Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:14:03 (2105047): wrapper (7.7.26015): starting
00:14:03 (2105047): wrapper: running run_atlas (--nthreads 8)
[2025-12-01 00:14:03] Arguments: --nthreads 8
[2025-12-01 00:14:03] Threads: 8
[2025-12-01 00:14:03] Checking for CVMFS
[2025-12-01 00:14:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 00:14:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 00:14:04] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 00:14:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 00:14:05] 2.13.2.0 8058 42604 280788 153506 2 142 37323479 40960001 13445 16776704 0 49633263 99.722 36102554 37027 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-01 00:14:05] CVMFS is ok
[2025-12-01 00:14:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 00:14:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 00:14:05] Further information can be found at the LHC@home message board.
[2025-12-01 00:14:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 00:14:05] Checking for apptainer binary...
[2025-12-01 00:14:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 00:14:05] Running /usr/bin/apptainer --version
[2025-12-01 00:14:06] apptainer version 1.4.4-1.el9
[2025-12-01 00:14:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 00:14:06] c-210-33-3.aglt2.org
[2025-12-01 00:14:06] apptainer works
[2025-12-01 00:14:06] Set ATHENA_PROC_NUMBER=8
[2025-12-01 00:14:06] Set ATHENA_CORE_NUMBER=8
[2025-12-01 00:14:06] Starting ATLAS job with PandaID=6900297501
[2025-12-01 00:14:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 22:52:03]  *** The last 200 lines of the pilot log: ***
[2025-12-02 22:52:03] 2025-12-03 03:51:26,710 | INFO     | sum of deviations: 16908997435883.367
[2025-12-02 22:52:03] 2025-12-03 03:51:26,711 | INFO     | mean x: 1764650063.9395704
[2025-12-02 22:52:03] 2025-12-03 03:51:26,711 | INFO     | mean y: 2878488.917728431
[2025-12-02 22:52:03] 2025-12-03 03:51:26,711 | INFO     | intersect: -4639190659.19096
[2025-12-02 22:52:03] 2025-12-03 03:51:26,718 | INFO     | chi2: 11.206543006569698
[2025-12-02 22:52:03] 2025-12-03 03:51:26,725 | INFO     | sum of square deviations: 6392804845619.1875
[2025-12-02 22:52:03] 2025-12-03 03:51:26,877 | INFO     | sum of deviations: 17793551667655.945
[2025-12-02 22:52:03] 2025-12-03 03:51:26,877 | INFO     | mean x: 1764649911.4449308
[2025-12-02 22:52:03] 2025-12-03 03:51:26,877 | INFO     | mean y: 2882339.0492341355
[2025-12-02 22:52:03] 2025-12-03 03:51:26,877 | INFO     | intersect: -4908794168.037791
[2025-12-02 22:52:03] 2025-12-03 03:51:26,880 | INFO     | chi2: 8.297116769734213
[2025-12-02 22:52:03] 2025-12-03 03:51:26,880 | INFO     | current chi2=8.297116769734213 (change=25.961853134636335 %)
[2025-12-02 22:52:03] 2025-12-03 03:51:26,883 | INFO     | sum of square deviations: 6357900151816.138
[2025-12-02 22:52:03] 2025-12-03 03:51:27,010 | INFO     | sum of deviations: 18500908734246.367
[2025-12-02 22:52:03] 2025-12-03 03:51:27,012 | INFO     | mean x: 1764649758.9499452
[2025-12-02 22:52:03] 2025-12-03 03:51:27,012 | INFO     | mean y: 2885428.3529411764
[2025-12-02 22:52:03] 2025-12-03 03:51:27,012 | INFO     | intersect: -5132084193.483126
[2025-12-02 22:52:03] 2025-12-03 03:51:27,015 | INFO     | chi2: 6.201425954297153
[2025-12-02 22:52:03] 2025-12-03 03:51:27,015 | INFO     | current chi2=6.201425954297153 (change=25.258061005982356 %)
[2025-12-02 22:52:03] 2025-12-03 03:51:27,018 | INFO     | sum of square deviations: 6323122428697.278
[2025-12-02 22:52:03] 2025-12-03 03:51:27,145 | INFO     | sum of deviations: 18887529128259.867
[2025-12-02 22:52:03] 2025-12-03 03:51:27,146 | INFO     | mean x: 1764649606.454246
[2025-12-02 22:52:03] 2025-12-03 03:51:27,146 | INFO     | mean y: 2887123.6350658857
[2025-12-02 22:52:03] 2025-12-03 03:51:27,146 | INFO     | intersect: -5268222398.42802
[2025-12-02 22:52:03] 2025-12-03 03:51:27,149 | INFO     | chi2: 5.503690067802923
[2025-12-02 22:52:03] 2025-12-03 03:51:27,149 | INFO     | current chi2=5.503690067802923 (change=11.251216923919696 %)
[2025-12-02 22:52:03] 2025-12-03 03:51:27,149 | INFO     | right removable region: 2731
[2025-12-02 22:52:03] 2025-12-03 03:51:27,152 | INFO     | sum of square deviations: 6392800255254.966
[2025-12-02 22:52:03] 2025-12-03 03:51:27,668 | INFO     | sum of deviations: 15883126811032.238
[2025-12-02 22:52:03] 2025-12-03 03:51:27,668 | INFO     | mean x: 1764650216.4442012
[2025-12-02 22:52:03] 2025-12-03 03:51:27,669 | INFO     | mean y: 2882953.8643326038
[2025-12-02 22:52:03] 2025-12-03 03:51:27,669 | INFO     | intersect: -4381449740.06885
[2025-12-02 22:52:03] 2025-12-03 03:51:27,683 | INFO     | chi2: 7.642458792860685
[2025-12-02 22:52:03] 2025-12-03 03:51:27,684 | INFO     | current chi2=7.642458792860685 (change=31.803600910821583 %)
[2025-12-02 22:52:03] 2025-12-03 03:51:27,714 | INFO     | sum of square deviations: 6357892139954.209
[2025-12-02 22:52:03] 2025-12-03 03:51:28,142 | INFO     | sum of deviations: 15277057052497.158
[2025-12-02 22:52:03] 2025-12-03 03:51:28,142 | INFO     | mean x: 1764650368.946657
[2025-12-02 22:52:03] 2025-12-03 03:51:28,142 | INFO     | mean y: 2885600.734015345
[2025-12-02 22:52:03] 2025-12-03 03:51:28,142 | INFO     | intersect: -4237303406.9867725
[2025-12-02 22:52:03] 2025-12-03 03:51:28,145 | INFO     | chi2: 6.42309408881762
[2025-12-02 22:52:03] 2025-12-03 03:51:28,145 | INFO     | current chi2=6.42309408881762 (change=15.95513612951571 %)
[2025-12-02 22:52:03] 2025-12-03 03:51:28,146 | INFO     | left removable region: 20
[2025-12-02 22:52:03] 2025-12-03 03:51:28,148 | INFO     | sum of square deviations: 6178430633507.851
[2025-12-02 22:52:03] 2025-12-03 03:51:28,571 | INFO     | monitor loop #10470: job 0:6900297501 is in state 'finished'
[2025-12-02 22:52:03] 2025-12-03 03:51:28,571 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 22:52:03] 2025-12-03 03:51:28,813 | INFO     | sum of deviations: 16929253815922.197
[2025-12-02 22:52:03] 2025-12-03 03:51:28,814 | INFO     | mean x: 1764650185.9609
[2025-12-02 22:52:03] 2025-12-03 03:51:28,814 | INFO     | mean y: 2896453.331980819
[2025-12-02 22:52:03] 2025-12-03 03:51:28,814 | INFO     | intersect: -4832346129.538141
[2025-12-02 22:52:03] 2025-12-03 03:51:28,856 | INFO     | chi2: 0.4545002601662307
[2025-12-02 22:52:03] 2025-12-03 03:51:28,857 | INFO     | current memory leak: 2.74 B/s (using 2711 data points, chi2=0.45)
[2025-12-02 22:52:03] 2025-12-03 03:51:28,860 | INFO     | could have reported an average CPU frequency of 2748 MHz (95 samples)
[2025-12-02 22:52:03] 2025-12-03 03:51:28,860 | INFO     | ..............................
[2025-12-02 22:52:03] 2025-12-03 03:51:28,860 | INFO     | . Timing measurements:
[2025-12-02 22:52:03] 2025-12-03 03:51:28,860 | INFO     | . get job = 0 s
[2025-12-02 22:52:03] 2025-12-03 03:51:28,860 | INFO     | . initial setup = 9 s
[2025-12-02 22:52:03] 2025-12-03 03:51:28,869 | INFO     | . payload setup = 48 s
[2025-12-02 22:52:03] 2025-12-03 03:51:28,869 | INFO     | . stage-in = 0 s
[2025-12-02 22:52:03] 2025-12-03 03:51:28,869 | INFO     | . payload execution = 167575 s
[2025-12-02 22:52:03] 2025-12-03 03:51:28,869 | INFO     | . stage-out = 7 s
[2025-12-02 22:52:03] 2025-12-03 03:51:28,869 | INFO     | . log creation = 2 s
[2025-12-02 22:52:03] 2025-12-03 03:51:28,869 | INFO     | ..............................
[2025-12-02 22:52:03] 2025-12-03 03:51:29,533 | INFO     | PID=2116616 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 22:52:03] 2025-12-03 03:51:29,533 | INFO     | .. there are 10 such processes running
[2025-12-02 22:52:03] 2025-12-03 03:51:29,757 | INFO     | 
[2025-12-02 22:52:03] 2025-12-03 03:51:29,758 | INFO     | job summary report
[2025-12-02 22:52:03] 2025-12-03 03:51:29,758 | INFO     | --------------------------------------------------
[2025-12-02 22:52:03] 2025-12-03 03:51:29,758 | INFO     | PanDA job id: 6900297501
[2025-12-02 22:52:03] 2025-12-03 03:51:29,758 | INFO     | task id: 47556173
[2025-12-02 22:52:03] 2025-12-03 03:51:29,758 | INFO     | errors: (none)
[2025-12-02 22:52:03] 2025-12-03 03:51:29,758 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 22:52:03] 2025-12-03 03:51:29,758 | INFO     | pilot state: finished 
[2025-12-02 22:52:03] 2025-12-03 03:51:29,758 | INFO     | transexitcode: 0
[2025-12-02 22:52:03] 2025-12-03 03:51:29,758 | INFO     | exeerrorcode: 0
[2025-12-02 22:52:03] 2025-12-03 03:51:29,758 | INFO     | exeerrordiag: 
[2025-12-02 22:52:03] 2025-12-03 03:51:29,758 | INFO     | exitcode: 0
[2025-12-02 22:52:03] 2025-12-03 03:51:29,759 | INFO     | exitmsg: OK
[2025-12-02 22:52:03] 2025-12-03 03:51:29,759 | INFO     | cpuconsumptiontime: 261590 s
[2025-12-02 22:52:03] 2025-12-03 03:51:29,759 | INFO     | nevents: 1000
[2025-12-02 22:52:03] 2025-12-03 03:51:29,759 | INFO     | neventsw: 0
[2025-12-02 22:52:03] 2025-12-03 03:51:29,759 | INFO     | pid: 2142749
[2025-12-02 22:52:03] 2025-12-03 03:51:29,759 | INFO     | pgrp: 2142749
[2025-12-02 22:52:03] 2025-12-03 03:51:29,759 | INFO     | corecount: 8
[2025-12-02 22:52:03] 2025-12-03 03:51:29,759 | INFO     | event service: False
[2025-12-02 22:52:03] 2025-12-03 03:51:29,759 | INFO     | sizes: {0: 2284090, 1: 2284146, 2: 2284373, 3: 2284373, 13: 2284401, 24: 2284457, 35: 2284613, 41: 2284903, 47: 2284931, 167628: 2388367, 167629: 2388366, 167637: 
[2025-12-02 22:52:03] 2025-12-03 03:51:29,759 | INFO     | --------------------------------------------------
[2025-12-02 22:52:03] 2025-12-03 03:51:29,759 | INFO     | 
[2025-12-02 22:52:03] 2025-12-03 03:51:29,759 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-12-02 22:52:03] 2025-12-03 03:51:29,939 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 22:52:03] 2025-12-03 03:51:29,939 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 22:52:03] 2025-12-03 03:51:29,939 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 22:52:03] 2025-12-03 03:51:29,939 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 22:52:03] 2025-12-03 03:51:29,940 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 22:52:03] 2025-12-03 03:51:29,940 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 22:52:03] 2025-12-03 03:51:29,940 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 22:52:03] 2025-12-03 03:51:29,940 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 22:52:03] 2025-12-03 03:51:29,940 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 22:52:03] 2025-12-03 03:51:29,940 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 22:52:03] 2025-12-03 03:51:29,940 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 22:52:03] 2025-12-03 03:51:29,940 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 22:52:03] 2025-12-03 03:51:29,940 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 22:52:03] 2025-12-03 03:51:29,940 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 22:52:03] 2025-12-03 03:51:29,940 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 22:52:03] 2025-12-03 03:51:29,940 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 22:52:03] 2025-12-03 03:51:29,940 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 22:52:03] 2025-12-03 03:51:29,941 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 22:52:03] 2025-12-03 03:51:29,941 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 22:52:03] 2025-12-03 03:51:29,941 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 22:52:03] 2025-12-03 03:51:29,941 | INFO     | job 6900297501 has completed (purged errors)
[2025-12-02 22:52:03] 2025-12-03 03:51:29,941 | INFO     | overall cleanup function is called
[2025-12-02 22:52:03] 2025-12-03 03:51:31,054 | INFO     | --- collectZombieJob: --- 10, [2142749]
[2025-12-02 22:52:03] 2025-12-03 03:51:31,054 | INFO     | zombie collector waiting for pid 2142749
[2025-12-02 22:52:03] 2025-12-03 03:51:31,054 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 22:52:03] 2025-12-03 03:51:31,054 | INFO     | collected zombie processes
[2025-12-02 22:52:03] 2025-12-03 03:51:31,054 | INFO     | will attempt to kill all subprocesses of pid=2142749
[2025-12-02 22:52:03] 2025-12-03 03:51:31,584 | INFO     | process IDs to be killed: [2142749] (in reverse order)
[2025-12-02 22:52:03] 2025-12-03 03:51:31,743 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 22:52:03] 2025-12-03 03:51:31,744 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 22:52:03] 2025-12-03 03:51:31,759 | INFO     | did not find any defunct processes belonging to 2142749
[2025-12-02 22:52:03] 2025-12-03 03:51:31,775 | INFO     | did not find any defunct processes belonging to 2142749
[2025-12-02 22:52:03] 2025-12-03 03:51:31,780 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 22:52:03] 2025-12-03 03:51:31,780 | INFO     | ready for new job
[2025-12-02 22:52:03] 2025-12-03 03:51:31,781 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 22:52:03] 2025-12-03 03:51:31,799 | INFO     | ***************************************
[2025-12-02 22:52:03] 2025-12-03 03:51:31,799 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 22:52:03] 2025-12-03 03:51:31,799 | INFO     | ***************************************
[2025-12-02 22:52:03] 2025-12-03 03:51:31,799 | INFO     | 
[2025-12-02 22:52:03] 2025-12-03 03:51:31,806 | INFO     | architecture information:
[2025-12-02 22:52:03] 2025-12-03 03:51:31,811 | INFO     | executing command: cat /etc/os-release
[2025-12-02 22:52:03] 2025-12-03 03:51:31,893 | INFO     | cat /etc/os-release:
[2025-12-02 22:52:03] NAME="CentOS Linux"
[2025-12-02 22:52:03] VERSION="7 (Core)"
[2025-12-02 22:52:03] ID="centos"
[2025-12-02 22:52:03] ID_LIKE="rhel fedora"
[2025-12-02 22:52:03] VERSION_ID="7"
[2025-12-02 22:52:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 22:52:03] ANSI_COLOR="0;31"
[2025-12-02 22:52:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 22:52:03] HOME_URL="https://www.centos.org/"
[2025-12-02 22:52:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 22:52:03] 
[2025-12-02 22:52:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 22:52:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 22:52:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 22:52:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 22:52:03] 
[2025-12-02 22:52:03] 2025-12-03 03:51:31,894 | INFO     | ***************************************
[2025-12-02 22:52:03] 2025-12-03 03:51:32,398 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-12-02 22:52:03] 2025-12-03 03:51:32,444 | INFO     | sufficient remaining disk space (71835844608 B)
[2025-12-02 22:52:03] 2025-12-03 03:51:32,444 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 22:52:03] 2025-12-03 03:51:32,444 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 22:52:03] 2025-12-03 03:51:32,445 | INFO     | update_server=False
[2025-12-02 22:52:03] 2025-12-03 03:51:32,445 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 22:52:03] 2025-12-03 03:51:32,445 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 22:52:03] 2025-12-03 03:51:32,445 | INFO     | aborting loop
[2025-12-02 22:52:03] 2025-12-03 03:51:32,445 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 22:52:03] 2025-12-03 03:51:32,447 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 22:52:03] 2025-12-03 03:51:33,328 | INFO     | all data control threads have been joined
[2025-12-02 22:52:03] 2025-12-03 03:51:33,372 | INFO     | all payload control threads have been joined
[2025-12-02 22:52:03] 2025-12-03 03:51:33,451 | INFO     | [job] retrieve thread has finished
[2025-12-02 22:52:03] 2025-12-03 03:51:33,451 | INFO     | [job] job monitor thread has finished
[2025-12-02 22:52:03] 2025-12-03 03:51:33,532 | INFO     | all job control threads have been joined
[2025-12-02 22:52:03] 2025-12-03 03:51:33,765 | INFO     | [job] validate thread has finished
[2025-12-02 22:52:03] 2025-12-03 03:51:34,001 | INFO     | [payload] failed_post thread has finished
[2025-12-02 22:52:03] 2025-12-03 03:51:34,336 | INFO     | [data] control thread has finished
[2025-12-02 22:52:03] 2025-12-03 03:51:34,378 | INFO     | [payload] control thread has finished
[2025-12-02 22:52:03] 2025-12-03 03:51:34,404 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 22:52:03] 2025-12-03 03:51:34,447 | INFO     | [data] copytool_in thread has finished
[2025-12-02 22:52:03] 2025-12-03 03:51:34,454 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 22:52:03] 2025-12-03 03:51:34,462 | INFO     | [data] copytool_out thread has finished
[2025-12-02 22:52:03] 2025-12-03 03:51:34,537 | INFO     | [job] control thread has finished
[2025-12-02 22:52:03] 2025-12-03 03:51:34,738 | INFO     | [payload] validate_post thread has finished
[2025-12-02 22:52:03] 2025-12-03 03:51:34,744 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 22:52:03] 2025-12-03 03:51:34,757 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 22:52:03] 2025-12-03 03:51:34,794 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 22:52:03] 2025-12-03 03:51:35,409 | INFO     | [job] queue monitor thread has finished
[2025-12-02 22:52:03] 2025-12-03 03:51:35,961 | INFO     | [monitor] cgroup control has ended
[2025-12-02 22:52:03] 2025-12-03 03:51:36,458 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 22:52:03] 2025-12-03 03:51:37,355 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140540141733696)>', '<ExcThread(monitor, started 140539483633408)>']
[2025-12-02 22:52:03] 2025-12-03 03:51:42,381 | INFO     | all workflow threads have been joined
[2025-12-02 22:52:03] 2025-12-03 03:51:42,382 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 22:52:03] 2025-12-03 03:51:42,382 | INFO     | traces error code: 0
[2025-12-02 22:52:03] 2025-12-03 03:51:42,382 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 22:52:03] 2025-12-03 03:52:02,380 | INFO     | PID=2116616 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 22:52:03] 2025-12-03 03:52:02,380 | INFO     | .. there are 10 such processes running
[2025-12-02 22:52:03] 2025-12-03 03:52:02,381 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 22:52:03] 2025-12-03 03:52:02,381 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 22:52:03] 2025-12-03 03:52:02,381 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 22:52:03] 2025-12-03 03:52:02,381 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 22:52:03] 2025-12-03 03:52:02,381 | INFO     | [monitor] control thread has ended
[2025-12-02 22:52:03] 2025-12-03 03:52:02,585 [wrapper] ==== pilot stdout END ====
[2025-12-02 22:52:03] 2025-12-03 03:52:02,589 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 22:52:03] 2025-12-03 03:52:02,593 [wrapper] pilotpid: 2116616
[2025-12-02 22:52:03] 2025-12-03 03:52:02,596 [wrapper] Pilot exit status: 0
[2025-12-02 22:52:03] 2025-12-03 03:52:02,678 [wrapper] pandaids: 6900297501
[2025-12-02 22:52:03] 2025-12-03 03:52:02,755 [wrapper] cleanup supervisor_pilot 2243523 2116617
[2025-12-02 22:52:03] 2025-12-03 03:52:02,758 [wrapper] Test setup, not cleaning
[2025-12-02 22:52:03] 2025-12-03 03:52:02,761 [wrapper] apfmon messages muted
[2025-12-02 22:52:03] 2025-12-03 03:52:02,772 [wrapper] ==== wrapper stdout END ====
[2025-12-02 22:52:03] 2025-12-03 03:52:02,797 [wrapper] ==== wrapper stderr END ====
[2025-12-02 22:52:03]  *** Error codes and diagnostics ***
[2025-12-02 22:52:03]     "exeErrorCode": 0,
[2025-12-02 22:52:03]     "exeErrorDiag": "",
[2025-12-02 22:52:03]     "pilotErrorCode": 0,
[2025-12-02 22:52:03]     "pilotErrorDiag": "",
[2025-12-02 22:52:03]  *** Listing of results directory ***
[2025-12-02 22:52:03] total 1348636
[2025-12-02 22:52:03] -rw-r--r--. 1 boincer umatlas    576529 Nov 27 19:58 pilot3.tar.gz
[2025-12-02 22:52:03] -rwx------. 1 boincer umatlas     36292 Nov 27 20:02 runpilot2-wrapper.sh
[2025-12-02 22:52:03] -rw-r--r--. 1 boincer umatlas      5112 Nov 27 20:05 queuedata.json
[2025-12-02 22:52:03] -rw-r--r--. 1 boincer umatlas       100 Dec  1 00:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 22:52:03] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  1 00:14 run_atlas
[2025-12-02 22:52:03] -rw-r--r--. 1 boincer umatlas       105 Dec  1 00:14 job.xml
[2025-12-02 22:52:03] -rw-r--r--. 2 boincer umatlas 409326942 Dec  1 00:14 EVNT.47483658._003444.pool.root.1
[2025-12-02 22:52:03] -rw-r--r--. 2 boincer umatlas     15847 Dec  1 00:14 start_atlas.sh
[2025-12-02 22:52:03] drwxrwx--x. 2 boincer umatlas      4096 Dec  1 00:14 shared
[2025-12-02 22:52:03] -rw-r--r--. 2 boincer umatlas    590111 Dec  1 00:14 input.tar.gz
[2025-12-02 22:52:03] -rw-r--r--. 1 boincer umatlas         0 Dec  1 00:14 boinc_lockfile
[2025-12-02 22:52:03] -rw-r--r--. 1 boincer umatlas      2788 Dec  1 00:14 pandaJob.out
[2025-12-02 22:52:03] -rw-------. 1 boincer umatlas        57 Dec  1 00:14 setup.sh.local
[2025-12-02 22:52:03] -rw-------. 1 boincer umatlas    993248 Dec  1 00:15 agis_schedconf.cvmfs.json
[2025-12-02 22:52:03] drwx------. 5 boincer umatlas      4096 Dec  1 00:15 pilot3
[2025-12-02 22:52:03] -rw-r--r--. 1 boincer umatlas       533 Dec  2 22:30 boinc_task_state.xml
[2025-12-02 22:52:03] -rw-r--r--. 1 boincer umatlas      6843 Dec  2 22:46 init_data.xml
[2025-12-02 22:52:03] -rw-------. 1 boincer umatlas 917720062 Dec  2 22:49 HITS.47556173._004008.pool.root.1
[2025-12-02 22:52:03] -rw-------. 1 boincer umatlas      1060 Dec  2 22:50 memory_monitor_summary.json
[2025-12-02 22:52:03] -rw-------. 1 boincer umatlas   1516240 Dec  2 22:50 agis_ddmendpoints.agis.ALL.json
[2025-12-02 22:52:03] -rw-------. 1 boincer umatlas   3416644 Dec  2 22:50 log.47556173._004008.job.log.tgz.1
[2025-12-02 22:52:03] -rw-------. 1 boincer umatlas        95 Dec  2 22:51 pilot_heartbeat.json
[2025-12-02 22:52:03] -rw-------. 1 boincer umatlas      8621 Dec  2 22:51 heartbeat.json
[2025-12-02 22:52:03] -rw-------. 1 boincer umatlas       823 Dec  2 22:52 pilotlog.txt
[2025-12-02 22:52:03] -rw-------. 1 boincer umatlas  21599704 Dec  2 22:52 log.47556173._004008.job.log.1
[2025-12-02 22:52:03] -rw-------. 1 boincer umatlas       353 Dec  2 22:52 output.list
[2025-12-02 22:52:03] -rw-r--r--. 1 boincer umatlas       620 Dec  2 22:52 runtime_log
[2025-12-02 22:52:03] -rw-------. 1 boincer umatlas  25036800 Dec  2 22:52 result.tar.gz
[2025-12-02 22:52:03] -rw-r--r--. 1 boincer umatlas      8192 Dec  2 22:52 boinc_mmap_file
[2025-12-02 22:52:03] -rw-r--r--. 1 boincer umatlas        29 Dec  2 22:52 wrapper_checkpoint.txt
[2025-12-02 22:52:03] -rw-r--r--. 1 boincer umatlas      9354 Dec  2 22:52 runtime_log.err
[2025-12-02 22:52:03] -rw-------. 1 boincer umatlas       667 Dec  2 22:52 5GLMDmO31i8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFJOKDmD4aYfn.diag
[2025-12-02 22:52:03] -rw-r--r--. 1 boincer umatlas     21355 Dec  2 22:52 stderr.txt
[2025-12-02 22:52:03] HITS file was successfully produced:
[2025-12-02 22:52:03] -rw-------. 1 boincer umatlas 917720062 Dec  2 22:49 shared/HITS.pool.root.1
[2025-12-02 22:52:03]  *** Contents of shared directory: ***
[2025-12-02 22:52:03] total 1321004
[2025-12-02 22:52:03] -rw-r--r--. 2 boincer umatlas 409326942 Dec  1 00:14 ATLAS.root_0
[2025-12-02 22:52:03] -rw-r--r--. 2 boincer umatlas     15847 Dec  1 00:14 start_atlas.sh
[2025-12-02 22:52:03] -rw-r--r--. 2 boincer umatlas    590111 Dec  1 00:14 input.tar.gz
[2025-12-02 22:52:03] -rw-------. 1 boincer umatlas 917720062 Dec  2 22:49 HITS.pool.root.1
[2025-12-02 22:52:03] -rw-------. 1 boincer umatlas  25036800 Dec  2 22:52 result.tar.gz
22:52:05 (2105047): run_atlas exited; CPU time 264235.896208
22:52:05 (2105047): called boinc_finish(0)

</stderr_txt>
]]>

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