Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
09:24:34 (3857473): wrapper (7.7.26015): starting
09:24:34 (3857473): wrapper: running run_atlas (--nthreads 12)
[2025-12-01 09:24:34] Arguments: --nthreads 12
[2025-12-01 09:24:34] Threads: 12
[2025-12-01 09:24:34] Checking for CVMFS
[2025-12-01 09:24:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 09:24:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 09:24:34] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 09:24:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 09:24:34] 2.13.0.0 498242 17713 46516 153512 2 81 74323871 82903040 1302 130560 29 8347982 99.966 779403 324 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-01 09:24:34] CVMFS is ok
[2025-12-01 09:24:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 09:24:34] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-01 09:24:34] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-01 09:24:34] Further information can be found at the LHC@home message board.
[2025-12-01 09:24:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 09:24:34] Checking for apptainer binary...
[2025-12-01 09:24:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 09:24:34] Running /usr/bin/apptainer --version
[2025-12-01 09:24:34] apptainer version 1.4.4
[2025-12-01 09:24:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 09:24:34] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) torr
[2025-12-01 09:24:34] apptainer works
[2025-12-01 09:24:34] Set ATHENA_PROC_NUMBER=12
[2025-12-01 09:24:34] Set ATHENA_CORE_NUMBER=12
[2025-12-01 09:24:34] Starting ATLAS job with PandaID=6899134365
[2025-12-01 09:24:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 12:25:02]  *** The last 200 lines of the pilot log: ***
[2025-12-01 12:25:02] 2025-12-01 12:24:15,344 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-01 12:25:02] 2025-12-01 12:24:15,344 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 2920.3397499999996
[2025-12-01 12:25:02] 2025-12-01 12:24:15,345 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6899134365/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 12:25:02] 2025-12-01 12:24:15,345 | INFO     | extracted standard info from prmon json
[2025-12-01 12:25:02] 2025-12-01 12:24:15,345 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 12:25:02] 2025-12-01 12:24:15,345 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 12:25:02] 2025-12-01 12:24:15,346 | INFO     | fitting pss+swap vs Time
[2025-12-01 12:25:02] 2025-12-01 12:24:15,346 | INFO     | sum of square deviations: 1719415574.0451937
[2025-12-01 12:25:02] 2025-12-01 12:24:15,347 | INFO     | sum of deviations: 42931533014.57628
[2025-12-01 12:25:02] 2025-12-01 12:24:15,347 | INFO     | mean x: 1764586463.259887
[2025-12-01 12:25:02] 2025-12-01 12:24:15,347 | INFO     | mean y: 4088903.813559322
[2025-12-01 12:25:02] 2025-12-01 12:24:15,347 | INFO     | intersect: -44055301477.47015
[2025-12-01 12:25:02] 2025-12-01 12:24:15,347 | INFO     | chi2: 3.382249872103276
[2025-12-01 12:25:02] 2025-12-01 12:24:15,347 | INFO     | sum of square deviations: 1577779185.2267432
[2025-12-01 12:25:02] 2025-12-01 12:24:15,347 | INFO     | sum of deviations: 92892860984.81392
[2025-12-01 12:25:02] 2025-12-01 12:24:15,347 | INFO     | mean x: 1764586310.761628
[2025-12-01 12:25:02] 2025-12-01 12:24:15,347 | INFO     | mean y: 4142090.093023256
[2025-12-01 12:25:02] 2025-12-01 12:24:15,347 | INFO     | intersect: -103887120005.45105
[2025-12-01 12:25:02] 2025-12-01 12:24:15,347 | INFO     | chi2: 1.6919046632199362
[2025-12-01 12:25:02] 2025-12-01 12:24:15,347 | INFO     | current chi2=1.6919046632199362 (change=49.9769464942632 %)
[2025-12-01 12:25:02] 2025-12-01 12:24:15,347 | INFO     | sum of square deviations: 1444111102.9341283
[2025-12-01 12:25:02] 2025-12-01 12:24:15,348 | INFO     | sum of deviations: 87531625031.91019
[2025-12-01 12:25:02] 2025-12-01 12:24:15,348 | INFO     | mean x: 1764586158.245509
[2025-12-01 12:25:02] 2025-12-01 12:24:15,348 | INFO     | mean y: 4135970.880239521
[2025-12-01 12:25:02] 2025-12-01 12:24:15,348 | INFO     | intersect: -106952381173.9715
[2025-12-01 12:25:02] 2025-12-01 12:24:15,348 | INFO     | chi2: 1.693035862401645
[2025-12-01 12:25:02] 2025-12-01 12:24:15,348 | INFO     | current chi2=1.693035862401645 (change=-0.06685951084005311 %)
[2025-12-01 12:25:02] 2025-12-01 12:24:15,348 | INFO     | right removable region: 166
[2025-12-01 12:25:02] 2025-12-01 12:24:15,348 | INFO     | sum of square deviations: 1577772353.2267432
[2025-12-01 12:25:02] 2025-12-01 12:24:15,348 | INFO     | sum of deviations: -5971388328.825584
[2025-12-01 12:25:02] 2025-12-01 12:24:15,348 | INFO     | mean x: 1764586615.761628
[2025-12-01 12:25:02] 2025-12-01 12:24:15,348 | INFO     | mean y: 4140933.6627906975
[2025-12-01 12:25:02] 2025-12-01 12:24:15,348 | INFO     | intersect: 6682564409.02111
[2025-12-01 12:25:02] 2025-12-01 12:24:15,348 | INFO     | chi2: 1.780101364124452
[2025-12-01 12:25:02] 2025-12-01 12:24:15,348 | INFO     | current chi2=1.780101364124452 (change=47.36931239744616 %)
[2025-12-01 12:25:02] 2025-12-01 12:24:15,348 | INFO     | sum of square deviations: 1444140017.9281442
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | sum of deviations: -14085271435.215569
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | mean x: 1764586768.257485
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | mean y: 4150165.7724550897
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | intersect: 17214866088.979557
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | chi2: 1.7591614915503868
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | current chi2=1.7591614915503868 (change=1.1763303481520897 %)
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | left removable region: 20
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | sum of square deviations: 964960032.5821928
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | sum of deviations: 19776361717.575336
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | mean x: 1764586737.7328768
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | mean y: 4218677.630136986
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | intersect: -36160082878.00882
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | chi2: 0.020573549810790466
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | current memory leak: 20.49 B/s (using 146 data points, chi2=0.02)
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | could have reported an average CPU frequency of 3452 MHz (9 samples)
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | ..............................
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | . Timing measurements:
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | . get job = 0 s
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | . initial setup = 1 s
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | . payload setup = 2 s
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | . stage-in = 0 s
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | . payload execution = 10754 s
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | . stage-out = 0 s
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | . log creation = 0 s
[2025-12-01 12:25:02] 2025-12-01 12:24:15,349 | INFO     | ..............................
[2025-12-01 12:25:02] 2025-12-01 12:24:15,374 | INFO     | 
[2025-12-01 12:25:02] 2025-12-01 12:24:15,374 | INFO     | job summary report
[2025-12-01 12:25:02] 2025-12-01 12:24:15,374 | INFO     | --------------------------------------------------
[2025-12-01 12:25:02] 2025-12-01 12:24:15,375 | INFO     | PanDA job id: 6899134365
[2025-12-01 12:25:02] 2025-12-01 12:24:15,375 | INFO     | task id: 47531058
[2025-12-01 12:25:02] 2025-12-01 12:24:15,375 | INFO     | errors: (none)
[2025-12-01 12:25:02] 2025-12-01 12:24:15,375 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 12:25:02] 2025-12-01 12:24:15,375 | INFO     | pilot state: finished 
[2025-12-01 12:25:02] 2025-12-01 12:24:15,375 | INFO     | transexitcode: 0
[2025-12-01 12:25:02] 2025-12-01 12:24:15,375 | INFO     | exeerrorcode: 0
[2025-12-01 12:25:02] 2025-12-01 12:24:15,375 | INFO     | exeerrordiag: 
[2025-12-01 12:25:02] 2025-12-01 12:24:15,375 | INFO     | exitcode: 0
[2025-12-01 12:25:02] 2025-12-01 12:24:15,375 | INFO     | exitmsg: OK
[2025-12-01 12:25:02] 2025-12-01 12:24:15,375 | INFO     | cpuconsumptiontime: 105432 s
[2025-12-01 12:25:02] 2025-12-01 12:24:15,375 | INFO     | nevents: 1000
[2025-12-01 12:25:02] 2025-12-01 12:24:15,375 | INFO     | neventsw: 0
[2025-12-01 12:25:02] 2025-12-01 12:24:15,375 | INFO     | pid: 3868336
[2025-12-01 12:25:02] 2025-12-01 12:24:15,375 | INFO     | pgrp: 3868336
[2025-12-01 12:25:02] 2025-12-01 12:24:15,375 | INFO     | corecount: 12
[2025-12-01 12:25:02] 2025-12-01 12:24:15,375 | INFO     | event service: False
[2025-12-01 12:25:02] 2025-12-01 12:24:15,375 | INFO     | sizes: {0: 2284460, 1: 2284722, 11: 2284750, 10760: 2333730, 10761: 2342738, 10762: 2342794, 10765: 2343232}
[2025-12-01 12:25:02] 2025-12-01 12:24:15,375 | INFO     | --------------------------------------------------
[2025-12-01 12:25:02] 2025-12-01 12:24:15,375 | INFO     | 
[2025-12-01 12:25:02] 2025-12-01 12:24:15,375 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-12-01 12:25:02] 2025-12-01 12:24:15,382 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 12:25:02] 2025-12-01 12:24:15,382 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 12:25:02] 2025-12-01 12:24:15,382 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 12:25:02] 2025-12-01 12:24:15,382 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 12:25:02] 2025-12-01 12:24:15,382 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 12:25:02] 2025-12-01 12:24:15,382 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 12:25:02] 2025-12-01 12:24:15,382 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 12:25:02] 2025-12-01 12:24:15,382 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 12:25:02] 2025-12-01 12:24:15,382 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 12:25:02] 2025-12-01 12:24:15,382 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 12:25:02] 2025-12-01 12:24:15,382 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 12:25:02] 2025-12-01 12:24:15,382 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 12:25:02] 2025-12-01 12:24:15,382 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 12:25:02] 2025-12-01 12:24:15,382 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 12:25:02] 2025-12-01 12:24:15,382 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 12:25:02] 2025-12-01 12:24:15,382 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 12:25:02] 2025-12-01 12:24:15,382 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 12:25:02] 2025-12-01 12:24:15,382 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 12:25:02] 2025-12-01 12:24:15,382 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 12:25:02] 2025-12-01 12:24:15,382 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 12:25:02] 2025-12-01 12:24:15,382 | INFO     | job 6899134365 has completed (purged errors)
[2025-12-01 12:25:02] 2025-12-01 12:24:15,382 | INFO     | overall cleanup function is called
[2025-12-01 12:25:02] 2025-12-01 12:24:16,391 | INFO     | --- collectZombieJob: --- 10, [3868336]
[2025-12-01 12:25:02] 2025-12-01 12:24:16,391 | INFO     | zombie collector waiting for pid 3868336
[2025-12-01 12:25:02] 2025-12-01 12:24:16,391 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 12:25:02] 2025-12-01 12:24:16,391 | INFO     | collected zombie processes
[2025-12-01 12:25:02] 2025-12-01 12:24:16,391 | INFO     | will attempt to kill all subprocesses of pid=3868336
[2025-12-01 12:25:02] 2025-12-01 12:24:16,417 | INFO     | process IDs to be killed: [3868336] (in reverse order)
[2025-12-01 12:25:02] 2025-12-01 12:24:16,432 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 12:25:02] 2025-12-01 12:24:16,432 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 12:25:02] 2025-12-01 12:24:16,434 | INFO     | did not find any defunct processes belonging to 3868336
[2025-12-01 12:25:02] 2025-12-01 12:24:16,435 | INFO     | did not find any defunct processes belonging to 3868336
[2025-12-01 12:25:02] 2025-12-01 12:24:16,435 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 12:25:02] 2025-12-01 12:24:16,435 | INFO     | ready for new job
[2025-12-01 12:25:02] 2025-12-01 12:24:16,435 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 12:25:02] 2025-12-01 12:24:16,436 | INFO     | ***************************************
[2025-12-01 12:25:02] 2025-12-01 12:24:16,436 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 12:25:02] 2025-12-01 12:24:16,436 | INFO     | ***************************************
[2025-12-01 12:25:02] 2025-12-01 12:24:16,436 | INFO     | 
[2025-12-01 12:25:02] 2025-12-01 12:24:16,436 | INFO     | architecture information:
[2025-12-01 12:25:02] 2025-12-01 12:24:16,436 | INFO     | executing command: cat /etc/os-release
[2025-12-01 12:25:02] 2025-12-01 12:24:16,448 | INFO     | cat /etc/os-release:
[2025-12-01 12:25:02] NAME="CentOS Linux"
[2025-12-01 12:25:02] VERSION="7 (Core)"
[2025-12-01 12:25:02] ID="centos"
[2025-12-01 12:25:02] ID_LIKE="rhel fedora"
[2025-12-01 12:25:02] VERSION_ID="7"
[2025-12-01 12:25:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 12:25:02] ANSI_COLOR="0;31"
[2025-12-01 12:25:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 12:25:02] HOME_URL="https://www.centos.org/"
[2025-12-01 12:25:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 12:25:02] 
[2025-12-01 12:25:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 12:25:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 12:25:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 12:25:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 12:25:02] 
[2025-12-01 12:25:02] 2025-12-01 12:24:16,449 | INFO     | ***************************************
[2025-12-01 12:25:02] 2025-12-01 12:24:16,951 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-12-01 12:25:02] 2025-12-01 12:24:16,957 | INFO     | sufficient remaining disk space (287454527488 B)
[2025-12-01 12:25:02] 2025-12-01 12:24:16,957 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 12:25:02] 2025-12-01 12:24:16,957 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 12:25:02] 2025-12-01 12:24:16,957 | INFO     | update_server=False
[2025-12-01 12:25:02] 2025-12-01 12:24:16,957 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 12:25:02] 2025-12-01 12:24:16,957 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 12:25:02] 2025-12-01 12:24:16,957 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 12:25:02] 2025-12-01 12:24:17,031 | INFO     | job.realtimelogging is not enabled
[2025-12-01 12:25:02] 2025-12-01 12:24:17,162 | INFO     | all data control threads have been joined
[2025-12-01 12:25:02] 2025-12-01 12:24:17,250 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-01 12:25:02] 2025-12-01 12:24:17,250 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-01 12:25:02] 2025-12-01 12:24:17,250 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 12:25:02] 2025-12-01 12:24:17,250 | INFO     | will abort loop
[2025-12-01 12:25:02] 2025-12-01 12:24:17,655 | INFO     | all job control threads have been joined
[2025-12-01 12:25:02] 2025-12-01 12:24:17,962 | INFO     | [job] retrieve thread has finished
[2025-12-01 12:25:02] 2025-12-01 12:24:17,962 | INFO     | [job] queue monitor thread has finished
[2025-12-01 12:25:02] 2025-12-01 12:24:18,036 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 12:25:02] 2025-12-01 12:24:18,094 | INFO     | [payload] failed_post thread has finished
[2025-12-01 12:25:02] 2025-12-01 12:24:18,117 | INFO     | [payload] validate_post thread has finished
[2025-12-01 12:25:02] 2025-12-01 12:24:18,167 | INFO     | [data] control thread has finished
[2025-12-01 12:25:02] 2025-12-01 12:24:18,187 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 12:25:02] 2025-12-01 12:24:18,221 | INFO     | all payload control threads have been joined
[2025-12-01 12:25:02] 2025-12-01 12:24:18,252 | INFO     | [job] job monitor thread has finished
[2025-12-01 12:25:02] 2025-12-01 12:24:18,310 | INFO     | [data] copytool_in thread has finished
[2025-12-01 12:25:02] 2025-12-01 12:24:18,426 | INFO     | [job] validate thread has finished
[2025-12-01 12:25:02] 2025-12-01 12:24:18,474 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 12:25:02] 2025-12-01 12:24:18,514 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 12:25:02] 2025-12-01 12:24:18,660 | INFO     | [job] control thread has finished
[2025-12-01 12:25:02] 2025-12-01 12:24:18,962 | INFO     | [data] copytool_out thread has finished
[2025-12-01 12:25:02] 2025-12-01 12:24:19,197 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 12:25:02] 2025-12-01 12:24:19,226 | INFO     | [payload] control thread has finished
[2025-12-01 12:25:02] 2025-12-01 12:24:22,193 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 12:25:02] 2025-12-01 12:24:36,994 [wrapper] supervise_pilot (15 min periods counter: 13)
[2025-12-01 12:25:02] 2025-12-01 12:24:47,887 | INFO     | PID=3861205 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-01 12:25:02] 2025-12-01 12:24:47,887 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 12:25:02] 2025-12-01 12:24:47,887 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 12:25:02] 2025-12-01 12:24:47,887 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 12:25:02] 2025-12-01 12:24:55,692 | INFO     | [monitor] cgroup control has ended
[2025-12-01 12:25:02] 2025-12-01 12:24:57,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138098769512256)>', '<ExcThread(monitor, started 138098147055360)>']
[2025-12-01 12:25:02] 2025-12-01 12:24:57,923 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 12:25:02] 2025-12-01 12:24:57,923 | INFO     | [monitor] control thread has ended
[2025-12-01 12:25:02] 2025-12-01 12:25:02,454 | INFO     | all workflow threads have been joined
[2025-12-01 12:25:02] 2025-12-01 12:25:02,454 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 12:25:02] 2025-12-01 12:25:02,454 | INFO     | traces error code: 0
[2025-12-01 12:25:02] 2025-12-01 12:25:02,454 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 12:25:02] 2025-12-01 12:25:02,498 [wrapper] ==== pilot stdout END ====
[2025-12-01 12:25:02] 2025-12-01 12:25:02,499 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 12:25:02] 2025-12-01 12:25:02,500 [wrapper] pilotpid: 3861205
[2025-12-01 12:25:02] 2025-12-01 12:25:02,501 [wrapper] Pilot exit status: 0
[2025-12-01 12:25:02] 2025-12-01 12:25:02,505 [wrapper] pandaids: 6899134365
[2025-12-01 12:25:02] 2025-12-01 12:25:02,514 [wrapper] cleanup supervisor_pilot 3946576 3861206
[2025-12-01 12:25:02] 2025-12-01 12:25:02,515 [wrapper] Test setup, not cleaning
[2025-12-01 12:25:02] 2025-12-01 12:25:02,516 [wrapper] apfmon messages muted
[2025-12-01 12:25:02] 2025-12-01 12:25:02,517 [wrapper] ==== wrapper stdout END ====
[2025-12-01 12:25:02] 2025-12-01 12:25:02,518 [wrapper] ==== wrapper stderr END ====
[2025-12-01 12:25:02]  *** Error codes and diagnostics ***
[2025-12-01 12:25:02]     "exeErrorCode": 0,
[2025-12-01 12:25:02]     "exeErrorDiag": "",
[2025-12-01 12:25:02]     "pilotErrorCode": 0,
[2025-12-01 12:25:02]     "pilotErrorDiag": "",
[2025-12-01 12:25:02]  *** Listing of results directory ***
[2025-12-01 12:25:02] total 1069040
[2025-12-01 12:25:02] -rw-r--r-- 1 boinc boinc    576529 Nov 28 22:41 pilot3.tar.gz
[2025-12-01 12:25:02] -rwx------ 1 boinc boinc     36292 Nov 28 22:46 runpilot2-wrapper.sh
[2025-12-01 12:25:02] -rw-r--r-- 1 boinc boinc      5112 Nov 28 22:49 queuedata.json
[2025-12-01 12:25:02] -rw-r--r-- 1 boinc boinc       100 Dec  1 09:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 12:25:02] -rwxr-xr-x 1 boinc boinc      7986 Dec  1 09:24 run_atlas
[2025-12-01 12:25:02] -rw-r--r-- 1 boinc boinc       105 Dec  1 09:24 job.xml
[2025-12-01 12:25:02] -rw-r--r-- 1 boinc boinc      9907 Dec  1 09:24 init_data.xml
[2025-12-01 12:25:02] -rw-r--r-- 2 boinc boinc 378947593 Dec  1 09:24 EVNT.47531050._000515.pool.root.1
[2025-12-01 12:25:02] -rw-r--r-- 2 boinc boinc     15847 Dec  1 09:24 start_atlas.sh
[2025-12-01 12:25:02] drwxrwx--x 2 boinc boinc      4096 Dec  1 09:24 shared
[2025-12-01 12:25:02] -rw-r--r-- 2 boinc boinc    590121 Dec  1 09:24 input.tar.gz
[2025-12-01 12:25:02] -rw-r--r-- 1 boinc boinc         0 Dec  1 09:24 boinc_lockfile
[2025-12-01 12:25:02] -rw-r--r-- 1 boinc boinc      2880 Dec  1 09:24 pandaJob.out
[2025-12-01 12:25:02] -rw------- 1 boinc boinc    992532 Dec  1 09:24 agis_schedconf.cvmfs.json
[2025-12-01 12:25:02] -rw------- 1 boinc boinc   1516240 Dec  1 09:24 agis_ddmendpoints.agis.ALL.json
[2025-12-01 12:25:02] drwx------ 5 boinc boinc      4096 Dec  1 09:24 pilot3
[2025-12-01 12:25:02] -rw-r--r-- 1 boinc boinc       532 Dec  1 12:20 boinc_task_state.xml
[2025-12-01 12:25:02] -rw------- 1 boinc boinc 704658065 Dec  1 12:23 HITS.47531058._001309.pool.root.1
[2025-12-01 12:25:02] -rw------- 1 boinc boinc      1056 Dec  1 12:24 memory_monitor_summary.json
[2025-12-01 12:25:02] -rw------- 1 boinc boinc   2016037 Dec  1 12:24 log.47531058._001309.job.log.tgz.1
[2025-12-01 12:25:02] -rw------- 1 boinc boinc        95 Dec  1 12:24 pilot_heartbeat.json
[2025-12-01 12:25:02] -rw------- 1 boinc boinc     27771 Dec  1 12:24 heartbeat.json
[2025-12-01 12:25:02] -rw-r--r-- 1 boinc boinc      8192 Dec  1 12:24 boinc_mmap_file
[2025-12-01 12:25:02] -rw-r--r-- 1 boinc boinc        29 Dec  1 12:24 wrapper_checkpoint.txt
[2025-12-01 12:25:02] -rw------- 1 boinc boinc      5014 Dec  1 12:25 pilotlog.txt
[2025-12-01 12:25:02] -rw------- 1 boinc boinc   1553758 Dec  1 12:25 log.47531058._001309.job.log.1
[2025-12-01 12:25:02] -rw------- 1 boinc boinc       353 Dec  1 12:25 output.list
[2025-12-01 12:25:02] -rw-r--r-- 1 boinc boinc       620 Dec  1 12:25 runtime_log
[2025-12-01 12:25:02] -rw------- 1 boinc boinc   3604480 Dec  1 12:25 result.tar.gz
[2025-12-01 12:25:02] -rw------- 1 boinc boinc       660 Dec  1 12:25 ZQ5MDmZPMj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmecLKDmNxSmcm.diag
[2025-12-01 12:25:02] -rw-r--r-- 1 boinc boinc      9048 Dec  1 12:25 runtime_log.err
[2025-12-01 12:25:02] -rw-r--r-- 1 boinc boinc     21501 Dec  1 12:25 stderr.txt
[2025-12-01 12:25:02] HITS file was successfully produced:
[2025-12-01 12:25:02] -rw------- 1 boinc boinc 704658065 Dec  1 12:23 shared/HITS.pool.root.1
[2025-12-01 12:25:02]  *** Contents of shared directory: ***
[2025-12-01 12:25:02] total 1062332
[2025-12-01 12:25:02] -rw-r--r-- 2 boinc boinc 378947593 Dec  1 09:24 ATLAS.root_0
[2025-12-01 12:25:02] -rw-r--r-- 2 boinc boinc     15847 Dec  1 09:24 start_atlas.sh
[2025-12-01 12:25:02] -rw-r--r-- 2 boinc boinc    590121 Dec  1 09:24 input.tar.gz
[2025-12-01 12:25:02] -rw------- 1 boinc boinc 704658065 Dec  1 12:23 HITS.pool.root.1
[2025-12-01 12:25:02] -rw------- 1 boinc boinc   3604480 Dec  1 12:25 result.tar.gz
12:25:03 (3857473): run_atlas exited; CPU time 105103.424394
12:25:04 (3857473): called boinc_finish(0)

</stderr_txt>
]]>

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