Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:31:54 (21419): wrapper (7.7.26015): starting
22:31:54 (21419): wrapper: running run_atlas (--nthreads 8)
[2025-11-30 22:31:54] Arguments: --nthreads 8
[2025-11-30 22:31:54] Threads: 8
[2025-11-30 22:31:54] Checking for CVMFS
[2025-11-30 22:31:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 22:31:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 22:31:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 22:31:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 22:31:55] 2.11.2.0 2919 61132 79048 153503 2 69 19581482 20275200 1 130560 0 13556797 99.802 3668744 29495 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-30 22:31:55] CVMFS is ok
[2025-11-30 22:31:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 22:31:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 22:31:55] Further information can be found at the LHC@home message board.
[2025-11-30 22:31:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 22:31:55] Checking for apptainer binary...
[2025-11-30 22:31:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 22:31:55] Running /usr/bin/apptainer --version
[2025-11-30 22:31:55] apptainer version 1.3.2-1.el7
[2025-11-30 22:31:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 22:31:57] c-204-17.aglt2.org
[2025-11-30 22:31:57] apptainer works
[2025-11-30 22:31:57] Set ATHENA_PROC_NUMBER=8
[2025-11-30 22:31:57] Set ATHENA_CORE_NUMBER=8
[2025-11-30 22:31:57] Starting ATLAS job with PandaID=6895333380
[2025-11-30 22:31:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 11:09:40]  *** The last 200 lines of the pilot log: ***
[2025-12-01 11:09:40] 2025-12-01 16:09:04,970 | INFO     | monitor loop #3326: job 0:6895333380 is in state 'finished'
[2025-12-01 11:09:40] 2025-12-01 16:09:04,970 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-01 11:09:40] 2025-12-01 16:09:06,697 | INFO     | time since job start (45412s) is within the limit (172800.0s)
[2025-12-01 11:09:40] 2025-12-01 16:09:06,966 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-01 11:09:40] 2025-12-01 16:09:06,971 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-12-01 11:09:40] 2025-12-01 16:09:06,974 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895333380/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 11:09:40] 2025-12-01 16:09:06,974 | INFO     | extracted standard info from prmon json
[2025-12-01 11:09:40] 2025-12-01 16:09:06,975 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 11:09:40] 2025-12-01 16:09:06,975 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 11:09:40] 2025-12-01 16:09:06,987 | INFO     | fitting pss+swap vs Time
[2025-12-01 11:09:40] 2025-12-01 16:09:06,988 | INFO     | sum of square deviations: 127702625341.32126
[2025-12-01 11:09:40] 2025-12-01 16:09:06,999 | INFO     | sum of deviations: 778560333094.7893
[2025-12-01 11:09:40] 2025-12-01 16:09:07,000 | INFO     | mean x: 1764582629.0873656
[2025-12-01 11:09:40] 2025-12-01 16:09:07,000 | INFO     | mean y: 3116826.4032258065
[2025-12-01 11:09:40] 2025-12-01 16:09:07,000 | INFO     | intersect: -10754955185.065449
[2025-12-01 11:09:40] 2025-12-01 16:09:07,001 | INFO     | chi2: 6.0294242667935904
[2025-12-01 11:09:40] 2025-12-01 16:09:07,001 | INFO     | sum of square deviations: 125145389744.58446
[2025-12-01 11:09:40] 2025-12-01 16:09:07,013 | INFO     | sum of deviations: 1020696873199.8834
[2025-12-01 11:09:40] 2025-12-01 16:09:07,013 | INFO     | mean x: 1764582476.5913396
[2025-12-01 11:09:40] 2025-12-01 16:09:07,013 | INFO     | mean y: 3131259.7943166443
[2025-12-01 11:09:40] 2025-12-01 16:09:07,013 | INFO     | intersect: -14388959571.806036
[2025-12-01 11:09:40] 2025-12-01 16:09:07,014 | INFO     | chi2: 3.4503349010164945
[2025-12-01 11:09:40] 2025-12-01 16:09:07,014 | INFO     | current chi2=3.4503349010164945 (change=42.7750520058964 %)
[2025-12-01 11:09:40] 2025-12-01 16:09:07,015 | INFO     | sum of square deviations: 122622526885.32396
[2025-12-01 11:09:40] 2025-12-01 16:09:07,026 | INFO     | sum of deviations: 1147139852391.5728
[2025-12-01 11:09:40] 2025-12-01 16:09:07,027 | INFO     | mean x: 1764582324.095368
[2025-12-01 11:09:40] 2025-12-01 16:09:07,027 | INFO     | mean y: 3138897.991825613
[2025-12-01 11:09:40] 2025-12-01 16:09:07,027 | INFO     | intersect: -16504616717.651154
[2025-12-01 11:09:40] 2025-12-01 16:09:07,028 | INFO     | chi2: 2.656311768233921
[2025-12-01 11:09:40] 2025-12-01 16:09:07,028 | INFO     | current chi2=2.656311768233921 (change=23.012929340530057 %)
[2025-12-01 11:09:40] 2025-12-01 16:09:07,028 | INFO     | right removable region: 733
[2025-12-01 11:09:40] 2025-12-01 16:09:07,029 | INFO     | sum of square deviations: 125145123174.5845
[2025-12-01 11:09:40] 2025-12-01 16:09:07,040 | INFO     | sum of deviations: 548549818750.5167
[2025-12-01 11:09:40] 2025-12-01 16:09:07,040 | INFO     | mean x: 1764582781.5913396
[2025-12-01 11:09:40] 2025-12-01 16:09:07,040 | INFO     | mean y: 3130519.5182679296
[2025-12-01 11:09:40] 2025-12-01 16:09:07,041 | INFO     | intersect: -7731582112.166556
[2025-12-01 11:09:40] 2025-12-01 16:09:07,041 | INFO     | chi2: 3.5753395459298334
[2025-12-01 11:09:40] 2025-12-01 16:09:07,041 | INFO     | current chi2=3.5753395459298334 (change=40.70180853550755 %)
[2025-12-01 11:09:40] 2025-12-01 16:09:07,042 | INFO     | sum of square deviations: 122621993745.32399
[2025-12-01 11:09:40] 2025-12-01 16:09:07,054 | INFO     | sum of deviations: 498776858766.4309
[2025-12-01 11:09:40] 2025-12-01 16:09:07,054 | INFO     | mean x: 1764582934.095368
[2025-12-01 11:09:40] 2025-12-01 16:09:07,054 | INFO     | mean y: 3133526.4795640325
[2025-12-01 11:09:40] 2025-12-01 16:09:07,054 | INFO     | intersect: -7174478792.635922
[2025-12-01 11:09:40] 2025-12-01 16:09:07,055 | INFO     | chi2: 3.5181993142468952
[2025-12-01 11:09:40] 2025-12-01 16:09:07,055 | INFO     | current chi2=3.5181993142468952 (change=1.598176367556099 %)
[2025-12-01 11:09:40] 2025-12-01 16:09:07,055 | INFO     | left removable region: 20
[2025-12-01 11:09:40] 2025-12-01 16:09:07,056 | INFO     | sum of square deviations: 112395713490.04242
[2025-12-01 11:09:40] 2025-12-01 16:09:07,066 | INFO     | sum of deviations: 824345447236.2408
[2025-12-01 11:09:40] 2025-12-01 16:09:07,066 | INFO     | mean x: 1764582903.6072931
[2025-12-01 11:09:40] 2025-12-01 16:09:07,067 | INFO     | mean y: 3160205.7615708276
[2025-12-01 11:09:40] 2025-12-01 16:09:07,067 | INFO     | intersect: -12938844766.593977
[2025-12-01 11:09:40] 2025-12-01 16:09:07,067 | INFO     | chi2: 0.07035652563095789
[2025-12-01 11:09:40] 2025-12-01 16:09:07,068 | INFO     | current memory leak: 7.33 B/s (using 713 data points, chi2=0.07)
[2025-12-01 11:09:40] 2025-12-01 16:09:07,068 | INFO     | could have reported an average CPU frequency of 2173 MHz (28 samples)
[2025-12-01 11:09:40] 2025-12-01 16:09:07,069 | INFO     | ..............................
[2025-12-01 11:09:40] 2025-12-01 16:09:07,069 | INFO     | . Timing measurements:
[2025-12-01 11:09:40] 2025-12-01 16:09:07,069 | INFO     | . get job = 0 s
[2025-12-01 11:09:40] 2025-12-01 16:09:07,069 | INFO     | . initial setup = 2 s
[2025-12-01 11:09:40] 2025-12-01 16:09:07,069 | INFO     | . payload setup = 9 s
[2025-12-01 11:09:40] 2025-12-01 16:09:07,069 | INFO     | . stage-in = 0 s
[2025-12-01 11:09:40] 2025-12-01 16:09:07,069 | INFO     | . payload execution = 45368 s
[2025-12-01 11:09:40] 2025-12-01 16:09:07,069 | INFO     | . stage-out = 3 s
[2025-12-01 11:09:40] 2025-12-01 16:09:07,069 | INFO     | . log creation = 0 s
[2025-12-01 11:09:40] 2025-12-01 16:09:07,070 | INFO     | ..............................
[2025-12-01 11:09:40] 2025-12-01 16:09:07,160 | INFO     | 
[2025-12-01 11:09:40] 2025-12-01 16:09:07,160 | INFO     | job summary report
[2025-12-01 11:09:40] 2025-12-01 16:09:07,161 | INFO     | --------------------------------------------------
[2025-12-01 11:09:40] 2025-12-01 16:09:07,161 | INFO     | PanDA job id: 6895333380
[2025-12-01 11:09:40] 2025-12-01 16:09:07,161 | INFO     | task id: 47556137
[2025-12-01 11:09:40] 2025-12-01 16:09:07,161 | INFO     | errors: (none)
[2025-12-01 11:09:40] 2025-12-01 16:09:07,161 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 11:09:40] 2025-12-01 16:09:07,162 | INFO     | pilot state: finished 
[2025-12-01 11:09:40] 2025-12-01 16:09:07,162 | INFO     | transexitcode: 0
[2025-12-01 11:09:40] 2025-12-01 16:09:07,162 | INFO     | exeerrorcode: 0
[2025-12-01 11:09:40] 2025-12-01 16:09:07,162 | INFO     | exeerrordiag: 
[2025-12-01 11:09:40] 2025-12-01 16:09:07,162 | INFO     | exitcode: 0
[2025-12-01 11:09:40] 2025-12-01 16:09:07,162 | INFO     | exitmsg: OK
[2025-12-01 11:09:40] 2025-12-01 16:09:07,163 | INFO     | cpuconsumptiontime: 345894 s
[2025-12-01 11:09:40] 2025-12-01 16:09:07,163 | INFO     | nevents: 1000
[2025-12-01 11:09:40] 2025-12-01 16:09:07,163 | INFO     | neventsw: 0
[2025-12-01 11:09:40] 2025-12-01 16:09:07,163 | INFO     | pid: 32533
[2025-12-01 11:09:40] 2025-12-01 16:09:07,163 | INFO     | pgrp: 32533
[2025-12-01 11:09:40] 2025-12-01 16:09:07,163 | INFO     | corecount: 8
[2025-12-01 11:09:40] 2025-12-01 16:09:07,164 | INFO     | event service: False
[2025-12-01 11:09:40] 2025-12-01 16:09:07,164 | INFO     | sizes: {0: 2284315, 6: 2284577, 11: 2284605, 45381: 2330671, 45385: 2339665, 45388: 2339721, 45395: 2340095}
[2025-12-01 11:09:40] 2025-12-01 16:09:07,164 | INFO     | --------------------------------------------------
[2025-12-01 11:09:40] 2025-12-01 16:09:07,164 | INFO     | 
[2025-12-01 11:09:40] 2025-12-01 16:09:07,164 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-01 11:09:40] 2025-12-01 16:09:07,194 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 11:09:40] 2025-12-01 16:09:07,194 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 11:09:40] 2025-12-01 16:09:07,194 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 11:09:40] 2025-12-01 16:09:07,194 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 11:09:40] 2025-12-01 16:09:07,195 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 11:09:40] 2025-12-01 16:09:07,195 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 11:09:40] 2025-12-01 16:09:07,195 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 11:09:40] 2025-12-01 16:09:07,195 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 11:09:40] 2025-12-01 16:09:07,195 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 11:09:40] 2025-12-01 16:09:07,196 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 11:09:40] 2025-12-01 16:09:07,196 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 11:09:40] 2025-12-01 16:09:07,196 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 11:09:40] 2025-12-01 16:09:07,196 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 11:09:40] 2025-12-01 16:09:07,196 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 11:09:40] 2025-12-01 16:09:07,197 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 11:09:40] 2025-12-01 16:09:07,197 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 11:09:40] 2025-12-01 16:09:07,197 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 11:09:40] 2025-12-01 16:09:07,197 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 11:09:40] 2025-12-01 16:09:07,197 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 11:09:40] 2025-12-01 16:09:07,198 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 11:09:40] 2025-12-01 16:09:07,198 | INFO     | job 6895333380 has completed (purged errors)
[2025-12-01 11:09:40] 2025-12-01 16:09:07,198 | INFO     | overall cleanup function is called
[2025-12-01 11:09:40] 2025-12-01 16:09:08,214 | INFO     | --- collectZombieJob: --- 10, [32533]
[2025-12-01 11:09:40] 2025-12-01 16:09:08,214 | INFO     | zombie collector waiting for pid 32533
[2025-12-01 11:09:40] 2025-12-01 16:09:08,214 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 11:09:40] 2025-12-01 16:09:08,214 | INFO     | collected zombie processes
[2025-12-01 11:09:40] 2025-12-01 16:09:08,215 | INFO     | will attempt to kill all subprocesses of pid=32533
[2025-12-01 11:09:40] 2025-12-01 16:09:08,309 | INFO     | process IDs to be killed: [32533] (in reverse order)
[2025-12-01 11:09:40] 2025-12-01 16:09:08,367 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 11:09:40] 2025-12-01 16:09:08,368 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 11:09:40] 2025-12-01 16:09:08,372 | INFO     | did not find any defunct processes belonging to 32533
[2025-12-01 11:09:40] 2025-12-01 16:09:08,375 | INFO     | did not find any defunct processes belonging to 32533
[2025-12-01 11:09:40] 2025-12-01 16:09:08,378 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 11:09:40] 2025-12-01 16:09:08,378 | INFO     | ready for new job
[2025-12-01 11:09:40] 2025-12-01 16:09:08,378 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 11:09:40] 2025-12-01 16:09:08,381 | INFO     | ***************************************
[2025-12-01 11:09:40] 2025-12-01 16:09:08,381 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 11:09:40] 2025-12-01 16:09:08,381 | INFO     | ***************************************
[2025-12-01 11:09:40] 2025-12-01 16:09:08,382 | INFO     | 
[2025-12-01 11:09:40] 2025-12-01 16:09:08,382 | INFO     | architecture information:
[2025-12-01 11:09:40] 2025-12-01 16:09:08,383 | INFO     | executing command: cat /etc/os-release
[2025-12-01 11:09:40] 2025-12-01 16:09:08,402 | INFO     | cat /etc/os-release:
[2025-12-01 11:09:40] NAME="CentOS Linux"
[2025-12-01 11:09:40] VERSION="7 (Core)"
[2025-12-01 11:09:40] ID="centos"
[2025-12-01 11:09:40] ID_LIKE="rhel fedora"
[2025-12-01 11:09:40] VERSION_ID="7"
[2025-12-01 11:09:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 11:09:40] ANSI_COLOR="0;31"
[2025-12-01 11:09:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 11:09:40] HOME_URL="https://www.centos.org/"
[2025-12-01 11:09:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 11:09:40] 
[2025-12-01 11:09:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 11:09:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 11:09:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 11:09:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 11:09:40] 
[2025-12-01 11:09:40] 2025-12-01 16:09:08,403 | INFO     | ***************************************
[2025-12-01 11:09:40] 2025-12-01 16:09:08,906 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-01 11:09:40] 2025-12-01 16:09:08,927 | INFO     | sufficient remaining disk space (17445158912 B)
[2025-12-01 11:09:40] 2025-12-01 16:09:08,928 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 11:09:40] 2025-12-01 16:09:08,928 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 11:09:40] 2025-12-01 16:09:08,928 | INFO     | update_server=False
[2025-12-01 11:09:40] 2025-12-01 16:09:08,929 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 11:09:40] 2025-12-01 16:09:08,929 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 11:09:40] 2025-12-01 16:09:08,929 | INFO     | aborting loop
[2025-12-01 11:09:40] 2025-12-01 16:09:08,930 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 11:09:40] 2025-12-01 16:09:09,365 | INFO     | all payload control threads have been joined
[2025-12-01 11:09:40] 2025-12-01 16:09:09,635 | INFO     | all data control threads have been joined
[2025-12-01 11:09:40] 2025-12-01 16:09:09,835 | INFO     | all job control threads have been joined
[2025-12-01 11:09:40] 2025-12-01 16:09:09,934 | INFO     | [job] retrieve thread has finished
[2025-12-01 11:09:40] 2025-12-01 16:09:09,935 | INFO     | [job] job monitor thread has finished
[2025-12-01 11:09:40] 2025-12-01 16:09:09,936 | INFO     | [job] queue monitor thread has finished
[2025-12-01 11:09:40] 2025-12-01 16:09:09,956 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 11:09:40] 2025-12-01 16:09:09,986 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 11:09:40] 2025-12-01 16:09:10,002 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 11:09:40] 2025-12-01 16:09:10,020 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 11:09:40] 2025-12-01 16:09:10,186 | INFO     | [payload] validate_post thread has finished
[2025-12-01 11:09:40] 2025-12-01 16:09:10,370 | INFO     | [payload] control thread has finished
[2025-12-01 11:09:40] 2025-12-01 16:09:10,587 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 11:09:40] 2025-12-01 16:09:10,610 | INFO     | [job] validate thread has finished
[2025-12-01 11:09:40] 2025-12-01 16:09:10,640 | INFO     | [data] control thread has finished
[2025-12-01 11:09:40] 2025-12-01 16:09:10,840 | INFO     | [job] control thread has finished
[2025-12-01 11:09:40] 2025-12-01 16:09:11,064 | INFO     | [payload] failed_post thread has finished
[2025-12-01 11:09:40] 2025-12-01 16:09:11,099 | INFO     | [data] copytool_in thread has finished
[2025-12-01 11:09:40] 2025-12-01 16:09:12,025 | INFO     | [data] copytool_out thread has finished
[2025-12-01 11:09:40] 2025-12-01 16:09:14,008 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 11:09:40] 2025-12-01 16:09:19,716 | INFO     | job.realtimelogging is not enabled
[2025-12-01 11:09:40] 2025-12-01 16:09:20,722 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 11:09:40] 2025-12-01 16:09:28,950 | INFO     | [monitor] cgroup control has ended
[2025-12-01 11:09:40] 2025-12-01 16:09:29,453 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140525522954048)>', '<ExcThread(monitor, started 140524786792192)>']
[2025-12-01 11:09:40] 2025-12-01 16:09:34,478 | INFO     | all workflow threads have been joined
[2025-12-01 11:09:40] 2025-12-01 16:09:34,479 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 11:09:40] 2025-12-01 16:09:34,479 | INFO     | traces error code: 0
[2025-12-01 11:09:40] 2025-12-01 16:09:34,480 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 11:09:40] 2025-12-01 16:09:39,909 | INFO     | PID=26166 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-01 11:09:40] 2025-12-01 16:09:39,915 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 11:09:40] 2025-12-01 16:09:39,915 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 11:09:40] 2025-12-01 16:09:39,915 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 11:09:40] 2025-12-01 16:09:39,916 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 11:09:40] 2025-12-01 16:09:39,916 | INFO     | [monitor] control thread has ended
[2025-12-01 11:09:40] 2025-12-01 16:09:40,031 [wrapper] ==== pilot stdout END ====
[2025-12-01 11:09:40] 2025-12-01 16:09:40,035 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 11:09:40] 2025-12-01 16:09:40,040 [wrapper] pilotpid: 26166
[2025-12-01 11:09:40] 2025-12-01 16:09:40,044 [wrapper] Pilot exit status: 0
[2025-12-01 11:09:40] 2025-12-01 16:09:40,065 [wrapper] pandaids: 6895333380
[2025-12-01 11:09:40] 2025-12-01 16:09:40,108 [wrapper] cleanup supervisor_pilot 13643 26167
[2025-12-01 11:09:40] 2025-12-01 16:09:40,114 [wrapper] Test setup, not cleaning
[2025-12-01 11:09:40] 2025-12-01 16:09:40,119 [wrapper] apfmon messages muted
[2025-12-01 11:09:40] 2025-12-01 16:09:40,124 [wrapper] ==== wrapper stdout END ====
[2025-12-01 11:09:40] 2025-12-01 16:09:40,129 [wrapper] ==== wrapper stderr END ====
[2025-12-01 11:09:40]  *** Error codes and diagnostics ***
[2025-12-01 11:09:40]     "exeErrorCode": 0,
[2025-12-01 11:09:40]     "exeErrorDiag": "",
[2025-12-01 11:09:40]     "pilotErrorCode": 0,
[2025-12-01 11:09:40]     "pilotErrorDiag": "",
[2025-12-01 11:09:40]  *** Listing of results directory ***
[2025-12-01 11:09:40] total 1306544
[2025-12-01 11:09:40] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 20:38 queuedata.json
[2025-12-01 11:09:40] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 20:38 pilot3.tar.gz
[2025-12-01 11:09:40] -rwx------ 1 boincer umatlas     36292 Nov 21 20:39 runpilot2-wrapper.sh
[2025-12-01 11:09:40] -rw-r--r-- 1 boincer umatlas       100 Nov 30 22:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 11:09:40] -rwxr-xr-x 1 boincer umatlas      7986 Nov 30 22:31 run_atlas
[2025-12-01 11:09:40] -rw-r--r-- 1 boincer umatlas       105 Nov 30 22:31 job.xml
[2025-12-01 11:09:40] -rw-r--r-- 2 boincer umatlas 409403146 Nov 30 22:31 EVNT.47483658._000202.pool.root.1
[2025-12-01 11:09:40] -rw-r--r-- 2 boincer umatlas     15847 Nov 30 22:31 start_atlas.sh
[2025-12-01 11:09:40] drwxrwx--x 2 boincer umatlas      4096 Nov 30 22:31 shared
[2025-12-01 11:09:40] -rw-r--r-- 2 boincer umatlas    590101 Nov 30 22:31 input.tar.gz
[2025-12-01 11:09:40] -rw-r--r-- 1 boincer umatlas         0 Nov 30 22:31 boinc_lockfile
[2025-12-01 11:09:40] -rw-r--r-- 1 boincer umatlas      2786 Nov 30 22:31 pandaJob.out
[2025-12-01 11:09:40] -rw------- 1 boincer umatlas        57 Nov 30 22:31 setup.sh.local
[2025-12-01 11:09:40] -rw------- 1 boincer umatlas    993245 Nov 30 22:32 agis_schedconf.cvmfs.json
[2025-12-01 11:09:40] drwx------ 5 boincer umatlas      4096 Nov 30 22:32 pilot3
[2025-12-01 11:09:40] -rw-r--r-- 1 boincer umatlas       532 Dec  1 10:57 boinc_task_state.xml
[2025-12-01 11:09:40] -rw-r--r-- 1 boincer umatlas      5913 Dec  1 11:01 init_data.xml
[2025-12-01 11:09:40] -rw------- 1 boincer umatlas 908160546 Dec  1 11:08 HITS.47556137._001993.pool.root.1
[2025-12-01 11:09:40] -rw------- 1 boincer umatlas      1061 Dec  1 11:08 memory_monitor_summary.json
[2025-12-01 11:09:40] -rw------- 1 boincer umatlas   1516240 Dec  1 11:08 agis_ddmendpoints.agis.ALL.json
[2025-12-01 11:09:40] -rw------- 1 boincer umatlas   1978067 Dec  1 11:08 log.47556137._001993.job.log.tgz.1
[2025-12-01 11:09:40] -rw------- 1 boincer umatlas      8659 Dec  1 11:09 heartbeat.json
[2025-12-01 11:09:40] -rw-r--r-- 1 boincer umatlas      8192 Dec  1 11:09 boinc_mmap_file
[2025-12-01 11:09:40] -rw-r--r-- 1 boincer umatlas        29 Dec  1 11:09 wrapper_checkpoint.txt
[2025-12-01 11:09:40] -rw------- 1 boincer umatlas       745 Dec  1 11:09 pilotlog.txt
[2025-12-01 11:09:40] -rw------- 1 boincer umatlas        95 Dec  1 11:09 pilot_heartbeat.json
[2025-12-01 11:09:40] -rw------- 1 boincer umatlas   6237195 Dec  1 11:09 log.47556137._001993.job.log.1
[2025-12-01 11:09:40] -rw------- 1 boincer umatlas       353 Dec  1 11:09 output.list
[2025-12-01 11:09:40] -rw-r--r-- 1 boincer umatlas       620 Dec  1 11:09 runtime_log
[2025-12-01 11:09:40] -rw------- 1 boincer umatlas   8232960 Dec  1 11:09 result.tar.gz
[2025-12-01 11:09:40] -rw-r--r-- 1 boincer umatlas      9343 Dec  1 11:09 runtime_log.err
[2025-12-01 11:09:40] -rw------- 1 boincer umatlas       668 Dec  1 11:09 MqnNDm0lrg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKqJKDmZ8fgam.diag
[2025-12-01 11:09:40] -rw-r--r-- 1 boincer umatlas     21281 Dec  1 11:09 stderr.txt
[2025-12-01 11:09:40] HITS file was successfully produced:
[2025-12-01 11:09:40] -rw------- 1 boincer umatlas 908160546 Dec  1 11:08 shared/HITS.pool.root.1
[2025-12-01 11:09:40]  *** Contents of shared directory: ***
[2025-12-01 11:09:40] total 1295324
[2025-12-01 11:09:40] -rw-r--r-- 2 boincer umatlas 409403146 Nov 30 22:31 ATLAS.root_0
[2025-12-01 11:09:40] -rw-r--r-- 2 boincer umatlas     15847 Nov 30 22:31 start_atlas.sh
[2025-12-01 11:09:40] -rw-r--r-- 2 boincer umatlas    590101 Nov 30 22:31 input.tar.gz
[2025-12-01 11:09:40] -rw------- 1 boincer umatlas 908160546 Dec  1 11:08 HITS.pool.root.1
[2025-12-01 11:09:40] -rw------- 1 boincer umatlas   8232960 Dec  1 11:09 result.tar.gz
11:09:42 (21419): run_atlas exited; CPU time 342494.179920
11:09:42 (21419): called boinc_finish(0)

</stderr_txt>
]]>

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