Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:37:07 (3239423): wrapper (7.7.26015): starting
18:37:07 (3239423): wrapper: running run_atlas (--nthreads 12)
[2025-11-30 18:37:07] Arguments: --nthreads 12
[2025-11-30 18:37:07] Threads: 12
[2025-11-30 18:37:07] Checking for CVMFS
[2025-11-30 18:37:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 18:37:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 18:37:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 18:37:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 18:37:08] 2.11.5.0 3156847 25 48232 153501 2 75 26114096 45568000 0 130560 0 262279 99.478 203372 12690 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-30 18:37:08] CVMFS is ok
[2025-11-30 18:37:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 18:37:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 18:37:08] Further information can be found at the LHC@home message board.
[2025-11-30 18:37:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 18:37:08] Checking for apptainer binary...
[2025-11-30 18:37:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 18:37:08] Running /usr/bin/apptainer --version
[2025-11-30 18:37:08] apptainer version 1.4.1-1.el9
[2025-11-30 18:37:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 18:37:08] wns0052.triumf.lcg
[2025-11-30 18:37:08] apptainer works
[2025-11-30 18:37:08] Set ATHENA_PROC_NUMBER=12
[2025-11-30 18:37:08] Set ATHENA_CORE_NUMBER=12
[2025-11-30 18:37:08] Starting ATLAS job with PandaID=6905457659
[2025-11-30 18:37:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 18:43:31]  *** The last 200 lines of the pilot log: ***
[2025-11-30 18:43:31] 2025-12-01 02:42:22,072 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-30 18:43:31] 2025-12-01 02:42:22,072 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-30 18:43:31] 2025-12-01 02:42:22,073 | WARNING  | wrong length of table data, x=[1764556686.0, 1764556747.0, 1764556808.0], y=[1983.0, 696992.0, 817514.0] (must be same and length>=4)
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | could have reported an average CPU frequency of 1863 MHz (4 samples)
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | ..............................
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . Timing measurements:
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . get job = 0 s
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . initial setup = 3 s
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . payload setup = 17 s
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . stage-in = 0 s
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . payload execution = 133 s
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . stage-out = 0 s
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . log creation = 0 s
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | ..............................
[2025-11-30 18:43:31] 2025-12-01 02:42:22,075 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-30 18:43:31] 2025-12-01 02:42:22,075 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905457659/pilotlog.txt
[2025-11-30 18:43:31] 2025-12-01 02:42:22,091 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-30 18:43:31] - Log from pilotlog.txt -
[2025-11-30 18:43:31] 2025-12-01 02:42:22,071 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6905457659/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 18:43:31] 2025-12-01 02:42:22,071 | INFO     | extracted standard info from prmon json
[2025-11-30 18:43:31] 2025-12-01 02:42:22,071 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 18:43:31] 2025-12-01 02:42:22,072 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 18:43:31] 2025-12-01 02:42:22,072 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-30 18:43:31] 2025-12-01 02:42:22,072 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-30 18:43:31] 2025-12-01 02:42:22,073 | WARNING  | wrong length of table data, x=[1764556686.0, 1764556747.0, 1764556808.0], y=[1983.0, 696992.0, 817514.0] (must be same and length>=4)
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | could have reported an average CPU frequency of 1863 MHz (4 samples)
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | ..............................
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . Timing measurements:
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . get job = 0 s
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . initial setup = 3 s
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . payload setup = 17 s
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . stage-in = 0 s
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . payload execution = 133 s
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . stage-out = 0 s
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . log creation = 0 s
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | ..............................
[2025-11-30 18:43:31] 2025-12-01 02:42:22,075 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-30 18:43:31] 2025-12-01 02:42:22,075 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905457659/pilotlog.txt
[2025-11-30 18:43:31] 2025-12-01 02:42:22,091 | WARNING  | 
[2025-11-30 18:43:31] [begin log extracts]
[2025-11-30 18:43:31] - Log from pilotlog.txt -
[2025-11-30 18:43:31] 2025-12-01 02:42:22,071 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6905457659/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 18:43:31] 2025-12-01 02:42:22,071 | INFO     | extracted standard info from prmon json
[2025-11-30 18:43:31] 2025-12-01 02:42:22,071 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 18:43:31] 2025-12-01 02:42:22,072 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 18:43:31] 2025-12-01 02:42:22,072 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-30 18:43:31] 2025-12-01 02:42:22,072 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-30 18:43:31] 2025-12-01 02:42:22,073 | WARNING  | wrong length of table data, x=[1764556686.0, 1764556747.0, 1764556808.0], y=[1983.0, 696992.0, 817514.0] (must be same and length>=4)
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | could have reported an average CPU frequency of 1863 MHz (4 samples)
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | ..............................
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . Timing measurements:
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . get job = 0 s
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . initial setup = 3 s
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . payload setup = 17 s
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . stage-in = 0 s
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . payload execution = 133 s
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . stage-out = 0 s
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | . log creation = 0 s
[2025-11-30 18:43:31] 2025-12-01 02:42:22,074 | INFO     | ..............................
[2025-11-30 18:43:31] 2025-12-01 02:42:22,075 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-30 18:43:31] 2025-12-01 02:42:22,075 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905457659/pilotlog.txt
[2025-11-30 18:43:31] [end log extracts]
[2025-11-30 18:43:31] 2025-12-01 02:42:22,091 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-30 18:43:31] 2025-12-01 02:42:22,092 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-30 18:43:31] 2025-12-01 02:42:22,162 | INFO     | 
[2025-11-30 18:43:31] 2025-12-01 02:42:22,163 | INFO     | job summary report
[2025-11-30 18:43:31] 2025-12-01 02:42:22,163 | INFO     | --------------------------------------------------
[2025-11-30 18:43:31] 2025-12-01 02:42:22,163 | INFO     | PanDA job id: 6905457659
[2025-11-30 18:43:31] 2025-12-01 02:42:22,163 | INFO     | task id: 47530725
[2025-11-30 18:43:31] 2025-12-01 02:42:22,163 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-30 18:40:09,726 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-30 18:43:31] 2025-12-01 02:42:22,163 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-30 18:43:31] 2025-12-01 02:42:22,164 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 18:43:31] 2025-12-01 02:42:22,164 | INFO     | pilot state: failed 
[2025-11-30 18:43:31] 2025-12-01 02:42:22,164 | INFO     | transexitcode: 65
[2025-11-30 18:43:31] 2025-12-01 02:42:22,164 | INFO     | exeerrorcode: 65
[2025-11-30 18:43:31] 2025-12-01 02:42:22,164 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-30 18:43:31] 2025-12-01 02:42:22,164 | INFO     | exitcode: 65
[2025-11-30 18:43:31] 2025-12-01 02:42:22,164 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-30 18:43:31] 2025-12-01 02:42:22,164 | INFO     | cpuconsumptiontime: 92 s
[2025-11-30 18:43:31] 2025-12-01 02:42:22,164 | INFO     | nevents: 0
[2025-11-30 18:43:31] 2025-12-01 02:42:22,165 | INFO     | neventsw: 0
[2025-11-30 18:43:31] 2025-12-01 02:42:22,165 | INFO     | pid: 3250332
[2025-11-30 18:43:31] 2025-12-01 02:42:22,165 | INFO     | pgrp: 3250332
[2025-11-30 18:43:31] 2025-12-01 02:42:22,165 | INFO     | corecount: 12
[2025-11-30 18:43:31] 2025-12-01 02:42:22,165 | INFO     | event service: False
[2025-11-30 18:43:31] 2025-12-01 02:42:22,165 | INFO     | sizes: {0: 2284285, 1: 2284427, 8: 2284689, 11: 2284717, 155: 2308243, 156: 2312689, 280: 2312827}
[2025-11-30 18:43:31] 2025-12-01 02:42:22,165 | INFO     | --------------------------------------------------
[2025-11-30 18:43:31] 2025-12-01 02:42:22,165 | INFO     | 
[2025-11-30 18:43:31] 2025-12-01 02:42:22,166 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-30 18:43:31] 2025-12-01 02:42:22,191 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 18:43:31] 2025-12-01 02:42:22,191 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 18:43:31] 2025-12-01 02:42:22,192 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 18:43:31] 2025-12-01 02:42:22,192 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 18:43:31] 2025-12-01 02:42:22,192 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 18:43:31] 2025-12-01 02:42:22,192 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 18:43:31] 2025-12-01 02:42:22,192 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 18:43:31] 2025-12-01 02:42:22,192 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 18:43:31] 2025-12-01 02:42:22,192 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 18:43:31] 2025-12-01 02:42:22,193 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 18:43:31] 2025-12-01 02:42:22,193 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 18:43:31] 2025-12-01 02:42:22,193 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 18:43:31] 2025-12-01 02:42:22,193 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 18:43:31] 2025-12-01 02:42:22,193 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 18:43:31] 2025-12-01 02:42:22,193 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 18:43:31] 2025-12-01 02:42:22,193 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 18:43:31] 2025-12-01 02:42:22,193 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 18:43:31] 2025-12-01 02:42:22,194 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 18:43:31] 2025-12-01 02:42:22,194 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 18:43:31] 2025-12-01 02:42:22,194 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 18:43:31] 2025-12-01 02:42:22,194 | INFO     | job 6905457659 has completed (purged errors)
[2025-11-30 18:43:31] 2025-12-01 02:42:22,194 | INFO     | overall cleanup function is called
[2025-11-30 18:43:31] 2025-12-01 02:42:23,204 | INFO     | --- collectZombieJob: --- 10, [3250332]
[2025-11-30 18:43:31] 2025-12-01 02:42:23,204 | INFO     | zombie collector waiting for pid 3250332
[2025-11-30 18:43:31] 2025-12-01 02:42:23,204 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 18:43:31] 2025-12-01 02:42:23,204 | INFO     | collected zombie processes
[2025-11-30 18:43:31] 2025-12-01 02:42:23,204 | INFO     | will attempt to kill all subprocesses of pid=3250332
[2025-11-30 18:43:31] 2025-12-01 02:42:23,323 | INFO     | process IDs to be killed: [3250332] (in reverse order)
[2025-11-30 18:43:31] 2025-12-01 02:42:23,374 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 18:43:31] 2025-12-01 02:42:23,375 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 18:43:31] 2025-12-01 02:42:23,382 | INFO     | did not find any defunct processes belonging to 3250332
[2025-11-30 18:43:31] 2025-12-01 02:42:23,387 | INFO     | did not find any defunct processes belonging to 3250332
[2025-11-30 18:43:31] 2025-12-01 02:42:23,387 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 18:43:31] 2025-12-01 02:42:23,387 | INFO     | ready for new job
[2025-11-30 18:43:31] 2025-12-01 02:42:23,388 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 18:43:31] 2025-12-01 02:42:23,389 | INFO     | ***************************************
[2025-11-30 18:43:31] 2025-12-01 02:42:23,389 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 18:43:31] 2025-12-01 02:42:23,389 | INFO     | ***************************************
[2025-11-30 18:43:31] 2025-12-01 02:42:23,389 | INFO     | 
[2025-11-30 18:43:31] 2025-12-01 02:42:23,391 | INFO     | architecture information:
[2025-11-30 18:43:31] 2025-12-01 02:42:23,392 | INFO     | executing command: cat /etc/os-release
[2025-11-30 18:43:31] 2025-12-01 02:42:23,407 | INFO     | cat /etc/os-release:
[2025-11-30 18:43:31] NAME="CentOS Linux"
[2025-11-30 18:43:31] VERSION="7 (Core)"
[2025-11-30 18:43:31] ID="centos"
[2025-11-30 18:43:31] ID_LIKE="rhel fedora"
[2025-11-30 18:43:31] VERSION_ID="7"
[2025-11-30 18:43:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 18:43:31] ANSI_COLOR="0;31"
[2025-11-30 18:43:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 18:43:31] HOME_URL="https://www.centos.org/"
[2025-11-30 18:43:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 18:43:31] 
[2025-11-30 18:43:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 18:43:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 18:43:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 18:43:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 18:43:31] 
[2025-11-30 18:43:31] 2025-12-01 02:42:23,407 | INFO     | ***************************************
[2025-11-30 18:43:31] 2025-12-01 02:42:23,911 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-30 18:43:31] 2025-12-01 02:42:23,930 | INFO     | sufficient remaining disk space (2242894626816 B)
[2025-11-30 18:43:31] 2025-12-01 02:42:23,930 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 18:43:31] 2025-12-01 02:42:23,931 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 18:43:31] 2025-12-01 02:42:23,931 | INFO     | update_server=False
[2025-11-30 18:43:31] 2025-12-01 02:42:23,931 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 18:43:31] 2025-12-01 02:42:23,932 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 18:43:31] 2025-12-01 02:42:23,932 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 18:43:31] 2025-12-01 02:42:23,954 | INFO     | all job control threads have been joined
[2025-11-30 18:43:31] 2025-12-01 02:42:24,677 | INFO     | all payload control threads have been joined
[2025-11-30 18:43:31] 2025-12-01 02:42:24,933 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 18:43:31] 2025-12-01 02:42:24,933 | INFO     | aborting loop
[2025-11-30 18:43:31] 2025-12-01 02:42:24,937 | INFO     | [job] retrieve thread has finished
[2025-11-30 18:43:31] 2025-12-01 02:42:24,938 | INFO     | [job] queue monitor thread has finished
[2025-11-30 18:43:31] 2025-12-01 02:42:24,960 | INFO     | [job] control thread has finished
[2025-11-30 18:43:31] 2025-12-01 02:42:24,992 | INFO     | all data control threads have been joined
[2025-11-30 18:43:31] 2025-12-01 02:42:25,125 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 18:43:31] 2025-12-01 02:42:25,419 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 18:43:31] 2025-12-01 02:42:25,505 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 18:43:31] 2025-12-01 02:42:25,637 | INFO     | [job] validate thread has finished
[2025-11-30 18:43:31] 2025-12-01 02:42:25,683 | INFO     | [payload] control thread has finished
[2025-11-30 18:43:31] 2025-12-01 02:42:25,720 | INFO     | [payload] failed_post thread has finished
[2025-11-30 18:43:31] 2025-12-01 02:42:25,762 | INFO     | [payload] validate_post thread has finished
[2025-11-30 18:43:31] 2025-12-01 02:42:25,823 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 18:43:31] 2025-12-01 02:42:25,890 | INFO     | [data] copytool_in thread has finished
[2025-11-30 18:43:31] 2025-12-01 02:42:25,938 | INFO     | [data] copytool_out thread has finished
[2025-11-30 18:43:31] 2025-12-01 02:42:25,939 | INFO     | [job] job monitor thread has finished
[2025-11-30 18:43:31] 2025-12-01 02:42:25,982 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 18:43:31] 2025-12-01 02:42:25,998 | INFO     | [data] control thread has finished
[2025-11-30 18:43:31] 2025-12-01 02:42:29,511 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 18:43:31] 2025-12-01 02:42:54,485 | INFO     | PID=3243107 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-30 18:43:31] 2025-12-01 02:42:54,485 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 18:43:31] 2025-12-01 02:42:54,485 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 18:43:31] 2025-12-01 02:42:54,486 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 18:43:31] 2025-12-01 02:43:23,787 | INFO     | [monitor] cgroup control has ended
[2025-11-30 18:43:31] 2025-12-01 02:43:25,758 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140673360607040)>', '<ExcThread(monitor, started 140672820553472)>']
[2025-11-30 18:43:31] 2025-12-01 02:43:26,648 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 18:43:31] 2025-12-01 02:43:26,649 | INFO     | [monitor] control thread has ended
[2025-11-30 18:43:31] 2025-12-01 02:43:30,784 | INFO     | all workflow threads have been joined
[2025-11-30 18:43:31] 2025-12-01 02:43:30,784 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 18:43:31] 2025-12-01 02:43:30,785 | INFO     | traces error code: 0
[2025-11-30 18:43:31] 2025-12-01 02:43:30,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 18:43:31] 2025-12-01 02:43:30,888 [wrapper] ==== pilot stdout END ====
[2025-11-30 18:43:31] 2025-12-01 02:43:30,893 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 18:43:31] 2025-12-01 02:43:30,897 [wrapper] pilotpid: 3243107
[2025-11-30 18:43:31] 2025-12-01 02:43:30,902 [wrapper] Pilot exit status: 0
[2025-11-30 18:43:31] 2025-12-01 02:43:30,918 [wrapper] pandaids: 6905457659
[2025-11-30 18:43:31] 2025-12-01 02:43:30,975 [wrapper] cleanup supervisor_pilot 3243113 3243108
[2025-11-30 18:43:31] 2025-12-01 02:43:30,980 [wrapper] Test setup, not cleaning
[2025-11-30 18:43:31] 2025-12-01 02:43:30,985 [wrapper] apfmon messages muted
[2025-11-30 18:43:31] 2025-12-01 02:43:30,990 [wrapper] ==== wrapper stdout END ====
[2025-11-30 18:43:31] 2025-12-01 02:43:30,994 [wrapper] ==== wrapper stderr END ====
[2025-11-30 18:43:31]  *** Error codes and diagnostics ***
[2025-11-30 18:43:31]     "exeErrorCode": 65,
[2025-11-30 18:43:31]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-30 18:43:31]     "pilotErrorCode": 1305,
[2025-11-30 18:43:31]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-30 18:43:31]  *** Listing of results directory ***
[2025-11-30 18:43:31] total 370088
[2025-11-30 18:43:31] -rwx------. 1 boinc boinc     36292 Nov 29 16:21 runpilot2-wrapper.sh
[2025-11-30 18:43:31] -rw-r--r--. 1 boinc boinc    576529 Nov 29 16:24 pilot3.tar.gz
[2025-11-30 18:43:31] -rw-r--r--. 1 boinc boinc      5112 Nov 29 16:27 queuedata.json
[2025-11-30 18:43:31] -rw-r--r--. 1 boinc boinc       100 Nov 30 18:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 18:43:31] -rwxr-xr-x. 1 boinc boinc      7986 Nov 30 18:37 run_atlas
[2025-11-30 18:43:31] -rw-r--r--. 1 boinc boinc       105 Nov 30 18:37 job.xml
[2025-11-30 18:43:31] -rw-r--r--. 1 boinc boinc      6592 Nov 30 18:37 init_data.xml
[2025-11-30 18:43:31] -rw-r--r--. 2 boinc boinc 374746322 Nov 30 18:37 EVNT.47530720._000129.pool.root.1
[2025-11-30 18:43:31] -rw-r--r--. 2 boinc boinc     15847 Nov 30 18:37 start_atlas.sh
[2025-11-30 18:43:31] drwxrwx--x. 2 boinc boinc      4096 Nov 30 18:37 shared
[2025-11-30 18:43:31] -rw-r--r--. 2 boinc boinc    590131 Nov 30 18:37 input.tar.gz
[2025-11-30 18:43:31] -rw-r--r--. 1 boinc boinc         0 Nov 30 18:37 boinc_lockfile
[2025-11-30 18:43:31] -rw-r--r--. 1 boinc boinc      2879 Nov 30 18:37 pandaJob.out
[2025-11-30 18:43:31] -rw-------. 1 boinc boinc    993253 Nov 30 18:37 agis_schedconf.cvmfs.json
[2025-11-30 18:43:31] -rw-------. 1 boinc boinc   1516240 Nov 30 18:37 agis_ddmendpoints.agis.ALL.json
[2025-11-30 18:43:31] drwx------. 5 boinc boinc      4096 Nov 30 18:37 pilot3
[2025-11-30 18:43:31] -rw-r--r--. 1 boinc boinc       524 Nov 30 18:39 boinc_task_state.xml
[2025-11-30 18:43:31] -rw-------. 1 boinc boinc       993 Nov 30 18:40 memory_monitor_summary.json
[2025-11-30 18:43:31] -rw-------. 1 boinc boinc     50907 Nov 30 18:40 log.47530725._002683.job.log.tgz.1
[2025-11-30 18:43:31] -rw-------. 1 boinc boinc      9887 Nov 30 18:42 heartbeat.json
[2025-11-30 18:43:31] -rw-------. 1 boinc boinc        95 Nov 30 18:42 pilot_heartbeat.json
[2025-11-30 18:43:31] -rw-r--r--. 1 boinc boinc      8192 Nov 30 18:43 boinc_mmap_file
[2025-11-30 18:43:31] -rw-r--r--. 1 boinc boinc        23 Nov 30 18:43 wrapper_checkpoint.txt
[2025-11-30 18:43:31] -rw-------. 1 boinc boinc      4747 Nov 30 18:43 pilotlog.txt
[2025-11-30 18:43:31] -rw-------. 1 boinc boinc    104196 Nov 30 18:43 log.47530725._002683.job.log.1
[2025-11-30 18:43:31] -rw-------. 1 boinc boinc       186 Nov 30 18:43 output.list
[2025-11-30 18:43:31] -rw-r--r--. 1 boinc boinc       620 Nov 30 18:43 runtime_log
[2025-11-30 18:43:31] -rw-------. 1 boinc boinc    174080 Nov 30 18:43 result.tar.gz
[2025-11-30 18:43:31] -rw-r--r--. 1 boinc boinc      8636 Nov 30 18:43 runtime_log.err
[2025-11-30 18:43:31] -rw-------. 1 boinc boinc       642 Nov 30 18:43 aS7MDm3Mkj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2HMKDmwrc1on.diag
[2025-11-30 18:43:31] -rw-r--r--. 1 boinc boinc     22534 Nov 30 18:43 stderr.txt
[2025-11-30 18:43:31] No HITS result produced
[2025-11-30 18:43:31]  *** Contents of shared directory: ***
[2025-11-30 18:43:31] total 366736
[2025-11-30 18:43:31] -rw-r--r--. 2 boinc boinc 374746322 Nov 30 18:37 ATLAS.root_0
[2025-11-30 18:43:31] -rw-r--r--. 2 boinc boinc     15847 Nov 30 18:37 start_atlas.sh
[2025-11-30 18:43:31] -rw-r--r--. 2 boinc boinc    590131 Nov 30 18:37 input.tar.gz
[2025-11-30 18:43:31] -rw-------. 1 boinc boinc    174080 Nov 30 18:43 result.tar.gz
18:43:32 (3239423): run_atlas exited; CPU time 78.576147
18:43:32 (3239423): called boinc_finish(0)

</stderr_txt>
]]>

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