Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:19 (2531043): wrapper (7.7.26015): starting
00:02:19 (2531043): wrapper: running run_atlas (--nthreads 9)
[2025-12-02 00:02:19] Arguments: --nthreads 9
[2025-12-02 00:02:19] Threads: 9
[2025-12-02 00:02:19] Checking for CVMFS
[2025-12-02 00:02:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 00:02:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 00:02:20] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 00:02:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 00:02:21] 2.13.3.0 11235 36548 225884 153544 2 304 23340943 32935936 33900 16776704 0 301764808 99.587 303968031 32839 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-02 00:02:21] CVMFS is ok
[2025-12-02 00:02:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 00:02:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 00:02:21] Further information can be found at the LHC@home message board.
[2025-12-02 00:02:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 00:02:21] Checking for apptainer binary...
[2025-12-02 00:02:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 00:02:21] Running /usr/bin/apptainer --version
[2025-12-02 00:02:21] apptainer version 1.4.4-1.el9
[2025-12-02 00:02:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 00:02:22] c7-2-37.aglt2.org
[2025-12-02 00:02:22] apptainer works
[2025-12-02 00:02:22] Set ATHENA_PROC_NUMBER=9
[2025-12-02 00:02:22] Set ATHENA_CORE_NUMBER=9
[2025-12-02 00:02:22] Starting ATLAS job with PandaID=6899133913
[2025-12-02 00:02:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 21:05:05]  *** The last 200 lines of the pilot log: ***
[2025-12-02 21:05:05] 2025-12-03 02:03:49,204 | INFO     | monitor loop #4348: job 0:6899133913 is in state 'finished'
[2025-12-02 21:05:05] 2025-12-03 02:03:49,204 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 21:05:05] 2025-12-03 02:03:50,176 | INFO     | time since job start (75641s) is within the limit (172800.0s)
[2025-12-02 21:05:05] 2025-12-03 02:03:51,708 | INFO     | monitor loop #4349: job 0:6899133913 is in state 'finished'
[2025-12-02 21:05:05] 2025-12-03 02:03:51,708 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 21:05:05] 2025-12-03 02:03:52,183 | INFO     | time since job start (75643s) is within the limit (172800.0s)
[2025-12-02 21:05:05] 2025-12-03 02:03:54,190 | INFO     | time since job start (75645s) is within the limit (172800.0s)
[2025-12-02 21:05:05] 2025-12-03 02:03:54,221 | INFO     | monitor loop #4350: job 0:6899133913 is in state 'finished'
[2025-12-02 21:05:05] 2025-12-03 02:03:54,221 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 21:05:05] 2025-12-03 02:03:56,221 | INFO     | time since job start (75647s) is within the limit (172800.0s)
[2025-12-02 21:05:05] 2025-12-03 02:03:56,757 | INFO     | monitor loop #4351: job 0:6899133913 is in state 'finished'
[2025-12-02 21:05:05] 2025-12-03 02:03:56,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 21:05:05] 2025-12-03 02:03:58,235 | INFO     | time since job start (75649s) is within the limit (172800.0s)
[2025-12-02 21:05:05] 2025-12-03 02:03:58,235 | INFO     | 75652s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-02 21:05:05] 2025-12-03 02:03:59,294 | INFO     | monitor loop #4352: job 0:6899133913 is in state 'finished'
[2025-12-02 21:05:05] 2025-12-03 02:03:59,294 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 21:05:05] 2025-12-03 02:04:00,005 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 21:05:05] 2025-12-03 02:04:00,072 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3325.6959270833336
[2025-12-02 21:05:05] 2025-12-03 02:04:00,095 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6899133913/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 21:05:05] 2025-12-03 02:04:00,095 | INFO     | extracted standard info from prmon json
[2025-12-02 21:05:05] 2025-12-03 02:04:00,096 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 21:05:05] 2025-12-03 02:04:00,096 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 21:05:05] 2025-12-03 02:04:00,122 | INFO     | fitting pss+swap vs Time
[2025-12-02 21:05:05] 2025-12-03 02:04:00,132 | INFO     | sum of square deviations: 588357350532.294
[2025-12-02 21:05:05] 2025-12-03 02:04:00,321 | INFO     | time since job start (75651s) is within the limit (172800.0s)
[2025-12-02 21:05:05] 2025-12-03 02:04:00,332 | INFO     | sum of deviations: 3713627849983.1694
[2025-12-02 21:05:05] 2025-12-03 02:04:00,332 | INFO     | mean x: 1764689651.5508885
[2025-12-02 21:05:05] 2025-12-03 02:04:00,332 | INFO     | mean y: 3571661.433764136
[2025-12-02 21:05:05] 2025-12-03 02:04:00,333 | INFO     | intersect: -11134898233.856123
[2025-12-02 21:05:05] 2025-12-03 02:04:00,333 | INFO     | chi2: 22.633852899667037
[2025-12-02 21:05:05] 2025-12-03 02:04:00,360 | INFO     | sum of square deviations: 581257790954.2493
[2025-12-02 21:05:05] 2025-12-03 02:04:00,524 | INFO     | sum of deviations: 4270124643025.0596
[2025-12-02 21:05:05] 2025-12-03 02:04:00,524 | INFO     | mean x: 1764689499.05515
[2025-12-02 21:05:05] 2025-12-03 02:04:00,524 | INFO     | mean y: 3583615.366585564
[2025-12-02 21:05:05] 2025-12-03 02:04:00,524 | INFO     | intersect: -12960447550.27513
[2025-12-02 21:05:05] 2025-12-03 02:04:00,532 | INFO     | chi2: 19.073414670135772
[2025-12-02 21:05:05] 2025-12-03 02:04:00,533 | INFO     | current chi2=19.073414670135772 (change=15.730588359455325 %)
[2025-12-02 21:05:05] 2025-12-03 02:04:00,533 | INFO     | right removable region: 1232
[2025-12-02 21:05:05] 2025-12-03 02:04:00,534 | INFO     | sum of square deviations: 581256997344.2498
[2025-12-02 21:05:05] 2025-12-03 02:04:00,721 | INFO     | sum of deviations: 3083127109118.5137
[2025-12-02 21:05:05] 2025-12-03 02:04:00,722 | INFO     | mean x: 1764689804.05515
[2025-12-02 21:05:05] 2025-12-03 02:04:00,722 | INFO     | mean y: 3585201.492295215
[2025-12-02 21:05:05] 2025-12-03 02:04:00,722 | INFO     | intersect: -9356754543.106388
[2025-12-02 21:05:05] 2025-12-03 02:04:00,723 | INFO     | chi2: 18.085798669881346
[2025-12-02 21:05:05] 2025-12-03 02:04:00,723 | INFO     | current chi2=18.085798669881346 (change=20.094034585921502 %)
[2025-12-02 21:05:05] 2025-12-03 02:04:00,723 | INFO     | left removable region: 10
[2025-12-02 21:05:05] 2025-12-03 02:04:00,724 | INFO     | sum of square deviations: 565838716906.3922
[2025-12-02 21:05:05] 2025-12-03 02:04:00,829 | INFO     | sum of deviations: 3144303098520.711
[2025-12-02 21:05:05] 2025-12-03 02:04:00,855 | INFO     | mean x: 1764689773.5646482
[2025-12-02 21:05:05] 2025-12-03 02:04:00,855 | INFO     | mean y: 3613209.275777414
[2025-12-02 21:05:05] 2025-12-03 02:04:00,855 | INFO     | intersect: -9802572470.777414
[2025-12-02 21:05:05] 2025-12-03 02:04:00,856 | INFO     | chi2: 9.49217886197665
[2025-12-02 21:05:05] 2025-12-03 02:04:00,856 | INFO     | current memory leak: 5.56 B/s (using 1222 data points, chi2=9.49)
[2025-12-02 21:05:05] 2025-12-03 02:04:00,857 | INFO     | could have reported an average CPU frequency of 3307 MHz (45 samples)
[2025-12-02 21:05:05] 2025-12-03 02:04:00,858 | INFO     | ..............................
[2025-12-02 21:05:05] 2025-12-03 02:04:00,858 | INFO     | . Timing measurements:
[2025-12-02 21:05:05] 2025-12-03 02:04:00,858 | INFO     | . get job = 0 s
[2025-12-02 21:05:05] 2025-12-03 02:04:00,858 | INFO     | . initial setup = 3 s
[2025-12-02 21:05:05] 2025-12-03 02:04:00,858 | INFO     | . payload setup = 51 s
[2025-12-02 21:05:05] 2025-12-03 02:04:00,858 | INFO     | . stage-in = 0 s
[2025-12-02 21:05:05] 2025-12-03 02:04:00,858 | INFO     | . payload execution = 75512 s
[2025-12-02 21:05:05] 2025-12-03 02:04:00,858 | INFO     | . stage-out = 10 s
[2025-12-02 21:05:05] 2025-12-03 02:04:00,858 | INFO     | . log creation = 1 s
[2025-12-02 21:05:05] 2025-12-03 02:04:00,858 | INFO     | ..............................
[2025-12-02 21:05:05] 2025-12-03 02:04:01,620 | INFO     | 
[2025-12-02 21:05:05] 2025-12-03 02:04:01,620 | INFO     | job summary report
[2025-12-02 21:05:05] 2025-12-03 02:04:01,620 | INFO     | --------------------------------------------------
[2025-12-02 21:05:05] 2025-12-03 02:04:01,620 | INFO     | PanDA job id: 6899133913
[2025-12-02 21:05:05] 2025-12-03 02:04:01,620 | INFO     | task id: 47531058
[2025-12-02 21:05:05] 2025-12-03 02:04:01,620 | INFO     | errors: (none)
[2025-12-02 21:05:05] 2025-12-03 02:04:01,620 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 21:05:05] 2025-12-03 02:04:01,620 | INFO     | pilot state: finished 
[2025-12-02 21:05:05] 2025-12-03 02:04:01,620 | INFO     | transexitcode: 0
[2025-12-02 21:05:05] 2025-12-03 02:04:01,620 | INFO     | exeerrorcode: 0
[2025-12-02 21:05:05] 2025-12-03 02:04:01,620 | INFO     | exeerrordiag: 
[2025-12-02 21:05:05] 2025-12-03 02:04:01,620 | INFO     | exitcode: 0
[2025-12-02 21:05:05] 2025-12-03 02:04:01,621 | INFO     | exitmsg: OK
[2025-12-02 21:05:05] 2025-12-03 02:04:01,621 | INFO     | cpuconsumptiontime: 160918 s
[2025-12-02 21:05:05] 2025-12-03 02:04:01,621 | INFO     | nevents: 1000
[2025-12-02 21:05:05] 2025-12-03 02:04:01,621 | INFO     | neventsw: 0
[2025-12-02 21:05:05] 2025-12-03 02:04:01,621 | INFO     | pid: 2573983
[2025-12-02 21:05:05] 2025-12-03 02:04:01,621 | INFO     | pgrp: 2573983
[2025-12-02 21:05:05] 2025-12-03 02:04:01,621 | INFO     | corecount: 9
[2025-12-02 21:05:05] 2025-12-03 02:04:01,621 | INFO     | event service: False
[2025-12-02 21:05:05] 2025-12-03 02:04:01,621 | INFO     | sizes: {0: 2284453, 11: 2284453, 20: 2284743, 22: 2284771, 75569: 2363360, 75570: 2363359, 75581: 2372537, 75583: 2372593, 75606: 2372839}
[2025-12-02 21:05:05] 2025-12-03 02:04:01,621 | INFO     | --------------------------------------------------
[2025-12-02 21:05:05] 2025-12-03 02:04:01,621 | INFO     | 
[2025-12-02 21:05:05] 2025-12-03 02:04:01,621 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-02 21:05:05] 2025-12-03 02:04:01,686 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 21:05:05] 2025-12-03 02:04:01,687 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 21:05:05] 2025-12-03 02:04:01,687 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 21:05:05] 2025-12-03 02:04:01,691 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 21:05:05] 2025-12-03 02:04:01,692 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 21:05:05] 2025-12-03 02:04:01,692 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 21:05:05] 2025-12-03 02:04:01,692 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 21:05:05] 2025-12-03 02:04:01,692 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 21:05:05] 2025-12-03 02:04:01,692 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 21:05:05] 2025-12-03 02:04:01,692 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 21:05:05] 2025-12-03 02:04:01,692 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 21:05:05] 2025-12-03 02:04:01,692 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 21:05:05] 2025-12-03 02:04:01,692 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 21:05:05] 2025-12-03 02:04:01,692 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 21:05:05] 2025-12-03 02:04:01,692 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 21:05:05] 2025-12-03 02:04:01,692 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 21:05:05] 2025-12-03 02:04:01,693 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 21:05:05] 2025-12-03 02:04:01,693 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 21:05:05] 2025-12-03 02:04:01,693 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 21:05:05] 2025-12-03 02:04:01,693 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 21:05:05] 2025-12-03 02:04:01,693 | INFO     | job 6899133913 has completed (purged errors)
[2025-12-02 21:05:05] 2025-12-03 02:04:01,693 | INFO     | overall cleanup function is called
[2025-12-02 21:05:05] 2025-12-03 02:04:02,714 | INFO     | --- collectZombieJob: --- 10, [2573983]
[2025-12-02 21:05:05] 2025-12-03 02:04:02,714 | INFO     | zombie collector waiting for pid 2573983
[2025-12-02 21:05:05] 2025-12-03 02:04:02,714 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 21:05:05] 2025-12-03 02:04:02,714 | INFO     | collected zombie processes
[2025-12-02 21:05:05] 2025-12-03 02:04:02,714 | INFO     | will attempt to kill all subprocesses of pid=2573983
[2025-12-02 21:05:05] 2025-12-03 02:04:08,337 | INFO     | process IDs to be killed: [2573983] (in reverse order)
[2025-12-02 21:05:05] 2025-12-03 02:04:09,109 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 21:05:05] 2025-12-03 02:04:09,110 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 21:05:05] 2025-12-03 02:04:09,690 | INFO     | did not find any defunct processes belonging to 2573983
[2025-12-02 21:05:05] 2025-12-03 02:04:09,764 | INFO     | did not find any defunct processes belonging to 2573983
[2025-12-02 21:05:05] 2025-12-03 02:04:09,800 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 21:05:05] 2025-12-03 02:04:09,800 | INFO     | ready for new job
[2025-12-02 21:05:05] 2025-12-03 02:04:09,800 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 21:05:05] 2025-12-03 02:04:09,842 | INFO     | ***************************************
[2025-12-02 21:05:05] 2025-12-03 02:04:09,842 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 21:05:05] 2025-12-03 02:04:09,842 | INFO     | ***************************************
[2025-12-02 21:05:05] 2025-12-03 02:04:09,842 | INFO     | 
[2025-12-02 21:05:05] 2025-12-03 02:04:09,947 | INFO     | architecture information:
[2025-12-02 21:05:05] 2025-12-03 02:04:09,953 | INFO     | executing command: cat /etc/os-release
[2025-12-02 21:05:05] 2025-12-03 02:04:10,044 | INFO     | cat /etc/os-release:
[2025-12-02 21:05:05] NAME="CentOS Linux"
[2025-12-02 21:05:05] VERSION="7 (Core)"
[2025-12-02 21:05:05] ID="centos"
[2025-12-02 21:05:05] ID_LIKE="rhel fedora"
[2025-12-02 21:05:05] VERSION_ID="7"
[2025-12-02 21:05:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 21:05:05] ANSI_COLOR="0;31"
[2025-12-02 21:05:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 21:05:05] HOME_URL="https://www.centos.org/"
[2025-12-02 21:05:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 21:05:05] 
[2025-12-02 21:05:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 21:05:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 21:05:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 21:05:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 21:05:05] 
[2025-12-02 21:05:05] 2025-12-03 02:04:10,045 | INFO     | ***************************************
[2025-12-02 21:05:05] 2025-12-03 02:04:10,573 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-02 21:05:05] 2025-12-03 02:04:10,707 | INFO     | sufficient remaining disk space (70204260352 B)
[2025-12-02 21:05:05] 2025-12-03 02:04:10,708 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 21:05:05] 2025-12-03 02:04:10,708 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 21:05:05] 2025-12-03 02:04:10,708 | INFO     | update_server=False
[2025-12-02 21:05:05] 2025-12-03 02:04:10,708 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 21:05:05] 2025-12-03 02:04:10,708 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 21:05:05] 2025-12-03 02:04:10,711 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 21:05:05] 2025-12-03 02:04:10,711 | INFO     | aborting loop
[2025-12-02 21:05:05] 2025-12-03 02:04:10,833 | INFO     | all payload control threads have been joined
[2025-12-02 21:05:05] 2025-12-03 02:04:10,870 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 21:05:05] 2025-12-03 02:04:10,955 | INFO     | all job control threads have been joined
[2025-12-02 21:05:05] 2025-12-03 02:04:10,955 | INFO     | all data control threads have been joined
[2025-12-02 21:05:05] 2025-12-03 02:04:11,717 | INFO     | [job] job monitor thread has finished
[2025-12-02 21:05:05] 2025-12-03 02:04:11,743 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 21:05:05] 2025-12-03 02:04:11,747 | INFO     | [job] retrieve thread has finished
[2025-12-02 21:05:05] 2025-12-03 02:04:11,816 | INFO     | [payload] failed_post thread has finished
[2025-12-02 21:05:05] 2025-12-03 02:04:11,816 | INFO     | [payload] validate_post thread has finished
[2025-12-02 21:05:05] 2025-12-03 02:04:11,839 | INFO     | [payload] control thread has finished
[2025-12-02 21:05:05] 2025-12-03 02:04:11,910 | INFO     | [job] queue monitor thread has finished
[2025-12-02 21:05:05] 2025-12-03 02:04:11,961 | INFO     | [job] control thread has finished
[2025-12-02 21:05:05] 2025-12-03 02:04:11,968 | INFO     | [data] control thread has finished
[2025-12-02 21:05:05] 2025-12-03 02:04:12,199 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 21:05:05] 2025-12-03 02:04:12,223 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 21:05:05] 2025-12-03 02:04:12,417 | INFO     | [data] copytool_in thread has finished
[2025-12-02 21:05:05] 2025-12-03 02:04:12,420 | INFO     | [job] validate thread has finished
[2025-12-02 21:05:05] 2025-12-03 02:04:12,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 21:05:05] 2025-12-03 02:04:12,718 | INFO     | [data] copytool_out thread has finished
[2025-12-02 21:05:05] 2025-12-03 02:04:13,229 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 21:05:05] 2025-12-03 02:04:16,486 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 21:05:05] 2025-12-03 02:04:22,350 | INFO     | [monitor] cgroup control has ended
[2025-12-02 21:05:05] 2025-12-03 02:04:24,474 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140099771373376)>', '<ExcThread(monitor, started 140099132053248)>']
[2025-12-02 21:05:05] 2025-12-03 02:04:29,502 | INFO     | all workflow threads have been joined
[2025-12-02 21:05:05] 2025-12-03 02:04:29,502 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 21:05:05] 2025-12-03 02:04:29,502 | INFO     | traces error code: 0
[2025-12-02 21:05:05] 2025-12-03 02:04:29,502 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 21:05:05] 2025-12-03 02:04:43,081 | INFO     | PID=2543563 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 21:05:05] 2025-12-03 02:04:43,081 | INFO     | .. there are 73 such processes running
[2025-12-02 21:05:05] 2025-12-03 02:04:43,082 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 21:05:05] 2025-12-03 02:04:43,082 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 21:05:05] 2025-12-03 02:04:43,082 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 21:05:05] 2025-12-03 02:04:43,082 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 21:05:05] 2025-12-03 02:04:43,082 | INFO     | [monitor] control thread has ended
[2025-12-02 21:05:05] 2025-12-03 02:04:43,368 [wrapper] ==== pilot stdout END ====
[2025-12-02 21:05:05] 2025-12-03 02:04:43,379 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 21:05:05] 2025-12-03 02:04:43,384 [wrapper] pilotpid: 2543563
[2025-12-02 21:05:05] 2025-12-03 02:04:43,392 [wrapper] Pilot exit status: 0
[2025-12-02 21:05:05] 2025-12-03 02:04:43,453 [wrapper] pandaids: 6899133913
[2025-12-02 21:05:05] 2025-12-03 02:04:43,608 [wrapper] cleanup supervisor_pilot 1269758 2543564
[2025-12-02 21:05:05] 2025-12-03 02:04:43,645 [wrapper] Test setup, not cleaning
[2025-12-02 21:05:05] 2025-12-03 02:04:43,720 [wrapper] apfmon messages muted
[2025-12-02 21:05:05] 2025-12-03 02:04:43,788 [wrapper] ==== wrapper stdout END ====
[2025-12-02 21:05:05] 2025-12-03 02:04:43,813 [wrapper] ==== wrapper stderr END ====
[2025-12-02 21:05:05]  *** Error codes and diagnostics ***
[2025-12-02 21:05:05]     "exeErrorCode": 0,
[2025-12-02 21:05:05]     "exeErrorDiag": "",
[2025-12-02 21:05:05]     "pilotErrorCode": 0,
[2025-12-02 21:05:05]     "pilotErrorDiag": "",
[2025-12-02 21:05:05]  *** Listing of results directory ***
[2025-12-02 21:05:05] total 1068712
[2025-12-02 21:05:05] -rw-r--r--. 1 boincer umatlas    576529 Nov 28 17:41 pilot3.tar.gz
[2025-12-02 21:05:05] -rwx------. 1 boincer umatlas     36292 Nov 28 17:46 runpilot2-wrapper.sh
[2025-12-02 21:05:05] -rw-r--r--. 1 boincer umatlas      5112 Nov 28 17:49 queuedata.json
[2025-12-02 21:05:05] -rw-r--r--. 1 boincer umatlas       100 Dec  2 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 21:05:05] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 00:02 run_atlas
[2025-12-02 21:05:05] -rw-r--r--. 1 boincer umatlas       105 Dec  2 00:02 job.xml
[2025-12-02 21:05:05] -rw-r--r--. 2 boincer umatlas 373437960 Dec  2 00:02 EVNT.47531050._000509.pool.root.1
[2025-12-02 21:05:05] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 00:02 shared
[2025-12-02 21:05:05] -rw-r--r--. 2 boincer umatlas    590125 Dec  2 00:02 input.tar.gz
[2025-12-02 21:05:05] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 00:02 start_atlas.sh
[2025-12-02 21:05:05] -rw-r--r--. 1 boincer umatlas         0 Dec  2 00:02 boinc_lockfile
[2025-12-02 21:05:05] -rw-r--r--. 1 boincer umatlas      2880 Dec  2 00:02 pandaJob.out
[2025-12-02 21:05:05] -rw-------. 1 boincer umatlas        57 Dec  2 00:02 setup.sh.local
[2025-12-02 21:05:05] -rw-------. 1 boincer umatlas    992001 Dec  2 00:03 agis_schedconf.cvmfs.json
[2025-12-02 21:05:05] drwx------. 5 boincer umatlas      4096 Dec  2 00:03 pilot3
[2025-12-02 21:05:05] -rw-r--r--. 1 boincer umatlas       533 Dec  2 20:28 boinc_task_state.xml
[2025-12-02 21:05:05] -rw-------. 1 boincer umatlas 693229241 Dec  2 21:02 HITS.47531058._001264.pool.root.1
[2025-12-02 21:05:05] -rw-------. 1 boincer umatlas      1060 Dec  2 21:03 memory_monitor_summary.json
[2025-12-02 21:05:05] -rw-------. 1 boincer umatlas   1516240 Dec  2 21:03 agis_ddmendpoints.agis.ALL.json
[2025-12-02 21:05:05] -rw-------. 1 boincer umatlas   2510748 Dec  2 21:03 log.47531058._001264.job.log.tgz.1
[2025-12-02 21:05:05] -rw-------. 1 boincer umatlas     27725 Dec  2 21:04 heartbeat.json
[2025-12-02 21:05:05] -rw-r--r--. 1 boincer umatlas      6946 Dec  2 21:04 init_data.xml
[2025-12-02 21:05:05] -rw-------. 1 boincer umatlas        95 Dec  2 21:04 pilot_heartbeat.json
[2025-12-02 21:05:05] -rw-------. 1 boincer umatlas       823 Dec  2 21:04 pilotlog.txt
[2025-12-02 21:05:05] -rw-------. 1 boincer umatlas   9355498 Dec  2 21:04 log.47531058._001264.job.log.1
[2025-12-02 21:05:05] -rw-------. 1 boincer umatlas       353 Dec  2 21:04 output.list
[2025-12-02 21:05:05] -rw-r--r--. 1 boincer umatlas       620 Dec  2 21:04 runtime_log
[2025-12-02 21:05:05] -rw-------. 1 boincer umatlas  11909120 Dec  2 21:04 result.tar.gz
[2025-12-02 21:05:05] -rw-r--r--. 1 boincer umatlas      9338 Dec  2 21:04 runtime_log.err
[2025-12-02 21:05:05] -rw-------. 1 boincer umatlas       663 Dec  2 21:04 NjuNDmZPMj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1uOKDmcRvDEm.diag
[2025-12-02 21:05:05] -rw-r--r--. 1 boincer umatlas        29 Dec  2 21:05 wrapper_checkpoint.txt
[2025-12-02 21:05:05] -rw-r--r--. 1 boincer umatlas      8192 Dec  2 21:05 boinc_mmap_file
[2025-12-02 21:05:05] -rw-r--r--. 1 boincer umatlas     21806 Dec  2 21:05 stderr.txt
[2025-12-02 21:05:05] HITS file was successfully produced:
[2025-12-02 21:05:05] -rw-------. 1 boincer umatlas 693229241 Dec  2 21:02 shared/HITS.pool.root.1
[2025-12-02 21:05:05]  *** Contents of shared directory: ***
[2025-12-02 21:05:05] total 1053908
[2025-12-02 21:05:05] -rw-r--r--. 2 boincer umatlas 373437960 Dec  2 00:02 ATLAS.root_0
[2025-12-02 21:05:05] -rw-r--r--. 2 boincer umatlas    590125 Dec  2 00:02 input.tar.gz
[2025-12-02 21:05:05] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 00:02 start_atlas.sh
[2025-12-02 21:05:05] -rw-------. 1 boincer umatlas 693229241 Dec  2 21:02 HITS.pool.root.1
[2025-12-02 21:05:05] -rw-------. 1 boincer umatlas  11909120 Dec  2 21:04 result.tar.gz
21:05:07 (2531043): run_atlas exited; CPU time 163189.188435
21:05:07 (2531043): called boinc_finish(0)

</stderr_txt>
]]>

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