Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:59:34 (27223): wrapper (7.7.26015): starting
21:59:34 (27223): wrapper: running run_atlas (--nthreads 8)
[2025-11-30 21:59:34] Arguments: --nthreads 8
[2025-11-30 21:59:34] Threads: 8
[2025-11-30 21:59:34] Checking for CVMFS
[2025-11-30 21:59:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 21:59:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 21:59:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 21:59:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 21:59:34] 2.11.2.0 10816 124286 138428 153501 3 101 11897977 18432001 1831 130560 0 90598966 99.976 5223129 28918 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-30 21:59:34] CVMFS is ok
[2025-11-30 21:59:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 21:59:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 21:59:34] Further information can be found at the LHC@home message board.
[2025-11-30 21:59:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 21:59:34] Checking for apptainer binary...
[2025-11-30 21:59:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 21:59:34] Running /usr/bin/apptainer --version
[2025-11-30 21:59:34] apptainer version 1.3.2-1.el7
[2025-11-30 21:59:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 21:59:35] c-206-11.aglt2.org
[2025-11-30 21:59:35] apptainer works
[2025-11-30 21:59:35] Set ATHENA_PROC_NUMBER=8
[2025-11-30 21:59:35] Set ATHENA_CORE_NUMBER=8
[2025-11-30 21:59:35] Starting ATLAS job with PandaID=6897931686
[2025-11-30 21:59:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 14:43:41]  *** The last 200 lines of the pilot log: ***
[2025-12-01 14:43:41] 2025-12-01 19:43:08,437 | INFO     | time since job start (60202s) is within the limit (172800.0s)
[2025-12-01 14:43:41] 2025-12-01 19:43:09,378 | INFO     | monitor loop #4320: job 0:6897931686 is in state 'finished'
[2025-12-01 14:43:41] 2025-12-01 19:43:09,378 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-01 14:43:41] 2025-12-01 19:43:09,885 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-01 14:43:41] 2025-12-01 19:43:09,891 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2411.375
[2025-12-01 14:43:41] 2025-12-01 19:43:09,894 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897931686/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 14:43:41] 2025-12-01 19:43:09,894 | INFO     | extracted standard info from prmon json
[2025-12-01 14:43:41] 2025-12-01 19:43:09,894 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 14:43:41] 2025-12-01 19:43:09,895 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 14:43:41] 2025-12-01 19:43:09,907 | INFO     | fitting pss+swap vs Time
[2025-12-01 14:43:41] 2025-12-01 19:43:09,908 | INFO     | sum of square deviations: 298144534175.6978
[2025-12-01 14:43:41] 2025-12-01 19:43:09,926 | INFO     | sum of deviations: 1629712418755.09
[2025-12-01 14:43:41] 2025-12-01 19:43:09,926 | INFO     | mean x: 1764588090.7183385
[2025-12-01 14:43:41] 2025-12-01 19:43:09,926 | INFO     | mean y: 3355916.3708206685
[2025-12-01 14:43:41] 2025-12-01 19:43:09,926 | INFO     | intersect: -9642204527.599304
[2025-12-01 14:43:41] 2025-12-01 19:43:09,927 | INFO     | chi2: 7.093566827641965
[2025-12-01 14:43:41] 2025-12-01 19:43:09,928 | INFO     | sum of square deviations: 293636563565.6052
[2025-12-01 14:43:41] 2025-12-01 19:43:09,945 | INFO     | sum of deviations: 2000009610698.3289
[2025-12-01 14:43:41] 2025-12-01 19:43:09,945 | INFO     | mean x: 1764587938.2219958
[2025-12-01 14:43:41] 2025-12-01 19:43:09,945 | INFO     | mean y: 3368435.4755600817
[2025-12-01 14:43:41] 2025-12-01 19:43:09,945 | INFO     | intersect: -12015546349.902786
[2025-12-01 14:43:41] 2025-12-01 19:43:09,946 | INFO     | chi2: 4.072634708461803
[2025-12-01 14:43:41] 2025-12-01 19:43:09,946 | INFO     | current chi2=4.072634708461803 (change=42.586926895624615 %)
[2025-12-01 14:43:41] 2025-12-01 19:43:09,947 | INFO     | sum of square deviations: 289174268230.4861
[2025-12-01 14:43:41] 2025-12-01 19:43:09,964 | INFO     | sum of deviations: 2190850161853.2544
[2025-12-01 14:43:41] 2025-12-01 19:43:09,964 | INFO     | mean x: 1764587785.7256908
[2025-12-01 14:43:41] 2025-12-01 19:43:09,964 | INFO     | mean y: 3374957.4002047083
[2025-12-01 14:43:41] 2025-12-01 19:43:09,964 | INFO     | intersect: -13365544274.652819
[2025-12-01 14:43:41] 2025-12-01 19:43:09,965 | INFO     | chi2: 3.1994202636573172
[2025-12-01 14:43:41] 2025-12-01 19:43:09,965 | INFO     | current chi2=3.1994202636573172 (change=21.441020550902557 %)
[2025-12-01 14:43:41] 2025-12-01 19:43:09,965 | INFO     | right removable region: 976
[2025-12-01 14:43:41] 2025-12-01 19:43:09,966 | INFO     | sum of square deviations: 293636131075.60535
[2025-12-01 14:43:41] 2025-12-01 19:43:09,983 | INFO     | sum of deviations: 1314518674416.7617
[2025-12-01 14:43:41] 2025-12-01 19:43:09,983 | INFO     | mean x: 1764588243.2219958
[2025-12-01 14:43:41] 2025-12-01 19:43:09,983 | INFO     | mean y: 3366563.918533605
[2025-12-01 14:43:41] 2025-12-01 19:43:09,983 | INFO     | intersect: -7896152442.393174
[2025-12-01 14:43:41] 2025-12-01 19:43:09,984 | INFO     | chi2: 4.781715710053927
[2025-12-01 14:43:41] 2025-12-01 19:43:09,984 | INFO     | current chi2=4.781715710053927 (change=32.5908132503848 %)
[2025-12-01 14:43:41] 2025-12-01 19:43:09,985 | INFO     | sum of square deviations: 289173583079.82996
[2025-12-01 14:43:41] 2025-12-01 19:43:10,001 | INFO     | sum of deviations: 1242679204887.172
[2025-12-01 14:43:41] 2025-12-01 19:43:10,002 | INFO     | mean x: 1764588395.7226202
[2025-12-01 14:43:41] 2025-12-01 19:43:10,002 | INFO     | mean y: 3369018.277379734
[2025-12-01 14:43:41] 2025-12-01 19:43:10,002 | INFO     | intersect: -7579679478.736823
[2025-12-01 14:43:41] 2025-12-01 19:43:10,003 | INFO     | chi2: 4.732106877726984
[2025-12-01 14:43:41] 2025-12-01 19:43:10,003 | INFO     | current chi2=4.732106877726984 (change=1.0374692962744767 %)
[2025-12-01 14:43:41] 2025-12-01 19:43:10,003 | INFO     | left removable region: 20
[2025-12-01 14:43:41] 2025-12-01 19:43:10,004 | INFO     | sum of square deviations: 270925014855.91177
[2025-12-01 14:43:41] 2025-12-01 19:43:10,020 | INFO     | sum of deviations: 1710994232274.8418
[2025-12-01 14:43:41] 2025-12-01 19:43:10,020 | INFO     | mean x: 1764588365.2311716
[2025-12-01 14:43:41] 2025-12-01 19:43:10,020 | INFO     | mean y: 3394318.616108787
[2025-12-01 14:43:41] 2025-12-01 19:43:10,020 | INFO     | intersect: -11140650526.617369
[2025-12-01 14:43:41] 2025-12-01 19:43:10,021 | INFO     | chi2: 0.5820875282200343
[2025-12-01 14:43:41] 2025-12-01 19:43:10,022 | INFO     | current memory leak: 6.32 B/s (using 956 data points, chi2=0.58)
[2025-12-01 14:43:41] 2025-12-01 19:43:10,022 | INFO     | could have reported an average CPU frequency of 2631 MHz (36 samples)
[2025-12-01 14:43:41] 2025-12-01 19:43:10,022 | INFO     | ..............................
[2025-12-01 14:43:41] 2025-12-01 19:43:10,023 | INFO     | . Timing measurements:
[2025-12-01 14:43:41] 2025-12-01 19:43:10,023 | INFO     | . get job = 0 s
[2025-12-01 14:43:41] 2025-12-01 19:43:10,023 | INFO     | . initial setup = 2 s
[2025-12-01 14:43:41] 2025-12-01 19:43:10,023 | INFO     | . payload setup = 9 s
[2025-12-01 14:43:41] 2025-12-01 19:43:10,023 | INFO     | . stage-in = 0 s
[2025-12-01 14:43:41] 2025-12-01 19:43:10,023 | INFO     | . payload execution = 60162 s
[2025-12-01 14:43:41] 2025-12-01 19:43:10,023 | INFO     | . stage-out = 3 s
[2025-12-01 14:43:41] 2025-12-01 19:43:10,023 | INFO     | . log creation = 0 s
[2025-12-01 14:43:41] 2025-12-01 19:43:10,023 | INFO     | ..............................
[2025-12-01 14:43:41] 2025-12-01 19:43:10,268 | INFO     | 
[2025-12-01 14:43:41] 2025-12-01 19:43:10,268 | INFO     | job summary report
[2025-12-01 14:43:41] 2025-12-01 19:43:10,268 | INFO     | --------------------------------------------------
[2025-12-01 14:43:41] 2025-12-01 19:43:10,268 | INFO     | PanDA job id: 6897931686
[2025-12-01 14:43:41] 2025-12-01 19:43:10,268 | INFO     | task id: 47538121
[2025-12-01 14:43:41] 2025-12-01 19:43:10,269 | INFO     | errors: (none)
[2025-12-01 14:43:41] 2025-12-01 19:43:10,269 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 14:43:41] 2025-12-01 19:43:10,269 | INFO     | pilot state: finished 
[2025-12-01 14:43:41] 2025-12-01 19:43:10,269 | INFO     | transexitcode: 0
[2025-12-01 14:43:41] 2025-12-01 19:43:10,269 | INFO     | exeerrorcode: 0
[2025-12-01 14:43:41] 2025-12-01 19:43:10,269 | INFO     | exeerrordiag: 
[2025-12-01 14:43:41] 2025-12-01 19:43:10,270 | INFO     | exitcode: 0
[2025-12-01 14:43:41] 2025-12-01 19:43:10,270 | INFO     | exitmsg: OK
[2025-12-01 14:43:41] 2025-12-01 19:43:10,270 | INFO     | cpuconsumptiontime: 459591 s
[2025-12-01 14:43:41] 2025-12-01 19:43:10,270 | INFO     | nevents: 1000
[2025-12-01 14:43:41] 2025-12-01 19:43:10,270 | INFO     | neventsw: 0
[2025-12-01 14:43:41] 2025-12-01 19:43:10,270 | INFO     | pid: 7058
[2025-12-01 14:43:41] 2025-12-01 19:43:10,271 | INFO     | pgrp: 7058
[2025-12-01 14:43:41] 2025-12-01 19:43:10,271 | INFO     | corecount: 8
[2025-12-01 14:43:41] 2025-12-01 19:43:10,271 | INFO     | event service: False
[2025-12-01 14:43:41] 2025-12-01 19:43:10,271 | INFO     | sizes: {0: 2284337, 1: 2284479, 4: 2284741, 12: 2284769, 60175: 2355290, 60180: 2364284, 60183: 2364468, 60187: 2364714}
[2025-12-01 14:43:41] 2025-12-01 19:43:10,271 | INFO     | --------------------------------------------------
[2025-12-01 14:43:41] 2025-12-01 19:43:10,271 | INFO     | 
[2025-12-01 14:43:41] 2025-12-01 19:43:10,272 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-01 14:43:41] 2025-12-01 19:43:10,286 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 14:43:41] 2025-12-01 19:43:10,286 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 14:43:41] 2025-12-01 19:43:10,287 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 14:43:41] 2025-12-01 19:43:10,287 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 14:43:41] 2025-12-01 19:43:10,287 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 14:43:41] 2025-12-01 19:43:10,287 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 14:43:41] 2025-12-01 19:43:10,287 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 14:43:41] 2025-12-01 19:43:10,287 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 14:43:41] 2025-12-01 19:43:10,287 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 14:43:41] 2025-12-01 19:43:10,287 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 14:43:41] 2025-12-01 19:43:10,287 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 14:43:41] 2025-12-01 19:43:10,288 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 14:43:41] 2025-12-01 19:43:10,288 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 14:43:41] 2025-12-01 19:43:10,288 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 14:43:41] 2025-12-01 19:43:10,288 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 14:43:41] 2025-12-01 19:43:10,288 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 14:43:41] 2025-12-01 19:43:10,288 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 14:43:41] 2025-12-01 19:43:10,288 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 14:43:41] 2025-12-01 19:43:10,288 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 14:43:41] 2025-12-01 19:43:10,288 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 14:43:41] 2025-12-01 19:43:10,289 | INFO     | job 6897931686 has completed (purged errors)
[2025-12-01 14:43:41] 2025-12-01 19:43:10,289 | INFO     | overall cleanup function is called
[2025-12-01 14:43:41] 2025-12-01 19:43:11,305 | INFO     | --- collectZombieJob: --- 10, [7058]
[2025-12-01 14:43:41] 2025-12-01 19:43:11,305 | INFO     | zombie collector waiting for pid 7058
[2025-12-01 14:43:41] 2025-12-01 19:43:11,305 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 14:43:41] 2025-12-01 19:43:11,305 | INFO     | collected zombie processes
[2025-12-01 14:43:41] 2025-12-01 19:43:11,305 | INFO     | will attempt to kill all subprocesses of pid=7058
[2025-12-01 14:43:41] 2025-12-01 19:43:11,476 | INFO     | process IDs to be killed: [7058] (in reverse order)
[2025-12-01 14:43:41] 2025-12-01 19:43:11,522 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 14:43:41] 2025-12-01 19:43:11,532 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 14:43:41] 2025-12-01 19:43:11,537 | INFO     | did not find any defunct processes belonging to 7058
[2025-12-01 14:43:41] 2025-12-01 19:43:11,541 | INFO     | did not find any defunct processes belonging to 7058
[2025-12-01 14:43:41] 2025-12-01 19:43:11,543 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 14:43:41] 2025-12-01 19:43:11,543 | INFO     | ready for new job
[2025-12-01 14:43:41] 2025-12-01 19:43:11,544 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 14:43:41] 2025-12-01 19:43:11,548 | INFO     | ***************************************
[2025-12-01 14:43:41] 2025-12-01 19:43:11,548 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 14:43:41] 2025-12-01 19:43:11,549 | INFO     | ***************************************
[2025-12-01 14:43:41] 2025-12-01 19:43:11,549 | INFO     | 
[2025-12-01 14:43:41] 2025-12-01 19:43:11,550 | INFO     | architecture information:
[2025-12-01 14:43:41] 2025-12-01 19:43:11,551 | INFO     | executing command: cat /etc/os-release
[2025-12-01 14:43:41] 2025-12-01 19:43:11,707 | INFO     | cat /etc/os-release:
[2025-12-01 14:43:41] NAME="CentOS Linux"
[2025-12-01 14:43:41] VERSION="7 (Core)"
[2025-12-01 14:43:41] ID="centos"
[2025-12-01 14:43:41] ID_LIKE="rhel fedora"
[2025-12-01 14:43:41] VERSION_ID="7"
[2025-12-01 14:43:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 14:43:41] ANSI_COLOR="0;31"
[2025-12-01 14:43:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 14:43:41] HOME_URL="https://www.centos.org/"
[2025-12-01 14:43:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 14:43:41] 
[2025-12-01 14:43:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 14:43:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 14:43:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 14:43:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 14:43:41] 
[2025-12-01 14:43:41] 2025-12-01 19:43:11,707 | INFO     | ***************************************
[2025-12-01 14:43:41] 2025-12-01 19:43:12,210 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-01 14:43:41] 2025-12-01 19:43:12,220 | INFO     | sufficient remaining disk space (26681016320 B)
[2025-12-01 14:43:41] 2025-12-01 19:43:12,220 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 14:43:41] 2025-12-01 19:43:12,220 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 14:43:41] 2025-12-01 19:43:12,220 | INFO     | update_server=False
[2025-12-01 14:43:41] 2025-12-01 19:43:12,220 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 14:43:41] 2025-12-01 19:43:12,221 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 14:43:41] 2025-12-01 19:43:12,847 | INFO     | all data control threads have been joined
[2025-12-01 14:43:41] 2025-12-01 19:43:12,887 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 14:43:41] 2025-12-01 19:43:12,887 | INFO     | aborting loop
[2025-12-01 14:43:41] 2025-12-01 19:43:13,143 | INFO     | all payload control threads have been joined
[2025-12-01 14:43:41] 2025-12-01 19:43:13,226 | INFO     | [job] retrieve thread has finished
[2025-12-01 14:43:41] 2025-12-01 19:43:13,288 | INFO     | [payload] validate_post thread has finished
[2025-12-01 14:43:41] 2025-12-01 19:43:13,485 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 14:43:41] 2025-12-01 19:43:13,690 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 14:43:41] 2025-12-01 19:43:13,708 | INFO     | [job] validate thread has finished
[2025-12-01 14:43:41] 2025-12-01 19:43:13,757 | INFO     | all job control threads have been joined
[2025-12-01 14:43:41] 2025-12-01 19:43:13,766 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 14:43:41] 2025-12-01 19:43:13,853 | INFO     | [data] control thread has finished
[2025-12-01 14:43:41] 2025-12-01 19:43:13,892 | INFO     | [job] job monitor thread has finished
[2025-12-01 14:43:41] 2025-12-01 19:43:14,145 | INFO     | [payload] control thread has finished
[2025-12-01 14:43:41] 2025-12-01 19:43:14,342 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 14:43:41] 2025-12-01 19:43:14,495 | INFO     | [data] copytool_in thread has finished
[2025-12-01 14:43:41] 2025-12-01 19:43:14,570 | INFO     | [payload] failed_post thread has finished
[2025-12-01 14:43:41] 2025-12-01 19:43:14,587 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 14:43:41] 2025-12-01 19:43:14,763 | INFO     | [job] control thread has finished
[2025-12-01 14:43:41] 2025-12-01 19:43:15,178 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 14:43:41] 2025-12-01 19:43:15,490 | INFO     | [data] copytool_out thread has finished
[2025-12-01 14:43:41] 2025-12-01 19:43:16,180 | INFO     | [job] queue monitor thread has finished
[2025-12-01 14:43:41] 2025-12-01 19:43:16,227 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 14:43:41] 2025-12-01 19:43:25,584 | INFO     | [monitor] cgroup control has ended
[2025-12-01 14:43:41] 2025-12-01 19:43:27,211 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139928816789312)>', '<ExcThread(monitor, started 139928088344320)>']
[2025-12-01 14:43:41] 2025-12-01 19:43:32,236 | INFO     | all workflow threads have been joined
[2025-12-01 14:43:41] 2025-12-01 19:43:32,236 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 14:43:41] 2025-12-01 19:43:32,275 | INFO     | traces error code: 0
[2025-12-01 14:43:41] 2025-12-01 19:43:32,275 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 14:43:41] 2025-12-01 19:43:41,656 | INFO     | PID=30910 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-01 14:43:41] 2025-12-01 19:43:41,657 | INFO     | .. there are 3 such processes running
[2025-12-01 14:43:41] 2025-12-01 19:43:41,657 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 14:43:41] 2025-12-01 19:43:41,657 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 14:43:41] 2025-12-01 19:43:41,658 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 14:43:41] 2025-12-01 19:43:41,658 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 14:43:41] 2025-12-01 19:43:41,658 | INFO     | [monitor] control thread has ended
[2025-12-01 14:43:41] 2025-12-01 19:43:41,789 [wrapper] ==== pilot stdout END ====
[2025-12-01 14:43:41] 2025-12-01 19:43:41,791 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 14:43:41] 2025-12-01 19:43:41,793 [wrapper] pilotpid: 30910
[2025-12-01 14:43:41] 2025-12-01 19:43:41,795 [wrapper] Pilot exit status: 0
[2025-12-01 14:43:41] 2025-12-01 19:43:41,802 [wrapper] pandaids: 6897931686
[2025-12-01 14:43:41] 2025-12-01 19:43:41,830 [wrapper] cleanup supervisor_pilot 20561 30911
[2025-12-01 14:43:41] 2025-12-01 19:43:41,832 [wrapper] Test setup, not cleaning
[2025-12-01 14:43:41] 2025-12-01 19:43:41,835 [wrapper] apfmon messages muted
[2025-12-01 14:43:41] 2025-12-01 19:43:41,837 [wrapper] ==== wrapper stdout END ====
[2025-12-01 14:43:41] 2025-12-01 19:43:41,839 [wrapper] ==== wrapper stderr END ====
[2025-12-01 14:43:41]  *** Error codes and diagnostics ***
[2025-12-01 14:43:41]     "exeErrorCode": 0,
[2025-12-01 14:43:41]     "exeErrorDiag": "",
[2025-12-01 14:43:41]     "pilotErrorCode": 0,
[2025-12-01 14:43:41]     "pilotErrorDiag": "",
[2025-12-01 14:43:41]  *** Listing of results directory ***
[2025-12-01 14:43:41] total 1075216
[2025-12-01 14:43:41] -rw-r--r-- 1 boincer umatlas    576529 Nov 28 17:41 pilot3.tar.gz
[2025-12-01 14:43:41] -rw-r--r-- 1 boincer umatlas      5112 Nov 28 17:43 queuedata.json
[2025-12-01 14:43:41] -rwx------ 1 boincer umatlas     36292 Nov 28 17:44 runpilot2-wrapper.sh
[2025-12-01 14:43:41] -rw-r--r-- 1 boincer umatlas       100 Nov 30 21:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 14:43:41] -rwxr-xr-x 1 boincer umatlas      7986 Nov 30 21:59 run_atlas
[2025-12-01 14:43:41] -rw-r--r-- 1 boincer umatlas       105 Nov 30 21:59 job.xml
[2025-12-01 14:43:41] -rw-r--r-- 2 boincer umatlas 376859118 Nov 30 21:59 EVNT.47528880._000058.pool.root.1
[2025-12-01 14:43:41] -rw-r--r-- 2 boincer umatlas     15847 Nov 30 21:59 start_atlas.sh
[2025-12-01 14:43:41] drwxrwx--x 2 boincer umatlas      4096 Nov 30 21:59 shared
[2025-12-01 14:43:41] -rw-r--r-- 2 boincer umatlas    590125 Nov 30 21:59 input.tar.gz
[2025-12-01 14:43:41] -rw-r--r-- 1 boincer umatlas         0 Nov 30 21:59 boinc_lockfile
[2025-12-01 14:43:41] -rw-r--r-- 1 boincer umatlas      2880 Nov 30 21:59 pandaJob.out
[2025-12-01 14:43:41] -rw------- 1 boincer umatlas        57 Nov 30 21:59 setup.sh.local
[2025-12-01 14:43:41] -rw------- 1 boincer umatlas    993253 Nov 30 21:59 agis_schedconf.cvmfs.json
[2025-12-01 14:43:41] drwx------ 5 boincer umatlas      4096 Nov 30 21:59 pilot3
[2025-12-01 14:43:41] -rw-r--r-- 1 boincer umatlas       533 Dec  1 14:27 boinc_task_state.xml
[2025-12-01 14:43:41] -rw-r--r-- 1 boincer umatlas      5954 Dec  1 14:38 init_data.xml
[2025-12-01 14:43:41] -rw------- 1 boincer umatlas 698885181 Dec  1 14:42 HITS.47538121._000578.pool.root.1
[2025-12-01 14:43:41] -rw------- 1 boincer umatlas        95 Dec  1 14:42 pilot_heartbeat.json
[2025-12-01 14:43:41] -rw------- 1 boincer umatlas      1066 Dec  1 14:42 memory_monitor_summary.json
[2025-12-01 14:43:41] -rw------- 1 boincer umatlas   1516240 Dec  1 14:43 agis_ddmendpoints.agis.ALL.json
[2025-12-01 14:43:41] -rw------- 1 boincer umatlas   2286597 Dec  1 14:43 log.47538121._000578.job.log.tgz.1
[2025-12-01 14:43:41] -rw------- 1 boincer umatlas     27035 Dec  1 14:43 heartbeat.json
[2025-12-01 14:43:41] -rw-r--r-- 1 boincer umatlas      8192 Dec  1 14:43 boinc_mmap_file
[2025-12-01 14:43:41] -rw-r--r-- 1 boincer umatlas        29 Dec  1 14:43 wrapper_checkpoint.txt
[2025-12-01 14:43:41] -rw------- 1 boincer umatlas       820 Dec  1 14:43 pilotlog.txt
[2025-12-01 14:43:41] -rw------- 1 boincer umatlas   8374795 Dec  1 14:43 log.47538121._000578.job.log.1
[2025-12-01 14:43:41] -rw------- 1 boincer umatlas       353 Dec  1 14:43 output.list
[2025-12-01 14:43:41] -rw-r--r-- 1 boincer umatlas       620 Dec  1 14:43 runtime_log
[2025-12-01 14:43:41] -rw------- 1 boincer umatlas  10700800 Dec  1 14:43 result.tar.gz
[2025-12-01 14:43:41] -rw-r--r-- 1 boincer umatlas      9343 Dec  1 14:43 runtime_log.err
[2025-12-01 14:43:41] -rw------- 1 boincer umatlas       668 Dec  1 14:43 12aKDmHNMj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPpOKDmJMvjtn.diag
[2025-12-01 14:43:41] -rw-r--r-- 1 boincer umatlas     21293 Dec  1 14:43 stderr.txt
[2025-12-01 14:43:41] HITS file was successfully produced:
[2025-12-01 14:43:41] -rw------- 1 boincer umatlas 698885181 Dec  1 14:42 shared/HITS.pool.root.1
[2025-12-01 14:43:41]  *** Contents of shared directory: ***
[2025-12-01 14:43:41] total 1061588
[2025-12-01 14:43:41] -rw-r--r-- 2 boincer umatlas 376859118 Nov 30 21:59 ATLAS.root_0
[2025-12-01 14:43:41] -rw-r--r-- 2 boincer umatlas     15847 Nov 30 21:59 start_atlas.sh
[2025-12-01 14:43:41] -rw-r--r-- 2 boincer umatlas    590125 Nov 30 21:59 input.tar.gz
[2025-12-01 14:43:41] -rw------- 1 boincer umatlas 698885181 Dec  1 14:42 HITS.pool.root.1
[2025-12-01 14:43:41] -rw------- 1 boincer umatlas  10700800 Dec  1 14:43 result.tar.gz
14:43:43 (27223): run_atlas exited; CPU time 457976.814437
14:43:43 (27223): called boinc_finish(0)

</stderr_txt>
]]>

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