Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:48:41 (26226): wrapper (7.7.26015): starting
20:48:41 (26226): wrapper: running run_atlas (--nthreads 8)
[2025-11-30 20:48:41] Arguments: --nthreads 8
[2025-11-30 20:48:41] Threads: 8
[2025-11-30 20:48:41] Checking for CVMFS
[2025-11-30 20:48:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 20:48:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 20:48:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 20:48:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 20:48:42] 2.11.2.0 2781 78170 82004 153500 1 69 11050075 20275200 1 130560 0 22833082 99.876 4486762 33884 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-30 20:48:42] CVMFS is ok
[2025-11-30 20:48:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 20:48:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 20:48:42] Further information can be found at the LHC@home message board.
[2025-11-30 20:48:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 20:48:42] Checking for apptainer binary...
[2025-11-30 20:48:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 20:48:42] Running /usr/bin/apptainer --version
[2025-11-30 20:48:42] apptainer version 1.3.2-1.el7
[2025-11-30 20:48:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 20:48:43] c-115-16.aglt2.org
[2025-11-30 20:48:43] apptainer works
[2025-11-30 20:48:43] Set ATHENA_PROC_NUMBER=8
[2025-11-30 20:48:43] Set ATHENA_CORE_NUMBER=8
[2025-11-30 20:48:43] Starting ATLAS job with PandaID=6905332187
[2025-11-30 20:48:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 06:32:04]  *** The last 200 lines of the pilot log: ***
[2025-12-01 06:32:04] 2025-12-01 11:31:11,834 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-01 06:32:04] 2025-12-01 11:31:12,009 | INFO     | time since job start (34932s) is within the limit (172800.0s)
[2025-12-01 06:32:04] 2025-12-01 11:31:12,753 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-01 06:32:04] 2025-12-01 11:31:12,756 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1779.0
[2025-12-01 06:32:04] 2025-12-01 11:31:12,758 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6905332187/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 06:32:04] 2025-12-01 11:31:12,759 | INFO     | extracted standard info from prmon json
[2025-12-01 06:32:04] 2025-12-01 11:31:12,759 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 06:32:04] 2025-12-01 11:31:12,759 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 06:32:04] 2025-12-01 11:31:12,768 | INFO     | fitting pss+swap vs Time
[2025-12-01 06:32:04] 2025-12-01 11:31:12,769 | INFO     | sum of square deviations: 58032029401.76739
[2025-12-01 06:32:04] 2025-12-01 11:31:12,775 | INFO     | sum of deviations: 578999396255.3121
[2025-12-01 06:32:04] 2025-12-01 11:31:12,775 | INFO     | mean x: 1764571194.0751748
[2025-12-01 06:32:04] 2025-12-01 11:31:12,776 | INFO     | mean y: 3603690.388111888
[2025-12-01 06:32:04] 2025-12-01 11:31:12,776 | INFO     | intersect: -17601943910.67382
[2025-12-01 06:32:04] 2025-12-01 11:31:12,776 | INFO     | chi2: 4.972694175786399
[2025-12-01 06:32:04] 2025-12-01 11:31:12,777 | INFO     | sum of square deviations: 56523580530.09859
[2025-12-01 06:32:04] 2025-12-01 11:31:12,784 | INFO     | sum of deviations: 779436215917.8517
[2025-12-01 06:32:04] 2025-12-01 11:31:12,784 | INFO     | mean x: 1764571041.580247
[2025-12-01 06:32:04] 2025-12-01 11:31:12,784 | INFO     | mean y: 3623928.915343915
[2025-12-01 06:32:04] 2025-12-01 11:31:12,784 | INFO     | intersect: -24329062756.3372
[2025-12-01 06:32:04] 2025-12-01 11:31:12,784 | INFO     | chi2: 2.6391215759247517
[2025-12-01 06:32:04] 2025-12-01 11:31:12,785 | INFO     | current chi2=2.6391215759247517 (change=46.92773207780485 %)
[2025-12-01 06:32:04] 2025-12-01 11:31:12,785 | INFO     | sum of square deviations: 55041435438.23465
[2025-12-01 06:32:04] 2025-12-01 11:31:12,791 | INFO     | sum of deviations: 798059152945.3093
[2025-12-01 06:32:04] 2025-12-01 11:31:12,792 | INFO     | mean x: 1764570889.0818505
[2025-12-01 06:32:04] 2025-12-01 11:31:12,792 | INFO     | mean y: 3625828.9715302493
[2025-12-01 06:32:04] 2025-12-01 11:31:12,792 | INFO     | intersect: -25581316457.51509
[2025-12-01 06:32:04] 2025-12-01 11:31:12,792 | INFO     | chi2: 2.5278007720229123
[2025-12-01 06:32:04] 2025-12-01 11:31:12,792 | INFO     | current chi2=2.5278007720229123 (change=4.218100633080249 %)
[2025-12-01 06:32:04] 2025-12-01 11:31:12,793 | INFO     | right removable region: 561
[2025-12-01 06:32:04] 2025-12-01 11:31:12,793 | INFO     | sum of square deviations: 56523379840.09863
[2025-12-01 06:32:04] 2025-12-01 11:31:12,799 | INFO     | sum of deviations: 376171359581.9132
[2025-12-01 06:32:04] 2025-12-01 11:31:12,800 | INFO     | mean x: 1764571346.580247
[2025-12-01 06:32:04] 2025-12-01 11:31:12,800 | INFO     | mean y: 3624150.331569665
[2025-12-01 06:32:04] 2025-12-01 11:31:12,800 | INFO     | intersect: -11739856236.01789
[2025-12-01 06:32:04] 2025-12-01 11:31:12,800 | INFO     | chi2: 2.540168495011826
[2025-12-01 06:32:04] 2025-12-01 11:31:12,801 | INFO     | current chi2=2.540168495011826 (change=48.917661026075166 %)
[2025-12-01 06:32:04] 2025-12-01 11:31:12,801 | INFO     | sum of square deviations: 55041171918.234695
[2025-12-01 06:32:04] 2025-12-01 11:31:12,807 | INFO     | sum of deviations: 343482586994.44165
[2025-12-01 06:32:04] 2025-12-01 11:31:12,808 | INFO     | mean x: 1764571499.0818505
[2025-12-01 06:32:04] 2025-12-01 11:31:12,808 | INFO     | mean y: 3627510.7295373664
[2025-12-01 06:32:04] 2025-12-01 11:31:12,808 | INFO     | intersect: -11008121736.573427
[2025-12-01 06:32:04] 2025-12-01 11:31:12,808 | INFO     | chi2: 2.5157726461036383
[2025-12-01 06:32:04] 2025-12-01 11:31:12,808 | INFO     | current chi2=2.5157726461036383 (change=0.9604027825750329 %)
[2025-12-01 06:32:04] 2025-12-01 11:31:12,809 | INFO     | left removable region: 20
[2025-12-01 06:32:04] 2025-12-01 11:31:12,809 | INFO     | sum of square deviations: 49098824734.72094
[2025-12-01 06:32:04] 2025-12-01 11:31:12,815 | INFO     | sum of deviations: 524329976384.24396
[2025-12-01 06:32:04] 2025-12-01 11:31:12,815 | INFO     | mean x: 1764571468.5914972
[2025-12-01 06:32:04] 2025-12-01 11:31:12,815 | INFO     | mean y: 3654213.661737523
[2025-12-01 06:32:04] 2025-12-01 11:31:12,815 | INFO     | intersect: -18840334852.345566
[2025-12-01 06:32:04] 2025-12-01 11:31:12,816 | INFO     | chi2: 0.04282629563761249
[2025-12-01 06:32:04] 2025-12-01 11:31:12,816 | INFO     | current memory leak: 10.68 B/s (using 541 data points, chi2=0.04)
[2025-12-01 06:32:04] 2025-12-01 11:31:12,816 | INFO     | could have reported an average CPU frequency of 2334 MHz (23 samples)
[2025-12-01 06:32:04] 2025-12-01 11:31:12,817 | INFO     | ..............................
[2025-12-01 06:32:04] 2025-12-01 11:31:12,817 | INFO     | . Timing measurements:
[2025-12-01 06:32:04] 2025-12-01 11:31:12,817 | INFO     | . get job = 0 s
[2025-12-01 06:32:04] 2025-12-01 11:31:12,817 | INFO     | . initial setup = 2 s
[2025-12-01 06:32:04] 2025-12-01 11:31:12,817 | INFO     | . payload setup = 15 s
[2025-12-01 06:32:04] 2025-12-01 11:31:12,817 | INFO     | . stage-in = 0 s
[2025-12-01 06:32:04] 2025-12-01 11:31:12,817 | INFO     | . payload execution = 34884 s
[2025-12-01 06:32:04] 2025-12-01 11:31:12,817 | INFO     | . stage-out = 3 s
[2025-12-01 06:32:04] 2025-12-01 11:31:12,818 | INFO     | . log creation = 0 s
[2025-12-01 06:32:04] 2025-12-01 11:31:12,818 | INFO     | ..............................
[2025-12-01 06:32:04] 2025-12-01 11:31:12,899 | INFO     | 
[2025-12-01 06:32:04] 2025-12-01 11:31:12,899 | INFO     | job summary report
[2025-12-01 06:32:04] 2025-12-01 11:31:12,899 | INFO     | --------------------------------------------------
[2025-12-01 06:32:04] 2025-12-01 11:31:12,899 | INFO     | PanDA job id: 6905332187
[2025-12-01 06:32:04] 2025-12-01 11:31:12,899 | INFO     | task id: 47530725
[2025-12-01 06:32:04] 2025-12-01 11:31:12,900 | INFO     | errors: (none)
[2025-12-01 06:32:04] 2025-12-01 11:31:12,900 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 06:32:04] 2025-12-01 11:31:12,900 | INFO     | pilot state: finished 
[2025-12-01 06:32:04] 2025-12-01 11:31:12,900 | INFO     | transexitcode: 0
[2025-12-01 06:32:04] 2025-12-01 11:31:12,900 | INFO     | exeerrorcode: 0
[2025-12-01 06:32:04] 2025-12-01 11:31:12,901 | INFO     | exeerrordiag: 
[2025-12-01 06:32:04] 2025-12-01 11:31:12,901 | INFO     | exitcode: 0
[2025-12-01 06:32:04] 2025-12-01 11:31:12,901 | INFO     | exitmsg: OK
[2025-12-01 06:32:04] 2025-12-01 11:31:12,901 | INFO     | cpuconsumptiontime: 270808 s
[2025-12-01 06:32:04] 2025-12-01 11:31:12,901 | INFO     | nevents: 1000
[2025-12-01 06:32:04] 2025-12-01 11:31:12,901 | INFO     | neventsw: 0
[2025-12-01 06:32:04] 2025-12-01 11:31:12,902 | INFO     | pid: 5723
[2025-12-01 06:32:04] 2025-12-01 11:31:12,902 | INFO     | pgrp: 5723
[2025-12-01 06:32:04] 2025-12-01 11:31:12,902 | INFO     | corecount: 8
[2025-12-01 06:32:04] 2025-12-01 11:31:12,902 | INFO     | event service: False
[2025-12-01 06:32:04] 2025-12-01 11:31:12,902 | INFO     | sizes: {0: 2284399, 6: 2284661, 11: 2284689, 34903: 2346144, 34907: 2355138, 34908: 2355194, 34915: 2355568}
[2025-12-01 06:32:04] 2025-12-01 11:31:12,902 | INFO     | --------------------------------------------------
[2025-12-01 06:32:04] 2025-12-01 11:31:12,903 | INFO     | 
[2025-12-01 06:32:04] 2025-12-01 11:31:12,903 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-01 06:32:04] 2025-12-01 11:31:12,929 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 06:32:04] 2025-12-01 11:31:12,930 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 06:32:04] 2025-12-01 11:31:12,930 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 06:32:04] 2025-12-01 11:31:12,930 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 06:32:04] 2025-12-01 11:31:12,931 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 06:32:04] 2025-12-01 11:31:12,931 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 06:32:04] 2025-12-01 11:31:12,931 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 06:32:04] 2025-12-01 11:31:12,931 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 06:32:04] 2025-12-01 11:31:12,931 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 06:32:04] 2025-12-01 11:31:12,932 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 06:32:04] 2025-12-01 11:31:12,932 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 06:32:04] 2025-12-01 11:31:12,932 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 06:32:04] 2025-12-01 11:31:12,932 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 06:32:04] 2025-12-01 11:31:12,932 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 06:32:04] 2025-12-01 11:31:12,932 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 06:32:04] 2025-12-01 11:31:12,933 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 06:32:04] 2025-12-01 11:31:12,933 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 06:32:04] 2025-12-01 11:31:12,933 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 06:32:04] 2025-12-01 11:31:12,933 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 06:32:04] 2025-12-01 11:31:12,933 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 06:32:04] 2025-12-01 11:31:12,934 | INFO     | job 6905332187 has completed (purged errors)
[2025-12-01 06:32:04] 2025-12-01 11:31:12,934 | INFO     | overall cleanup function is called
[2025-12-01 06:32:04] 2025-12-01 11:31:13,949 | INFO     | --- collectZombieJob: --- 10, [5723]
[2025-12-01 06:32:04] 2025-12-01 11:31:13,950 | INFO     | zombie collector waiting for pid 5723
[2025-12-01 06:32:04] 2025-12-01 11:31:13,950 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 06:32:04] 2025-12-01 11:31:13,950 | INFO     | collected zombie processes
[2025-12-01 06:32:04] 2025-12-01 11:31:13,950 | INFO     | will attempt to kill all subprocesses of pid=5723
[2025-12-01 06:32:04] 2025-12-01 11:31:14,037 | INFO     | process IDs to be killed: [5723] (in reverse order)
[2025-12-01 06:32:04] 2025-12-01 11:31:14,092 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 06:32:04] 2025-12-01 11:31:14,092 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 06:32:04] 2025-12-01 11:31:14,097 | INFO     | did not find any defunct processes belonging to 5723
[2025-12-01 06:32:04] 2025-12-01 11:31:14,099 | INFO     | did not find any defunct processes belonging to 5723
[2025-12-01 06:32:04] 2025-12-01 11:31:14,101 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 06:32:04] 2025-12-01 11:31:14,102 | INFO     | ready for new job
[2025-12-01 06:32:04] 2025-12-01 11:31:14,102 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 06:32:04] 2025-12-01 11:31:14,105 | INFO     | ***************************************
[2025-12-01 06:32:04] 2025-12-01 11:31:14,105 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 06:32:04] 2025-12-01 11:31:14,105 | INFO     | ***************************************
[2025-12-01 06:32:04] 2025-12-01 11:31:14,105 | INFO     | 
[2025-12-01 06:32:04] 2025-12-01 11:31:14,106 | INFO     | architecture information:
[2025-12-01 06:32:04] 2025-12-01 11:31:14,106 | INFO     | executing command: cat /etc/os-release
[2025-12-01 06:32:04] 2025-12-01 11:31:14,124 | INFO     | cat /etc/os-release:
[2025-12-01 06:32:04] NAME="CentOS Linux"
[2025-12-01 06:32:04] VERSION="7 (Core)"
[2025-12-01 06:32:04] ID="centos"
[2025-12-01 06:32:04] ID_LIKE="rhel fedora"
[2025-12-01 06:32:04] VERSION_ID="7"
[2025-12-01 06:32:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 06:32:04] ANSI_COLOR="0;31"
[2025-12-01 06:32:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 06:32:04] HOME_URL="https://www.centos.org/"
[2025-12-01 06:32:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 06:32:04] 
[2025-12-01 06:32:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 06:32:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 06:32:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 06:32:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 06:32:04] 
[2025-12-01 06:32:04] 2025-12-01 11:31:14,124 | INFO     | ***************************************
[2025-12-01 06:32:04] 2025-12-01 11:31:14,626 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-01 06:32:04] 2025-12-01 11:31:14,646 | INFO     | sufficient remaining disk space (17744003072 B)
[2025-12-01 06:32:04] 2025-12-01 11:31:14,647 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 06:32:04] 2025-12-01 11:31:14,647 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 06:32:04] 2025-12-01 11:31:14,648 | INFO     | update_server=False
[2025-12-01 06:32:04] 2025-12-01 11:31:14,648 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 06:32:04] 2025-12-01 11:31:14,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 06:32:04] 2025-12-01 11:31:14,697 | INFO     | all job control threads have been joined
[2025-12-01 06:32:04] 2025-12-01 11:31:15,225 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 06:32:04] 2025-12-01 11:31:15,348 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 06:32:04] 2025-12-01 11:31:15,348 | INFO     | aborting loop
[2025-12-01 06:32:04] 2025-12-01 11:31:15,489 | INFO     | all data control threads have been joined
[2025-12-01 06:32:04] 2025-12-01 11:31:15,653 | INFO     | [job] retrieve thread has finished
[2025-12-01 06:32:04] 2025-12-01 11:31:15,654 | INFO     | [job] queue monitor thread has finished
[2025-12-01 06:32:04] 2025-12-01 11:31:15,702 | INFO     | [job] control thread has finished
[2025-12-01 06:32:04] 2025-12-01 11:31:15,723 | INFO     | [data] copytool_in thread has finished
[2025-12-01 06:32:04] 2025-12-01 11:31:16,045 | INFO     | all payload control threads have been joined
[2025-12-01 06:32:04] 2025-12-01 11:31:16,059 | INFO     | [payload] failed_post thread has finished
[2025-12-01 06:32:04] 2025-12-01 11:31:16,188 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 06:32:04] 2025-12-01 11:31:16,217 | INFO     | [payload] validate_post thread has finished
[2025-12-01 06:32:04] 2025-12-01 11:31:16,353 | INFO     | [job] job monitor thread has finished
[2025-12-01 06:32:04] 2025-12-01 11:31:16,361 | INFO     | [job] validate thread has finished
[2025-12-01 06:32:04] 2025-12-01 11:31:16,374 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 06:32:04] 2025-12-01 11:31:16,406 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 06:32:04] 2025-12-01 11:31:16,494 | INFO     | [data] control thread has finished
[2025-12-01 06:32:04] 2025-12-01 11:31:16,601 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 06:32:04] 2025-12-01 11:31:17,050 | INFO     | [payload] control thread has finished
[2025-12-01 06:32:04] 2025-12-01 11:31:17,231 | INFO     | [data] copytool_out thread has finished
[2025-12-01 06:32:04] 2025-12-01 11:31:20,194 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 06:32:04] 2025-12-01 11:31:24,811 | INFO     | job.realtimelogging is not enabled
[2025-12-01 06:32:04] 2025-12-01 11:31:25,817 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 06:32:04] 2025-12-01 11:31:44,113 | INFO     | 34936s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-01 06:32:04] 2025-12-01 11:31:45,222 | INFO     | PID=29912 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-01 06:32:04] 2025-12-01 11:31:45,222 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 06:32:04] 2025-12-01 11:31:45,222 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 06:32:04] 2025-12-01 11:31:45,222 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 06:32:04] 2025-12-01 11:31:57,884 | INFO     | [monitor] cgroup control has ended
[2025-12-01 06:32:04] 2025-12-01 11:31:59,389 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139912514803520)>', '<ExcThread(monitor, started 139911764104960)>']
[2025-12-01 06:32:04] 2025-12-01 11:32:00,295 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 06:32:04] 2025-12-01 11:32:00,296 | INFO     | [monitor] control thread has ended
[2025-12-01 06:32:04] 2025-12-01 11:32:04,414 | INFO     | all workflow threads have been joined
[2025-12-01 06:32:04] 2025-12-01 11:32:04,415 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 06:32:04] 2025-12-01 11:32:04,415 | INFO     | traces error code: 0
[2025-12-01 06:32:04] 2025-12-01 11:32:04,416 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 06:32:04] 2025-12-01 11:32:04,522 [wrapper] ==== pilot stdout END ====
[2025-12-01 06:32:04] 2025-12-01 11:32:04,526 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 06:32:04] 2025-12-01 11:32:04,530 [wrapper] pilotpid: 29912
[2025-12-01 06:32:04] 2025-12-01 11:32:04,535 [wrapper] Pilot exit status: 0
[2025-12-01 06:32:04] 2025-12-01 11:32:04,550 [wrapper] pandaids: 6905332187
[2025-12-01 06:32:04] 2025-12-01 11:32:04,599 [wrapper] cleanup supervisor_pilot  5140 29913
[2025-12-01 06:32:04] 2025-12-01 11:32:04,603 [wrapper] Test setup, not cleaning
[2025-12-01 06:32:04] 2025-12-01 11:32:04,608 [wrapper] apfmon messages muted
[2025-12-01 06:32:04] 2025-12-01 11:32:04,613 [wrapper] ==== wrapper stdout END ====
[2025-12-01 06:32:04] 2025-12-01 11:32:04,617 [wrapper] ==== wrapper stderr END ====
[2025-12-01 06:32:04]  *** Error codes and diagnostics ***
[2025-12-01 06:32:04]     "exeErrorCode": 0,
[2025-12-01 06:32:04]     "exeErrorDiag": "",
[2025-12-01 06:32:04]     "pilotErrorCode": 0,
[2025-12-01 06:32:04]     "pilotErrorDiag": "",
[2025-12-01 06:32:04]  *** Listing of results directory ***
[2025-12-01 06:32:04] total 1080168
[2025-12-01 06:32:04] -rwx------ 1 boincer umatlas     36292 Nov 29 19:20 runpilot2-wrapper.sh
[2025-12-01 06:32:04] -rw-r--r-- 1 boincer umatlas    576529 Nov 29 19:24 pilot3.tar.gz
[2025-12-01 06:32:04] -rw-r--r-- 1 boincer umatlas      5112 Nov 29 19:24 queuedata.json
[2025-12-01 06:32:04] -rw-r--r-- 1 boincer umatlas       100 Nov 30 20:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 06:32:04] -rwxr-xr-x 1 boincer umatlas      7986 Nov 30 20:48 run_atlas
[2025-12-01 06:32:04] -rw-r--r-- 1 boincer umatlas       105 Nov 30 20:48 job.xml
[2025-12-01 06:32:04] -rw-r--r-- 2 boincer umatlas 376935797 Nov 30 20:48 EVNT.47530720._000042.pool.root.1
[2025-12-01 06:32:04] -rw-r--r-- 2 boincer umatlas     15847 Nov 30 20:48 start_atlas.sh
[2025-12-01 06:32:04] drwxrwx--x 2 boincer umatlas      4096 Nov 30 20:48 shared
[2025-12-01 06:32:04] -rw-r--r-- 2 boincer umatlas    590131 Nov 30 20:48 input.tar.gz
[2025-12-01 06:32:04] -rw-r--r-- 1 boincer umatlas         0 Nov 30 20:48 boinc_lockfile
[2025-12-01 06:32:04] -rw-r--r-- 1 boincer umatlas      2878 Nov 30 20:48 pandaJob.out
[2025-12-01 06:32:04] -rw------- 1 boincer umatlas        57 Nov 30 20:48 setup.sh.local
[2025-12-01 06:32:04] -rw------- 1 boincer umatlas    993253 Nov 30 20:48 agis_schedconf.cvmfs.json
[2025-12-01 06:32:04] drwx------ 5 boincer umatlas      4096 Nov 30 20:49 pilot3
[2025-12-01 06:32:04] -rw-r--r-- 1 boincer umatlas       533 Dec  1 06:23 boinc_task_state.xml
[2025-12-01 06:32:04] -rw-r--r-- 1 boincer umatlas      5913 Dec  1 06:27 init_data.xml
[2025-12-01 06:32:04] -rw------- 1 boincer umatlas 711635716 Dec  1 06:30 HITS.47530725._001861.pool.root.1
[2025-12-01 06:32:04] -rw------- 1 boincer umatlas      1063 Dec  1 06:30 memory_monitor_summary.json
[2025-12-01 06:32:04] -rw------- 1 boincer umatlas   1516240 Dec  1 06:31 agis_ddmendpoints.agis.ALL.json
[2025-12-01 06:32:04] -rw------- 1 boincer umatlas   1956123 Dec  1 06:31 log.47530725._001861.job.log.tgz.1
[2025-12-01 06:32:04] -rw------- 1 boincer umatlas        95 Dec  1 06:31 pilot_heartbeat.json
[2025-12-01 06:32:04] -rw------- 1 boincer umatlas     29097 Dec  1 06:31 heartbeat.json
[2025-12-01 06:32:04] -rw-r--r-- 1 boincer umatlas      8192 Dec  1 06:32 boinc_mmap_file
[2025-12-01 06:32:04] -rw-r--r-- 1 boincer umatlas        29 Dec  1 06:32 wrapper_checkpoint.txt
[2025-12-01 06:32:04] -rw------- 1 boincer umatlas      4934 Dec  1 06:32 pilotlog.txt
[2025-12-01 06:32:04] -rw------- 1 boincer umatlas   4822203 Dec  1 06:32 log.47530725._001861.job.log.1
[2025-12-01 06:32:04] -rw------- 1 boincer umatlas       353 Dec  1 06:32 output.list
[2025-12-01 06:32:04] -rw-r--r-- 1 boincer umatlas       620 Dec  1 06:32 runtime_log
[2025-12-01 06:32:04] -rw------- 1 boincer umatlas   6819840 Dec  1 06:32 result.tar.gz
[2025-12-01 06:32:04] -rw-r--r-- 1 boincer umatlas      9343 Dec  1 06:32 runtime_log.err
[2025-12-01 06:32:04] -rw------- 1 boincer umatlas       668 Dec  1 06:32 aaLNDmZMkj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnEMKDmLgxgDm.diag
[2025-12-01 06:32:04] -rw-r--r-- 1 boincer umatlas     21284 Dec  1 06:32 stderr.txt
[2025-12-01 06:32:04] HITS file was successfully produced:
[2025-12-01 06:32:04] -rw------- 1 boincer umatlas 711635716 Dec  1 06:30 shared/HITS.pool.root.1
[2025-12-01 06:32:04]  *** Contents of shared directory: ***
[2025-12-01 06:32:04] total 1070324
[2025-12-01 06:32:04] -rw-r--r-- 2 boincer umatlas 376935797 Nov 30 20:48 ATLAS.root_0
[2025-12-01 06:32:04] -rw-r--r-- 2 boincer umatlas     15847 Nov 30 20:48 start_atlas.sh
[2025-12-01 06:32:04] -rw-r--r-- 2 boincer umatlas    590131 Nov 30 20:48 input.tar.gz
[2025-12-01 06:32:04] -rw------- 1 boincer umatlas 711635716 Dec  1 06:30 HITS.pool.root.1
[2025-12-01 06:32:04] -rw------- 1 boincer umatlas   6819840 Dec  1 06:32 result.tar.gz
06:32:06 (26226): run_atlas exited; CPU time 268803.052852
06:32:06 (26226): called boinc_finish(0)

</stderr_txt>
]]>

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