Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:13:23 (131915): wrapper (7.7.26015): starting
00:13:23 (131915): wrapper: running run_atlas (--nthreads 8)
[2025-12-01 00:13:23] Arguments: --nthreads 8
[2025-12-01 00:13:23] Threads: 8
[2025-12-01 00:13:23] Checking for CVMFS
[2025-12-01 00:13:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 00:13:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 00:13:24] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 00:13:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 00:13:26] 2.13.3.0 14106 36766 254404 153506 2 111 26571375 40960001 49821 16776704 0 470461759 99.755 302000706 46340 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-01 00:13:26] CVMFS is ok
[2025-12-01 00:13:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 00:13:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 00:13:26] Further information can be found at the LHC@home message board.
[2025-12-01 00:13:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 00:13:26] Checking for apptainer binary...
[2025-12-01 00:13:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 00:13:26] Running /usr/bin/apptainer --version
[2025-12-01 00:13:26] apptainer version 1.4.4-1.el9
[2025-12-01 00:13:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 00:13:26] c8-7-5.aglt2.org
[2025-12-01 00:13:26] apptainer works
[2025-12-01 00:13:26] Set ATHENA_PROC_NUMBER=8
[2025-12-01 00:13:26] Set ATHENA_CORE_NUMBER=8
[2025-12-01 00:13:27] Starting ATLAS job with PandaID=6894286257
[2025-12-01 00:13:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 15:15:19]  *** The last 200 lines of the pilot log: ***
[2025-12-01 15:15:19] 2025-12-01 20:14:00,926 | INFO     | monitor loop #3045: job 0:6894286257 is in state 'finished'
[2025-12-01 15:15:19] 2025-12-01 20:14:00,926 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-01 15:15:19] 2025-12-01 20:14:02,601 | INFO     | time since job start (53930s) is within the limit (172800.0s)
[2025-12-01 15:15:19] 2025-12-01 20:14:03,448 | INFO     | monitor loop #3046: job 0:6894286257 is in state 'finished'
[2025-12-01 15:15:19] 2025-12-01 20:14:03,448 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-01 15:15:19] 2025-12-01 20:14:04,608 | INFO     | time since job start (53932s) is within the limit (172800.0s)
[2025-12-01 15:15:19] 2025-12-01 20:14:05,980 | INFO     | monitor loop #3047: job 0:6894286257 is in state 'finished'
[2025-12-01 15:15:19] 2025-12-01 20:14:05,980 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-01 15:15:19] 2025-12-01 20:14:08,024 | INFO     | PID=146472 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-01 15:15:19] 2025-12-01 20:14:08,025 | INFO     | .. there are 85 such processes running
[2025-12-01 15:15:19] 2025-12-01 20:14:08,176 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-01 15:15:19] 2025-12-01 20:14:08,182 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9957031249996
[2025-12-01 15:15:19] 2025-12-01 20:14:08,219 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-6894286257/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 15:15:19] 2025-12-01 20:14:08,219 | INFO     | extracted standard info from prmon json
[2025-12-01 15:15:19] 2025-12-01 20:14:08,219 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 15:15:19] 2025-12-01 20:14:08,219 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 15:15:19] 2025-12-01 20:14:08,250 | INFO     | fitting pss+swap vs Time
[2025-12-01 15:15:19] 2025-12-01 20:14:08,250 | INFO     | sum of square deviations: 211317016016.97763
[2025-12-01 15:15:19] 2025-12-01 20:14:08,290 | INFO     | sum of deviations: 1943923937115.6372
[2025-12-01 15:15:19] 2025-12-01 20:14:08,290 | INFO     | mean x: 1764593165.215909
[2025-12-01 15:15:19] 2025-12-01 20:14:08,290 | INFO     | mean y: 2785825.0545454547
[2025-12-01 15:15:19] 2025-12-01 20:14:08,290 | INFO     | intersect: -16229862911.847275
[2025-12-01 15:15:19] 2025-12-01 20:14:08,291 | INFO     | chi2: 18.597775334886624
[2025-12-01 15:15:19] 2025-12-01 20:14:08,291 | INFO     | sum of square deviations: 207735976842.17148
[2025-12-01 15:15:19] 2025-12-01 20:14:08,342 | INFO     | sum of deviations: 2247857245646.722
[2025-12-01 15:15:19] 2025-12-01 20:14:08,342 | INFO     | mean x: 1764593012.7257142
[2025-12-01 15:15:19] 2025-12-01 20:14:08,342 | INFO     | mean y: 2798762.928
[2025-12-01 15:15:19] 2025-12-01 20:14:08,342 | INFO     | intersect: -19091405570.713665
[2025-12-01 15:15:19] 2025-12-01 20:14:08,342 | INFO     | chi2: 14.990545837940314
[2025-12-01 15:15:19] 2025-12-01 20:14:08,342 | INFO     | current chi2=14.990545837940314 (change=19.396026847252486 %)
[2025-12-01 15:15:19] 2025-12-01 20:14:08,342 | INFO     | right removable region: 874
[2025-12-01 15:15:19] 2025-12-01 20:14:08,343 | INFO     | sum of square deviations: 207735055742.17166
[2025-12-01 15:15:19] 2025-12-01 20:14:08,352 | INFO     | sum of deviations: 1583118248792.547
[2025-12-01 15:15:19] 2025-12-01 20:14:08,352 | INFO     | mean x: 1764593317.7257142
[2025-12-01 15:15:19] 2025-12-01 20:14:08,352 | INFO     | mean y: 2801185.402285714
[2025-12-01 15:15:19] 2025-12-01 20:14:08,352 | INFO     | intersect: -13444904465.473331
[2025-12-01 15:15:19] 2025-12-01 20:14:08,352 | INFO     | chi2: 13.861817120898989
[2025-12-01 15:15:19] 2025-12-01 20:14:08,352 | INFO     | current chi2=13.861817120898989 (change=25.465186715658895 %)
[2025-12-01 15:15:19] 2025-12-01 20:14:08,353 | INFO     | sum of square deviations: 204193793904.6956
[2025-12-01 15:15:19] 2025-12-01 20:14:08,362 | INFO     | sum of deviations: 1278958005573.8953
[2025-12-01 15:15:19] 2025-12-01 20:14:08,362 | INFO     | mean x: 1764593470.2356322
[2025-12-01 15:15:19] 2025-12-01 20:14:08,362 | INFO     | mean y: 2814285.5517241377
[2025-12-01 15:15:19] 2025-12-01 20:14:08,362 | INFO     | intersect: -11049632031.179283
[2025-12-01 15:15:19] 2025-12-01 20:14:08,362 | INFO     | chi2: 10.669416308732478
[2025-12-01 15:15:19] 2025-12-01 20:14:08,362 | INFO     | current chi2=10.669416308732478 (change=23.030175512512262 %)
[2025-12-01 15:15:19] 2025-12-01 20:14:08,362 | INFO     | left removable region: 20
[2025-12-01 15:15:19] 2025-12-01 20:14:08,363 | INFO     | sum of square deviations: 193133855311.72006
[2025-12-01 15:15:19] 2025-12-01 20:14:08,371 | INFO     | sum of deviations: 1327560457748.3994
[2025-12-01 15:15:19] 2025-12-01 20:14:08,371 | INFO     | mean x: 1764593592.2634661
[2025-12-01 15:15:19] 2025-12-01 20:14:08,371 | INFO     | mean y: 2844917.682669789
[2025-12-01 15:15:19] 2025-12-01 20:14:08,371 | INFO     | intersect: -12126590769.83152
[2025-12-01 15:15:19] 2025-12-01 20:14:08,372 | INFO     | chi2: 4.0772007927730165
[2025-12-01 15:15:19] 2025-12-01 20:14:08,372 | INFO     | current memory leak: 6.87 B/s (using 854 data points, chi2=4.08)
[2025-12-01 15:15:19] 2025-12-01 20:14:08,373 | INFO     | could have reported an average CPU frequency of 3788 MHz (33 samples)
[2025-12-01 15:15:19] 2025-12-01 20:14:08,373 | INFO     | ..............................
[2025-12-01 15:15:19] 2025-12-01 20:14:08,373 | INFO     | . Timing measurements:
[2025-12-01 15:15:19] 2025-12-01 20:14:08,373 | INFO     | . get job = 0 s
[2025-12-01 15:15:19] 2025-12-01 20:14:08,373 | INFO     | . initial setup = 6 s
[2025-12-01 15:15:19] 2025-12-01 20:14:08,373 | INFO     | . payload setup = 74 s
[2025-12-01 15:15:19] 2025-12-01 20:14:08,373 | INFO     | . stage-in = 0 s
[2025-12-01 15:15:19] 2025-12-01 20:14:08,373 | INFO     | . payload execution = 53699 s
[2025-12-01 15:15:19] 2025-12-01 20:14:08,373 | INFO     | . stage-out = 5 s
[2025-12-01 15:15:19] 2025-12-01 20:14:08,373 | INFO     | . log creation = 1 s
[2025-12-01 15:15:19] 2025-12-01 20:14:08,373 | INFO     | ..............................
[2025-12-01 15:15:19] 2025-12-01 20:14:08,483 | INFO     | 
[2025-12-01 15:15:19] 2025-12-01 20:14:08,483 | INFO     | job summary report
[2025-12-01 15:15:19] 2025-12-01 20:14:08,483 | INFO     | --------------------------------------------------
[2025-12-01 15:15:19] 2025-12-01 20:14:08,483 | INFO     | PanDA job id: 6894286257
[2025-12-01 15:15:19] 2025-12-01 20:14:08,483 | INFO     | task id: 47533967
[2025-12-01 15:15:19] 2025-12-01 20:14:08,483 | INFO     | errors: (none)
[2025-12-01 15:15:19] 2025-12-01 20:14:08,483 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 15:15:19] 2025-12-01 20:14:08,483 | INFO     | pilot state: finished 
[2025-12-01 15:15:19] 2025-12-01 20:14:08,483 | INFO     | transexitcode: 0
[2025-12-01 15:15:19] 2025-12-01 20:14:08,483 | INFO     | exeerrorcode: 0
[2025-12-01 15:15:19] 2025-12-01 20:14:08,483 | INFO     | exeerrordiag: 
[2025-12-01 15:15:19] 2025-12-01 20:14:08,483 | INFO     | exitcode: 0
[2025-12-01 15:15:19] 2025-12-01 20:14:08,484 | INFO     | exitmsg: OK
[2025-12-01 15:15:19] 2025-12-01 20:14:08,484 | INFO     | cpuconsumptiontime: 135950 s
[2025-12-01 15:15:19] 2025-12-01 20:14:08,484 | INFO     | nevents: 1000
[2025-12-01 15:15:19] 2025-12-01 20:14:08,484 | INFO     | neventsw: 0
[2025-12-01 15:15:19] 2025-12-01 20:14:08,484 | INFO     | pid: 193839
[2025-12-01 15:15:19] 2025-12-01 20:14:08,484 | INFO     | pgrp: 193839
[2025-12-01 15:15:19] 2025-12-01 20:14:08,484 | INFO     | corecount: 8
[2025-12-01 15:15:19] 2025-12-01 20:14:08,484 | INFO     | event service: False
[2025-12-01 15:15:19] 2025-12-01 20:14:08,484 | INFO     | sizes: {0: 2284088, 1: 2284172, 2: 2284371, 13: 2284371, 24: 2284427, 35: 2284455, 46: 2284611, 50: 2284901, 56: 2284929, 53778: 2334194, 53784: 2343190, 53786: 23
[2025-12-01 15:15:19] 2025-12-01 20:14:08,484 | INFO     | --------------------------------------------------
[2025-12-01 15:15:19] 2025-12-01 20:14:08,484 | INFO     | 
[2025-12-01 15:15:19] 2025-12-01 20:14:08,484 | INFO     | executing command: ls -lF /tmp/boinchome/slots/10
[2025-12-01 15:15:19] 2025-12-01 20:14:08,576 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 15:15:19] 2025-12-01 20:14:08,576 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 15:15:19] 2025-12-01 20:14:08,576 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 15:15:19] 2025-12-01 20:14:08,576 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 15:15:19] 2025-12-01 20:14:08,576 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 15:15:19] 2025-12-01 20:14:08,576 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 15:15:19] 2025-12-01 20:14:08,576 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 15:15:19] 2025-12-01 20:14:08,576 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 15:15:19] 2025-12-01 20:14:08,576 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 15:15:19] 2025-12-01 20:14:08,576 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 15:15:19] 2025-12-01 20:14:08,576 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 15:15:19] 2025-12-01 20:14:08,576 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 15:15:19] 2025-12-01 20:14:08,576 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 15:15:19] 2025-12-01 20:14:08,576 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 15:15:19] 2025-12-01 20:14:08,576 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 15:15:19] 2025-12-01 20:14:08,576 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 15:15:19] 2025-12-01 20:14:08,577 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 15:15:19] 2025-12-01 20:14:08,577 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 15:15:19] 2025-12-01 20:14:08,577 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 15:15:19] 2025-12-01 20:14:08,577 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 15:15:19] 2025-12-01 20:14:08,577 | INFO     | job 6894286257 has completed (purged errors)
[2025-12-01 15:15:19] 2025-12-01 20:14:08,577 | INFO     | overall cleanup function is called
[2025-12-01 15:15:19] 2025-12-01 20:14:09,610 | INFO     | --- collectZombieJob: --- 10, [193839]
[2025-12-01 15:15:19] 2025-12-01 20:14:09,610 | INFO     | zombie collector waiting for pid 193839
[2025-12-01 15:15:19] 2025-12-01 20:14:09,610 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 15:15:19] 2025-12-01 20:14:09,610 | INFO     | collected zombie processes
[2025-12-01 15:15:19] 2025-12-01 20:14:09,610 | INFO     | will attempt to kill all subprocesses of pid=193839
[2025-12-01 15:15:19] 2025-12-01 20:14:10,924 | INFO     | process IDs to be killed: [193839] (in reverse order)
[2025-12-01 15:15:19] 2025-12-01 20:14:11,357 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 15:15:19] 2025-12-01 20:14:11,357 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 15:15:19] 2025-12-01 20:14:11,399 | INFO     | did not find any defunct processes belonging to 193839
[2025-12-01 15:15:19] 2025-12-01 20:14:11,437 | INFO     | did not find any defunct processes belonging to 193839
[2025-12-01 15:15:19] 2025-12-01 20:14:11,453 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 15:15:19] 2025-12-01 20:14:11,453 | INFO     | ready for new job
[2025-12-01 15:15:19] 2025-12-01 20:14:11,453 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 15:15:19] 2025-12-01 20:14:11,455 | INFO     | ***************************************
[2025-12-01 15:15:19] 2025-12-01 20:14:11,455 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 15:15:19] 2025-12-01 20:14:11,456 | INFO     | ***************************************
[2025-12-01 15:15:19] 2025-12-01 20:14:11,456 | INFO     | 
[2025-12-01 15:15:19] 2025-12-01 20:14:11,473 | INFO     | architecture information:
[2025-12-01 15:15:19] 2025-12-01 20:14:11,498 | INFO     | executing command: cat /etc/os-release
[2025-12-01 15:15:19] 2025-12-01 20:14:11,670 | INFO     | cat /etc/os-release:
[2025-12-01 15:15:19] NAME="CentOS Linux"
[2025-12-01 15:15:19] VERSION="7 (Core)"
[2025-12-01 15:15:19] ID="centos"
[2025-12-01 15:15:19] ID_LIKE="rhel fedora"
[2025-12-01 15:15:19] VERSION_ID="7"
[2025-12-01 15:15:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 15:15:19] ANSI_COLOR="0;31"
[2025-12-01 15:15:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 15:15:19] HOME_URL="https://www.centos.org/"
[2025-12-01 15:15:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 15:15:19] 
[2025-12-01 15:15:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 15:15:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 15:15:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 15:15:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 15:15:19] 
[2025-12-01 15:15:19] 2025-12-01 20:14:11,670 | INFO     | ***************************************
[2025-12-01 15:15:19] 2025-12-01 20:14:12,174 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2025-12-01 15:15:19] 2025-12-01 20:14:12,226 | INFO     | sufficient remaining disk space (162175909888 B)
[2025-12-01 15:15:19] 2025-12-01 20:14:12,226 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 15:15:19] 2025-12-01 20:14:12,226 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 15:15:19] 2025-12-01 20:14:12,226 | INFO     | update_server=False
[2025-12-01 15:15:19] 2025-12-01 20:14:12,226 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 15:15:19] 2025-12-01 20:14:12,227 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 15:15:19] 2025-12-01 20:14:12,227 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 15:15:19] 2025-12-01 20:14:12,227 | INFO     | aborting loop
[2025-12-01 15:15:19] 2025-12-01 20:14:12,656 | INFO     | all data control threads have been joined
[2025-12-01 15:15:19] 2025-12-01 20:14:12,829 | INFO     | all job control threads have been joined
[2025-12-01 15:15:19] 2025-12-01 20:14:13,232 | INFO     | [job] retrieve thread has finished
[2025-12-01 15:15:19] 2025-12-01 20:14:13,236 | INFO     | [job] job monitor thread has finished
[2025-12-01 15:15:19] 2025-12-01 20:14:13,312 | INFO     | [data] copytool_in thread has finished
[2025-12-01 15:15:19] 2025-12-01 20:14:13,505 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 15:15:19] 2025-12-01 20:14:13,540 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 15:15:19] 2025-12-01 20:14:13,549 | INFO     | [job] validate thread has finished
[2025-12-01 15:15:19] 2025-12-01 20:14:13,556 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 15:15:19] 2025-12-01 20:14:13,662 | INFO     | [data] control thread has finished
[2025-12-01 15:15:19] 2025-12-01 20:14:13,688 | INFO     | all payload control threads have been joined
[2025-12-01 15:15:19] 2025-12-01 20:14:13,835 | INFO     | [job] control thread has finished
[2025-12-01 15:15:19] 2025-12-01 20:14:13,878 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 15:15:19] 2025-12-01 20:14:13,959 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 15:15:19] 2025-12-01 20:14:13,991 | INFO     | [payload] validate_post thread has finished
[2025-12-01 15:15:19] 2025-12-01 20:14:14,234 | INFO     | [data] copytool_out thread has finished
[2025-12-01 15:15:19] 2025-12-01 20:14:14,354 | INFO     | [payload] failed_post thread has finished
[2025-12-01 15:15:19] 2025-12-01 20:14:14,510 | INFO     | [job] queue monitor thread has finished
[2025-12-01 15:15:19] 2025-12-01 20:14:14,708 | INFO     | [payload] control thread has finished
[2025-12-01 15:15:19] 2025-12-01 20:14:15,489 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 15:15:19] 2025-12-01 20:14:19,507 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 15:15:19] 2025-12-01 20:14:42,096 | INFO     | PID=146472 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-01 15:15:19] 2025-12-01 20:14:42,096 | INFO     | .. there are 84 such processes running
[2025-12-01 15:15:19] 2025-12-01 20:14:42,096 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 15:15:19] 2025-12-01 20:14:42,096 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 15:15:19] 2025-12-01 20:14:42,096 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 15:15:19] 2025-12-01 20:14:46,652 | INFO     | [monitor] cgroup control has ended
[2025-12-01 15:15:19] 2025-12-01 20:14:48,682 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140185732347712)>', '<ExcThread(monitor, started 140184570029824)>']
[2025-12-01 15:15:19] 2025-12-01 20:14:49,163 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 15:15:19] 2025-12-01 20:14:49,163 | INFO     | [monitor] control thread has ended
[2025-12-01 15:15:19] 2025-12-01 20:14:53,714 | INFO     | all workflow threads have been joined
[2025-12-01 15:15:19] 2025-12-01 20:14:53,715 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 15:15:19] 2025-12-01 20:14:53,715 | INFO     | traces error code: 0
[2025-12-01 15:15:19] 2025-12-01 20:14:53,715 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 15:15:19] 2025-12-01 20:14:54,049 [wrapper] ==== pilot stdout END ====
[2025-12-01 15:15:19] 2025-12-01 20:14:54,083 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 15:15:19] 2025-12-01 20:14:54,099 [wrapper] pilotpid: 146472
[2025-12-01 15:15:19] 2025-12-01 20:14:54,143 [wrapper] Pilot exit status: 0
[2025-12-01 15:15:19] 2025-12-01 20:14:54,258 [wrapper] pandaids: 6894286257
[2025-12-01 15:15:19] 2025-12-01 20:14:54,680 [wrapper] cleanup supervisor_pilot 2738107 146473
[2025-12-01 15:15:19] 2025-12-01 20:14:54,698 [wrapper] Test setup, not cleaning
[2025-12-01 15:15:19] 2025-12-01 20:14:54,720 [wrapper] apfmon messages muted
[2025-12-01 15:15:19] 2025-12-01 20:14:54,742 [wrapper] ==== wrapper stdout END ====
[2025-12-01 15:15:19] 2025-12-01 20:14:54,764 [wrapper] ==== wrapper stderr END ====
[2025-12-01 15:15:19]  *** Error codes and diagnostics ***
[2025-12-01 15:15:19]     "exeErrorCode": 0,
[2025-12-01 15:15:19]     "exeErrorDiag": "",
[2025-12-01 15:15:19]     "pilotErrorCode": 0,
[2025-12-01 15:15:19]     "pilotErrorDiag": "",
[2025-12-01 15:15:19]  *** Listing of results directory ***
[2025-12-01 15:15:19] total 1317456
[2025-12-01 15:15:19] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 05:18 pilot3.tar.gz
[2025-12-01 15:15:19] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 05:28 queuedata.json
[2025-12-01 15:15:19] -rwx------. 1 boincer umatlas     36292 Nov 21 05:28 runpilot2-wrapper.sh
[2025-12-01 15:15:19] -rw-r--r--. 1 boincer umatlas       100 Dec  1 00:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 15:15:19] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  1 00:13 run_atlas
[2025-12-01 15:15:19] -rw-r--r--. 1 boincer umatlas       105 Dec  1 00:13 job.xml
[2025-12-01 15:15:19] -rw-r--r--. 2 boincer umatlas 412160834 Dec  1 00:13 EVNT.47493127._002370.pool.root.1
[2025-12-01 15:15:19] -rw-r--r--. 2 boincer umatlas     15847 Dec  1 00:13 start_atlas.sh
[2025-12-01 15:15:19] drwxrwx--x. 2 boincer umatlas      4096 Dec  1 00:13 shared
[2025-12-01 15:15:19] -rw-r--r--. 2 boincer umatlas    590105 Dec  1 00:13 input.tar.gz
[2025-12-01 15:15:19] -rw-r--r--. 1 boincer umatlas         0 Dec  1 00:13 boinc_lockfile
[2025-12-01 15:15:19] -rw-r--r--. 1 boincer umatlas      2785 Dec  1 00:13 pandaJob.out
[2025-12-01 15:15:19] -rw-------. 1 boincer umatlas        57 Dec  1 00:13 setup.sh.local
[2025-12-01 15:15:19] -rw-------. 1 boincer umatlas    993248 Dec  1 00:15 agis_schedconf.cvmfs.json
[2025-12-01 15:15:19] drwx------. 5 boincer umatlas      4096 Dec  1 00:15 pilot3
[2025-12-01 15:15:19] -rw-r--r--. 1 boincer umatlas       533 Dec  1 14:56 boinc_task_state.xml
[2025-12-01 15:15:19] -rw-------. 1 boincer umatlas 915806915 Dec  1 15:11 HITS.47533967._003418.pool.root.1
[2025-12-01 15:15:19] -rw-------. 1 boincer umatlas      1072 Dec  1 15:13 memory_monitor_summary.json
[2025-12-01 15:15:19] -rw-------. 1 boincer umatlas   1516240 Dec  1 15:13 agis_ddmendpoints.agis.ALL.json
[2025-12-01 15:15:19] -rw-------. 1 boincer umatlas   2032871 Dec  1 15:13 log.47533967._003418.job.log.tgz.1
[2025-12-01 15:15:19] -rw-------. 1 boincer umatlas        95 Dec  1 15:13 pilot_heartbeat.json
[2025-12-01 15:15:19] -rw-r--r--. 1 boincer umatlas      7175 Dec  1 15:14 init_data.xml
[2025-12-01 15:15:19] -rw-------. 1 boincer umatlas      8626 Dec  1 15:14 heartbeat.json
[2025-12-01 15:15:19] -rw-------. 1 boincer umatlas      4825 Dec  1 15:14 pilotlog.txt
[2025-12-01 15:15:19] -rw-------. 1 boincer umatlas   6555082 Dec  1 15:14 log.47533967._003418.job.log.1
[2025-12-01 15:15:19] -rw-------. 1 boincer umatlas       353 Dec  1 15:14 output.list
[2025-12-01 15:15:19] -rw-r--r--. 1 boincer umatlas       620 Dec  1 15:14 runtime_log
[2025-12-01 15:15:19] -rw-------. 1 boincer umatlas   8611840 Dec  1 15:14 result.tar.gz
[2025-12-01 15:15:19] -rw-------. 1 boincer umatlas       663 Dec  1 15:14 xwbLDm1Ydg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoHJKDmsRlD2n.diag
[2025-12-01 15:15:19] -rw-r--r--. 1 boincer umatlas      9351 Dec  1 15:14 runtime_log.err
[2025-12-01 15:15:19] -rw-r--r--. 1 boincer umatlas        29 Dec  1 15:15 wrapper_checkpoint.txt
[2025-12-01 15:15:19] -rw-r--r--. 1 boincer umatlas      8192 Dec  1 15:15 boinc_mmap_file
[2025-12-01 15:15:19] -rw-r--r--. 1 boincer umatlas     21676 Dec  1 15:15 stderr.txt
[2025-12-01 15:15:19] HITS file was successfully produced:
[2025-12-01 15:15:19] -rw-------. 1 boincer umatlas 915806915 Dec  1 15:11 shared/HITS.pool.root.1
[2025-12-01 15:15:19]  *** Contents of shared directory: ***
[2025-12-01 15:15:19] total 1305864
[2025-12-01 15:15:19] -rw-r--r--. 2 boincer umatlas 412160834 Dec  1 00:13 ATLAS.root_0
[2025-12-01 15:15:19] -rw-r--r--. 2 boincer umatlas     15847 Dec  1 00:13 start_atlas.sh
[2025-12-01 15:15:19] -rw-r--r--. 2 boincer umatlas    590105 Dec  1 00:13 input.tar.gz
[2025-12-01 15:15:19] -rw-------. 1 boincer umatlas 915806915 Dec  1 15:11 HITS.pool.root.1
[2025-12-01 15:15:19] -rw-------. 1 boincer umatlas   8611840 Dec  1 15:14 result.tar.gz
15:15:20 (131915): run_atlas exited; CPU time 137172.639672
15:15:20 (131915): called boinc_finish(0)

</stderr_txt>
]]>

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