Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
12:25:09 (3947383): wrapper (7.7.26015): starting
12:25:09 (3947383): wrapper: running run_atlas (--nthreads 12)
[2025-12-01 12:25:09] Arguments: --nthreads 12
[2025-12-01 12:25:09] Threads: 12
[2025-12-01 12:25:09] Checking for CVMFS
[2025-12-01 12:25:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 12:25:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 12:25:09] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 12:25:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 12:25:09] 2.13.0.0 498242 17894 43992 153516 1 79 74354010 82903040 1302 130560 29 8479871 99.967 784799 325 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-01 12:25:09] CVMFS is ok
[2025-12-01 12:25:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 12:25:09] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-01 12:25:09] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-01 12:25:09] Further information can be found at the LHC@home message board.
[2025-12-01 12:25:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 12:25:09] Checking for apptainer binary...
[2025-12-01 12:25:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 12:25:09] Running /usr/bin/apptainer --version
[2025-12-01 12:25:09] apptainer version 1.4.4
[2025-12-01 12:25:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 12:25:09] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) torr
[2025-12-01 12:25:09] apptainer works
[2025-12-01 12:25:09] Set ATHENA_PROC_NUMBER=12
[2025-12-01 12:25:09] Set ATHENA_CORE_NUMBER=12
[2025-12-01 12:25:09] Starting ATLAS job with PandaID=6899500570
[2025-12-01 12:25:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 15:53:01]  *** The last 200 lines of the pilot log: ***
[2025-12-01 15:53:01] 2025-12-01 15:52:29,286 | INFO     | total number of processed events: 1000 (read)
[2025-12-01 15:53:01] 2025-12-01 15:52:29,286 | INFO     | executing command: lscpu
[2025-12-01 15:53:01] 2025-12-01 15:52:29,294 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-01 15:53:01] 2025-12-01 15:52:30,368 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-01 15:53:01] 2025-12-01 15:52:30,369 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3225.85325
[2025-12-01 15:53:01] 2025-12-01 15:52:30,370 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6899500570/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 15:53:01] 2025-12-01 15:52:30,370 | INFO     | extracted standard info from prmon json
[2025-12-01 15:53:01] 2025-12-01 15:52:30,370 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 15:53:01] 2025-12-01 15:52:30,370 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 15:53:01] 2025-12-01 15:52:30,371 | INFO     | fitting pss+swap vs Time
[2025-12-01 15:53:01] 2025-12-01 15:52:30,371 | INFO     | sum of square deviations: 2632451364.8774567
[2025-12-01 15:53:01] 2025-12-01 15:52:30,372 | INFO     | sum of deviations: 99483314951.62737
[2025-12-01 15:53:01] 2025-12-01 15:52:30,372 | INFO     | mean x: 1764598120.6421568
[2025-12-01 15:53:01] 2025-12-01 15:52:30,372 | INFO     | mean y: 3459277.3921568627
[2025-12-01 15:53:01] 2025-12-01 15:52:30,372 | INFO     | intersect: -66682699844.512596
[2025-12-01 15:53:01] 2025-12-01 15:52:30,372 | INFO     | chi2: 2.966890293800105
[2025-12-01 15:53:01] 2025-12-01 15:52:30,372 | INFO     | sum of square deviations: 2443600854.773879
[2025-12-01 15:53:01] 2025-12-01 15:52:30,372 | INFO     | sum of deviations: 138994980408.91962
[2025-12-01 15:53:01] 2025-12-01 15:52:30,372 | INFO     | mean x: 1764597968.1457286
[2025-12-01 15:53:01] 2025-12-01 15:52:30,373 | INFO     | mean y: 3490773.1407035175
[2025-12-01 15:53:01] 2025-12-01 15:52:30,373 | INFO     | intersect: -100368981896.8
[2025-12-01 15:53:01] 2025-12-01 15:52:30,373 | INFO     | chi2: 1.5084260895582093
[2025-12-01 15:53:01] 2025-12-01 15:52:30,373 | INFO     | current chi2=1.5084260895582093 (change=49.158009222303924 %)
[2025-12-01 15:53:01] 2025-12-01 15:52:30,373 | INFO     | sum of square deviations: 2263994436.458766
[2025-12-01 15:53:01] 2025-12-01 15:52:30,373 | INFO     | sum of deviations: 132193783438.4227
[2025-12-01 15:53:01] 2025-12-01 15:52:30,373 | INFO     | mean x: 1764597815.6443298
[2025-12-01 15:53:01] 2025-12-01 15:52:30,373 | INFO     | mean y: 3484999.0206185565
[2025-12-01 15:53:01] 2025-12-01 15:52:30,373 | INFO     | intersect: -103030717621.22456
[2025-12-01 15:53:01] 2025-12-01 15:52:30,373 | INFO     | chi2: 1.5070446693747412
[2025-12-01 15:53:01] 2025-12-01 15:52:30,373 | INFO     | current chi2=1.5070446693747412 (change=0.0915802367136655 %)
[2025-12-01 15:53:01] 2025-12-01 15:52:30,373 | INFO     | right removable region: 193
[2025-12-01 15:53:01] 2025-12-01 15:52:30,373 | INFO     | sum of square deviations: 2443595608.0603147
[2025-12-01 15:53:01] 2025-12-01 15:52:30,374 | INFO     | sum of deviations: 53496411789.778946
[2025-12-01 15:53:01] 2025-12-01 15:52:30,374 | INFO     | mean x: 1764598273.1407034
[2025-12-01 15:53:01] 2025-12-01 15:52:30,374 | INFO     | mean y: 3496028.1507537686
[2025-12-01 15:53:01] 2025-12-01 15:52:30,374 | INFO     | intersect: -38627968012.82482
[2025-12-01 15:53:01] 2025-12-01 15:52:30,374 | INFO     | chi2: 1.5168378994138298
[2025-12-01 15:53:01] 2025-12-01 15:52:30,374 | INFO     | current chi2=1.5168378994138298 (change=48.87448644179537 %)
[2025-12-01 15:53:01] 2025-12-01 15:52:30,374 | INFO     | sum of square deviations: 2263995960.7422824
[2025-12-01 15:53:01] 2025-12-01 15:52:30,374 | INFO     | sum of deviations: 46229440150.97938
[2025-12-01 15:53:01] 2025-12-01 15:52:30,374 | INFO     | mean x: 1764598425.6391752
[2025-12-01 15:53:01] 2025-12-01 15:52:30,374 | INFO     | mean y: 3502184.8711340204
[2025-12-01 15:53:01] 2025-12-01 15:52:30,374 | INFO     | intersect: -36028539710.58028
[2025-12-01 15:53:01] 2025-12-01 15:52:30,374 | INFO     | chi2: 1.5152397659964363
[2025-12-01 15:53:01] 2025-12-01 15:52:30,374 | INFO     | current chi2=1.5152397659964363 (change=0.10535953894685463 %)
[2025-12-01 15:53:01] 2025-12-01 15:52:30,374 | INFO     | left removable region: 20
[2025-12-01 15:53:01] 2025-12-01 15:52:30,374 | INFO     | sum of square deviations: 1605491229.3872848
[2025-12-01 15:53:01] 2025-12-01 15:52:30,375 | INFO     | sum of deviations: 60308997730.18497
[2025-12-01 15:53:01] 2025-12-01 15:52:30,375 | INFO     | mean x: 1764598395.1445086
[2025-12-01 15:53:01] 2025-12-01 15:52:30,375 | INFO     | mean y: 3549882.352601156
[2025-12-01 15:53:01] 2025-12-01 15:52:30,375 | INFO     | intersect: -66282181649.21888
[2025-12-01 15:53:01] 2025-12-01 15:52:30,375 | INFO     | chi2: 0.01344922444578182
[2025-12-01 15:53:01] 2025-12-01 15:52:30,375 | INFO     | current memory leak: 37.56 B/s (using 173 data points, chi2=0.01)
[2025-12-01 15:53:01] 2025-12-01 15:52:30,375 | INFO     | could have reported an average CPU frequency of 3580 MHz (10 samples)
[2025-12-01 15:53:01] 2025-12-01 15:52:30,375 | INFO     | ..............................
[2025-12-01 15:53:01] 2025-12-01 15:52:30,375 | INFO     | . Timing measurements:
[2025-12-01 15:53:01] 2025-12-01 15:52:30,375 | INFO     | . get job = 0 s
[2025-12-01 15:53:01] 2025-12-01 15:52:30,375 | INFO     | . initial setup = 1 s
[2025-12-01 15:53:01] 2025-12-01 15:52:30,375 | INFO     | . payload setup = 1 s
[2025-12-01 15:53:01] 2025-12-01 15:52:30,375 | INFO     | . stage-in = 0 s
[2025-12-01 15:53:01] 2025-12-01 15:52:30,375 | INFO     | . payload execution = 12413 s
[2025-12-01 15:53:01] 2025-12-01 15:52:30,375 | INFO     | . stage-out = 1 s
[2025-12-01 15:53:01] 2025-12-01 15:52:30,375 | INFO     | . log creation = 0 s
[2025-12-01 15:53:01] 2025-12-01 15:52:30,375 | INFO     | ..............................
[2025-12-01 15:53:01] 2025-12-01 15:52:30,400 | INFO     | 
[2025-12-01 15:53:01] 2025-12-01 15:52:30,400 | INFO     | job summary report
[2025-12-01 15:53:01] 2025-12-01 15:52:30,400 | INFO     | --------------------------------------------------
[2025-12-01 15:53:01] 2025-12-01 15:52:30,400 | INFO     | PanDA job id: 6899500570
[2025-12-01 15:53:01] 2025-12-01 15:52:30,400 | INFO     | task id: 47556173
[2025-12-01 15:53:01] 2025-12-01 15:52:30,400 | INFO     | errors: (none)
[2025-12-01 15:53:01] 2025-12-01 15:52:30,400 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 15:53:01] 2025-12-01 15:52:30,400 | INFO     | pilot state: finished 
[2025-12-01 15:53:01] 2025-12-01 15:52:30,400 | INFO     | transexitcode: 0
[2025-12-01 15:53:01] 2025-12-01 15:52:30,400 | INFO     | exeerrorcode: 0
[2025-12-01 15:53:01] 2025-12-01 15:52:30,400 | INFO     | exeerrordiag: 
[2025-12-01 15:53:01] 2025-12-01 15:52:30,400 | INFO     | exitcode: 0
[2025-12-01 15:53:01] 2025-12-01 15:52:30,400 | INFO     | exitmsg: OK
[2025-12-01 15:53:01] 2025-12-01 15:52:30,400 | INFO     | cpuconsumptiontime: 123395 s
[2025-12-01 15:53:01] 2025-12-01 15:52:30,400 | INFO     | nevents: 1000
[2025-12-01 15:53:01] 2025-12-01 15:52:30,401 | INFO     | neventsw: 0
[2025-12-01 15:53:01] 2025-12-01 15:52:30,401 | INFO     | pid: 3957679
[2025-12-01 15:53:01] 2025-12-01 15:52:30,401 | INFO     | pgrp: 3957679
[2025-12-01 15:53:01] 2025-12-01 15:52:30,401 | INFO     | corecount: 12
[2025-12-01 15:53:01] 2025-12-01 15:52:30,401 | INFO     | event service: False
[2025-12-01 15:53:01] 2025-12-01 15:52:30,401 | INFO     | sizes: {0: 2284323, 1: 2284585, 11: 2284613, 12418: 2315581, 12420: 2324589, 12423: 2324645, 12425: 2325019}
[2025-12-01 15:53:01] 2025-12-01 15:52:30,401 | INFO     | --------------------------------------------------
[2025-12-01 15:53:01] 2025-12-01 15:52:30,401 | INFO     | 
[2025-12-01 15:53:01] 2025-12-01 15:52:30,401 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-12-01 15:53:01] 2025-12-01 15:52:30,408 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 15:53:01] 2025-12-01 15:52:30,408 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 15:53:01] 2025-12-01 15:52:30,408 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 15:53:01] 2025-12-01 15:52:30,408 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 15:53:01] 2025-12-01 15:52:30,408 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 15:53:01] 2025-12-01 15:52:30,408 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 15:53:01] 2025-12-01 15:52:30,408 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 15:53:01] 2025-12-01 15:52:30,408 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 15:53:01] 2025-12-01 15:52:30,408 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 15:53:01] 2025-12-01 15:52:30,408 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 15:53:01] 2025-12-01 15:52:30,408 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 15:53:01] 2025-12-01 15:52:30,408 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 15:53:01] 2025-12-01 15:52:30,408 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 15:53:01] 2025-12-01 15:52:30,408 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 15:53:01] 2025-12-01 15:52:30,408 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 15:53:01] 2025-12-01 15:52:30,408 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 15:53:01] 2025-12-01 15:52:30,408 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 15:53:01] 2025-12-01 15:52:30,408 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 15:53:01] 2025-12-01 15:52:30,408 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 15:53:01] 2025-12-01 15:52:30,408 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 15:53:01] 2025-12-01 15:52:30,408 | INFO     | job 6899500570 has completed (purged errors)
[2025-12-01 15:53:01] 2025-12-01 15:52:30,408 | INFO     | overall cleanup function is called
[2025-12-01 15:53:01] 2025-12-01 15:52:31,417 | INFO     | --- collectZombieJob: --- 10, [3957679]
[2025-12-01 15:53:01] 2025-12-01 15:52:31,417 | INFO     | zombie collector waiting for pid 3957679
[2025-12-01 15:53:01] 2025-12-01 15:52:31,417 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 15:53:01] 2025-12-01 15:52:31,417 | INFO     | collected zombie processes
[2025-12-01 15:53:01] 2025-12-01 15:52:31,417 | INFO     | will attempt to kill all subprocesses of pid=3957679
[2025-12-01 15:53:01] 2025-12-01 15:52:31,444 | INFO     | process IDs to be killed: [3957679] (in reverse order)
[2025-12-01 15:53:01] 2025-12-01 15:52:31,460 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 15:53:01] 2025-12-01 15:52:31,460 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 15:53:01] 2025-12-01 15:52:31,461 | INFO     | did not find any defunct processes belonging to 3957679
[2025-12-01 15:53:01] 2025-12-01 15:52:31,462 | INFO     | did not find any defunct processes belonging to 3957679
[2025-12-01 15:53:01] 2025-12-01 15:52:31,463 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 15:53:01] 2025-12-01 15:52:31,463 | INFO     | ready for new job
[2025-12-01 15:53:01] 2025-12-01 15:52:31,463 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 15:53:01] 2025-12-01 15:52:31,463 | INFO     | ***************************************
[2025-12-01 15:53:01] 2025-12-01 15:52:31,463 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 15:53:01] 2025-12-01 15:52:31,463 | INFO     | ***************************************
[2025-12-01 15:53:01] 2025-12-01 15:52:31,464 | INFO     | 
[2025-12-01 15:53:01] 2025-12-01 15:52:31,464 | INFO     | architecture information:
[2025-12-01 15:53:01] 2025-12-01 15:52:31,464 | INFO     | executing command: cat /etc/os-release
[2025-12-01 15:53:01] 2025-12-01 15:52:31,476 | INFO     | cat /etc/os-release:
[2025-12-01 15:53:01] NAME="CentOS Linux"
[2025-12-01 15:53:01] VERSION="7 (Core)"
[2025-12-01 15:53:01] ID="centos"
[2025-12-01 15:53:01] ID_LIKE="rhel fedora"
[2025-12-01 15:53:01] VERSION_ID="7"
[2025-12-01 15:53:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 15:53:01] ANSI_COLOR="0;31"
[2025-12-01 15:53:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 15:53:01] HOME_URL="https://www.centos.org/"
[2025-12-01 15:53:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 15:53:01] 
[2025-12-01 15:53:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 15:53:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 15:53:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 15:53:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 15:53:01] 
[2025-12-01 15:53:01] 2025-12-01 15:52:31,477 | INFO     | ***************************************
[2025-12-01 15:53:01] 2025-12-01 15:52:31,979 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-12-01 15:53:01] 2025-12-01 15:52:31,984 | INFO     | sufficient remaining disk space (277330526208 B)
[2025-12-01 15:53:01] 2025-12-01 15:52:31,985 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 15:53:01] 2025-12-01 15:52:31,985 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 15:53:01] 2025-12-01 15:52:31,985 | INFO     | update_server=False
[2025-12-01 15:53:01] 2025-12-01 15:52:31,985 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 15:53:01] 2025-12-01 15:52:31,985 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 15:53:01] 2025-12-01 15:52:32,301 | INFO     | all data control threads have been joined
[2025-12-01 15:53:01] 2025-12-01 15:52:32,307 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 15:53:01] 2025-12-01 15:52:32,307 | INFO     | aborting loop
[2025-12-01 15:53:01] 2025-12-01 15:52:32,841 | INFO     | all payload control threads have been joined
[2025-12-01 15:53:01] 2025-12-01 15:52:32,989 | INFO     | [job] queue monitor thread has finished
[2025-12-01 15:53:01] 2025-12-01 15:52:32,990 | INFO     | [job] retrieve thread has finished
[2025-12-01 15:53:01] 2025-12-01 15:52:33,306 | INFO     | [data] control thread has finished
[2025-12-01 15:53:01] 2025-12-01 15:52:33,312 | INFO     | [job] job monitor thread has finished
[2025-12-01 15:53:01] 2025-12-01 15:52:33,465 | INFO     | [data] copytool_in thread has finished
[2025-12-01 15:53:01] 2025-12-01 15:52:33,480 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 15:53:01] 2025-12-01 15:52:33,506 | INFO     | [job] validate thread has finished
[2025-12-01 15:53:01] 2025-12-01 15:52:33,567 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 15:53:01] 2025-12-01 15:52:33,574 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 15:53:01] 2025-12-01 15:52:33,655 | INFO     | [monitor] cgroup control has ended
[2025-12-01 15:53:01] 2025-12-01 15:52:33,661 | INFO     | all job control threads have been joined
[2025-12-01 15:53:01] 2025-12-01 15:52:33,686 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 15:53:01] 2025-12-01 15:52:33,846 | INFO     | [payload] control thread has finished
[2025-12-01 15:53:01] 2025-12-01 15:52:34,049 | INFO     | [payload] failed_post thread has finished
[2025-12-01 15:53:01] 2025-12-01 15:52:34,488 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 15:53:01] 2025-12-01 15:52:34,548 | INFO     | [payload] validate_post thread has finished
[2025-12-01 15:53:01] 2025-12-01 15:52:34,666 | INFO     | [job] control thread has finished
[2025-12-01 15:53:01] 2025-12-01 15:52:35,485 | INFO     | [data] copytool_out thread has finished
[2025-12-01 15:53:01] 2025-12-01 15:52:38,494 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 15:53:01] 2025-12-01 15:52:42,697 | INFO     | job.realtimelogging is not enabled
[2025-12-01 15:53:01] 2025-12-01 15:52:43,698 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 15:53:01] 2025-12-01 15:52:45,407 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132859317860160)>', '<ExcThread(monitor, started 132858832217856)>']
[2025-12-01 15:53:01] 2025-12-01 15:52:50,420 | INFO     | all workflow threads have been joined
[2025-12-01 15:53:01] 2025-12-01 15:52:50,420 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 15:53:01] 2025-12-01 15:52:50,420 | INFO     | traces error code: 0
[2025-12-01 15:53:01] 2025-12-01 15:52:50,420 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 15:53:01] 2025-12-01 15:53:01,701 | INFO     | PID=3951123 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-01 15:53:01] 2025-12-01 15:53:01,701 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 15:53:01] 2025-12-01 15:53:01,701 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 15:53:01] 2025-12-01 15:53:01,701 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 15:53:01] 2025-12-01 15:53:01,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 15:53:01] 2025-12-01 15:53:01,701 | INFO     | [monitor] control thread has ended
[2025-12-01 15:53:01] 2025-12-01 15:53:01,741 [wrapper] ==== pilot stdout END ====
[2025-12-01 15:53:01] 2025-12-01 15:53:01,742 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 15:53:01] 2025-12-01 15:53:01,743 [wrapper] pilotpid: 3951123
[2025-12-01 15:53:01] 2025-12-01 15:53:01,744 [wrapper] Pilot exit status: 0
[2025-12-01 15:53:01] 2025-12-01 15:53:01,747 [wrapper] pandaids: 6899500570
[2025-12-01 15:53:01] 2025-12-01 15:53:01,756 [wrapper] cleanup supervisor_pilot 4040828 3951124
[2025-12-01 15:53:01] 2025-12-01 15:53:01,757 [wrapper] Test setup, not cleaning
[2025-12-01 15:53:01] 2025-12-01 15:53:01,758 [wrapper] apfmon messages muted
[2025-12-01 15:53:01] 2025-12-01 15:53:01,758 [wrapper] ==== wrapper stdout END ====
[2025-12-01 15:53:01] 2025-12-01 15:53:01,759 [wrapper] ==== wrapper stderr END ====
[2025-12-01 15:53:01]  *** Error codes and diagnostics ***
[2025-12-01 15:53:01]     "exeErrorCode": 0,
[2025-12-01 15:53:01]     "exeErrorDiag": "",
[2025-12-01 15:53:01]     "pilotErrorCode": 0,
[2025-12-01 15:53:01]     "pilotErrorDiag": "",
[2025-12-01 15:53:01]  *** Listing of results directory ***
[2025-12-01 15:53:01] total 1293008
[2025-12-01 15:53:01] -rw-r--r-- 1 boinc boinc    598293 Nov  6 08:41 pilot3.tar.gz
[2025-12-01 15:53:01] -rwx------ 1 boinc boinc     36292 Nov 27 08:47 runpilot2-wrapper.sh
[2025-12-01 15:53:01] -rw-r--r-- 1 boinc boinc      5112 Nov 27 08:48 queuedata.json
[2025-12-01 15:53:01] -rw-r--r-- 1 boinc boinc       100 Dec  1 12:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 15:53:01] -rwxr-xr-x 1 boinc boinc      7986 Dec  1 12:25 run_atlas
[2025-12-01 15:53:01] -rw-r--r-- 1 boinc boinc       105 Dec  1 12:25 job.xml
[2025-12-01 15:53:01] -rw-r--r-- 1 boinc boinc      9907 Dec  1 12:25 init_data.xml
[2025-12-01 15:53:01] -rw-r--r-- 2 boinc boinc 407911563 Dec  1 12:25 EVNT.47483658._003365.pool.root.1
[2025-12-01 15:53:01] -rw-r--r-- 2 boinc boinc     15847 Dec  1 12:25 start_atlas.sh
[2025-12-01 15:53:01] drwxrwx--x 2 boinc boinc      4096 Dec  1 12:25 shared
[2025-12-01 15:53:01] -rw-r--r-- 2 boinc boinc    611286 Dec  1 12:25 input.tar.gz
[2025-12-01 15:53:01] -rw-r--r-- 1 boinc boinc         0 Dec  1 12:25 boinc_lockfile
[2025-12-01 15:53:01] -rw-r--r-- 1 boinc boinc      2787 Dec  1 12:25 pandaJob.out
[2025-12-01 15:53:01] -rw------- 1 boinc boinc    992117 Dec  1 12:25 agis_schedconf.cvmfs.json
[2025-12-01 15:53:01] drwx------ 7 boinc boinc      4096 Dec  1 12:25 pilot3
[2025-12-01 15:53:01] -rw-r--r-- 1 boinc boinc       532 Dec  1 15:48 boinc_task_state.xml
[2025-12-01 15:53:01] -rw------- 1 boinc boinc 904709793 Dec  1 15:52 HITS.47556173._003215.pool.root.1
[2025-12-01 15:53:01] -rw------- 1 boinc boinc        95 Dec  1 15:52 pilot_heartbeat.json
[2025-12-01 15:53:01] -rw------- 1 boinc boinc      1058 Dec  1 15:52 memory_monitor_summary.json
[2025-12-01 15:53:01] -rw------- 1 boinc boinc   1516240 Dec  1 15:52 agis_ddmendpoints.agis.ALL.json
[2025-12-01 15:53:01] -rw------- 1 boinc boinc   1940496 Dec  1 15:52 log.47556173._003215.job.log.tgz.1
[2025-12-01 15:53:01] -rw------- 1 boinc boinc      8603 Dec  1 15:52 heartbeat.json
[2025-12-01 15:53:01] -rw-r--r-- 1 boinc boinc        29 Dec  1 15:52 wrapper_checkpoint.txt
[2025-12-01 15:53:01] -rw-r--r-- 1 boinc boinc      8192 Dec  1 15:52 boinc_mmap_file
[2025-12-01 15:53:01] -rw------- 1 boinc boinc       747 Dec  1 15:53 pilotlog.txt
[2025-12-01 15:53:01] -rw------- 1 boinc boinc   1787178 Dec  1 15:53 log.47556173._003215.job.log.1
[2025-12-01 15:53:01] -rw------- 1 boinc boinc       353 Dec  1 15:53 output.list
[2025-12-01 15:53:01] -rw-r--r-- 1 boinc boinc       620 Dec  1 15:53 runtime_log
[2025-12-01 15:53:01] -rw------- 1 boinc boinc   3747840 Dec  1 15:53 result.tar.gz
[2025-12-01 15:53:01] -rw-r--r-- 1 boinc boinc      9048 Dec  1 15:53 runtime_log.err
[2025-12-01 15:53:01] -rw------- 1 boinc boinc       660 Dec  1 15:53 DH3LDmtpmi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEcKKDm3qpJ6n.diag
[2025-12-01 15:53:01] -rw-r--r-- 1 boinc boinc     21584 Dec  1 15:53 stderr.txt
[2025-12-01 15:53:01] HITS file was successfully produced:
[2025-12-01 15:53:01] -rw------- 1 boinc boinc 904709793 Dec  1 15:52 shared/HITS.pool.root.1
[2025-12-01 15:53:01]  *** Contents of shared directory: ***
[2025-12-01 15:53:01] total 1286144
[2025-12-01 15:53:01] -rw-r--r-- 2 boinc boinc 407911563 Dec  1 12:25 ATLAS.root_0
[2025-12-01 15:53:01] -rw-r--r-- 2 boinc boinc     15847 Dec  1 12:25 start_atlas.sh
[2025-12-01 15:53:01] -rw-r--r-- 2 boinc boinc    611286 Dec  1 12:25 input.tar.gz
[2025-12-01 15:53:01] -rw------- 1 boinc boinc 904709793 Dec  1 15:52 HITS.pool.root.1
[2025-12-01 15:53:01] -rw------- 1 boinc boinc   3747840 Dec  1 15:53 result.tar.gz
15:53:03 (3947383): run_atlas exited; CPU time 123089.853341
15:53:03 (3947383): called boinc_finish(0)

</stderr_txt>
]]>

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