Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:29:21 (3752878): wrapper (7.7.26015): starting
17:29:21 (3752878): wrapper: running run_atlas (--nthreads 8)
[2025-11-30 17:29:21] Arguments: --nthreads 8
[2025-11-30 17:29:21] Threads: 8
[2025-11-30 17:29:21] Checking for CVMFS
[2025-11-30 17:29:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 17:29:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 17:29:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 17:29:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 17:29:21] 2.11.3.0 3725062 6 49076 153500 1 88 44882401 45568000 45 130560 0 67386 100.000 1 13 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-30 17:29:21] CVMFS is ok
[2025-11-30 17:29:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 17:29:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 17:29:21] Further information can be found at the LHC@home message board.
[2025-11-30 17:29:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 17:29:21] Checking for apptainer binary...
[2025-11-30 17:29:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 17:29:21] Running /usr/bin/apptainer --version
[2025-11-30 17:29:21] apptainer version 1.4.1-1.el9
[2025-11-30 17:29:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 17:29:21] wns0014.triumf.lcg
[2025-11-30 17:29:21] apptainer works
[2025-11-30 17:29:21] Set ATHENA_PROC_NUMBER=8
[2025-11-30 17:29:21] Set ATHENA_CORE_NUMBER=8
[2025-11-30 17:29:21] Starting ATLAS job with PandaID=6905025688
[2025-11-30 17:29:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 17:32:36]  *** The last 200 lines of the pilot log: ***
[2025-11-30 17:32:36] 2025-12-01 01:32:07,441 | WARNING  | found no stored workdir sizes
[2025-11-30 17:32:36] 2025-12-01 01:32:07,441 | INFO     | will not add max space = 0 B to job metrics
[2025-11-30 17:32:36] 2025-12-01 01:32:07,442 | WARNING  | wrong length of table data, x=[1764552592.0], y=[832.0] (must be same and length>=4)
[2025-11-30 17:32:36] 2025-12-01 01:32:07,442 | INFO     | could have reported an average CPU frequency of 2000 MHz (4 samples)
[2025-11-30 17:32:36] 2025-12-01 01:32:07,442 | INFO     | ..............................
[2025-11-30 17:32:36] 2025-12-01 01:32:07,442 | INFO     | . Timing measurements:
[2025-11-30 17:32:36] 2025-12-01 01:32:07,442 | INFO     | . get job = 0 s
[2025-11-30 17:32:36] 2025-12-01 01:32:07,442 | INFO     | . initial setup = 2 s
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | . payload setup = 4 s
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | . stage-in = 0 s
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | . payload execution = 14 s
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | . stage-out = 0 s
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | . log creation = 0 s
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | ..............................
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905025688/pilotlog.txt
[2025-11-30 17:32:36] 2025-12-01 01:32:07,453 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-30 17:32:36] - Log from pilotlog.txt -
[2025-11-30 17:32:36] 2025-12-01 01:32:07,441 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 17:32:36] 2025-12-01 01:32:07,441 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 17:32:36] 2025-12-01 01:32:07,441 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-30 17:32:36] 2025-12-01 01:32:07,441 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-30 17:32:36] 2025-12-01 01:32:07,441 | WARNING  | found no stored workdir sizes
[2025-11-30 17:32:36] 2025-12-01 01:32:07,441 | INFO     | will not add max space = 0 B to job metrics
[2025-11-30 17:32:36] 2025-12-01 01:32:07,442 | WARNING  | wrong length of table data, x=[1764552592.0], y=[832.0] (must be same and length>=4)
[2025-11-30 17:32:36] 2025-12-01 01:32:07,442 | INFO     | could have reported an average CPU frequency of 2000 MHz (4 samples)
[2025-11-30 17:32:36] 2025-12-01 01:32:07,442 | INFO     | ..............................
[2025-11-30 17:32:36] 2025-12-01 01:32:07,442 | INFO     | . Timing measurements:
[2025-11-30 17:32:36] 2025-12-01 01:32:07,442 | INFO     | . get job = 0 s
[2025-11-30 17:32:36] 2025-12-01 01:32:07,442 | INFO     | . initial setup = 2 s
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | . payload setup = 4 s
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | . stage-in = 0 s
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | . payload execution = 14 s
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | . stage-out = 0 s
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | . log creation = 0 s
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | ..............................
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905025688/pilotlog.txt
[2025-11-30 17:32:36] 2025-12-01 01:32:07,453 | WARNING  | 
[2025-11-30 17:32:36] [begin log extracts]
[2025-11-30 17:32:36] - Log from pilotlog.txt -
[2025-11-30 17:32:36] 2025-12-01 01:32:07,441 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 17:32:36] 2025-12-01 01:32:07,441 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 17:32:36] 2025-12-01 01:32:07,441 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-30 17:32:36] 2025-12-01 01:32:07,441 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-30 17:32:36] 2025-12-01 01:32:07,441 | WARNING  | found no stored workdir sizes
[2025-11-30 17:32:36] 2025-12-01 01:32:07,441 | INFO     | will not add max space = 0 B to job metrics
[2025-11-30 17:32:36] 2025-12-01 01:32:07,442 | WARNING  | wrong length of table data, x=[1764552592.0], y=[832.0] (must be same and length>=4)
[2025-11-30 17:32:36] 2025-12-01 01:32:07,442 | INFO     | could have reported an average CPU frequency of 2000 MHz (4 samples)
[2025-11-30 17:32:36] 2025-12-01 01:32:07,442 | INFO     | ..............................
[2025-11-30 17:32:36] 2025-12-01 01:32:07,442 | INFO     | . Timing measurements:
[2025-11-30 17:32:36] 2025-12-01 01:32:07,442 | INFO     | . get job = 0 s
[2025-11-30 17:32:36] 2025-12-01 01:32:07,442 | INFO     | . initial setup = 2 s
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | . payload setup = 4 s
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | . stage-in = 0 s
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | . payload execution = 14 s
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | . stage-out = 0 s
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | . log creation = 0 s
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | ..............................
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-30 17:32:36] 2025-12-01 01:32:07,443 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905025688/pilotlog.txt
[2025-11-30 17:32:36] [end log extracts]
[2025-11-30 17:32:36] 2025-12-01 01:32:07,453 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-11-30 17:32:36] 2025-12-01 01:32:07,454 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-30 17:32:36] 2025-12-01 01:32:07,686 | INFO     | time since job start (158s) is within the limit (172800.0s)
[2025-11-30 17:32:36] 2025-12-01 01:32:07,772 | INFO     | 
[2025-11-30 17:32:36] 2025-12-01 01:32:07,772 | INFO     | job summary report
[2025-11-30 17:32:36] 2025-12-01 01:32:07,772 | INFO     | --------------------------------------------------
[2025-11-30 17:32:36] 2025-12-01 01:32:07,772 | INFO     | PanDA job id: 6905025688
[2025-11-30 17:32:36] 2025-12-01 01:32:07,772 | INFO     | task id: 47523969
[2025-11-30 17:32:36] 2025-12-01 01:32:07,772 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-30 17:29:59,060 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-30 17:32:36] 2025-12-01 01:32:07,772 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 17:32:36] 2025-12-01 01:32:07,772 | INFO     | pilot state: failed 
[2025-11-30 17:32:36] 2025-12-01 01:32:07,772 | INFO     | transexitcode: 65
[2025-11-30 17:32:36] 2025-12-01 01:32:07,772 | INFO     | exeerrorcode: 65
[2025-11-30 17:32:36] 2025-12-01 01:32:07,773 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-11-30 17:32:36] 2025-12-01 01:32:07,773 | INFO     | exitcode: 65
[2025-11-30 17:32:36] 2025-12-01 01:32:07,773 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-11-30 17:32:36] 2025-12-01 01:32:07,773 | INFO     | cpuconsumptiontime: 16 s
[2025-11-30 17:32:36] 2025-12-01 01:32:07,773 | INFO     | nevents: 0
[2025-11-30 17:32:36] 2025-12-01 01:32:07,773 | INFO     | neventsw: 0
[2025-11-30 17:32:36] 2025-12-01 01:32:07,773 | INFO     | pid: 3764230
[2025-11-30 17:32:36] 2025-12-01 01:32:07,773 | INFO     | pgrp: 3764230
[2025-11-30 17:32:36] 2025-12-01 01:32:07,773 | INFO     | corecount: 8
[2025-11-30 17:32:36] 2025-12-01 01:32:07,773 | INFO     | event service: False
[2025-11-30 17:32:36] 2025-12-01 01:32:07,773 | INFO     | sizes: {0: 2283888, 3: 2284150, 11: 2284178, 21: 2307346, 22: 2311642, 24: 2311642, 143: 2311936}
[2025-11-30 17:32:36] 2025-12-01 01:32:07,773 | INFO     | --------------------------------------------------
[2025-11-30 17:32:36] 2025-12-01 01:32:07,773 | INFO     | 
[2025-11-30 17:32:36] 2025-12-01 01:32:07,773 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-30 17:32:36] 2025-12-01 01:32:07,786 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 17:32:36] 2025-12-01 01:32:07,786 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 17:32:36] 2025-12-01 01:32:07,786 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 17:32:36] 2025-12-01 01:32:07,786 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 17:32:36] 2025-12-01 01:32:07,786 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 17:32:36] 2025-12-01 01:32:07,787 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 17:32:36] 2025-12-01 01:32:07,787 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 17:32:36] 2025-12-01 01:32:07,787 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 17:32:36] 2025-12-01 01:32:07,787 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 17:32:36] 2025-12-01 01:32:07,787 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 17:32:36] 2025-12-01 01:32:07,787 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 17:32:36] 2025-12-01 01:32:07,787 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 17:32:36] 2025-12-01 01:32:07,787 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 17:32:36] 2025-12-01 01:32:07,787 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 17:32:36] 2025-12-01 01:32:07,787 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 17:32:36] 2025-12-01 01:32:07,787 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 17:32:36] 2025-12-01 01:32:07,787 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 17:32:36] 2025-12-01 01:32:07,787 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 17:32:36] 2025-12-01 01:32:07,788 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 17:32:36] 2025-12-01 01:32:07,788 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 17:32:36] 2025-12-01 01:32:07,788 | INFO     | job 6905025688 has completed (purged errors)
[2025-11-30 17:32:36] 2025-12-01 01:32:07,788 | INFO     | overall cleanup function is called
[2025-11-30 17:32:36] 2025-12-01 01:32:08,794 | INFO     | --- collectZombieJob: --- 10, [3764230]
[2025-11-30 17:32:36] 2025-12-01 01:32:08,794 | INFO     | zombie collector waiting for pid 3764230
[2025-11-30 17:32:36] 2025-12-01 01:32:08,794 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 17:32:36] 2025-12-01 01:32:08,794 | INFO     | collected zombie processes
[2025-11-30 17:32:36] 2025-12-01 01:32:08,794 | INFO     | will attempt to kill all subprocesses of pid=3764230
[2025-11-30 17:32:36] 2025-12-01 01:32:08,894 | INFO     | process IDs to be killed: [3764230] (in reverse order)
[2025-11-30 17:32:36] 2025-12-01 01:32:08,924 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 17:32:36] 2025-12-01 01:32:08,924 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 17:32:36] 2025-12-01 01:32:08,926 | INFO     | did not find any defunct processes belonging to 3764230
[2025-11-30 17:32:36] 2025-12-01 01:32:08,929 | INFO     | did not find any defunct processes belonging to 3764230
[2025-11-30 17:32:36] 2025-12-01 01:32:08,930 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 17:32:36] 2025-12-01 01:32:08,930 | INFO     | ready for new job
[2025-11-30 17:32:36] 2025-12-01 01:32:08,930 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 17:32:36] 2025-12-01 01:32:08,931 | INFO     | ***************************************
[2025-11-30 17:32:36] 2025-12-01 01:32:08,931 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 17:32:36] 2025-12-01 01:32:08,931 | INFO     | ***************************************
[2025-11-30 17:32:36] 2025-12-01 01:32:08,931 | INFO     | 
[2025-11-30 17:32:36] 2025-12-01 01:32:08,932 | INFO     | architecture information:
[2025-11-30 17:32:36] 2025-12-01 01:32:08,933 | INFO     | executing command: cat /etc/os-release
[2025-11-30 17:32:36] 2025-12-01 01:32:08,941 | INFO     | cat /etc/os-release:
[2025-11-30 17:32:36] NAME="CentOS Linux"
[2025-11-30 17:32:36] VERSION="7 (Core)"
[2025-11-30 17:32:36] ID="centos"
[2025-11-30 17:32:36] ID_LIKE="rhel fedora"
[2025-11-30 17:32:36] VERSION_ID="7"
[2025-11-30 17:32:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 17:32:36] ANSI_COLOR="0;31"
[2025-11-30 17:32:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 17:32:36] HOME_URL="https://www.centos.org/"
[2025-11-30 17:32:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 17:32:36] 
[2025-11-30 17:32:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 17:32:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 17:32:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 17:32:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 17:32:36] 
[2025-11-30 17:32:36] 2025-12-01 01:32:08,941 | INFO     | ***************************************
[2025-11-30 17:32:36] 2025-12-01 01:32:09,444 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-30 17:32:36] 2025-12-01 01:32:09,452 | INFO     | sufficient remaining disk space (1477907054592 B)
[2025-11-30 17:32:36] 2025-12-01 01:32:09,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 17:32:36] 2025-12-01 01:32:09,453 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 17:32:36] 2025-12-01 01:32:09,453 | INFO     | update_server=False
[2025-11-30 17:32:36] 2025-12-01 01:32:09,453 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 17:32:36] 2025-12-01 01:32:09,453 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 17:32:36] 2025-12-01 01:32:09,454 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-30 17:32:36] 2025-12-01 01:32:09,454 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 17:32:36] 2025-12-01 01:32:09,454 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 17:32:36] 2025-12-01 01:32:09,454 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 17:32:36] 2025-12-01 01:32:09,454 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 17:32:36] 2025-12-01 01:32:09,486 | INFO     | all data control threads have been joined
[2025-11-30 17:32:36] 2025-12-01 01:32:09,799 | INFO     | all job control threads have been joined
[2025-11-30 17:32:36] 2025-12-01 01:32:10,096 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 17:32:36] 2025-12-01 01:32:10,097 | INFO     | aborting loop
[2025-11-30 17:32:36] 2025-12-01 01:32:10,458 | INFO     | [job] retrieve thread has finished
[2025-11-30 17:32:36] 2025-12-01 01:32:10,459 | INFO     | [job] queue monitor thread has finished
[2025-11-30 17:32:36] 2025-12-01 01:32:10,464 | INFO     | all payload control threads have been joined
[2025-11-30 17:32:36] 2025-12-01 01:32:10,492 | INFO     | [data] control thread has finished
[2025-11-30 17:32:36] 2025-12-01 01:32:10,515 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 17:32:36] 2025-12-01 01:32:10,634 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 17:32:36] 2025-12-01 01:32:10,660 | INFO     | [payload] validate_post thread has finished
[2025-11-30 17:32:36] 2025-12-01 01:32:10,788 | INFO     | [data] copytool_in thread has finished
[2025-11-30 17:32:36] 2025-12-01 01:32:10,804 | INFO     | [job] control thread has finished
[2025-11-30 17:32:36] 2025-12-01 01:32:11,014 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 17:32:36] 2025-12-01 01:32:11,102 | INFO     | [job] job monitor thread has finished
[2025-11-30 17:32:36] 2025-12-01 01:32:11,207 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 17:32:36] 2025-12-01 01:32:11,381 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 17:32:36] 2025-12-01 01:32:11,460 | INFO     | [data] copytool_out thread has finished
[2025-11-30 17:32:36] 2025-12-01 01:32:11,469 | INFO     | [payload] control thread has finished
[2025-11-30 17:32:36] 2025-12-01 01:32:11,765 | INFO     | [payload] failed_post thread has finished
[2025-11-30 17:32:36] 2025-12-01 01:32:11,846 | INFO     | [job] validate thread has finished
[2025-11-30 17:32:36] 2025-12-01 01:32:15,020 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 17:32:36] 2025-12-01 01:32:29,555 | INFO     | [monitor] cgroup control has ended
[2025-11-30 17:32:36] 2025-12-01 01:32:31,320 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140189041510208)>', '<ExcThread(monitor, started 140188621707008)>']
[2025-11-30 17:32:36] 2025-12-01 01:32:31,565 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 17:32:36] 2025-12-01 01:32:31,565 | INFO     | [monitor] control thread has ended
[2025-11-30 17:32:36] 2025-12-01 01:32:36,346 | INFO     | all workflow threads have been joined
[2025-11-30 17:32:36] 2025-12-01 01:32:36,346 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 17:32:36] 2025-12-01 01:32:36,346 | INFO     | traces error code: 0
[2025-11-30 17:32:36] 2025-12-01 01:32:36,346 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 17:32:36] 2025-12-01 01:32:36,415 [wrapper] ==== pilot stdout END ====
[2025-11-30 17:32:36] 2025-12-01 01:32:36,417 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 17:32:36] 2025-12-01 01:32:36,419 [wrapper] pilotpid: 3756580
[2025-11-30 17:32:36] 2025-12-01 01:32:36,420 [wrapper] Pilot exit status: 0
[2025-11-30 17:32:36] 2025-12-01 01:32:36,427 [wrapper] pandaids: 6905025688
[2025-11-30 17:32:36] 2025-12-01 01:32:36,446 [wrapper] cleanup supervisor_pilot 3756586 3756581
[2025-11-30 17:32:36] 2025-12-01 01:32:36,448 [wrapper] Test setup, not cleaning
[2025-11-30 17:32:36] 2025-12-01 01:32:36,449 [wrapper] apfmon messages muted
[2025-11-30 17:32:36] 2025-12-01 01:32:36,451 [wrapper] ==== wrapper stdout END ====
[2025-11-30 17:32:36] 2025-12-01 01:32:36,453 [wrapper] ==== wrapper stderr END ====
[2025-11-30 17:32:36]  *** Error codes and diagnostics ***
[2025-11-30 17:32:36]     "exeErrorCode": 65,
[2025-11-30 17:32:36]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-11-30 17:32:36]     "pilotErrorCode": 1305,
[2025-11-30 17:32:36]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-11-30 17:32:36]  *** Listing of results directory ***
[2025-11-30 17:32:36] total 293812
[2025-11-30 17:32:36] -rw-r--r--. 1 boinc boinc    576529 Nov 29 16:16 pilot3.tar.gz
[2025-11-30 17:32:36] -rwx------. 1 boinc boinc     36292 Nov 29 16:19 runpilot2-wrapper.sh
[2025-11-30 17:32:36] -rw-r--r--. 1 boinc boinc      5112 Nov 29 16:24 queuedata.json
[2025-11-30 17:32:36] -rw-r--r--. 1 boinc boinc       100 Nov 30 17:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 17:32:36] -rwxr-xr-x. 1 boinc boinc      7986 Nov 30 17:29 run_atlas
[2025-11-30 17:32:36] -rw-r--r--. 1 boinc boinc       105 Nov 30 17:29 job.xml
[2025-11-30 17:32:36] -rw-r--r--. 1 boinc boinc      6447 Nov 30 17:29 init_data.xml
[2025-11-30 17:32:36] -rw-r--r--. 2 boinc boinc 296750262 Nov 30 17:29 EVNT.47523965._000007.pool.root.1
[2025-11-30 17:32:36] -rw-r--r--. 2 boinc boinc     15847 Nov 30 17:29 start_atlas.sh
[2025-11-30 17:32:36] drwxrwx--x. 2 boinc boinc      4096 Nov 30 17:29 shared
[2025-11-30 17:32:36] -rw-r--r--. 2 boinc boinc    589957 Nov 30 17:29 input.tar.gz
[2025-11-30 17:32:36] -rw-r--r--. 1 boinc boinc         0 Nov 30 17:29 boinc_lockfile
[2025-11-30 17:32:36] -rw-r--r--. 1 boinc boinc      2604 Nov 30 17:29 pandaJob.out
[2025-11-30 17:32:36] -rw-------. 1 boinc boinc    993253 Nov 30 17:29 agis_schedconf.cvmfs.json
[2025-11-30 17:32:36] -rw-------. 1 boinc boinc   1516240 Nov 30 17:29 agis_ddmendpoints.agis.ALL.json
[2025-11-30 17:32:36] drwx------. 5 boinc boinc      4096 Nov 30 17:29 pilot3
[2025-11-30 17:32:36] -rw-------. 1 boinc boinc       953 Nov 30 17:30 memory_monitor_summary.json
[2025-11-30 17:32:36] -rw-------. 1 boinc boinc     20427 Nov 30 17:30 log.47523969._000147.job.log.tgz.1
[2025-11-30 17:32:36] -rw-r--r--. 1 boinc boinc       522 Nov 30 17:30 boinc_task_state.xml
[2025-11-30 17:32:36] -rw-------. 1 boinc boinc        95 Nov 30 17:31 pilot_heartbeat.json
[2025-11-30 17:32:36] -rw-------. 1 boinc boinc      8351 Nov 30 17:32 heartbeat.json
[2025-11-30 17:32:36] -rw-r--r--. 1 boinc boinc      8192 Nov 30 17:32 boinc_mmap_file
[2025-11-30 17:32:36] -rw-r--r--. 1 boinc boinc        22 Nov 30 17:32 wrapper_checkpoint.txt
[2025-11-30 17:32:36] -rw-------. 1 boinc boinc      4551 Nov 30 17:32 pilotlog.txt
[2025-11-30 17:32:36] -rw-------. 1 boinc boinc     84319 Nov 30 17:32 log.47523969._000147.job.log.1
[2025-11-30 17:32:36] -rw-------. 1 boinc boinc       188 Nov 30 17:32 output.list
[2025-11-30 17:32:36] -rw-r--r--. 1 boinc boinc       620 Nov 30 17:32 runtime_log
[2025-11-30 17:32:36] -rw-------. 1 boinc boinc    122880 Nov 30 17:32 result.tar.gz
[2025-11-30 17:32:36] -rw-r--r--. 1 boinc boinc      8634 Nov 30 17:32 runtime_log.err
[2025-11-30 17:32:36] -rw-------. 1 boinc boinc       645 Nov 30 17:32 DwPLDmcLkj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEBMKDmi9ZCgm.diag
[2025-11-30 17:32:36] -rw-r--r--. 1 boinc boinc     21670 Nov 30 17:32 stderr.txt
[2025-11-30 17:32:36] No HITS result produced
[2025-11-30 17:32:36]  *** Contents of shared directory: ***
[2025-11-30 17:32:36] total 290512
[2025-11-30 17:32:36] -rw-r--r--. 2 boinc boinc 296750262 Nov 30 17:29 ATLAS.root_0
[2025-11-30 17:32:36] -rw-r--r--. 2 boinc boinc     15847 Nov 30 17:29 start_atlas.sh
[2025-11-30 17:32:36] -rw-r--r--. 2 boinc boinc    589957 Nov 30 17:29 input.tar.gz
[2025-11-30 17:32:36] -rw-------. 1 boinc boinc    122880 Nov 30 17:32 result.tar.gz
17:32:37 (3752878): run_atlas exited; CPU time 19.732644
17:32:37 (3752878): called boinc_finish(0)

</stderr_txt>
]]>

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