Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:36:13 (16296): wrapper (7.7.26015): starting
02:36:13 (16296): wrapper: running run_atlas (--nthreads 8)
[2025-12-03 02:36:13] Arguments: --nthreads 8
[2025-12-03 02:36:13] Threads: 8
[2025-12-03 02:36:13] Checking for CVMFS
[2025-12-03 02:36:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 02:36:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 02:36:15] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 02:36:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 02:36:16] 2.11.2.0 1038 181603 136088 153576 3 85 15054044 25165825 2066 130560 10 60235938 99.888 30122803 2186 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-03 02:36:16] CVMFS is ok
[2025-12-03 02:36:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 02:36:16] Checking for apptainer binary...
[2025-12-03 02:36:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-03 02:36:16] Running /usr/bin/apptainer --version
[2025-12-03 02:36:16] apptainer version 1.3.2-1.el7
[2025-12-03 02:36:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 02:36:34] cg-vwn304.simple-grid.lan
[2025-12-03 02:36:34] apptainer works
[2025-12-03 02:36:34] Set ATHENA_PROC_NUMBER=8
[2025-12-03 02:36:34] Set ATHENA_CORE_NUMBER=8
[2025-12-03 02:36:34] Starting ATLAS job with PandaID=6897914527
[2025-12-03 02:36:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 22:26:00]  *** The last 200 lines of the pilot log: ***
[2025-12-03 22:26:00] 2025-12-03 21:25:14,627 | INFO     | monitor loop #4821: job 0:6897914527 is in state 'finished'
[2025-12-03 22:26:00] 2025-12-03 21:25:14,627 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 22:26:00] 2025-12-03 21:25:14,698 | INFO     | time since job start (71080s) is within the limit (172800.0s)
[2025-12-03 22:26:00] 2025-12-03 21:25:16,705 | INFO     | time since job start (71082s) is within the limit (172800.0s)
[2025-12-03 22:26:00] 2025-12-03 21:25:17,136 | INFO     | monitor loop #4822: job 0:6897914527 is in state 'finished'
[2025-12-03 22:26:00] 2025-12-03 21:25:17,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 22:26:00] 2025-12-03 21:25:18,713 | INFO     | time since job start (71084s) is within the limit (172800.0s)
[2025-12-03 22:26:00] 2025-12-03 21:25:19,641 | INFO     | monitor loop #4823: job 0:6897914527 is in state 'finished'
[2025-12-03 22:26:00] 2025-12-03 21:25:19,641 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 22:26:00] 2025-12-03 21:25:20,727 | INFO     | time since job start (71086s) is within the limit (172800.0s)
[2025-12-03 22:26:00] 2025-12-03 21:25:20,727 | INFO     | 71093s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-03 22:26:00] 2025-12-03 21:25:22,148 | INFO     | monitor loop #4824: job 0:6897914527 is in state 'finished'
[2025-12-03 22:26:00] 2025-12-03 21:25:22,148 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 22:26:00] 2025-12-03 21:25:22,735 | INFO     | time since job start (71088s) is within the limit (172800.0s)
[2025-12-03 22:26:00] 2025-12-03 21:25:23,603 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-03 22:26:00] 2025-12-03 21:25:23,606 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.9959999999996
[2025-12-03 22:26:00] 2025-12-03 21:25:23,613 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6897914527/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 22:26:00] 2025-12-03 21:25:23,613 | INFO     | extracted standard info from prmon json
[2025-12-03 22:26:00] 2025-12-03 21:25:23,614 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 22:26:00] 2025-12-03 21:25:23,614 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 22:26:00] 2025-12-03 21:25:23,640 | INFO     | fitting pss+swap vs Time
[2025-12-03 22:26:00] 2025-12-03 21:25:23,642 | INFO     | sum of square deviations: 482755382960.6513
[2025-12-03 22:26:00] 2025-12-03 21:25:23,695 | INFO     | sum of deviations: 1477802022277.2065
[2025-12-03 22:26:00] 2025-12-03 21:25:23,696 | INFO     | mean x: 1764761688.0612597
[2025-12-03 22:26:00] 2025-12-03 21:25:23,696 | INFO     | mean y: 3346694.011216566
[2025-12-03 22:26:00] 2025-12-03 21:25:23,696 | INFO     | intersect: -5398909776.874865
[2025-12-03 22:26:00] 2025-12-03 21:25:23,697 | INFO     | chi2: 16.396824917730672
[2025-12-03 22:26:00] 2025-12-03 21:25:23,699 | INFO     | sum of square deviations: 476534739137.4947
[2025-12-03 22:26:00] 2025-12-03 21:25:23,748 | INFO     | sum of deviations: 1963421603930.581
[2025-12-03 22:26:00] 2025-12-03 21:25:23,749 | INFO     | mean x: 1764761535.565858
[2025-12-03 22:26:00] 2025-12-03 21:25:23,749 | INFO     | mean y: 3358597.4462738303
[2025-12-03 22:26:00] 2025-12-03 21:25:23,749 | INFO     | intersect: -7267823627.352584
[2025-12-03 22:26:00] 2025-12-03 21:25:23,750 | INFO     | chi2: 12.680140708874411
[2025-12-03 22:26:00] 2025-12-03 21:25:23,751 | INFO     | current chi2=12.680140708874411 (change=22.667096998988093 %)
[2025-12-03 22:26:00] 2025-12-03 21:25:23,751 | INFO     | right removable region: 1153
[2025-12-03 22:26:00] 2025-12-03 21:25:23,752 | INFO     | sum of square deviations: 476533988837.4948
[2025-12-03 22:26:00] 2025-12-03 21:25:23,793 | INFO     | sum of deviations: 996982635716.6656
[2025-12-03 22:26:00] 2025-12-03 21:25:23,793 | INFO     | mean x: 1764761840.565858
[2025-12-03 22:26:00] 2025-12-03 21:25:23,793 | INFO     | mean y: 3358474.925476603
[2025-12-03 22:26:00] 2025-12-03 21:25:23,793 | INFO     | intersect: -3688795605.2308865
[2025-12-03 22:26:00] 2025-12-03 21:25:23,795 | INFO     | chi2: 13.10094075152429
[2025-12-03 22:26:00] 2025-12-03 21:25:23,795 | INFO     | current chi2=13.10094075152429 (change=20.100746228267553 %)
[2025-12-03 22:26:00] 2025-12-03 21:25:23,795 | INFO     | left removable region: 10
[2025-12-03 22:26:00] 2025-12-03 21:25:23,797 | INFO     | sum of square deviations: 463036851979.2596
[2025-12-03 22:26:00] 2025-12-03 21:25:23,837 | INFO     | sum of deviations: 1466304534070.134
[2025-12-03 22:26:00] 2025-12-03 21:25:23,837 | INFO     | mean x: 1764761810.070866
[2025-12-03 22:26:00] 2025-12-03 21:25:23,837 | INFO     | mean y: 3376387.6526684165
[2025-12-03 22:26:00] 2025-12-03 21:25:23,838 | INFO     | intersect: -5585116693.620775
[2025-12-03 22:26:00] 2025-12-03 21:25:23,839 | INFO     | chi2: 8.171335495047936
[2025-12-03 22:26:00] 2025-12-03 21:25:23,839 | INFO     | current memory leak: 3.17 B/s (using 1143 data points, chi2=8.17)
[2025-12-03 22:26:00] 2025-12-03 21:25:23,841 | INFO     | could have reported an average CPU frequency of 1999 MHz (40 samples)
[2025-12-03 22:26:00] 2025-12-03 21:25:23,841 | INFO     | ..............................
[2025-12-03 22:26:00] 2025-12-03 21:25:23,841 | INFO     | . Timing measurements:
[2025-12-03 22:26:00] 2025-12-03 21:25:23,841 | INFO     | . get job = 0 s
[2025-12-03 22:26:00] 2025-12-03 21:25:23,841 | INFO     | . initial setup = 6 s
[2025-12-03 22:26:00] 2025-12-03 21:25:23,841 | INFO     | . payload setup = 139 s
[2025-12-03 22:26:00] 2025-12-03 21:25:23,841 | INFO     | . stage-in = 0 s
[2025-12-03 22:26:00] 2025-12-03 21:25:23,841 | INFO     | . payload execution = 70703 s
[2025-12-03 22:26:00] 2025-12-03 21:25:23,842 | INFO     | . stage-out = 4 s
[2025-12-03 22:26:00] 2025-12-03 21:25:23,842 | INFO     | . log creation = 1 s
[2025-12-03 22:26:00] 2025-12-03 21:25:23,842 | INFO     | ..............................
[2025-12-03 22:26:00] 2025-12-03 21:25:23,964 | INFO     | 
[2025-12-03 22:26:00] 2025-12-03 21:25:23,964 | INFO     | job summary report
[2025-12-03 22:26:00] 2025-12-03 21:25:23,964 | INFO     | --------------------------------------------------
[2025-12-03 22:26:00] 2025-12-03 21:25:23,965 | INFO     | PanDA job id: 6897914527
[2025-12-03 22:26:00] 2025-12-03 21:25:23,965 | INFO     | task id: 47538121
[2025-12-03 22:26:00] 2025-12-03 21:25:23,965 | INFO     | errors: (none)
[2025-12-03 22:26:00] 2025-12-03 21:25:23,965 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 22:26:00] 2025-12-03 21:25:23,965 | INFO     | pilot state: finished 
[2025-12-03 22:26:00] 2025-12-03 21:25:23,965 | INFO     | transexitcode: 0
[2025-12-03 22:26:00] 2025-12-03 21:25:23,965 | INFO     | exeerrorcode: 0
[2025-12-03 22:26:00] 2025-12-03 21:25:23,965 | INFO     | exeerrordiag: 
[2025-12-03 22:26:00] 2025-12-03 21:25:23,965 | INFO     | exitcode: 0
[2025-12-03 22:26:00] 2025-12-03 21:25:23,965 | INFO     | exitmsg: OK
[2025-12-03 22:26:00] 2025-12-03 21:25:23,965 | INFO     | cpuconsumptiontime: 264006 s
[2025-12-03 22:26:00] 2025-12-03 21:25:23,965 | INFO     | nevents: 1000
[2025-12-03 22:26:00] 2025-12-03 21:25:23,966 | INFO     | neventsw: 0
[2025-12-03 22:26:00] 2025-12-03 21:25:23,966 | INFO     | pid: 27328
[2025-12-03 22:26:00] 2025-12-03 21:25:23,966 | INFO     | pgrp: 27328
[2025-12-03 22:26:00] 2025-12-03 21:25:23,966 | INFO     | corecount: 8
[2025-12-03 22:26:00] 2025-12-03 21:25:23,966 | INFO     | event service: False
[2025-12-03 22:26:00] 2025-12-03 21:25:23,966 | INFO     | sizes: {0: 2284274, 1: 2284473, 2: 2284473, 12: 2284501, 23: 2284529, 34: 2284557, 44: 2284713, 55: 2284741, 66: 2284769, 72: 2285059, 77: 2285087, 70843: 2356015,
[2025-12-03 22:26:00] 2025-12-03 21:25:23,966 | INFO     | --------------------------------------------------
[2025-12-03 22:26:00] 2025-12-03 21:25:23,966 | INFO     | 
[2025-12-03 22:26:00] 2025-12-03 21:25:23,966 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-12-03 22:26:00] 2025-12-03 21:25:24,175 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 22:26:00] 2025-12-03 21:25:24,175 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 22:26:00] 2025-12-03 21:25:24,175 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 22:26:00] 2025-12-03 21:25:24,175 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 22:26:00] 2025-12-03 21:25:24,175 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 22:26:00] 2025-12-03 21:25:24,175 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 22:26:00] 2025-12-03 21:25:24,175 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 22:26:00] 2025-12-03 21:25:24,176 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 22:26:00] 2025-12-03 21:25:24,176 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 22:26:00] 2025-12-03 21:25:24,176 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 22:26:00] 2025-12-03 21:25:24,176 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 22:26:00] 2025-12-03 21:25:24,176 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 22:26:00] 2025-12-03 21:25:24,176 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 22:26:00] 2025-12-03 21:25:24,176 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 22:26:00] 2025-12-03 21:25:24,176 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 22:26:00] 2025-12-03 21:25:24,176 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 22:26:00] 2025-12-03 21:25:24,176 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 22:26:00] 2025-12-03 21:25:24,176 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 22:26:00] 2025-12-03 21:25:24,176 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 22:26:00] 2025-12-03 21:25:24,177 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 22:26:00] 2025-12-03 21:25:24,177 | INFO     | job 6897914527 has completed (purged errors)
[2025-12-03 22:26:00] 2025-12-03 21:25:24,177 | INFO     | overall cleanup function is called
[2025-12-03 22:26:00] 2025-12-03 21:25:25,193 | INFO     | --- collectZombieJob: --- 10, [27328]
[2025-12-03 22:26:00] 2025-12-03 21:25:25,193 | INFO     | zombie collector waiting for pid 27328
[2025-12-03 22:26:00] 2025-12-03 21:25:25,193 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 22:26:00] 2025-12-03 21:25:25,193 | INFO     | collected zombie processes
[2025-12-03 22:26:00] 2025-12-03 21:25:25,193 | INFO     | will attempt to kill all subprocesses of pid=27328
[2025-12-03 22:26:00] 2025-12-03 21:25:25,302 | INFO     | process IDs to be killed: [27328] (in reverse order)
[2025-12-03 22:26:00] 2025-12-03 21:25:26,062 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 22:26:00] 2025-12-03 21:25:26,062 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 22:26:00] 2025-12-03 21:25:26,066 | INFO     | did not find any defunct processes belonging to 27328
[2025-12-03 22:26:00] 2025-12-03 21:25:26,068 | INFO     | did not find any defunct processes belonging to 27328
[2025-12-03 22:26:00] 2025-12-03 21:25:26,116 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 22:26:00] 2025-12-03 21:25:26,116 | INFO     | ready for new job
[2025-12-03 22:26:00] 2025-12-03 21:25:26,116 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 22:26:00] 2025-12-03 21:25:26,121 | INFO     | ***************************************
[2025-12-03 22:26:00] 2025-12-03 21:25:26,121 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 22:26:00] 2025-12-03 21:25:26,121 | INFO     | ***************************************
[2025-12-03 22:26:00] 2025-12-03 21:25:26,121 | INFO     | 
[2025-12-03 22:26:00] 2025-12-03 21:25:26,122 | INFO     | pilot is running in a VM
[2025-12-03 22:26:00] 2025-12-03 21:25:26,122 | INFO     | architecture information:
[2025-12-03 22:26:00] 2025-12-03 21:25:26,132 | INFO     | executing command: cat /etc/os-release
[2025-12-03 22:26:00] 2025-12-03 21:25:26,397 | INFO     | cat /etc/os-release:
[2025-12-03 22:26:00] NAME="CentOS Linux"
[2025-12-03 22:26:00] VERSION="7 (Core)"
[2025-12-03 22:26:00] ID="centos"
[2025-12-03 22:26:00] ID_LIKE="rhel fedora"
[2025-12-03 22:26:00] VERSION_ID="7"
[2025-12-03 22:26:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 22:26:00] ANSI_COLOR="0;31"
[2025-12-03 22:26:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 22:26:00] HOME_URL="https://www.centos.org/"
[2025-12-03 22:26:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 22:26:00] 
[2025-12-03 22:26:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 22:26:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 22:26:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 22:26:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 22:26:00] 
[2025-12-03 22:26:00] 2025-12-03 21:25:26,397 | INFO     | ***************************************
[2025-12-03 22:26:00] 2025-12-03 21:25:26,901 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-12-03 22:26:00] 2025-12-03 21:25:27,126 | INFO     | sufficient remaining disk space (494222180352 B)
[2025-12-03 22:26:00] 2025-12-03 21:25:27,127 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 22:26:00] 2025-12-03 21:25:27,127 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 22:26:00] 2025-12-03 21:25:27,127 | INFO     | update_server=False
[2025-12-03 22:26:00] 2025-12-03 21:25:27,127 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 22:26:00] 2025-12-03 21:25:27,128 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 22:26:00] 2025-12-03 21:25:27,162 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-03 22:26:00] 2025-12-03 21:25:27,162 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-03 22:26:00] 2025-12-03 21:25:27,162 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 22:26:00] 2025-12-03 21:25:27,162 | INFO     | will abort loop
[2025-12-03 22:26:00] 2025-12-03 21:25:27,514 | INFO     | all payload control threads have been joined
[2025-12-03 22:26:00] 2025-12-03 21:25:27,652 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 22:26:00] 2025-12-03 21:25:28,133 | INFO     | [job] retrieve thread has finished
[2025-12-03 22:26:00] 2025-12-03 21:25:28,168 | INFO     | [job] job monitor thread has finished
[2025-12-03 22:26:00] 2025-12-03 21:25:28,195 | INFO     | all data control threads have been joined
[2025-12-03 22:26:00] 2025-12-03 21:25:28,293 | INFO     | [payload] validate_post thread has finished
[2025-12-03 22:26:00] 2025-12-03 21:25:28,519 | INFO     | [payload] control thread has finished
[2025-12-03 22:26:00] 2025-12-03 21:25:28,616 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 22:26:00] 2025-12-03 21:25:28,804 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 22:26:00] 2025-12-03 21:25:28,833 | INFO     | all job control threads have been joined
[2025-12-03 22:26:00] 2025-12-03 21:25:28,979 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 22:26:00] 2025-12-03 21:25:29,057 | INFO     | [data] copytool_in thread has finished
[2025-12-03 22:26:00] 2025-12-03 21:25:29,135 | INFO     | [data] copytool_out thread has finished
[2025-12-03 22:26:00] 2025-12-03 21:25:29,201 | INFO     | [data] control thread has finished
[2025-12-03 22:26:00] 2025-12-03 21:25:29,219 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 22:26:00] 2025-12-03 21:25:29,261 | INFO     | [payload] failed_post thread has finished
[2025-12-03 22:26:00] 2025-12-03 21:25:29,373 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 22:26:00] 2025-12-03 21:25:29,473 | INFO     | [job] validate thread has finished
[2025-12-03 22:26:00] 2025-12-03 21:25:29,839 | INFO     | [job] control thread has finished
[2025-12-03 22:26:00] 2025-12-03 21:25:29,985 | INFO     | [job] queue monitor thread has finished
[2025-12-03 22:26:00] 2025-12-03 21:25:31,661 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 22:26:00] 2025-12-03 21:25:37,001 | INFO     | [monitor] cgroup control has ended
[2025-12-03 22:26:00] 2025-12-03 21:25:37,113 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140696283662144)>', '<ExcThread(monitor, started 140695830501120)>']
[2025-12-03 22:26:00] 2025-12-03 21:25:42,139 | INFO     | all workflow threads have been joined
[2025-12-03 22:26:00] 2025-12-03 21:25:42,139 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 22:26:00] 2025-12-03 21:25:42,139 | INFO     | traces error code: 0
[2025-12-03 22:26:00] 2025-12-03 21:25:42,140 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 22:26:00] 2025-12-03 21:25:55,986 | INFO     | PID=20086 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-03 22:26:00] 2025-12-03 21:25:55,986 | INFO     | .. there are 9 such processes running
[2025-12-03 22:26:00] 2025-12-03 21:25:55,986 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 22:26:00] 2025-12-03 21:25:55,986 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 22:26:00] 2025-12-03 21:25:55,986 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 22:26:00] 2025-12-03 21:25:55,986 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 22:26:00] 2025-12-03 21:25:55,987 | INFO     | [monitor] control thread has ended
[2025-12-03 22:26:00] 2025-12-03 21:25:56,284 [wrapper] ==== pilot stdout END ====
[2025-12-03 22:26:00] 2025-12-03 21:25:56,361 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 22:26:00] 2025-12-03 21:25:56,405 [wrapper] pilotpid: 20086
[2025-12-03 22:26:00] 2025-12-03 21:25:56,491 [wrapper] Pilot exit status: 0
[2025-12-03 22:26:00] 2025-12-03 21:25:56,855 [wrapper] pandaids: 6897914527
[2025-12-03 22:26:00] 2025-12-03 21:25:57,742 [wrapper] cleanup supervisor_pilot 27290 20087
[2025-12-03 22:26:00] 2025-12-03 21:25:57,840 [wrapper] Test setup, not cleaning
[2025-12-03 22:26:00] 2025-12-03 21:25:57,895 [wrapper] apfmon messages muted
[2025-12-03 22:26:00] 2025-12-03 21:25:57,945 [wrapper] ==== wrapper stdout END ====
[2025-12-03 22:26:00] 2025-12-03 21:25:58,051 [wrapper] ==== wrapper stderr END ====
[2025-12-03 22:26:00]  *** Error codes and diagnostics ***
[2025-12-03 22:26:00]     "exeErrorCode": 0,
[2025-12-03 22:26:00]     "exeErrorDiag": "",
[2025-12-03 22:26:00]     "pilotErrorCode": 0,
[2025-12-03 22:26:00]     "pilotErrorDiag": "",
[2025-12-03 22:26:00]  *** Listing of results directory ***
[2025-12-03 22:26:00] total 1076036
[2025-12-03 22:26:00] -rw-r--r--. 1 boinc boinc    576529 Nov 28 23:41 pilot3.tar.gz
[2025-12-03 22:26:00] -rw-r--r--. 1 boinc boinc      5112 Nov 28 23:43 queuedata.json
[2025-12-03 22:26:00] -rwx------. 1 boinc boinc     36292 Nov 28 23:43 runpilot2-wrapper.sh
[2025-12-03 22:26:00] -rw-r--r--. 1 boinc boinc       100 Dec  3 02:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 22:26:00] -rwxr-xr-x. 1 boinc boinc      7986 Dec  3 02:36 run_atlas
[2025-12-03 22:26:00] -rw-r--r--. 1 boinc boinc       105 Dec  3 02:36 job.xml
[2025-12-03 22:26:00] -rw-r--r--. 1 boinc boinc      6391 Dec  3 02:36 init_data.xml
[2025-12-03 22:26:00] -rw-r--r--. 2 boinc boinc 376265671 Dec  3 02:36 EVNT.47528880._000051.pool.root.1
[2025-12-03 22:26:00] -rw-r--r--. 2 boinc boinc     15847 Dec  3 02:36 start_atlas.sh
[2025-12-03 22:26:00] drwxrwx--x. 2 boinc boinc        68 Dec  3 02:36 shared
[2025-12-03 22:26:00] -rw-r--r--. 2 boinc boinc    590123 Dec  3 02:36 input.tar.gz
[2025-12-03 22:26:00] -rw-r--r--. 1 boinc boinc         0 Dec  3 02:36 boinc_lockfile
[2025-12-03 22:26:00] -rw-r--r--. 1 boinc boinc      2877 Dec  3 02:36 pandaJob.out
[2025-12-03 22:26:00] -rw-------. 1 boinc boinc    989300 Dec  3 02:40 agis_schedconf.cvmfs.json
[2025-12-03 22:26:00] drwx------. 5 boinc boinc      4096 Dec  3 02:40 pilot3
[2025-12-03 22:26:00] -rw-r--r--. 1 boinc boinc       533 Dec  3 22:00 boinc_task_state.xml
[2025-12-03 22:26:00] -rw-------. 1 boinc boinc 697966590 Dec  3 22:22 HITS.47538121._000501.pool.root.1
[2025-12-03 22:26:00] -rw-------. 1 boinc boinc      1031 Dec  3 22:23 memory_monitor_summary.json
[2025-12-03 22:26:00] -rw-------. 1 boinc boinc   1516240 Dec  3 22:23 agis_ddmendpoints.agis.ALL.json
[2025-12-03 22:26:00] -rw-------. 1 boinc boinc   2372285 Dec  3 22:23 log.47538121._000501.job.log.tgz.1
[2025-12-03 22:26:00] -rw-------. 1 boinc boinc        95 Dec  3 22:25 pilot_heartbeat.json
[2025-12-03 22:26:00] -rw-------. 1 boinc boinc     25942 Dec  3 22:25 heartbeat.json
[2025-12-03 22:26:00] -rw-r--r--. 1 boinc boinc      8192 Dec  3 22:25 boinc_mmap_file
[2025-12-03 22:26:00] -rw-r--r--. 1 boinc boinc        29 Dec  3 22:25 wrapper_checkpoint.txt
[2025-12-03 22:26:00] -rw-------. 1 boinc boinc       820 Dec  3 22:25 pilotlog.txt
[2025-12-03 22:26:00] -rw-------. 1 boinc boinc   9476783 Dec  3 22:25 log.47538121._000501.job.log.1
[2025-12-03 22:26:00] -rw-------. 1 boinc boinc       353 Dec  3 22:25 output.list
[2025-12-03 22:26:00] -rw-r--r--. 1 boinc boinc       620 Dec  3 22:25 runtime_log
[2025-12-03 22:26:00] -rw-------. 1 boinc boinc  11888640 Dec  3 22:25 result.tar.gz
[2025-12-03 22:26:00] -rw-r--r--. 1 boinc boinc      8817 Dec  3 22:26 runtime_log.err
[2025-12-03 22:26:00] -rw-------. 1 boinc boinc       661 Dec  3 22:26 kkLKDm8MMj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7WLKDm7aKSlm.diag
[2025-12-03 22:26:00] -rw-r--r--. 1 boinc boinc     21376 Dec  3 22:26 stderr.txt
[2025-12-03 22:26:00] HITS file was successfully produced:
[2025-12-03 22:26:00] -rw-------. 1 boinc boinc 697966590 Dec  3 22:22 shared/HITS.pool.root.1
[2025-12-03 22:26:00]  *** Contents of shared directory: ***
[2025-12-03 22:26:00] total 1061264
[2025-12-03 22:26:00] -rw-r--r--. 2 boinc boinc 376265671 Dec  3 02:36 ATLAS.root_0
[2025-12-03 22:26:00] -rw-r--r--. 2 boinc boinc     15847 Dec  3 02:36 start_atlas.sh
[2025-12-03 22:26:00] -rw-r--r--. 2 boinc boinc    590123 Dec  3 02:36 input.tar.gz
[2025-12-03 22:26:00] -rw-------. 1 boinc boinc 697966590 Dec  3 22:22 HITS.pool.root.1
[2025-12-03 22:26:00] -rw-------. 1 boinc boinc  11888640 Dec  3 22:25 result.tar.gz
22:26:02 (16296): run_atlas exited; CPU time 264334.769369
22:26:02 (16296): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN