43,087 | INFO     | could have reported an average CPU frequency of 1999 MHz (41 samples)
[2025-12-03 16:56:19] 2025-12-03 15:55:43,087 | INFO     | ..............................
[2025-12-03 16:56:19] 2025-12-03 15:55:43,087 | INFO     | . Timing measurements:
[2025-12-03 16:56:19] 2025-12-03 15:55:43,087 | INFO     | . get job = 0 s
[2025-12-03 16:56:19] 2025-12-03 15:55:43,087 | INFO     | . initial setup = 6 s
[2025-12-03 16:56:19] 2025-12-03 15:55:43,088 | INFO     | . payload setup = 302 s
[2025-12-03 16:56:19] 2025-12-03 15:55:43,088 | INFO     | . stage-in = 0 s
[2025-12-03 16:56:19] 2025-12-03 15:55:43,088 | INFO     | . payload execution = 71756 s
[2025-12-03 16:56:19] 2025-12-03 15:55:43,088 | INFO     | . stage-out = 4 s
[2025-12-03 16:56:19] 2025-12-03 15:55:43,088 | INFO     | . log creation = 2 s
[2025-12-03 16:56:19] 2025-12-03 15:55:43,088 | INFO     | ..............................
[2025-12-03 16:56:19] 2025-12-03 15:55:43,203 | INFO     | 
[2025-12-03 16:56:19] 2025-12-03 15:55:43,203 | INFO     | job summary report
[2025-12-03 16:56:19] 2025-12-03 15:55:43,203 | INFO     | --------------------------------------------------
[2025-12-03 16:56:19] 2025-12-03 15:55:43,203 | INFO     | PanDA job id: 6901110307
[2025-12-03 16:56:19] 2025-12-03 15:55:43,203 | INFO     | task id: 47531058
[2025-12-03 16:56:19] 2025-12-03 15:55:43,203 | INFO     | errors: (none)
[2025-12-03 16:56:19] 2025-12-03 15:55:43,204 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 16:56:19] 2025-12-03 15:55:43,204 | INFO     | pilot state: finished 
[2025-12-03 16:56:19] 2025-12-03 15:55:43,204 | INFO     | transexitcode: 0
[2025-12-03 16:56:19] 2025-12-03 15:55:43,204 | INFO     | exeerrorcode: 0
[2025-12-03 16:56:19] 2025-12-03 15:55:43,204 | INFO     | exeerrordiag: 
[2025-12-03 16:56:19] 2025-12-03 15:55:43,204 | INFO     | exitcode: 0
[2025-12-03 16:56:19] 2025-12-03 15:55:43,204 | INFO     | exitmsg: OK
[2025-12-03 16:56:19] 2025-12-03 15:55:43,204 | INFO     | cpuconsumptiontime: 268496 s
[2025-12-03 16:56:19] 2025-12-03 15:55:43,205 | INFO     | nevents: 1000
[2025-12-03 16:56:19] 2025-12-03 15:55:43,205 | INFO     | neventsw: 0
[2025-12-03 16:56:19] 2025-12-03 15:55:43,205 | INFO     | pid: 31814
[2025-12-03 16:56:19] 2025-12-03 15:55:43,205 | INFO     | pgrp: 31814
[2025-12-03 16:56:19] 2025-12-03 15:55:43,205 | INFO     | corecount: 8
[2025-12-03 16:56:19] 2025-12-03 15:55:43,205 | INFO     | event service: False
[2025-12-03 16:56:19] 2025-12-03 15:55:43,205 | INFO     | sizes: {0: 2283626, 1: 2284311, 2: 2284510, 13: 2284510, 23: 2284566, 34: 2284594, 45: 2284750, 55: 2284778, 66: 2284806, 77: 2284834, 88: 2284890, 89: 2285460, 98
[2025-12-03 16:56:19] 2025-12-03 15:55:43,205 | INFO     | --------------------------------------------------
[2025-12-03 16:56:19] 2025-12-03 15:55:43,205 | INFO     | 
[2025-12-03 16:56:19] 2025-12-03 15:55:43,206 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-12-03 16:56:19] 2025-12-03 15:55:43,693 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 16:56:19] 2025-12-03 15:55:43,694 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 16:56:19] 2025-12-03 15:55:43,694 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 16:56:19] 2025-12-03 15:55:43,694 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 16:56:19] 2025-12-03 15:55:43,694 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 16:56:19] 2025-12-03 15:55:43,694 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 16:56:19] 2025-12-03 15:55:43,694 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 16:56:19] 2025-12-03 15:55:43,694 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 16:56:19] 2025-12-03 15:55:43,695 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 16:56:19] 2025-12-03 15:55:43,695 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 16:56:19] 2025-12-03 15:55:43,695 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 16:56:19] 2025-12-03 15:55:43,695 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 16:56:19] 2025-12-03 15:55:43,695 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 16:56:19] 2025-12-03 15:55:43,695 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 16:56:19] 2025-12-03 15:55:43,695 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 16:56:19] 2025-12-03 15:55:43,695 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 16:56:19] 2025-12-03 15:55:43,695 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 16:56:19] 2025-12-03 15:55:43,695 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 16:56:19] 2025-12-03 15:55:43,696 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 16:56:19] 2025-12-03 15:55:43,696 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 16:56:19] 2025-12-03 15:55:43,696 | INFO     | job 6901110307 has completed (purged errors)
[2025-12-03 16:56:19] 2025-12-03 15:55:43,696 | INFO     | overall cleanup function is called
[2025-12-03 16:56:19] 2025-12-03 15:55:44,714 | INFO     | --- collectZombieJob: --- 10, [31814]
[2025-12-03 16:56:19] 2025-12-03 15:55:44,714 | INFO     | zombie collector waiting for pid 31814
[2025-12-03 16:56:19] 2025-12-03 15:55:44,714 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 16:56:19] 2025-12-03 15:55:44,714 | INFO     | collected zombie processes
[2025-12-03 16:56:19] 2025-12-03 15:55:44,714 | INFO     | will attempt to kill all subprocesses of pid=31814
[2025-12-03 16:56:19] 2025-12-03 15:55:44,832 | INFO     | process IDs to be killed: [31814] (in reverse order)
[2025-12-03 16:56:19] 2025-12-03 15:55:44,915 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 16:56:19] 2025-12-03 15:55:44,916 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 16:56:19] 2025-12-03 15:55:44,922 | INFO     | did not find any defunct processes belonging to 31814
[2025-12-03 16:56:19] 2025-12-03 15:55:44,925 | INFO     | did not find any defunct processes belonging to 31814
[2025-12-03 16:56:19] 2025-12-03 15:55:44,927 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 16:56:19] 2025-12-03 15:55:44,928 | INFO     | ready for new job
[2025-12-03 16:56:19] 2025-12-03 15:55:44,928 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 16:56:19] 2025-12-03 15:55:44,932 | INFO     | ***************************************
[2025-12-03 16:56:19] 2025-12-03 15:55:44,933 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 16:56:19] 2025-12-03 15:55:44,933 | INFO     | ***************************************
[2025-12-03 16:56:19] 2025-12-03 15:55:44,933 | INFO     | 
[2025-12-03 16:56:19] 2025-12-03 15:55:44,934 | INFO     | pilot is running in a VM
[2025-12-03 16:56:19] 2025-12-03 15:55:44,934 | INFO     | architecture information:
[2025-12-03 16:56:19] 2025-12-03 15:55:44,934 | INFO     | executing command: cat /etc/os-release
[2025-12-03 16:56:19] 2025-12-03 15:55:45,033 | INFO     | cat /etc/os-release:
[2025-12-03 16:56:19] NAME="CentOS Linux"
[2025-12-03 16:56:19] VERSION="7 (Core)"
[2025-12-03 16:56:19] ID="centos"
[2025-12-03 16:56:19] ID_LIKE="rhel fedora"
[2025-12-03 16:56:19] VERSION_ID="7"
[2025-12-03 16:56:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 16:56:19] ANSI_COLOR="0;31"
[2025-12-03 16:56:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 16:56:19] HOME_URL="https://www.centos.org/"
[2025-12-03 16:56:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 16:56:19] 
[2025-12-03 16:56:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 16:56:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 16:56:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 16:56:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 16:56:19] 
[2025-12-03 16:56:19] 2025-12-03 15:55:45,034 | INFO     | ***************************************
[2025-12-03 16:56:19] 2025-12-03 15:55:45,537 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-12-03 16:56:19] 2025-12-03 15:55:45,740 | INFO     | sufficient remaining disk space (496026779648 B)
[2025-12-03 16:56:19] 2025-12-03 15:55:45,740 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 16:56:19] 2025-12-03 15:55:45,740 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 16:56:19] 2025-12-03 15:55:45,741 | INFO     | update_server=False
[2025-12-03 16:56:19] 2025-12-03 15:55:45,741 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 16:56:19] 2025-12-03 15:55:45,742 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 16:56:19] 2025-12-03 15:55:45,944 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 16:56:19] 2025-12-03 15:55:45,944 | INFO     | aborting loop
[2025-12-03 16:56:19] 2025-12-03 15:55:46,156 | INFO     | all payload control threads have been joined
[2025-12-03 16:56:19] 2025-12-03 15:55:46,175 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 16:56:19] 2025-12-03 15:55:46,371 | INFO     | all job control threads have been joined
[2025-12-03 16:56:19] 2025-12-03 15:55:46,712 | INFO     | all data control threads have been joined
[2025-12-03 16:56:19] 2025-12-03 15:55:46,747 | INFO     | [job] retrieve thread has finished
[2025-12-03 16:56:19] 2025-12-03 15:55:46,950 | INFO     | [job] job monitor thread has finished
[2025-12-03 16:56:19] 2025-12-03 15:55:47,162 | INFO     | [payload] control thread has finished
[2025-12-03 16:56:19] 2025-12-03 15:55:47,377 | INFO     | [job] control thread has finished
[2025-12-03 16:56:19] 2025-12-03 15:55:47,438 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 16:56:19] 2025-12-03 15:55:47,462 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 16:56:19] 2025-12-03 15:55:47,618 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 16:56:19] 2025-12-03 15:55:47,718 | INFO     | [data] control thread has finished
[2025-12-03 16:56:19] 2025-12-03 15:55:47,866 | INFO     | [data] copytool_in thread has finished
[2025-12-03 16:56:19] 2025-12-03 15:55:47,893 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 16:56:19] 2025-12-03 15:55:47,903 | INFO     | [payload] failed_post thread has finished
[2025-12-03 16:56:19] 2025-12-03 15:55:47,955 | INFO     | [job] validate thread has finished
[2025-12-03 16:56:19] 2025-12-03 15:55:48,182 | INFO     | [data] copytool_out thread has finished
[2025-12-03 16:56:19] 2025-12-03 15:55:48,195 | INFO     | [payload] validate_post thread has finished
[2025-12-03 16:56:19] 2025-12-03 15:55:48,220 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 16:56:19] 2025-12-03 15:55:49,226 | INFO     | [job] queue monitor thread has finished
[2025-12-03 16:56:19] 2025-12-03 15:55:49,750 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 16:56:19] 2025-12-03 15:55:58,794 | INFO     | [monitor] cgroup control has ended
[2025-12-03 16:56:19] 2025-12-03 15:56:00,201 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140228323977024)>', '<ExcThread(monitor, started 140227595204352)>']
[2025-12-03 16:56:19] 2025-12-03 15:56:05,227 | INFO     | all workflow threads have been joined
[2025-12-03 16:56:19] 2025-12-03 15:56:05,227 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 16:56:19] 2025-12-03 15:56:05,227 | INFO     | traces error code: 0
[2025-12-03 16:56:19] 2025-12-03 15:56:05,228 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 16:56:19] 2025-12-03 15:56:15,148 | INFO     | PID=24558 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-03 16:56:19] 2025-12-03 15:56:15,148 | INFO     | .. there are 9 such processes running
[2025-12-03 16:56:19] 2025-12-03 15:56:15,150 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 16:56:19] 2025-12-03 15:56:15,150 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 16:56:19] 2025-12-03 15:56:15,150 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 16:56:19] 2025-12-03 15:56:15,150 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 16:56:19] 2025-12-03 15:56:15,150 | INFO     | [monitor] control thread has ended
[2025-12-03 16:56:19] 2025-12-03 15:56:15,428 [wrapper] ==== pilot stdout END ====
[2025-12-03 16:56:19] 2025-12-03 15:56:15,494 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 16:56:19] 2025-12-03 15:56:15,538 [wrapper] pilotpid: 24558
[2025-12-03 16:56:19] 2025-12-03 15:56:15,626 [wrapper] Pilot exit status: 0
[2025-12-03 16:56:19] 2025-12-03 15:56:15,902 [wrapper] pandaids: 6901110307
[2025-12-03 16:56:19] 2025-12-03 15:56:16,407 [wrapper] cleanup supervisor_pilot  9867 24559
[2025-12-03 16:56:19] 2025-12-03 15:56:16,477 [wrapper] Test setup, not cleaning
[2025-12-03 16:56:19] 2025-12-03 15:56:16,533 [wrapper] apfmon messages muted
[2025-12-03 16:56:19] 2025-12-03 15:56:16,650 [wrapper] ==== wrapper stdout END ====
[2025-12-03 16:56:19] 2025-12-03 15:56:16,767 [wrapper] ==== wrapper stderr END ====
[2025-12-03 16:56:19]  *** Error codes and diagnostics ***
[2025-12-03 16:56:19]     "exeErrorCode": 0,
[2025-12-03 16:56:19]     "exeErrorDiag": "",
[2025-12-03 16:56:19]     "pilotErrorCode": 0,
[2025-12-03 16:56:19]     "pilotErrorDiag": "",
[2025-12-03 16:56:19]  *** Listing of results directory ***
[2025-12-03 16:56:19] total 1091132
[2025-12-03 16:56:19] -rw-r--r--. 1 boinc boinc    576529 Nov 29 10:19 pilot3.tar.gz
[2025-12-03 16:56:19] -rw-r--r--. 1 boinc boinc      5112 Nov 29 10:19 queuedata.json
[2025-12-03 16:56:19] -rwx------. 1 boinc boinc     36292 Nov 29 10:19 runpilot2-wrapper.sh
[2025-12-03 16:56:19] -rw-r--r--. 1 boinc boinc       100 Dec  2 20:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 16:56:19] -rwxr-xr-x. 1 boinc boinc      7986 Dec  2 20:46 run_atlas
[2025-12-03 16:56:19] -rw-r--r--. 1 boinc boinc       105 Dec  2 20:46 job.xml
[2025-12-03 16:56:19] -rw-r--r--. 1 boinc boinc      6393 Dec  2 20:46 init_data.xml
[2025-12-03 16:56:19] -rw-r--r--. 2 boinc boinc 377602866 Dec  2 20:46 EVNT.47531050._000550.pool.root.1
[2025-12-03 16:56:19] -rw-r--r--. 2 boinc boinc     15847 Dec  2 20:46 start_atlas.sh
[2025-12-03 16:56:19] drwxrwx--x. 2 boinc boinc        68 Dec  2 20:46 shared
[2025-12-03 16:56:19] -rw-r--r--. 2 boinc boinc    590121 Dec  2 20:46 input.tar.gz
[2025-12-03 16:56:19] -rw-r--r--. 1 boinc boinc         0 Dec  2 20:46 boinc_lockfile
[2025-12-03 16:56:19] -rw-r--r--. 1 boinc boinc      2881 Dec  2 20:46 pandaJob.out
[2025-12-03 16:56:19] -rw-------. 1 boinc boinc    989224 Dec  2 20:49 agis_schedconf.cvmfs.json
[2025-12-03 16:56:19] drwx------. 5 boinc boinc      4096 Dec  2 20:49 pilot3
[2025-12-03 16:56:19] -rw-r--r--. 1 boinc boinc       533 Dec  3 16:33 boinc_task_state.xml
[2025-12-03 16:56:19] -rw-------. 1 boinc boinc 711588618 Dec  3 16:53 HITS.47531058._001660.pool.root.1
[2025-12-03 16:56:19] -rw-------. 1 boinc boinc      1033 Dec  3 16:53 memory_monitor_summary.json
[2025-12-03 16:56:19] -rw-------. 1 boinc boinc   1516240 Dec  3 16:54 agis_ddmendpoints.agis.ALL.json
[2025-12-03 16:56:19] -rw-------. 1 boinc boinc   2402769 Dec  3 16:54 log.47531058._001660.job.log.tgz.1
[2025-12-03 16:56:19] -rw-------. 1 boinc boinc     26874 Dec  3 16:55 heartbeat.json
[2025-12-03 16:56:19] -rw-r--r--. 1 boinc boinc        29 Dec  3 16:56 wrapper_checkpoint.txt
[2025-12-03 16:56:19] -rw-r--r--. 1 boinc boinc      8192 Dec  3 16:56 boinc_mmap_file
[2025-12-03 16:56:19] -rw-------. 1 boinc boinc        95 Dec  3 16:56 pilot_heartbeat.json
[2025-12-03 16:56:19] -rw-------. 1 boinc boinc       820 Dec  3 16:56 pilotlog.txt
[2025-12-03 16:56:19] -rw-------. 1 boinc boinc   9697531 Dec  3 16:56 log.47531058._001660.job.log.1
[2025-12-03 16:56:19] -rw-------. 1 boinc boinc       353 Dec  3 16:56 output.list
[2025-12-03 16:56:19] -rw-r--r--. 1 boinc boinc       620 Dec  3 16:56 runtime_log
[2025-12-03 16:56:19] -rw-------. 1 boinc boinc  12134400 Dec  3 16:56 result.tar.gz
[2025-12-03 16:56:19] -rw-------. 1 boinc boinc       661 Dec  3 16:56 SuVNDmxHWj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzyOKDmf3pc3n.diag
[2025-12-03 16:56:19] -rw-r--r--. 1 boinc boinc      8817 Dec  3 16:56 runtime_log.err
[2025-12-03 16:56:19] -rw-r--r--. 1 boinc boinc     21445 Dec  3 16:56 stderr.txt
[2025-12-03 16:56:19] HITS file was successfully produced:
[2025-12-03 16:56:19] -rw-------. 1 boinc boinc 711588618 Dec  3 16:53 shared/HITS.pool.root.1
[2025-12-03 16:56:19]  *** Contents of shared directory: ***
[2025-12-03 16:56:19] total 1076116
[2025-12-03 16:56:19] -rw-r--r--. 2 boinc boinc 377602866 Dec  2 20:46 ATLAS.root_0
[2025-12-03 16:56:19] -rw-r--r--. 2 boinc boinc     15847 Dec  2 20:46 start_atlas.sh
[2025-12-03 16:56:19] -rw-r--r--. 2 boinc boinc    590121 Dec  2 20:46 input.tar.gz
[2025-12-03 16:56:19] -rw-------. 1 boinc boinc 711588618 Dec  3 16:53 HITS.pool.root.1
[2025-12-03 16:56:19] -rw-------. 1 boinc boinc  12134400 Dec  3 16:56 result.tar.gz
16:56:21 (20705): run_atlas exited; CPU time 268838.244604
16:56:21 (20705): called boinc_finish(0)

</stderr_txt>
]]>

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