Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:35 (3133024): wrapper (7.7.26015): starting
00:05:35 (3133024): wrapper: running run_atlas (--nthreads 12)
[2025-12-01 00:05:35] Arguments: --nthreads 12
[2025-12-01 00:05:35] Threads: 12
[2025-12-01 00:05:35] Checking for CVMFS
[2025-12-01 00:05:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 00:05:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 00:05:36] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 00:05:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 00:05:36] 2.13.2.0 2615236 35605 233116 153505 1 784 36359540 40960000 25958 16776704 0 198106200 99.681 173182369 39004 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-01 00:05:36] CVMFS is ok
[2025-12-01 00:05:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 00:05:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 00:05:36] Further information can be found at the LHC@home message board.
[2025-12-01 00:05:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 00:05:36] Checking for apptainer binary...
[2025-12-01 00:05:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 00:05:36] Running /usr/bin/apptainer --version
[2025-12-01 00:05:36] apptainer version 1.4.4-1.el9
[2025-12-01 00:05:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 00:05:37] c-212-12.aglt2.org
[2025-12-01 00:05:37] apptainer works
[2025-12-01 00:05:37] Set ATHENA_PROC_NUMBER=12
[2025-12-01 00:05:37] Set ATHENA_CORE_NUMBER=12
[2025-12-01 00:05:37] Starting ATLAS job with PandaID=6898987913
[2025-12-01 00:05:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 00:04:11]  *** The last 200 lines of the pilot log: ***
[2025-12-02 00:04:11] 2025-12-02 05:03:08,325 | INFO     | time since job start (86220s) is within the limit (172800.0s)
[2025-12-02 00:04:11] 2025-12-02 05:03:09,279 | INFO     | monitor loop #5334: job 0:6898987913 is in state 'finished'
[2025-12-02 00:04:11] 2025-12-02 05:03:09,279 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 00:04:11] 2025-12-02 05:03:10,332 | INFO     | time since job start (86222s) is within the limit (172800.0s)
[2025-12-02 00:04:11] 2025-12-02 05:03:11,784 | INFO     | monitor loop #5335: job 0:6898987913 is in state 'finished'
[2025-12-02 00:04:11] 2025-12-02 05:03:11,784 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 00:04:11] 2025-12-02 05:03:12,362 | INFO     | time since job start (86224s) is within the limit (172800.0s)
[2025-12-02 00:04:11] 2025-12-02 05:03:14,289 | INFO     | monitor loop #5336: job 0:6898987913 is in state 'finished'
[2025-12-02 00:04:11] 2025-12-02 05:03:14,289 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 00:04:11] 2025-12-02 05:03:14,369 | INFO     | time since job start (86226s) is within the limit (172800.0s)
[2025-12-02 00:04:11] 2025-12-02 05:03:16,376 | INFO     | time since job start (86228s) is within the limit (172800.0s)
[2025-12-02 00:04:11] 2025-12-02 05:03:16,811 | INFO     | monitor loop #5337: job 0:6898987913 is in state 'finished'
[2025-12-02 00:04:11] 2025-12-02 05:03:16,812 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 00:04:11] 2025-12-02 05:03:17,273 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 00:04:11] 2025-12-02 05:03:17,296 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2896.9252291666653
[2025-12-02 00:04:11] 2025-12-02 05:03:17,315 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898987913/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 00:04:11] 2025-12-02 05:03:17,316 | INFO     | extracted standard info from prmon json
[2025-12-02 00:04:11] 2025-12-02 05:03:17,316 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 00:04:11] 2025-12-02 05:03:17,316 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 00:04:11] 2025-12-02 05:03:17,539 | INFO     | fitting pss+swap vs Time
[2025-12-02 00:04:11] 2025-12-02 05:03:17,570 | INFO     | sum of square deviations: 872961155881.4647
[2025-12-02 00:04:11] 2025-12-02 05:03:17,901 | INFO     | sum of deviations: 5955696609221.596
[2025-12-02 00:04:11] 2025-12-02 05:03:17,901 | INFO     | mean x: 1764608657.3413599
[2025-12-02 00:04:11] 2025-12-02 05:03:17,948 | INFO     | mean y: 3489880.799575071
[2025-12-02 00:04:11] 2025-12-02 05:03:17,948 | INFO     | intersect: -12035389199.128284
[2025-12-02 00:04:11] 2025-12-02 05:03:17,950 | INFO     | chi2: 25.82731399495259
[2025-12-02 00:04:11] 2025-12-02 05:03:17,952 | INFO     | sum of square deviations: 863721347699.4515
[2025-12-02 00:04:11] 2025-12-02 05:03:18,375 | INFO     | sum of deviations: 6570341745237.164
[2025-12-02 00:04:11] 2025-12-02 05:03:18,375 | INFO     | mean x: 1764608504.8479033
[2025-12-02 00:04:11] 2025-12-02 05:03:18,375 | INFO     | mean y: 3500022.935323383
[2025-12-02 00:04:11] 2025-12-02 05:03:18,375 | INFO     | intersect: -13419904358.910635
[2025-12-02 00:04:11] 2025-12-02 05:03:18,377 | INFO     | chi2: 22.013840114963468
[2025-12-02 00:04:11] 2025-12-02 05:03:18,377 | INFO     | current chi2=22.013840114963468 (change=14.765274781320217 %)
[2025-12-02 00:04:11] 2025-12-02 05:03:18,377 | INFO     | right removable region: 1406
[2025-12-02 00:04:11] 2025-12-02 05:03:18,436 | INFO     | sum of square deviations: 863719761699.4512
[2025-12-02 00:04:11] 2025-12-02 05:03:18,890 | INFO     | sum of deviations: 5308380198649.78
[2025-12-02 00:04:11] 2025-12-02 05:03:18,891 | INFO     | mean x: 1764608809.8479033
[2025-12-02 00:04:11] 2025-12-02 05:03:18,911 | INFO     | mean y: 3500561.6439232407
[2025-12-02 00:04:11] 2025-12-02 05:03:18,912 | INFO     | intersect: -10841700486.12263
[2025-12-02 00:04:11] 2025-12-02 05:03:18,913 | INFO     | chi2: 22.250394949677137
[2025-12-02 00:04:11] 2025-12-02 05:03:18,913 | INFO     | current chi2=22.250394949677137 (change=13.849365233932135 %)
[2025-12-02 00:04:11] 2025-12-02 05:03:18,913 | INFO     | left removable region: 10
[2025-12-02 00:04:11] 2025-12-02 05:03:18,938 | INFO     | sum of square deviations: 843620629918.5935
[2025-12-02 00:04:11] 2025-12-02 05:03:19,450 | INFO     | monitor loop #5338: job 0:6898987913 is in state 'finished'
[2025-12-02 00:04:11] 2025-12-02 05:03:19,450 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 00:04:11] 2025-12-02 05:03:19,610 | INFO     | sum of deviations: 5415028194483.152
[2025-12-02 00:04:11] 2025-12-02 05:03:19,610 | INFO     | mean x: 1764608779.3624642
[2025-12-02 00:04:11] 2025-12-02 05:03:19,610 | INFO     | mean y: 3523043.873209169
[2025-12-02 00:04:11] 2025-12-02 05:03:19,610 | INFO     | intersect: -11323139621.31352
[2025-12-02 00:04:11] 2025-12-02 05:03:19,611 | INFO     | chi2: 14.542542451486682
[2025-12-02 00:04:11] 2025-12-02 05:03:19,612 | INFO     | current memory leak: 6.42 B/s (using 1396 data points, chi2=14.54)
[2025-12-02 00:04:11] 2025-12-02 05:03:19,633 | INFO     | could have reported an average CPU frequency of 2983 MHz (51 samples)
[2025-12-02 00:04:11] 2025-12-02 05:03:19,633 | INFO     | ..............................
[2025-12-02 00:04:11] 2025-12-02 05:03:19,633 | INFO     | . Timing measurements:
[2025-12-02 00:04:11] 2025-12-02 05:03:19,633 | INFO     | . get job = 0 s
[2025-12-02 00:04:11] 2025-12-02 05:03:19,633 | INFO     | . initial setup = 3 s
[2025-12-02 00:04:11] 2025-12-02 05:03:19,633 | INFO     | . payload setup = 12 s
[2025-12-02 00:04:11] 2025-12-02 05:03:19,633 | INFO     | . stage-in = 0 s
[2025-12-02 00:04:11] 2025-12-02 05:03:19,633 | INFO     | . payload execution = 86140 s
[2025-12-02 00:04:11] 2025-12-02 05:03:19,633 | INFO     | . stage-out = 15 s
[2025-12-02 00:04:11] 2025-12-02 05:03:19,633 | INFO     | . log creation = 5 s
[2025-12-02 00:04:11] 2025-12-02 05:03:19,634 | INFO     | ..............................
[2025-12-02 00:04:11] 2025-12-02 05:03:20,977 | INFO     | 
[2025-12-02 00:04:11] 2025-12-02 05:03:20,977 | INFO     | job summary report
[2025-12-02 00:04:11] 2025-12-02 05:03:20,978 | INFO     | --------------------------------------------------
[2025-12-02 00:04:11] 2025-12-02 05:03:20,978 | INFO     | PanDA job id: 6898987913
[2025-12-02 00:04:11] 2025-12-02 05:03:20,978 | INFO     | task id: 47556161
[2025-12-02 00:04:11] 2025-12-02 05:03:20,978 | INFO     | errors: (none)
[2025-12-02 00:04:11] 2025-12-02 05:03:20,978 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 00:04:11] 2025-12-02 05:03:20,978 | INFO     | pilot state: finished 
[2025-12-02 00:04:11] 2025-12-02 05:03:20,978 | INFO     | transexitcode: 0
[2025-12-02 00:04:11] 2025-12-02 05:03:20,978 | INFO     | exeerrorcode: 0
[2025-12-02 00:04:11] 2025-12-02 05:03:20,978 | INFO     | exeerrordiag: 
[2025-12-02 00:04:11] 2025-12-02 05:03:20,978 | INFO     | exitcode: 0
[2025-12-02 00:04:11] 2025-12-02 05:03:20,978 | INFO     | exitmsg: OK
[2025-12-02 00:04:11] 2025-12-02 05:03:20,978 | INFO     | cpuconsumptiontime: 228277 s
[2025-12-02 00:04:11] 2025-12-02 05:03:20,979 | INFO     | nevents: 1000
[2025-12-02 00:04:11] 2025-12-02 05:03:20,979 | INFO     | neventsw: 0
[2025-12-02 00:04:11] 2025-12-02 05:03:20,979 | INFO     | pid: 3153384
[2025-12-02 00:04:11] 2025-12-02 05:03:20,979 | INFO     | pgrp: 3153384
[2025-12-02 00:04:11] 2025-12-02 05:03:20,979 | INFO     | corecount: 12
[2025-12-02 00:04:11] 2025-12-02 05:03:20,979 | INFO     | event service: False
[2025-12-02 00:04:11] 2025-12-02 05:03:20,979 | INFO     | sizes: {0: 2284314, 7: 2284576, 11: 2284604, 86157: 2349319, 86159: 2349318, 86176: 2358368, 86178: 2358552, 86207: 2358798}
[2025-12-02 00:04:11] 2025-12-02 05:03:20,979 | INFO     | --------------------------------------------------
[2025-12-02 00:04:11] 2025-12-02 05:03:20,979 | INFO     | 
[2025-12-02 00:04:11] 2025-12-02 05:03:20,979 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-02 00:04:11] 2025-12-02 05:03:21,179 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 00:04:11] 2025-12-02 05:03:21,180 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 00:04:11] 2025-12-02 05:03:21,180 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 00:04:11] 2025-12-02 05:03:21,180 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 00:04:11] 2025-12-02 05:03:21,180 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 00:04:11] 2025-12-02 05:03:21,180 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 00:04:11] 2025-12-02 05:03:21,180 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 00:04:11] 2025-12-02 05:03:21,180 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 00:04:11] 2025-12-02 05:03:21,180 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 00:04:11] 2025-12-02 05:03:21,180 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 00:04:11] 2025-12-02 05:03:21,180 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 00:04:11] 2025-12-02 05:03:21,180 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 00:04:11] 2025-12-02 05:03:21,181 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 00:04:11] 2025-12-02 05:03:21,181 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 00:04:11] 2025-12-02 05:03:21,181 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 00:04:11] 2025-12-02 05:03:21,181 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 00:04:11] 2025-12-02 05:03:21,181 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 00:04:11] 2025-12-02 05:03:21,181 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 00:04:11] 2025-12-02 05:03:21,181 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 00:04:11] 2025-12-02 05:03:21,181 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 00:04:11] 2025-12-02 05:03:21,181 | INFO     | job 6898987913 has completed (purged errors)
[2025-12-02 00:04:11] 2025-12-02 05:03:21,181 | INFO     | overall cleanup function is called
[2025-12-02 00:04:11] 2025-12-02 05:03:22,475 | INFO     | --- collectZombieJob: --- 10, [3153384]
[2025-12-02 00:04:11] 2025-12-02 05:03:22,475 | INFO     | zombie collector waiting for pid 3153384
[2025-12-02 00:04:11] 2025-12-02 05:03:22,476 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 00:04:11] 2025-12-02 05:03:22,476 | INFO     | collected zombie processes
[2025-12-02 00:04:11] 2025-12-02 05:03:22,476 | INFO     | will attempt to kill all subprocesses of pid=3153384
[2025-12-02 00:04:11] 2025-12-02 05:03:26,902 | INFO     | PID=3139373 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 00:04:11] 2025-12-02 05:03:26,903 | INFO     | .. there are 24 such processes running
[2025-12-02 00:04:11] 2025-12-02 05:03:28,792 | INFO     | process IDs to be killed: [3153384] (in reverse order)
[2025-12-02 00:04:11] 2025-12-02 05:03:29,704 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 00:04:11] 2025-12-02 05:03:29,704 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 00:04:11] 2025-12-02 05:03:29,872 | INFO     | did not find any defunct processes belonging to 3153384
[2025-12-02 00:04:11] 2025-12-02 05:03:30,234 | INFO     | did not find any defunct processes belonging to 3153384
[2025-12-02 00:04:11] 2025-12-02 05:03:30,427 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 00:04:11] 2025-12-02 05:03:30,428 | INFO     | ready for new job
[2025-12-02 00:04:11] 2025-12-02 05:03:30,428 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 00:04:11] 2025-12-02 05:03:30,473 | INFO     | ***************************************
[2025-12-02 00:04:11] 2025-12-02 05:03:30,473 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 00:04:11] 2025-12-02 05:03:30,473 | INFO     | ***************************************
[2025-12-02 00:04:11] 2025-12-02 05:03:30,473 | INFO     | 
[2025-12-02 00:04:11] 2025-12-02 05:03:30,562 | INFO     | architecture information:
[2025-12-02 00:04:11] 2025-12-02 05:03:30,615 | INFO     | executing command: cat /etc/os-release
[2025-12-02 00:04:11] 2025-12-02 05:03:30,868 | INFO     | cat /etc/os-release:
[2025-12-02 00:04:11] NAME="CentOS Linux"
[2025-12-02 00:04:11] VERSION="7 (Core)"
[2025-12-02 00:04:11] ID="centos"
[2025-12-02 00:04:11] ID_LIKE="rhel fedora"
[2025-12-02 00:04:11] VERSION_ID="7"
[2025-12-02 00:04:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 00:04:11] ANSI_COLOR="0;31"
[2025-12-02 00:04:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 00:04:11] HOME_URL="https://www.centos.org/"
[2025-12-02 00:04:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 00:04:11] 
[2025-12-02 00:04:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 00:04:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 00:04:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 00:04:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 00:04:11] 
[2025-12-02 00:04:11] 2025-12-02 05:03:30,869 | INFO     | ***************************************
[2025-12-02 00:04:11] 2025-12-02 05:03:31,372 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-02 00:04:11] 2025-12-02 05:03:31,488 | INFO     | sufficient remaining disk space (123069267968 B)
[2025-12-02 00:04:11] 2025-12-02 05:03:31,488 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 00:04:11] 2025-12-02 05:03:31,488 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 00:04:11] 2025-12-02 05:03:31,488 | INFO     | update_server=False
[2025-12-02 00:04:11] 2025-12-02 05:03:31,488 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 00:04:11] 2025-12-02 05:03:31,489 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 00:04:11] 2025-12-02 05:03:31,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 00:04:11] 2025-12-02 05:03:31,511 | INFO     | aborting loop
[2025-12-02 00:04:11] 2025-12-02 05:03:32,055 | INFO     | all data control threads have been joined
[2025-12-02 00:04:11] 2025-12-02 05:03:32,494 | INFO     | [job] retrieve thread has finished
[2025-12-02 00:04:11] 2025-12-02 05:03:32,501 | INFO     | [job] validate thread has finished
[2025-12-02 00:04:11] 2025-12-02 05:03:32,517 | INFO     | [job] job monitor thread has finished
[2025-12-02 00:04:11] 2025-12-02 05:03:32,586 | INFO     | all job control threads have been joined
[2025-12-02 00:04:11] 2025-12-02 05:03:32,741 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 00:04:11] 2025-12-02 05:03:32,863 | INFO     | all payload control threads have been joined
[2025-12-02 00:04:11] 2025-12-02 05:03:33,061 | INFO     | [data] control thread has finished
[2025-12-02 00:04:11] 2025-12-02 05:03:33,121 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 00:04:11] 2025-12-02 05:03:33,226 | INFO     | [data] copytool_in thread has finished
[2025-12-02 00:04:11] 2025-12-02 05:03:33,260 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 00:04:11] 2025-12-02 05:03:33,499 | INFO     | [data] copytool_out thread has finished
[2025-12-02 00:04:11] 2025-12-02 05:03:33,592 | INFO     | [job] control thread has finished
[2025-12-02 00:04:11] 2025-12-02 05:03:33,735 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 00:04:11] 2025-12-02 05:03:33,869 | INFO     | [payload] control thread has finished
[2025-12-02 00:04:11] 2025-12-02 05:03:33,954 | INFO     | [payload] validate_post thread has finished
[2025-12-02 00:04:11] 2025-12-02 05:03:34,031 | INFO     | [payload] failed_post thread has finished
[2025-12-02 00:04:11] 2025-12-02 05:03:34,147 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 00:04:11] 2025-12-02 05:03:34,658 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 00:04:11] 2025-12-02 05:03:35,153 | INFO     | [job] queue monitor thread has finished
[2025-12-02 00:04:11] 2025-12-02 05:03:38,680 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 00:04:11] 2025-12-02 05:03:39,692 | INFO     | [monitor] cgroup control has ended
[2025-12-02 00:04:11] 2025-12-02 05:03:40,929 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140157818918720)>', '<ExcThread(monitor, started 140157013432064)>']
[2025-12-02 00:04:11] 2025-12-02 05:03:45,955 | INFO     | all workflow threads have been joined
[2025-12-02 00:04:11] 2025-12-02 05:03:45,955 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 00:04:11] 2025-12-02 05:03:45,956 | INFO     | traces error code: 0
[2025-12-02 00:04:11] 2025-12-02 05:03:45,956 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 00:04:11] 2025-12-02 05:04:05,965 | INFO     | PID=3139373 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 00:04:11] 2025-12-02 05:04:05,965 | INFO     | .. there are 25 such processes running
[2025-12-02 00:04:11] 2025-12-02 05:04:05,977 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 00:04:11] 2025-12-02 05:04:05,977 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 00:04:11] 2025-12-02 05:04:05,977 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 00:04:11] 2025-12-02 05:04:05,978 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 00:04:11] 2025-12-02 05:04:05,978 | INFO     | [monitor] control thread has ended
[2025-12-02 00:04:11] 2025-12-02 05:04:09,611 [wrapper] ==== pilot stdout END ====
[2025-12-02 00:04:11] 2025-12-02 05:04:09,653 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 00:04:11] 2025-12-02 05:04:09,680 [wrapper] pilotpid: 3139373
[2025-12-02 00:04:11] 2025-12-02 05:04:09,707 [wrapper] Pilot exit status: 0
[2025-12-02 00:04:11] 2025-12-02 05:04:09,794 [wrapper] pandaids: 6898987913
[2025-12-02 00:04:11] 2025-12-02 05:04:10,413 [wrapper] cleanup supervisor_pilot 2365512 3139374
[2025-12-02 00:04:11] 2025-12-02 05:04:10,454 [wrapper] Test setup, not cleaning
[2025-12-02 00:04:11] 2025-12-02 05:04:10,475 [wrapper] apfmon messages muted
[2025-12-02 00:04:11] 2025-12-02 05:04:10,502 [wrapper] ==== wrapper stdout END ====
[2025-12-02 00:04:11] 2025-12-02 05:04:10,545 [wrapper] ==== wrapper stderr END ====
[2025-12-02 00:04:11]  *** Error codes and diagnostics ***
[2025-12-02 00:04:11]     "exeErrorCode": 0,
[2025-12-02 00:04:11]     "exeErrorDiag": "",
[2025-12-02 00:04:11]     "pilotErrorCode": 0,
[2025-12-02 00:04:11]     "pilotErrorDiag": "",
[2025-12-02 00:04:11]  *** Listing of results directory ***
[2025-12-02 00:04:11] total 1330676
[2025-12-02 00:04:11] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 19:28 queuedata.json
[2025-12-02 00:04:11] -rwx------. 1 boincer umatlas     36292 Nov 26 19:30 runpilot2-wrapper.sh
[2025-12-02 00:04:11] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 19:30 pilot3.tar.gz
[2025-12-02 00:04:11] -rw-r--r--. 1 boincer umatlas       100 Dec  1 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 00:04:11] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  1 00:05 run_atlas
[2025-12-02 00:04:11] -rw-r--r--. 1 boincer umatlas       105 Dec  1 00:05 job.xml
[2025-12-02 00:04:11] -rw-r--r--. 2 boincer umatlas 410951784 Dec  1 00:05 EVNT.47483658._002762.pool.root.1
[2025-12-02 00:04:11] drwxrwx--x. 2 boincer umatlas      4096 Dec  1 00:05 shared
[2025-12-02 00:04:11] -rw-r--r--. 2 boincer umatlas    590103 Dec  1 00:05 input.tar.gz
[2025-12-02 00:04:11] -rw-r--r--. 2 boincer umatlas     15847 Dec  1 00:05 start_atlas.sh
[2025-12-02 00:04:11] -rw-r--r--. 1 boincer umatlas         0 Dec  1 00:05 boinc_lockfile
[2025-12-02 00:04:11] -rw-r--r--. 1 boincer umatlas      2785 Dec  1 00:05 pandaJob.out
[2025-12-02 00:04:11] -rw-------. 1 boincer umatlas        57 Dec  1 00:05 setup.sh.local
[2025-12-02 00:04:11] -rw-------. 1 boincer umatlas    993248 Dec  1 00:06 agis_schedconf.cvmfs.json
[2025-12-02 00:04:11] drwx------. 5 boincer umatlas      4096 Dec  1 00:06 pilot3
[2025-12-02 00:04:11] -rw-r--r--. 1 boincer umatlas       533 Dec  1 23:24 boinc_task_state.xml
[2025-12-02 00:04:11] -rw-------. 1 boincer umatlas 919870327 Dec  1 23:59 HITS.47556161._007449.pool.root.1
[2025-12-02 00:04:11] -rw-------. 1 boincer umatlas      1068 Dec  2 00:02 memory_monitor_summary.json
[2025-12-02 00:04:11] -rw-r--r--. 1 boincer umatlas      6950 Dec  2 00:02 init_data.xml
[2025-12-02 00:04:11] -rw-------. 1 boincer umatlas   1516240 Dec  2 00:02 agis_ddmendpoints.agis.ALL.json
[2025-12-02 00:04:11] -rw-------. 1 boincer umatlas   2911658 Dec  2 00:02 log.47556161._007449.job.log.tgz.1
[2025-12-02 00:04:11] -rw-------. 1 boincer umatlas      8638 Dec  2 00:03 heartbeat.json
[2025-12-02 00:04:11] -rw-------. 1 boincer umatlas        95 Dec  2 00:04 pilot_heartbeat.json
[2025-12-02 00:04:11] -rw-------. 1 boincer umatlas       823 Dec  2 00:04 pilotlog.txt
[2025-12-02 00:04:11] -rw-r--r--. 1 boincer umatlas      8192 Dec  2 00:04 boinc_mmap_file
[2025-12-02 00:04:11] -rw-r--r--. 1 boincer umatlas        29 Dec  2 00:04 wrapper_checkpoint.txt
[2025-12-02 00:04:11] -rw-------. 1 boincer umatlas  11022191 Dec  2 00:04 log.47556161._007449.job.log.1
[2025-12-02 00:04:11] -rw-------. 1 boincer umatlas       353 Dec  2 00:04 output.list
[2025-12-02 00:04:11] -rw-r--r--. 1 boincer umatlas       620 Dec  2 00:04 runtime_log
[2025-12-02 00:04:11] -rw-------. 1 boincer umatlas  13957120 Dec  2 00:04 result.tar.gz
[2025-12-02 00:04:11] -rw-r--r--. 1 boincer umatlas      9345 Dec  2 00:04 runtime_log.err
[2025-12-02 00:04:11] -rw-------. 1 boincer umatlas       667 Dec  2 00:04 RCgKDmF5ei8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzSNKDmrwpyNm.diag
[2025-12-02 00:04:11] -rw-r--r--. 1 boincer umatlas     21869 Dec  2 00:04 stderr.txt
[2025-12-02 00:04:11] HITS file was successfully produced:
[2025-12-02 00:04:11] -rw-------. 1 boincer umatlas 919870327 Dec  1 23:59 shared/HITS.pool.root.1
[2025-12-02 00:04:11]  *** Contents of shared directory: ***
[2025-12-02 00:04:11] total 1313872
[2025-12-02 00:04:11] -rw-r--r--. 2 boincer umatlas 410951784 Dec  1 00:05 ATLAS.root_0
[2025-12-02 00:04:11] -rw-r--r--. 2 boincer umatlas    590103 Dec  1 00:05 input.tar.gz
[2025-12-02 00:04:11] -rw-r--r--. 2 boincer umatlas     15847 Dec  1 00:05 start_atlas.sh
[2025-12-02 00:04:11] -rw-------. 1 boincer umatlas 919870327 Dec  1 23:59 HITS.pool.root.1
[2025-12-02 00:04:11] -rw-------. 1 boincer umatlas  13957120 Dec  2 00:04 result.tar.gz
00:04:12 (3133024): run_atlas exited; CPU time 227759.126359
00:04:12 (3133024): called boinc_finish(0)

</stderr_txt>
]]>

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