Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:09:27 (56273): wrapper (7.7.26015): starting
09:09:27 (56273): wrapper: running run_atlas (--nthreads 4)
[2025-12-03 09:09:27] Arguments: --nthreads 4
[2025-12-03 09:09:27] Threads: 4
[2025-12-03 09:09:27] Checking for CVMFS
[2025-12-03 09:09:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 09:09:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 09:09:27] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 09:09:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 09:09:27] 2.9.2.0 3041 348 55472 153585 0 68 31405274 36864001 0 130560 0 149373 99.984 11924 17957 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-03 09:09:27] CVMFS is ok
[2025-12-03 09:09:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 09:09:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-03 09:09:27] Further information can be found at the LHC@home message board.
[2025-12-03 09:09:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 09:09:27] Checking for apptainer binary...
[2025-12-03 09:09:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-03 09:09:27] Running /usr/bin/apptainer --version
[2025-12-03 09:09:27] apptainer version 1.4.1-1.1
[2025-12-03 09:09:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 09:09:27] cosA131b
[2025-12-03 09:09:27] apptainer works
[2025-12-03 09:09:27] Set ATHENA_PROC_NUMBER=4
[2025-12-03 09:09:27] Set ATHENA_CORE_NUMBER=4
[2025-12-03 09:09:27] Starting ATLAS job with PandaID=6891565269
[2025-12-03 09:09:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 15:57:13]  *** The last 200 lines of the pilot log: ***
[2025-12-03 15:57:13] 2025-12-03 14:56:20,005 | INFO     | extracted standard info from prmon json
[2025-12-03 15:57:13] 2025-12-03 14:56:20,005 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 15:57:13] 2025-12-03 14:56:20,005 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 15:57:13] 2025-12-03 14:56:20,008 | INFO     | fitting pss+swap vs Time
[2025-12-03 15:57:13] 2025-12-03 14:56:20,008 | INFO     | sum of square deviations: 19845209300.0
[2025-12-03 15:57:13] 2025-12-03 14:56:20,010 | INFO     | sum of deviations: 223199831094.5
[2025-12-03 15:57:13] 2025-12-03 14:56:20,010 | INFO     | mean x: 1764761568.5
[2025-12-03 15:57:13] 2025-12-03 14:56:20,010 | INFO     | mean y: 2378405.3575
[2025-12-03 15:57:13] 2025-12-03 14:56:20,010 | INFO     | intersect: -19845962726.08448
[2025-12-03 15:57:13] 2025-12-03 14:56:20,010 | INFO     | chi2: 4.347997797375549
[2025-12-03 15:57:13] 2025-12-03 14:56:20,010 | INFO     | sum of square deviations: 19110274590.0
[2025-12-03 15:57:13] 2025-12-03 14:56:20,012 | INFO     | sum of deviations: 284823197810.9999
[2025-12-03 15:57:13] 2025-12-03 14:56:20,012 | INFO     | mean x: 1764761416.0
[2025-12-03 15:57:13] 2025-12-03 14:56:20,012 | INFO     | mean y: 2391139.653164557
[2025-12-03 15:57:13] 2025-12-03 14:56:20,012 | INFO     | intersect: -26299951482.96994
[2025-12-03 15:57:13] 2025-12-03 14:56:20,012 | INFO     | chi2: 2.9411324566859323
[2025-12-03 15:57:13] 2025-12-03 14:56:20,012 | INFO     | current chi2=2.9411324566859323 (change=32.35662496284613 %)
[2025-12-03 15:57:13] 2025-12-03 14:56:20,012 | INFO     | sum of square deviations: 18393712317.5
[2025-12-03 15:57:13] 2025-12-03 14:56:20,013 | INFO     | sum of deviations: 279022705035.5
[2025-12-03 15:57:13] 2025-12-03 14:56:20,014 | INFO     | mean x: 1764761263.5
[2025-12-03 15:57:13] 2025-12-03 14:56:20,014 | INFO     | mean y: 2389905.7564102565
[2025-12-03 15:57:13] 2025-12-03 14:56:20,014 | INFO     | intersect: -26768087580.46335
[2025-12-03 15:57:13] 2025-12-03 14:56:20,014 | INFO     | chi2: 2.9395109884520876
[2025-12-03 15:57:13] 2025-12-03 14:56:20,014 | INFO     | current chi2=2.9395109884520876 (change=0.055130744967254924 %)
[2025-12-03 15:57:13] 2025-12-03 14:56:20,014 | INFO     | right removable region: 389
[2025-12-03 15:57:13] 2025-12-03 14:56:20,014 | INFO     | sum of square deviations: 19110274590.0
[2025-12-03 15:57:13] 2025-12-03 14:56:20,015 | INFO     | sum of deviations: 125650358523.00003
[2025-12-03 15:57:13] 2025-12-03 14:56:20,016 | INFO     | mean x: 1764761721.0
[2025-12-03 15:57:13] 2025-12-03 14:56:20,016 | INFO     | mean y: 2398620.2278481014
[2025-12-03 15:57:13] 2025-12-03 14:56:20,016 | INFO     | intersect: -11600937684.91085
[2025-12-03 15:57:13] 2025-12-03 14:56:20,016 | INFO     | chi2: 1.9857540740003612
[2025-12-03 15:57:13] 2025-12-03 14:56:20,016 | INFO     | current chi2=1.9857540740003612 (change=54.32945998273131 %)
[2025-12-03 15:57:13] 2025-12-03 14:56:20,016 | INFO     | sum of square deviations: 18393712317.5
[2025-12-03 15:57:13] 2025-12-03 14:56:20,017 | INFO     | sum of deviations: 86499232261.00003
[2025-12-03 15:57:13] 2025-12-03 14:56:20,017 | INFO     | mean x: 1764761873.5
[2025-12-03 15:57:13] 2025-12-03 14:56:20,017 | INFO     | mean y: 2406912.1384615386
[2025-12-03 15:57:13] 2025-12-03 14:56:20,017 | INFO     | intersect: -8296654448.955052
[2025-12-03 15:57:13] 2025-12-03 14:56:20,018 | INFO     | chi2: 1.4759583339728881
[2025-12-03 15:57:13] 2025-12-03 14:56:20,018 | INFO     | current chi2=1.4759583339728881 (change=25.672652354199847 %)
[2025-12-03 15:57:13] 2025-12-03 14:56:20,018 | INFO     | sum of square deviations: 17695289920.0
[2025-12-03 15:57:13] 2025-12-03 14:56:20,019 | INFO     | sum of deviations: 75726056726.00002
[2025-12-03 15:57:13] 2025-12-03 14:56:20,019 | INFO     | mean x: 1764762026.0
[2025-12-03 15:57:13] 2025-12-03 14:56:20,019 | INFO     | mean y: 2409263.8389610387
[2025-12-03 15:57:13] 2025-12-03 14:56:20,019 | INFO     | intersect: -7549796430.045862
[2025-12-03 15:57:13] 2025-12-03 14:56:20,020 | INFO     | chi2: 1.464704337582568
[2025-12-03 15:57:13] 2025-12-03 14:56:20,020 | INFO     | current chi2=1.464704337582568 (change=0.7624874043718726 %)
[2025-12-03 15:57:13] 2025-12-03 14:56:20,020 | INFO     | left removable region: 30
[2025-12-03 15:57:13] 2025-12-03 14:56:20,020 | INFO     | sum of square deviations: 14346910860.0
[2025-12-03 15:57:13] 2025-12-03 14:56:20,021 | INFO     | sum of deviations: 106190166034.00002
[2025-12-03 15:57:13] 2025-12-03 14:56:20,021 | INFO     | mean x: 1764762148.0
[2025-12-03 15:57:13] 2025-12-03 14:56:20,021 | INFO     | mean y: 2428333.016713092
[2025-12-03 15:57:13] 2025-12-03 14:56:20,021 | INFO     | intersect: -13059643867.4262
[2025-12-03 15:57:13] 2025-12-03 14:56:20,021 | INFO     | chi2: 0.028385061680414006
[2025-12-03 15:57:13] 2025-12-03 14:56:20,021 | INFO     | current memory leak: 7.40 B/s (using 359 data points, chi2=0.03)
[2025-12-03 15:57:13] 2025-12-03 14:56:20,021 | INFO     | could have reported an average CPU frequency of 3825 MHz (17 samples)
[2025-12-03 15:57:13] 2025-12-03 14:56:20,022 | INFO     | ..............................
[2025-12-03 15:57:13] 2025-12-03 14:56:20,022 | INFO     | . Timing measurements:
[2025-12-03 15:57:13] 2025-12-03 14:56:20,022 | INFO     | . get job = 0 s
[2025-12-03 15:57:13] 2025-12-03 14:56:20,022 | INFO     | . initial setup = 1 s
[2025-12-03 15:57:13] 2025-12-03 14:56:20,022 | INFO     | . payload setup = 4 s
[2025-12-03 15:57:13] 2025-12-03 14:56:20,022 | INFO     | . stage-in = 0 s
[2025-12-03 15:57:13] 2025-12-03 14:56:20,022 | INFO     | . payload execution = 24374 s
[2025-12-03 15:57:13] 2025-12-03 14:56:20,022 | INFO     | . stage-out = 1 s
[2025-12-03 15:57:13] 2025-12-03 14:56:20,022 | INFO     | . log creation = 0 s
[2025-12-03 15:57:13] 2025-12-03 14:56:20,022 | INFO     | ..............................
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | 
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | job summary report
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | --------------------------------------------------
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | PanDA job id: 6891565269
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | task id: 47493068
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | errors: (none)
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | pilot state: finished 
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | transexitcode: 0
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | exeerrorcode: 0
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | exeerrordiag: 
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | exitcode: 0
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | exitmsg: OK
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | cpuconsumptiontime: 95458 s
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | nevents: 1000
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | neventsw: 0
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | pid: 66641
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | pgrp: 66641
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | corecount: 4
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | event service: False
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | sizes: {0: 2284307, 3: 2284569, 11: 2284597, 24382: 2321395, 24384: 2330395, 24386: 2330451, 24390: 2330889}
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | --------------------------------------------------
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | 
[2025-12-03 15:57:13] 2025-12-03 14:56:20,062 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-03 15:57:13] 2025-12-03 14:56:20,081 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 15:57:13] 2025-12-03 14:56:20,081 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 15:57:13] 2025-12-03 14:56:20,081 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 15:57:13] 2025-12-03 14:56:20,081 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 15:57:13] 2025-12-03 14:56:20,081 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 15:57:13] 2025-12-03 14:56:20,081 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 15:57:13] 2025-12-03 14:56:20,081 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 15:57:13] 2025-12-03 14:56:20,081 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 15:57:13] 2025-12-03 14:56:20,081 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 15:57:13] 2025-12-03 14:56:20,081 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 15:57:13] 2025-12-03 14:56:20,081 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 15:57:13] 2025-12-03 14:56:20,081 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 15:57:13] 2025-12-03 14:56:20,081 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 15:57:13] 2025-12-03 14:56:20,081 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 15:57:13] 2025-12-03 14:56:20,081 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 15:57:13] 2025-12-03 14:56:20,081 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 15:57:13] 2025-12-03 14:56:20,081 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 15:57:13] 2025-12-03 14:56:20,082 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 15:57:13] 2025-12-03 14:56:20,082 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 15:57:13] 2025-12-03 14:56:20,082 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 15:57:13] 2025-12-03 14:56:20,082 | INFO     | job 6891565269 has completed (purged errors)
[2025-12-03 15:57:13] 2025-12-03 14:56:20,082 | INFO     | overall cleanup function is called
[2025-12-03 15:57:13] 2025-12-03 14:56:21,091 | INFO     | --- collectZombieJob: --- 10, [66641]
[2025-12-03 15:57:13] 2025-12-03 14:56:21,091 | INFO     | zombie collector waiting for pid 66641
[2025-12-03 15:57:13] 2025-12-03 14:56:21,092 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 15:57:13] 2025-12-03 14:56:21,092 | INFO     | collected zombie processes
[2025-12-03 15:57:13] 2025-12-03 14:56:21,092 | INFO     | will attempt to kill all subprocesses of pid=66641
[2025-12-03 15:57:13] 2025-12-03 14:56:21,135 | INFO     | process IDs to be killed: [66641] (in reverse order)
[2025-12-03 15:57:13] 2025-12-03 14:56:21,168 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 15:57:13] 2025-12-03 14:56:21,168 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 15:57:13] 2025-12-03 14:56:21,170 | INFO     | did not find any defunct processes belonging to 66641
[2025-12-03 15:57:13] 2025-12-03 14:56:21,171 | INFO     | did not find any defunct processes belonging to 66641
[2025-12-03 15:57:13] 2025-12-03 14:56:21,172 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 15:57:13] 2025-12-03 14:56:21,172 | INFO     | ready for new job
[2025-12-03 15:57:13] 2025-12-03 14:56:21,172 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 15:57:13] 2025-12-03 14:56:21,173 | INFO     | ***************************************
[2025-12-03 15:57:13] 2025-12-03 14:56:21,173 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 15:57:13] 2025-12-03 14:56:21,173 | INFO     | ***************************************
[2025-12-03 15:57:13] 2025-12-03 14:56:21,173 | INFO     | 
[2025-12-03 15:57:13] 2025-12-03 14:56:21,174 | INFO     | architecture information:
[2025-12-03 15:57:13] 2025-12-03 14:56:21,174 | INFO     | executing command: cat /etc/os-release
[2025-12-03 15:57:13] 2025-12-03 14:56:21,188 | INFO     | cat /etc/os-release:
[2025-12-03 15:57:13] NAME="CentOS Linux"
[2025-12-03 15:57:13] VERSION="7 (Core)"
[2025-12-03 15:57:13] ID="centos"
[2025-12-03 15:57:13] ID_LIKE="rhel fedora"
[2025-12-03 15:57:13] VERSION_ID="7"
[2025-12-03 15:57:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 15:57:13] ANSI_COLOR="0;31"
[2025-12-03 15:57:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 15:57:13] HOME_URL="https://www.centos.org/"
[2025-12-03 15:57:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 15:57:13] 
[2025-12-03 15:57:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 15:57:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 15:57:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 15:57:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 15:57:13] 
[2025-12-03 15:57:13] 2025-12-03 14:56:21,188 | INFO     | ***************************************
[2025-12-03 15:57:13] 2025-12-03 14:56:21,692 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-03 15:57:13] 2025-12-03 14:56:21,718 | INFO     | sufficient remaining disk space (321405321216 B)
[2025-12-03 15:57:13] 2025-12-03 14:56:21,718 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 15:57:13] 2025-12-03 14:56:21,719 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 15:57:13] 2025-12-03 14:56:21,719 | INFO     | update_server=False
[2025-12-03 15:57:13] 2025-12-03 14:56:21,719 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 15:57:13] 2025-12-03 14:56:21,719 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 15:57:13] 2025-12-03 14:56:21,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 15:57:13] 2025-12-03 14:56:21,954 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 15:57:13] 2025-12-03 14:56:22,127 | INFO     | all data control threads have been joined
[2025-12-03 15:57:13] 2025-12-03 14:56:22,257 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 15:57:13] 2025-12-03 14:56:22,258 | INFO     | aborting loop
[2025-12-03 15:57:13] 2025-12-03 14:56:22,377 | INFO     | all job control threads have been joined
[2025-12-03 15:57:13] 2025-12-03 14:56:22,724 | INFO     | [job] queue monitor thread has finished
[2025-12-03 15:57:13] 2025-12-03 14:56:22,725 | INFO     | [job] retrieve thread has finished
[2025-12-03 15:57:13] 2025-12-03 14:56:22,813 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 15:57:13] 2025-12-03 14:56:23,012 | INFO     | [data] copytool_in thread has finished
[2025-12-03 15:57:13] 2025-12-03 14:56:23,013 | INFO     | all payload control threads have been joined
[2025-12-03 15:57:13] 2025-12-03 14:56:23,133 | INFO     | [data] control thread has finished
[2025-12-03 15:57:13] 2025-12-03 14:56:23,137 | INFO     | [payload] validate_post thread has finished
[2025-12-03 15:57:13] 2025-12-03 14:56:23,263 | INFO     | [job] job monitor thread has finished
[2025-12-03 15:57:13] 2025-12-03 14:56:23,383 | INFO     | [job] control thread has finished
[2025-12-03 15:57:13] 2025-12-03 14:56:23,422 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 15:57:13] 2025-12-03 14:56:23,722 | INFO     | [data] copytool_out thread has finished
[2025-12-03 15:57:13] 2025-12-03 14:56:23,860 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 15:57:13] 2025-12-03 14:56:23,897 | INFO     | [job] validate thread has finished
[2025-12-03 15:57:13] 2025-12-03 14:56:23,998 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 15:57:13] 2025-12-03 14:56:24,019 | INFO     | [payload] control thread has finished
[2025-12-03 15:57:13] 2025-12-03 14:56:24,228 | INFO     | [payload] failed_post thread has finished
[2025-12-03 15:57:13] 2025-12-03 14:56:25,961 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 15:57:13] 2025-12-03 14:56:52,630 | INFO     | PID=60064 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-03 15:57:13] 2025-12-03 14:56:52,630 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 15:57:13] 2025-12-03 14:56:52,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 15:57:13] 2025-12-03 14:56:52,631 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 15:57:13] 2025-12-03 14:57:07,844 | INFO     | [monitor] cgroup control has ended
[2025-12-03 15:57:13] 2025-12-03 14:57:08,613 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139866948319040)>', '<ExcThread(monitor, started 139865937143552)>']
[2025-12-03 15:57:13] 2025-12-03 14:57:08,716 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 15:57:13] 2025-12-03 14:57:08,716 | INFO     | [monitor] control thread has ended
[2025-12-03 15:57:13] 2025-12-03 14:57:13,639 | INFO     | all workflow threads have been joined
[2025-12-03 15:57:13] 2025-12-03 14:57:13,639 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 15:57:13] 2025-12-03 14:57:13,640 | INFO     | traces error code: 0
[2025-12-03 15:57:13] 2025-12-03 14:57:13,641 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 15:57:13] 2025-12-03 14:57:13,722 [wrapper] ==== pilot stdout END ====
[2025-12-03 15:57:13] 2025-12-03 14:57:13,726 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 15:57:13] 2025-12-03 14:57:13,730 [wrapper] pilotpid: 60064
[2025-12-03 15:57:13] 2025-12-03 14:57:13,734 [wrapper] Pilot exit status: 0
[2025-12-03 15:57:13] 2025-12-03 14:57:13,745 [wrapper] pandaids: 6891565269
[2025-12-03 15:57:13] 2025-12-03 14:57:13,769 [wrapper] cleanup supervisor_pilot  111253 60065
[2025-12-03 15:57:13] 2025-12-03 14:57:13,773 [wrapper] Test setup, not cleaning
[2025-12-03 15:57:13] 2025-12-03 14:57:13,776 [wrapper] apfmon messages muted
[2025-12-03 15:57:13] 2025-12-03 14:57:13,780 [wrapper] ==== wrapper stdout END ====
[2025-12-03 15:57:13] 2025-12-03 14:57:13,784 [wrapper] ==== wrapper stderr END ====
[2025-12-03 15:57:13]  *** Error codes and diagnostics ***
[2025-12-03 15:57:13]     "exeErrorCode": 0,
[2025-12-03 15:57:13]     "exeErrorDiag": "",
[2025-12-03 15:57:13]     "pilotErrorCode": 0,
[2025-12-03 15:57:13]     "pilotErrorDiag": "",
[2025-12-03 15:57:13]  *** Listing of results directory ***
[2025-12-03 15:57:13] total 1298508
[2025-12-03 15:57:13] -rw-r--r-- 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-12-03 15:57:13] -rw-r--r-- 1 boinc boinc      5112 Nov 18 16:29 queuedata.json
[2025-12-03 15:57:13] -rwx------ 1 boinc boinc     36292 Nov 18 16:30 runpilot2-wrapper.sh
[2025-12-03 15:57:13] -rw-r--r-- 1 boinc boinc       100 Dec  3 09:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 15:57:13] -rwxr-xr-x 1 boinc boinc      7986 Dec  3 09:09 run_atlas
[2025-12-03 15:57:13] -rw-r--r-- 1 boinc boinc       105 Dec  3 09:09 job.xml
[2025-12-03 15:57:13] -rw-r--r-- 2 boinc boinc 409373983 Dec  3 09:09 EVNT.47493065._000142.pool.root.1
[2025-12-03 15:57:13] drwxrwx--x 2 boinc boinc      4096 Dec  3 09:09 shared
[2025-12-03 15:57:13] -rw-r--r-- 2 boinc boinc    590099 Dec  3 09:09 input.tar.gz
[2025-12-03 15:57:13] -rw-r--r-- 2 boinc boinc     15120 Dec  3 09:09 start_atlas.sh
[2025-12-03 15:57:13] -rw-r--r-- 1 boinc boinc         0 Dec  3 09:09 boinc_setup_complete
[2025-12-03 15:57:13] -rw-r--r-- 1 boinc boinc      6380 Dec  3 09:09 init_data.xml
[2025-12-03 15:57:13] -rw-r--r-- 1 boinc boinc         0 Dec  3 09:09 boinc_lockfile
[2025-12-03 15:57:13] -rw-r--r-- 1 boinc boinc      2773 Dec  3 09:09 pandaJob.out
[2025-12-03 15:57:13] -rw------- 1 boinc boinc    985779 Dec  3 09:09 agis_schedconf.cvmfs.json
[2025-12-03 15:57:13] drwx------ 5 boinc boinc      4096 Dec  3 09:09 pilot3
[2025-12-03 15:57:13] -rw-r--r-- 1 boinc boinc       532 Dec  3 15:52 boinc_task_state.xml
[2025-12-03 15:57:13] -rw------- 1 boinc boinc 907025607 Dec  3 15:55 HITS.47493068._001415.pool.root.1
[2025-12-03 15:57:13] -rw------- 1 boinc boinc      1027 Dec  3 15:56 memory_monitor_summary.json
[2025-12-03 15:57:13] -rw------- 1 boinc boinc   1516240 Dec  3 15:56 agis_ddmendpoints.agis.ALL.json
[2025-12-03 15:57:13] -rw------- 1 boinc boinc   1247483 Dec  3 15:56 log.47493068._001415.job.log.tgz.1
[2025-12-03 15:57:13] -rw------- 1 boinc boinc      8577 Dec  3 15:56 heartbeat.json
[2025-12-03 15:57:13] -rw------- 1 boinc boinc        95 Dec  3 15:56 pilot_heartbeat.json
[2025-12-03 15:57:13] -rw-r--r-- 1 boinc boinc      8192 Dec  3 15:56 boinc_mmap_file
[2025-12-03 15:57:13] -rw-r--r-- 1 boinc boinc        28 Dec  3 15:56 wrapper_checkpoint.txt
[2025-12-03 15:57:13] -rw------- 1 boinc boinc      4750 Dec  3 15:57 pilotlog.txt
[2025-12-03 15:57:13] -rw------- 1 boinc boinc   3434778 Dec  3 15:57 log.47493068._001415.job.log.1
[2025-12-03 15:57:13] -rw------- 1 boinc boinc       353 Dec  3 15:57 output.list
[2025-12-03 15:57:13] -rw-r--r-- 1 boinc boinc       620 Dec  3 15:57 runtime_log
[2025-12-03 15:57:13] -rw------- 1 boinc boinc   4700160 Dec  3 15:57 result.tar.gz
[2025-12-03 15:57:13] -rw-r--r-- 1 boinc boinc      8788 Dec  3 15:57 runtime_log.err
[2025-12-03 15:57:13] -rw------- 1 boinc boinc       667 Dec  3 15:57 d5pNDmdqcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuTFKDmK086Rm.diag
[2025-12-03 15:57:13] -rw-r--r-- 1 boinc boinc     20989 Dec  3 15:57 stderr.txt
[2025-12-03 15:57:13] HITS file was successfully produced:
[2025-12-03 15:57:13] -rw------- 1 boinc boinc 907025607 Dec  3 15:55 shared/HITS.pool.root.1
[2025-12-03 15:57:13]  *** Contents of shared directory: ***
[2025-12-03 15:57:13] total 1290744
[2025-12-03 15:57:13] -rw-r--r-- 2 boinc boinc 409373983 Dec  3 09:09 ATLAS.root_0
[2025-12-03 15:57:13] -rw-r--r-- 2 boinc boinc    590099 Dec  3 09:09 input.tar.gz
[2025-12-03 15:57:13] -rw-r--r-- 2 boinc boinc     15120 Dec  3 09:09 start_atlas.sh
[2025-12-03 15:57:13] -rw------- 1 boinc boinc 907025607 Dec  3 15:55 HITS.pool.root.1
[2025-12-03 15:57:13] -rw------- 1 boinc boinc   4700160 Dec  3 15:57 result.tar.gz
15:57:15 (56273): run_atlas exited; CPU time 95447.108646
15:57:15 (56273): called boinc_finish(0)

</stderr_txt>
]]>

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