Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:29:11 (6676): wrapper (7.7.26015): starting
01:29:11 (6676): wrapper: running run_atlas (--nthreads 8)
[2025-12-01 01:29:11] Arguments: --nthreads 8
[2025-12-01 01:29:11] Threads: 8
[2025-12-01 01:29:11] Checking for CVMFS
[2025-12-01 01:29:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 01:29:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 01:29:11] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 01:29:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 01:29:11] 2.11.2.0 6491 15788 81628 153508 3 68 13121664 18432000 1831 130560 0 13940013 99.992 573920 22713 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-01 01:29:11] CVMFS is ok
[2025-12-01 01:29:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 01:29:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 01:29:11] Further information can be found at the LHC@home message board.
[2025-12-01 01:29:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 01:29:11] Checking for apptainer binary...
[2025-12-01 01:29:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 01:29:11] Running /usr/bin/apptainer --version
[2025-12-01 01:29:11] apptainer version 1.3.2-1.el7
[2025-12-01 01:29:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 01:29:12] c-206-29.aglt2.org
[2025-12-01 01:29:12] apptainer works
[2025-12-01 01:29:12] Set ATHENA_PROC_NUMBER=8
[2025-12-01 01:29:12] Set ATHENA_CORE_NUMBER=8
[2025-12-01 01:29:12] Starting ATLAS job with PandaID=6895351020
[2025-12-01 01:29:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 20:49:49]  *** The last 200 lines of the pilot log: ***
[2025-12-01 20:49:49] 2025-12-02 01:49:15,231 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-01 20:49:49] 2025-12-02 01:49:16,033 | INFO     | time since job start (69593s) is within the limit (172800.0s)
[2025-12-01 20:49:49] 2025-12-02 01:49:16,212 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-01 20:49:49] 2025-12-02 01:49:16,217 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2477.9166666666665
[2025-12-01 20:49:49] 2025-12-02 01:49:16,220 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895351020/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 20:49:49] 2025-12-02 01:49:16,221 | INFO     | extracted standard info from prmon json
[2025-12-01 20:49:49] 2025-12-02 01:49:16,221 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 20:49:49] 2025-12-02 01:49:16,221 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 20:49:49] 2025-12-02 01:49:16,236 | INFO     | fitting pss+swap vs Time
[2025-12-01 20:49:49] 2025-12-02 01:49:16,237 | INFO     | sum of square deviations: 460612395332.86664
[2025-12-01 20:49:49] 2025-12-02 01:49:16,261 | INFO     | sum of deviations: 2191595295626.5852
[2025-12-01 20:49:49] 2025-12-02 01:49:16,261 | INFO     | mean x: 1764605359.6520596
[2025-12-01 20:49:49] 2025-12-02 01:49:16,262 | INFO     | mean y: 2871544.7949167397
[2025-12-01 20:49:49] 2025-12-02 01:49:16,262 | INFO     | intersect: -8393126574.309464
[2025-12-01 20:49:49] 2025-12-02 01:49:16,263 | INFO     | chi2: 5.7013260744324645
[2025-12-01 20:49:49] 2025-12-02 01:49:16,264 | INFO     | sum of square deviations: 454583746420.7325
[2025-12-01 20:49:49] 2025-12-02 01:49:16,304 | INFO     | sum of deviations: 2553075850874.1533
[2025-12-01 20:49:49] 2025-12-02 01:49:16,305 | INFO     | mean x: 1764605207.1549296
[2025-12-01 20:49:49] 2025-12-02 01:49:16,305 | INFO     | mean y: 2880684.811619718
[2025-12-01 20:49:49] 2025-12-02 01:49:16,305 | INFO     | intersect: -9907660499.70391
[2025-12-01 20:49:49] 2025-12-02 01:49:16,307 | INFO     | chi2: 2.7649966398917867
[2025-12-01 20:49:49] 2025-12-02 01:49:16,307 | INFO     | current chi2=2.7649966398917867 (change=51.50256968652636 %)
[2025-12-01 20:49:49] 2025-12-02 01:49:16,309 | INFO     | sum of square deviations: 448607935708.57904
[2025-12-01 20:49:49] 2025-12-02 01:49:16,351 | INFO     | sum of deviations: 2673870323578.633
[2025-12-01 20:49:49] 2025-12-02 01:49:16,352 | INFO     | mean x: 1764605054.657825
[2025-12-01 20:49:49] 2025-12-02 01:49:16,352 | INFO     | mean y: 2883763.9628647217
[2025-12-01 20:49:49] 2025-12-02 01:49:16,352 | INFO     | intersect: -10514819363.6775
[2025-12-01 20:49:49] 2025-12-02 01:49:16,353 | INFO     | chi2: 2.2887921208050743
[2025-12-01 20:49:49] 2025-12-02 01:49:16,354 | INFO     | current chi2=2.2887921208050743 (change=17.222607514826834 %)
[2025-12-01 20:49:49] 2025-12-02 01:49:16,354 | INFO     | right removable region: 1130
[2025-12-01 20:49:49] 2025-12-02 01:49:16,356 | INFO     | sum of square deviations: 454583292580.7324
[2025-12-01 20:49:49] 2025-12-02 01:49:16,398 | INFO     | sum of deviations: 1895866601895.6057
[2025-12-01 20:49:49] 2025-12-02 01:49:16,398 | INFO     | mean x: 1764605512.1549296
[2025-12-01 20:49:49] 2025-12-02 01:49:16,399 | INFO     | mean y: 2879016.4454225353
[2025-12-01 20:49:49] 2025-12-02 01:49:16,399 | INFO     | intersect: -7356513003.9317465
[2025-12-01 20:49:49] 2025-12-02 01:49:16,400 | INFO     | chi2: 3.6651492255511897
[2025-12-01 20:49:49] 2025-12-02 01:49:16,401 | INFO     | current chi2=3.6651492255511897 (change=35.714092165548784 %)
[2025-12-01 20:49:49] 2025-12-02 01:49:16,402 | INFO     | sum of square deviations: 448607305457.8276
[2025-12-01 20:49:49] 2025-12-02 01:49:16,445 | INFO     | sum of deviations: 1822899652912.794
[2025-12-01 20:49:49] 2025-12-02 01:49:16,445 | INFO     | mean x: 1764605664.6542883
[2025-12-01 20:49:49] 2025-12-02 01:49:16,445 | INFO     | mean y: 2880878.175950486
[2025-12-01 20:49:49] 2025-12-02 01:49:16,446 | INFO     | intersect: -7167530781.401105
[2025-12-01 20:49:49] 2025-12-02 01:49:16,447 | INFO     | chi2: 3.6190478462947158
[2025-12-01 20:49:49] 2025-12-02 01:49:16,447 | INFO     | current chi2=3.6190478462947158 (change=1.2578308936259184 %)
[2025-12-01 20:49:49] 2025-12-02 01:49:16,448 | INFO     | left removable region: 20
[2025-12-01 20:49:49] 2025-12-02 01:49:16,449 | INFO     | sum of square deviations: 424080148236.1342
[2025-12-01 20:49:49] 2025-12-02 01:49:16,490 | INFO     | sum of deviations: 2211576639008.0
[2025-12-01 20:49:49] 2025-12-02 01:49:16,490 | INFO     | mean x: 1764605634.1612613
[2025-12-01 20:49:49] 2025-12-02 01:49:16,490 | INFO     | mean y: 2895817.944144144
[2025-12-01 20:49:49] 2025-12-02 01:49:16,490 | INFO     | intersect: -9199517013.226482
[2025-12-01 20:49:49] 2025-12-02 01:49:16,492 | INFO     | chi2: 0.17210263842423001
[2025-12-01 20:49:49] 2025-12-02 01:49:16,492 | INFO     | current memory leak: 5.21 B/s (using 1110 data points, chi2=0.17)
[2025-12-01 20:49:49] 2025-12-02 01:49:16,493 | INFO     | could have reported an average CPU frequency of 2624 MHz (41 samples)
[2025-12-01 20:49:49] 2025-12-02 01:49:16,494 | INFO     | ..............................
[2025-12-01 20:49:49] 2025-12-02 01:49:16,494 | INFO     | . Timing measurements:
[2025-12-01 20:49:49] 2025-12-02 01:49:16,494 | INFO     | . get job = 0 s
[2025-12-01 20:49:49] 2025-12-02 01:49:16,494 | INFO     | . initial setup = 2 s
[2025-12-01 20:49:49] 2025-12-02 01:49:16,494 | INFO     | . payload setup = 5 s
[2025-12-01 20:49:49] 2025-12-02 01:49:16,495 | INFO     | . stage-in = 0 s
[2025-12-01 20:49:49] 2025-12-02 01:49:16,495 | INFO     | . payload execution = 69558 s
[2025-12-01 20:49:49] 2025-12-02 01:49:16,495 | INFO     | . stage-out = 3 s
[2025-12-01 20:49:49] 2025-12-02 01:49:16,495 | INFO     | . log creation = 0 s
[2025-12-01 20:49:49] 2025-12-02 01:49:16,495 | INFO     | ..............................
[2025-12-01 20:49:49] 2025-12-02 01:49:16,616 | INFO     | 
[2025-12-01 20:49:49] 2025-12-02 01:49:16,616 | INFO     | job summary report
[2025-12-01 20:49:49] 2025-12-02 01:49:16,617 | INFO     | --------------------------------------------------
[2025-12-01 20:49:49] 2025-12-02 01:49:16,617 | INFO     | PanDA job id: 6895351020
[2025-12-01 20:49:49] 2025-12-02 01:49:16,617 | INFO     | task id: 47556137
[2025-12-01 20:49:49] 2025-12-02 01:49:16,617 | INFO     | errors: (none)
[2025-12-01 20:49:49] 2025-12-02 01:49:16,617 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 20:49:49] 2025-12-02 01:49:16,617 | INFO     | pilot state: finished 
[2025-12-01 20:49:49] 2025-12-02 01:49:16,617 | INFO     | transexitcode: 0
[2025-12-01 20:49:49] 2025-12-02 01:49:16,617 | INFO     | exeerrorcode: 0
[2025-12-01 20:49:49] 2025-12-02 01:49:16,617 | INFO     | exeerrordiag: 
[2025-12-01 20:49:49] 2025-12-02 01:49:16,618 | INFO     | exitcode: 0
[2025-12-01 20:49:49] 2025-12-02 01:49:16,618 | INFO     | exitmsg: OK
[2025-12-01 20:49:49] 2025-12-02 01:49:16,618 | INFO     | cpuconsumptiontime: 540019 s
[2025-12-01 20:49:49] 2025-12-02 01:49:16,618 | INFO     | nevents: 1000
[2025-12-01 20:49:49] 2025-12-02 01:49:16,618 | INFO     | neventsw: 0
[2025-12-01 20:49:49] 2025-12-02 01:49:16,618 | INFO     | pid: 16803
[2025-12-01 20:49:49] 2025-12-02 01:49:16,618 | INFO     | pgrp: 16803
[2025-12-01 20:49:49] 2025-12-02 01:49:16,618 | INFO     | corecount: 8
[2025-12-01 20:49:49] 2025-12-02 01:49:16,618 | INFO     | event service: False
[2025-12-01 20:49:49] 2025-12-02 01:49:16,618 | INFO     | sizes: {0: 2284092, 1: 2284291, 4: 2284553, 12: 2284581, 69568: 2340839, 69572: 2349833, 69573: 2350017, 69578: 2350359}
[2025-12-01 20:49:49] 2025-12-02 01:49:16,619 | INFO     | --------------------------------------------------
[2025-12-01 20:49:49] 2025-12-02 01:49:16,619 | INFO     | 
[2025-12-01 20:49:49] 2025-12-02 01:49:16,619 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-01 20:49:49] 2025-12-02 01:49:16,639 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 20:49:49] 2025-12-02 01:49:16,640 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 20:49:49] 2025-12-02 01:49:16,640 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 20:49:49] 2025-12-02 01:49:16,640 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 20:49:49] 2025-12-02 01:49:16,640 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 20:49:49] 2025-12-02 01:49:16,640 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 20:49:49] 2025-12-02 01:49:16,641 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 20:49:49] 2025-12-02 01:49:16,641 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 20:49:49] 2025-12-02 01:49:16,641 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 20:49:49] 2025-12-02 01:49:16,641 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 20:49:49] 2025-12-02 01:49:16,641 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 20:49:49] 2025-12-02 01:49:16,641 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 20:49:49] 2025-12-02 01:49:16,642 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 20:49:49] 2025-12-02 01:49:16,642 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 20:49:49] 2025-12-02 01:49:16,642 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 20:49:49] 2025-12-02 01:49:16,642 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 20:49:49] 2025-12-02 01:49:16,642 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 20:49:49] 2025-12-02 01:49:16,642 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 20:49:49] 2025-12-02 01:49:16,643 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 20:49:49] 2025-12-02 01:49:16,643 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 20:49:49] 2025-12-02 01:49:16,643 | INFO     | job 6895351020 has completed (purged errors)
[2025-12-01 20:49:49] 2025-12-02 01:49:16,643 | INFO     | overall cleanup function is called
[2025-12-01 20:49:49] 2025-12-02 01:49:17,660 | INFO     | --- collectZombieJob: --- 10, [16803]
[2025-12-01 20:49:49] 2025-12-02 01:49:17,660 | INFO     | zombie collector waiting for pid 16803
[2025-12-01 20:49:49] 2025-12-02 01:49:17,660 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 20:49:49] 2025-12-02 01:49:17,660 | INFO     | collected zombie processes
[2025-12-01 20:49:49] 2025-12-02 01:49:17,661 | INFO     | will attempt to kill all subprocesses of pid=16803
[2025-12-01 20:49:49] 2025-12-02 01:49:17,837 | INFO     | process IDs to be killed: [16803] (in reverse order)
[2025-12-01 20:49:49] 2025-12-02 01:49:17,898 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 20:49:49] 2025-12-02 01:49:17,898 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 20:49:49] 2025-12-02 01:49:17,904 | INFO     | did not find any defunct processes belonging to 16803
[2025-12-01 20:49:49] 2025-12-02 01:49:17,909 | INFO     | did not find any defunct processes belonging to 16803
[2025-12-01 20:49:49] 2025-12-02 01:49:17,911 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 20:49:49] 2025-12-02 01:49:17,911 | INFO     | ready for new job
[2025-12-01 20:49:49] 2025-12-02 01:49:17,912 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 20:49:49] 2025-12-02 01:49:17,916 | INFO     | ***************************************
[2025-12-01 20:49:49] 2025-12-02 01:49:17,917 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 20:49:49] 2025-12-02 01:49:17,917 | INFO     | ***************************************
[2025-12-01 20:49:49] 2025-12-02 01:49:17,917 | INFO     | 
[2025-12-01 20:49:49] 2025-12-02 01:49:17,918 | INFO     | architecture information:
[2025-12-01 20:49:49] 2025-12-02 01:49:17,919 | INFO     | executing command: cat /etc/os-release
[2025-12-01 20:49:49] 2025-12-02 01:49:17,929 | INFO     | cat /etc/os-release:
[2025-12-01 20:49:49] NAME="CentOS Linux"
[2025-12-01 20:49:49] VERSION="7 (Core)"
[2025-12-01 20:49:49] ID="centos"
[2025-12-01 20:49:49] ID_LIKE="rhel fedora"
[2025-12-01 20:49:49] VERSION_ID="7"
[2025-12-01 20:49:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 20:49:49] ANSI_COLOR="0;31"
[2025-12-01 20:49:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 20:49:49] HOME_URL="https://www.centos.org/"
[2025-12-01 20:49:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 20:49:49] 
[2025-12-01 20:49:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 20:49:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 20:49:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 20:49:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 20:49:49] 
[2025-12-01 20:49:49] 2025-12-02 01:49:17,929 | INFO     | ***************************************
[2025-12-01 20:49:49] 2025-12-02 01:49:18,432 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-01 20:49:49] 2025-12-02 01:49:18,448 | INFO     | sufficient remaining disk space (25157435392 B)
[2025-12-01 20:49:49] 2025-12-02 01:49:18,448 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 20:49:49] 2025-12-02 01:49:18,448 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 20:49:49] 2025-12-02 01:49:18,448 | INFO     | update_server=False
[2025-12-01 20:49:49] 2025-12-02 01:49:18,449 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 20:49:49] 2025-12-02 01:49:18,449 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 20:49:49] 2025-12-02 01:49:18,449 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 20:49:49] 2025-12-02 01:49:18,531 | INFO     | all data control threads have been joined
[2025-12-01 20:49:49] 2025-12-02 01:49:18,618 | INFO     | [monitor] cgroup control has ended
[2025-12-01 20:49:49] 2025-12-02 01:49:18,745 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 20:49:49] 2025-12-02 01:49:18,746 | INFO     | aborting loop
[2025-12-01 20:49:49] 2025-12-02 01:49:18,906 | INFO     | all payload control threads have been joined
[2025-12-01 20:49:49] 2025-12-02 01:49:19,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 20:49:49] 2025-12-02 01:49:19,455 | INFO     | [job] retrieve thread has finished
[2025-12-01 20:49:49] 2025-12-02 01:49:19,455 | INFO     | [job] queue monitor thread has finished
[2025-12-01 20:49:49] 2025-12-02 01:49:19,537 | INFO     | [data] control thread has finished
[2025-12-01 20:49:49] 2025-12-02 01:49:19,632 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 20:49:49] 2025-12-02 01:49:19,721 | INFO     | all job control threads have been joined
[2025-12-01 20:49:49] 2025-12-02 01:49:19,752 | INFO     | [job] job monitor thread has finished
[2025-12-01 20:49:49] 2025-12-02 01:49:19,912 | INFO     | [payload] control thread has finished
[2025-12-01 20:49:49] 2025-12-02 01:49:20,328 | INFO     | [payload] failed_post thread has finished
[2025-12-01 20:49:49] 2025-12-02 01:49:20,717 | INFO     | [payload] validate_post thread has finished
[2025-12-01 20:49:49] 2025-12-02 01:49:20,727 | INFO     | [job] control thread has finished
[2025-12-01 20:49:49] 2025-12-02 01:49:20,843 | INFO     | [data] copytool_in thread has finished
[2025-12-01 20:49:49] 2025-12-02 01:49:20,873 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 20:49:49] 2025-12-02 01:49:20,875 | INFO     | [job] validate thread has finished
[2025-12-01 20:49:49] 2025-12-02 01:49:20,877 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 20:49:49] 2025-12-02 01:49:21,038 | INFO     | [data] copytool_out thread has finished
[2025-12-01 20:49:49] 2025-12-02 01:49:22,455 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 20:49:49] 2025-12-02 01:49:28,746 | INFO     | job.realtimelogging is not enabled
[2025-12-01 20:49:49] 2025-12-02 01:49:29,752 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 20:49:49] 2025-12-02 01:49:31,509 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140047522789184)>', '<ExcThread(monitor, started 140047223330560)>']
[2025-12-01 20:49:49] 2025-12-02 01:49:36,534 | INFO     | all workflow threads have been joined
[2025-12-01 20:49:49] 2025-12-02 01:49:36,534 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 20:49:49] 2025-12-02 01:49:36,534 | INFO     | traces error code: 0
[2025-12-01 20:49:49] 2025-12-02 01:49:36,535 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 20:49:49] 2025-12-02 01:49:49,256 | INFO     | PID=10373 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-01 20:49:49] 2025-12-02 01:49:49,256 | INFO     | .. there are 3 such processes running
[2025-12-01 20:49:49] 2025-12-02 01:49:49,257 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 20:49:49] 2025-12-02 01:49:49,257 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 20:49:49] 2025-12-02 01:49:49,257 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 20:49:49] 2025-12-02 01:49:49,257 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 20:49:49] 2025-12-02 01:49:49,258 | INFO     | [monitor] control thread has ended
[2025-12-01 20:49:49] 2025-12-02 01:49:49,364 [wrapper] ==== pilot stdout END ====
[2025-12-01 20:49:49] 2025-12-02 01:49:49,370 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 20:49:49] 2025-12-02 01:49:49,372 [wrapper] pilotpid: 10373
[2025-12-01 20:49:49] 2025-12-02 01:49:49,374 [wrapper] Pilot exit status: 0
[2025-12-01 20:49:49] 2025-12-02 01:49:49,382 [wrapper] pandaids: 6895351020
[2025-12-01 20:49:49] 2025-12-02 01:49:49,409 [wrapper] cleanup supervisor_pilot 13487 10374
[2025-12-01 20:49:49] 2025-12-02 01:49:49,412 [wrapper] Test setup, not cleaning
[2025-12-01 20:49:49] 2025-12-02 01:49:49,414 [wrapper] apfmon messages muted
[2025-12-01 20:49:49] 2025-12-02 01:49:49,417 [wrapper] ==== wrapper stdout END ====
[2025-12-01 20:49:49] 2025-12-02 01:49:49,419 [wrapper] ==== wrapper stderr END ====
[2025-12-01 20:49:49]  *** Error codes and diagnostics ***
[2025-12-01 20:49:49]     "exeErrorCode": 0,
[2025-12-01 20:49:49]     "exeErrorDiag": "",
[2025-12-01 20:49:49]     "pilotErrorCode": 0,
[2025-12-01 20:49:49]     "pilotErrorDiag": "",
[2025-12-01 20:49:49]  *** Listing of results directory ***
[2025-12-01 20:49:49] total 1315984
[2025-12-01 20:49:49] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 17:51 pilot3.tar.gz
[2025-12-01 20:49:49] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 17:56 queuedata.json
[2025-12-01 20:49:49] -rwx------ 1 boincer umatlas     36292 Nov 22 17:57 runpilot2-wrapper.sh
[2025-12-01 20:49:49] -rw-r--r-- 1 boincer umatlas       100 Dec  1 01:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 20:49:49] -rwxr-xr-x 1 boincer umatlas      7986 Dec  1 01:29 run_atlas
[2025-12-01 20:49:49] -rw-r--r-- 1 boincer umatlas       105 Dec  1 01:29 job.xml
[2025-12-01 20:49:49] -rw-r--r-- 2 boincer umatlas 407379611 Dec  1 01:29 EVNT.47483658._000534.pool.root.1
[2025-12-01 20:49:49] -rw-r--r-- 2 boincer umatlas     15847 Dec  1 01:29 start_atlas.sh
[2025-12-01 20:49:49] drwxrwx--x 2 boincer umatlas      4096 Dec  1 01:29 shared
[2025-12-01 20:49:49] -rw-r--r-- 2 boincer umatlas    590097 Dec  1 01:29 input.tar.gz
[2025-12-01 20:49:49] -rw-r--r-- 1 boincer umatlas         0 Dec  1 01:29 boinc_lockfile
[2025-12-01 20:49:49] -rw-r--r-- 1 boincer umatlas      2784 Dec  1 01:29 pandaJob.out
[2025-12-01 20:49:49] -rw------- 1 boincer umatlas        57 Dec  1 01:29 setup.sh.local
[2025-12-01 20:49:49] -rw------- 1 boincer umatlas    992513 Dec  1 01:29 agis_schedconf.cvmfs.json
[2025-12-01 20:49:49] drwx------ 5 boincer umatlas      4096 Dec  1 01:29 pilot3
[2025-12-01 20:49:49] -rw-r--r-- 1 boincer umatlas       533 Dec  1 20:38 boinc_task_state.xml
[2025-12-01 20:49:49] -rw-r--r-- 1 boincer umatlas      5954 Dec  1 20:45 init_data.xml
[2025-12-01 20:49:49] -rw------- 1 boincer umatlas 912446802 Dec  1 20:48 HITS.47556137._005297.pool.root.1
[2025-12-01 20:49:49] -rw------- 1 boincer umatlas      1068 Dec  1 20:49 memory_monitor_summary.json
[2025-12-01 20:49:49] -rw------- 1 boincer umatlas   1516240 Dec  1 20:49 agis_ddmendpoints.agis.ALL.json
[2025-12-01 20:49:49] -rw------- 1 boincer umatlas   2304407 Dec  1 20:49 log.47556137._005297.job.log.tgz.1
[2025-12-01 20:49:49] -rw------- 1 boincer umatlas      8664 Dec  1 20:49 heartbeat.json
[2025-12-01 20:49:49] -rw-r--r-- 1 boincer umatlas      8192 Dec  1 20:49 boinc_mmap_file
[2025-12-01 20:49:49] -rw-r--r-- 1 boincer umatlas        29 Dec  1 20:49 wrapper_checkpoint.txt
[2025-12-01 20:49:49] -rw------- 1 boincer umatlas        95 Dec  1 20:49 pilot_heartbeat.json
[2025-12-01 20:49:49] -rw------- 1 boincer umatlas       820 Dec  1 20:49 pilotlog.txt
[2025-12-01 20:49:49] -rw------- 1 boincer umatlas   9610673 Dec  1 20:49 log.47556137._005297.job.log.1
[2025-12-01 20:49:49] -rw------- 1 boincer umatlas       353 Dec  1 20:49 output.list
[2025-12-01 20:49:49] -rw-r--r-- 1 boincer umatlas       620 Dec  1 20:49 runtime_log
[2025-12-01 20:49:49] -rw------- 1 boincer umatlas  11929600 Dec  1 20:49 result.tar.gz
[2025-12-01 20:49:49] -rw-r--r-- 1 boincer umatlas      9343 Dec  1 20:49 runtime_log.err
[2025-12-01 20:49:49] -rw------- 1 boincer umatlas       668 Dec  1 20:49 F1tKDmCjBh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfRKKDmVkTrUm.diag
[2025-12-01 20:49:49] -rw-r--r-- 1 boincer umatlas     21282 Dec  1 20:49 stderr.txt
[2025-12-01 20:49:49] HITS file was successfully produced:
[2025-12-01 20:49:49] -rw------- 1 boincer umatlas 912446802 Dec  1 20:48 shared/HITS.pool.root.1
[2025-12-01 20:49:49]  *** Contents of shared directory: ***
[2025-12-01 20:49:49] total 1301148
[2025-12-01 20:49:49] -rw-r--r-- 2 boincer umatlas 407379611 Dec  1 01:29 ATLAS.root_0
[2025-12-01 20:49:49] -rw-r--r-- 2 boincer umatlas     15847 Dec  1 01:29 start_atlas.sh
[2025-12-01 20:49:49] -rw-r--r-- 2 boincer umatlas    590097 Dec  1 01:29 input.tar.gz
[2025-12-01 20:49:49] -rw------- 1 boincer umatlas 912446802 Dec  1 20:48 HITS.pool.root.1
[2025-12-01 20:49:49] -rw------- 1 boincer umatlas  11929600 Dec  1 20:49 result.tar.gz
20:49:51 (6676): run_atlas exited; CPU time 539038.283195
20:49:51 (6676): called boinc_finish(0)

</stderr_txt>
]]>

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