Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:23:24 (1817987): wrapper (7.7.26015): starting
17:23:24 (1817987): wrapper: running run_atlas (--nthreads 12)
[2025-11-30 17:23:24] Arguments: --nthreads 12
[2025-11-30 17:23:24] Threads: 12
[2025-11-30 17:23:24] Checking for CVMFS
[2025-11-30 17:23:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 17:23:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 17:23:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 17:23:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 17:23:25] 2.11.5.0 1653896 48 57440 153500 3 67 23718713 45568001 0 130560 0 516181 100.000 1368 1570 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-30 17:23:25] CVMFS is ok
[2025-11-30 17:23:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 17:23:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 17:23:25] Further information can be found at the LHC@home message board.
[2025-11-30 17:23:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 17:23:25] Checking for apptainer binary...
[2025-11-30 17:23:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 17:23:25] Running /usr/bin/apptainer --version
[2025-11-30 17:23:25] apptainer version 1.4.1-1.el9
[2025-11-30 17:23:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 17:23:25] wns0030.triumf.lcg
[2025-11-30 17:23:25] apptainer works
[2025-11-30 17:23:25] Set ATHENA_PROC_NUMBER=12
[2025-11-30 17:23:25] Set ATHENA_CORE_NUMBER=12
[2025-11-30 17:23:26] Starting ATLAS job with PandaID=6904565574
[2025-11-30 17:23:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 17:27:46]  *** The last 200 lines of the pilot log: ***
[2025-11-30 17:27:46] 2025-12-01 01:26:47,154 | WARNING  | found no stored workdir sizes
[2025-11-30 17:27:46] 2025-12-01 01:26:47,154 | INFO     | will not add max space = 0 B to job metrics
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | WARNING  | wrong length of table data, x=[1764552256.0], y=[2010.0] (must be same and length>=4)
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | could have reported an average CPU frequency of 1832 MHz (4 samples)
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | ..............................
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . Timing measurements:
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . get job = 0 s
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . initial setup = 2 s
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . payload setup = 10 s
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . stage-in = 0 s
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . payload execution = 28 s
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . stage-out = 0 s
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . log creation = 0 s
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | ..............................
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-30 17:27:46] 2025-12-01 01:26:47,156 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6904565574/pilotlog.txt
[2025-11-30 17:27:46] 2025-12-01 01:26:47,171 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-30 17:27:46] - Log from pilotlog.txt -
[2025-11-30 17:27:46] 2025-12-01 01:26:47,153 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 17:27:46] 2025-12-01 01:26:47,153 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 17:27:46] 2025-12-01 01:26:47,154 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-30 17:27:46] 2025-12-01 01:26:47,154 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-30 17:27:46] 2025-12-01 01:26:47,154 | WARNING  | found no stored workdir sizes
[2025-11-30 17:27:46] 2025-12-01 01:26:47,154 | INFO     | will not add max space = 0 B to job metrics
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | WARNING  | wrong length of table data, x=[1764552256.0], y=[2010.0] (must be same and length>=4)
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | could have reported an average CPU frequency of 1832 MHz (4 samples)
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | ..............................
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . Timing measurements:
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . get job = 0 s
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . initial setup = 2 s
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . payload setup = 10 s
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . stage-in = 0 s
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . payload execution = 28 s
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . stage-out = 0 s
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . log creation = 0 s
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | ..............................
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-30 17:27:46] 2025-12-01 01:26:47,156 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6904565574/pilotlog.txt
[2025-11-30 17:27:46] 2025-12-01 01:26:47,172 | WARNING  | 
[2025-11-30 17:27:46] [begin log extracts]
[2025-11-30 17:27:46] - Log from pilotlog.txt -
[2025-11-30 17:27:46] 2025-12-01 01:26:47,153 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 17:27:46] 2025-12-01 01:26:47,153 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 17:27:46] 2025-12-01 01:26:47,154 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-30 17:27:46] 2025-12-01 01:26:47,154 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-30 17:27:46] 2025-12-01 01:26:47,154 | WARNING  | found no stored workdir sizes
[2025-11-30 17:27:46] 2025-12-01 01:26:47,154 | INFO     | will not add max space = 0 B to job metrics
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | WARNING  | wrong length of table data, x=[1764552256.0], y=[2010.0] (must be same and length>=4)
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | could have reported an average CPU frequency of 1832 MHz (4 samples)
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | ..............................
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . Timing measurements:
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . get job = 0 s
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . initial setup = 2 s
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . payload setup = 10 s
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . stage-in = 0 s
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . payload execution = 28 s
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . stage-out = 0 s
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | . log creation = 0 s
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | ..............................
[2025-11-30 17:27:46] 2025-12-01 01:26:47,155 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-30 17:27:46] 2025-12-01 01:26:47,156 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6904565574/pilotlog.txt
[2025-11-30 17:27:46] [end log extracts]
[2025-11-30 17:27:46] 2025-12-01 01:26:47,172 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-11-30 17:27:46] 2025-12-01 01:26:47,173 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-30 17:27:46] 2025-12-01 01:26:47,448 | INFO     | time since job start (186s) is within the limit (172800.0s)
[2025-11-30 17:27:46] 2025-12-01 01:26:47,641 | INFO     | 
[2025-11-30 17:27:46] 2025-12-01 01:26:47,641 | INFO     | job summary report
[2025-11-30 17:27:46] 2025-12-01 01:26:47,641 | INFO     | --------------------------------------------------
[2025-11-30 17:27:46] 2025-12-01 01:26:47,641 | INFO     | PanDA job id: 6904565574
[2025-11-30 17:27:46] 2025-12-01 01:26:47,641 | INFO     | task id: 47523908
[2025-11-30 17:27:46] 2025-12-01 01:26:47,641 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-30 17:24:33,671 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-30 17:27:46] 2025-12-01 01:26:47,642 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 17:27:46] 2025-12-01 01:26:47,642 | INFO     | pilot state: failed 
[2025-11-30 17:27:46] 2025-12-01 01:26:47,642 | INFO     | transexitcode: 65
[2025-11-30 17:27:46] 2025-12-01 01:26:47,642 | INFO     | exeerrorcode: 65
[2025-11-30 17:27:46] 2025-12-01 01:26:47,642 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-11-30 17:27:46] 2025-12-01 01:26:47,642 | INFO     | exitcode: 65
[2025-11-30 17:27:46] 2025-12-01 01:26:47,642 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-11-30 17:27:46] 2025-12-01 01:26:47,642 | INFO     | cpuconsumptiontime: 31 s
[2025-11-30 17:27:46] 2025-12-01 01:26:47,643 | INFO     | nevents: 0
[2025-11-30 17:27:46] 2025-12-01 01:26:47,643 | INFO     | neventsw: 0
[2025-11-30 17:27:46] 2025-12-01 01:26:47,643 | INFO     | pid: 1828258
[2025-11-30 17:27:46] 2025-12-01 01:26:47,643 | INFO     | pgrp: 1828258
[2025-11-30 17:27:46] 2025-12-01 01:26:47,643 | INFO     | corecount: 12
[2025-11-30 17:27:46] 2025-12-01 01:26:47,643 | INFO     | event service: False
[2025-11-30 17:27:46] 2025-12-01 01:26:47,643 | INFO     | sizes: {0: 2283676, 1: 2283931, 8: 2284193, 11: 2284221, 42: 2307401, 43: 2311849, 167: 2311987}
[2025-11-30 17:27:46] 2025-12-01 01:26:47,643 | INFO     | --------------------------------------------------
[2025-11-30 17:27:46] 2025-12-01 01:26:47,643 | INFO     | 
[2025-11-30 17:27:46] 2025-12-01 01:26:47,644 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-30 17:27:46] 2025-12-01 01:26:47,669 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 17:27:46] 2025-12-01 01:26:47,670 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 17:27:46] 2025-12-01 01:26:47,670 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 17:27:46] 2025-12-01 01:26:47,670 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 17:27:46] 2025-12-01 01:26:47,670 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 17:27:46] 2025-12-01 01:26:47,671 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 17:27:46] 2025-12-01 01:26:47,671 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 17:27:46] 2025-12-01 01:26:47,671 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 17:27:46] 2025-12-01 01:26:47,671 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 17:27:46] 2025-12-01 01:26:47,671 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 17:27:46] 2025-12-01 01:26:47,671 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 17:27:46] 2025-12-01 01:26:47,671 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 17:27:46] 2025-12-01 01:26:47,672 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 17:27:46] 2025-12-01 01:26:47,672 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 17:27:46] 2025-12-01 01:26:47,672 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 17:27:46] 2025-12-01 01:26:47,672 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 17:27:46] 2025-12-01 01:26:47,672 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 17:27:46] 2025-12-01 01:26:47,672 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 17:27:46] 2025-12-01 01:26:47,672 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 17:27:46] 2025-12-01 01:26:47,672 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 17:27:46] 2025-12-01 01:26:47,673 | INFO     | job 6904565574 has completed (purged errors)
[2025-11-30 17:27:46] 2025-12-01 01:26:47,673 | INFO     | overall cleanup function is called
[2025-11-30 17:27:46] 2025-12-01 01:26:48,680 | INFO     | --- collectZombieJob: --- 10, [1828258]
[2025-11-30 17:27:46] 2025-12-01 01:26:48,680 | INFO     | zombie collector waiting for pid 1828258
[2025-11-30 17:27:46] 2025-12-01 01:26:48,681 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 17:27:46] 2025-12-01 01:26:48,681 | INFO     | collected zombie processes
[2025-11-30 17:27:46] 2025-12-01 01:26:48,681 | INFO     | will attempt to kill all subprocesses of pid=1828258
[2025-11-30 17:27:46] 2025-12-01 01:26:48,799 | INFO     | process IDs to be killed: [1828258] (in reverse order)
[2025-11-30 17:27:46] 2025-12-01 01:26:48,851 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 17:27:46] 2025-12-01 01:26:48,852 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 17:27:46] 2025-12-01 01:26:48,859 | INFO     | did not find any defunct processes belonging to 1828258
[2025-11-30 17:27:46] 2025-12-01 01:26:48,863 | INFO     | did not find any defunct processes belonging to 1828258
[2025-11-30 17:27:46] 2025-12-01 01:26:48,863 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 17:27:46] 2025-12-01 01:26:48,864 | INFO     | ready for new job
[2025-11-30 17:27:46] 2025-12-01 01:26:48,864 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 17:27:46] 2025-12-01 01:26:48,865 | INFO     | ***************************************
[2025-11-30 17:27:46] 2025-12-01 01:26:48,865 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 17:27:46] 2025-12-01 01:26:48,865 | INFO     | ***************************************
[2025-11-30 17:27:46] 2025-12-01 01:26:48,865 | INFO     | 
[2025-11-30 17:27:46] 2025-12-01 01:26:48,867 | INFO     | architecture information:
[2025-11-30 17:27:46] 2025-12-01 01:26:48,868 | INFO     | executing command: cat /etc/os-release
[2025-11-30 17:27:46] 2025-12-01 01:26:48,883 | INFO     | cat /etc/os-release:
[2025-11-30 17:27:46] NAME="CentOS Linux"
[2025-11-30 17:27:46] VERSION="7 (Core)"
[2025-11-30 17:27:46] ID="centos"
[2025-11-30 17:27:46] ID_LIKE="rhel fedora"
[2025-11-30 17:27:46] VERSION_ID="7"
[2025-11-30 17:27:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 17:27:46] ANSI_COLOR="0;31"
[2025-11-30 17:27:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 17:27:46] HOME_URL="https://www.centos.org/"
[2025-11-30 17:27:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 17:27:46] 
[2025-11-30 17:27:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 17:27:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 17:27:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 17:27:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 17:27:46] 
[2025-11-30 17:27:46] 2025-12-01 01:26:48,883 | INFO     | ***************************************
[2025-11-30 17:27:46] 2025-12-01 01:26:49,386 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-30 17:27:46] 2025-12-01 01:26:49,408 | INFO     | sufficient remaining disk space (2243181936640 B)
[2025-11-30 17:27:46] 2025-12-01 01:26:49,409 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 17:27:46] 2025-12-01 01:26:49,409 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 17:27:46] 2025-12-01 01:26:49,409 | INFO     | update_server=False
[2025-11-30 17:27:46] 2025-12-01 01:26:49,409 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 17:27:46] 2025-12-01 01:26:49,410 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 17:27:46] 2025-12-01 01:26:49,410 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-30 17:27:46] 2025-12-01 01:26:49,411 | INFO     | aborting loop
[2025-11-30 17:27:46] 2025-12-01 01:26:49,411 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 17:27:46] 2025-12-01 01:26:49,412 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 17:27:46] 2025-12-01 01:26:49,412 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 17:27:46] 2025-12-01 01:26:49,585 | INFO     | all data control threads have been joined
[2025-11-30 17:27:46] 2025-12-01 01:26:50,135 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 17:27:46] 2025-12-01 01:26:50,241 | INFO     | all job control threads have been joined
[2025-11-30 17:27:46] 2025-12-01 01:26:50,415 | INFO     | [job] retrieve thread has finished
[2025-11-30 17:27:46] 2025-12-01 01:26:50,417 | INFO     | [job] job monitor thread has finished
[2025-11-30 17:27:46] 2025-12-01 01:26:50,501 | INFO     | all payload control threads have been joined
[2025-11-30 17:27:46] 2025-12-01 01:26:50,547 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 17:27:46] 2025-12-01 01:26:50,574 | INFO     | [data] copytool_in thread has finished
[2025-11-30 17:27:46] 2025-12-01 01:26:50,591 | INFO     | [data] control thread has finished
[2025-11-30 17:27:46] 2025-12-01 01:26:50,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 17:27:46] 2025-12-01 01:26:50,826 | INFO     | [payload] validate_post thread has finished
[2025-11-30 17:27:46] 2025-12-01 01:26:51,247 | INFO     | [job] control thread has finished
[2025-11-30 17:27:46] 2025-12-01 01:26:51,411 | INFO     | [payload] failed_post thread has finished
[2025-11-30 17:27:46] 2025-12-01 01:26:51,507 | INFO     | [payload] control thread has finished
[2025-11-30 17:27:46] 2025-12-01 01:26:51,668 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 17:27:46] 2025-12-01 01:26:51,721 | INFO     | [job] validate thread has finished
[2025-11-30 17:27:46] 2025-12-01 01:26:51,876 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 17:27:46] 2025-12-01 01:26:51,912 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 17:27:46] 2025-12-01 01:26:52,251 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 17:27:46] 2025-12-01 01:26:52,635 | INFO     | [data] copytool_out thread has finished
[2025-11-30 17:27:46] 2025-12-01 01:26:53,257 | INFO     | [job] queue monitor thread has finished
[2025-11-30 17:27:46] 2025-12-01 01:26:54,141 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 17:27:46] 2025-12-01 01:27:41,007 | INFO     | [monitor] cgroup control has ended
[2025-11-30 17:27:46] 2025-12-01 01:27:41,349 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140377015981888)>', '<ExcThread(monitor, started 140376467810048)>']
[2025-11-30 17:27:46] 2025-12-01 01:27:41,678 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 17:27:46] 2025-12-01 01:27:41,678 | INFO     | [monitor] control thread has ended
[2025-11-30 17:27:46] 2025-12-01 01:27:46,375 | INFO     | all workflow threads have been joined
[2025-11-30 17:27:46] 2025-12-01 01:27:46,375 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 17:27:46] 2025-12-01 01:27:46,376 | INFO     | traces error code: 0
[2025-11-30 17:27:46] 2025-12-01 01:27:46,376 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 17:27:46] 2025-12-01 01:27:46,469 [wrapper] ==== pilot stdout END ====
[2025-11-30 17:27:46] 2025-12-01 01:27:46,474 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 17:27:46] 2025-12-01 01:27:46,478 [wrapper] pilotpid: 1821685
[2025-11-30 17:27:46] 2025-12-01 01:27:46,483 [wrapper] Pilot exit status: 0
[2025-11-30 17:27:46] 2025-12-01 01:27:46,499 [wrapper] pandaids: 6904565574
[2025-11-30 17:27:46] 2025-12-01 01:27:46,557 [wrapper] cleanup supervisor_pilot 1821691 1821686
[2025-11-30 17:27:46] 2025-12-01 01:27:46,561 [wrapper] Test setup, not cleaning
[2025-11-30 17:27:46] 2025-12-01 01:27:46,566 [wrapper] apfmon messages muted
[2025-11-30 17:27:46] 2025-12-01 01:27:46,571 [wrapper] ==== wrapper stdout END ====
[2025-11-30 17:27:46] 2025-12-01 01:27:46,575 [wrapper] ==== wrapper stderr END ====
[2025-11-30 17:27:46]  *** Error codes and diagnostics ***
[2025-11-30 17:27:46]     "exeErrorCode": 65,
[2025-11-30 17:27:46]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-11-30 17:27:46]     "pilotErrorCode": 1305,
[2025-11-30 17:27:46]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-11-30 17:27:46]  *** Listing of results directory ***
[2025-11-30 17:27:46] total 300664
[2025-11-30 17:27:46] -rw-r--r--. 1 boinc boinc    576529 Nov 29 16:16 pilot3.tar.gz
[2025-11-30 17:27:46] -rwx------. 1 boinc boinc     36292 Nov 29 16:19 runpilot2-wrapper.sh
[2025-11-30 17:27:46] -rw-r--r--. 1 boinc boinc      5112 Nov 29 16:24 queuedata.json
[2025-11-30 17:27:46] -rw-r--r--. 1 boinc boinc       100 Nov 30 17:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 17:27:46] -rwxr-xr-x. 1 boinc boinc      7986 Nov 30 17:23 run_atlas
[2025-11-30 17:27:46] -rw-r--r--. 1 boinc boinc       105 Nov 30 17:23 job.xml
[2025-11-30 17:27:46] -rw-r--r--. 1 boinc boinc      6592 Nov 30 17:23 init_data.xml
[2025-11-30 17:27:46] -rw-r--r--. 2 boinc boinc 303751413 Nov 30 17:23 EVNT.47523904._000004.pool.root.1
[2025-11-30 17:27:46] -rw-r--r--. 2 boinc boinc     15847 Nov 30 17:23 start_atlas.sh
[2025-11-30 17:27:46] drwxrwx--x. 2 boinc boinc      4096 Nov 30 17:23 shared
[2025-11-30 17:27:46] -rw-r--r--. 2 boinc boinc    589966 Nov 30 17:23 input.tar.gz
[2025-11-30 17:27:46] -rw-r--r--. 1 boinc boinc         0 Nov 30 17:23 boinc_lockfile
[2025-11-30 17:27:46] -rw-r--r--. 1 boinc boinc      2619 Nov 30 17:23 pandaJob.out
[2025-11-30 17:27:46] -rw-------. 1 boinc boinc    993253 Nov 30 17:23 agis_schedconf.cvmfs.json
[2025-11-30 17:27:46] -rw-------. 1 boinc boinc   1516240 Nov 30 17:23 agis_ddmendpoints.agis.ALL.json
[2025-11-30 17:27:46] drwx------. 5 boinc boinc      4096 Nov 30 17:23 pilot3
[2025-11-30 17:27:46] -rw-r--r--. 1 boinc boinc       522 Nov 30 17:24 boinc_task_state.xml
[2025-11-30 17:27:46] -rw-------. 1 boinc boinc       954 Nov 30 17:24 memory_monitor_summary.json
[2025-11-30 17:27:46] -rw-------. 1 boinc boinc     21366 Nov 30 17:24 log.47523908._000212.job.log.tgz.1
[2025-11-30 17:27:46] -rw-------. 1 boinc boinc        95 Nov 30 17:26 pilot_heartbeat.json
[2025-11-30 17:27:46] -rw-------. 1 boinc boinc      8373 Nov 30 17:26 heartbeat.json
[2025-11-30 17:27:46] -rw-r--r--. 1 boinc boinc      8192 Nov 30 17:27 boinc_mmap_file
[2025-11-30 17:27:46] -rw-r--r--. 1 boinc boinc        22 Nov 30 17:27 wrapper_checkpoint.txt
[2025-11-30 17:27:46] -rw-------. 1 boinc boinc      4551 Nov 30 17:27 pilotlog.txt
[2025-11-30 17:27:46] -rw-------. 1 boinc boinc     87033 Nov 30 17:27 log.47523908._000212.job.log.1
[2025-11-30 17:27:46] -rw-------. 1 boinc boinc       188 Nov 30 17:27 output.list
[2025-11-30 17:27:46] -rw-r--r--. 1 boinc boinc       620 Nov 30 17:27 runtime_log
[2025-11-30 17:27:46] -rw-------. 1 boinc boinc    122880 Nov 30 17:27 result.tar.gz
[2025-11-30 17:27:46] -rw-r--r--. 1 boinc boinc      8636 Nov 30 17:27 runtime_log.err
[2025-11-30 17:27:46] -rw-------. 1 boinc boinc       645 Nov 30 17:27 3iINDmbLkj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZAMKDmvPUOTm.diag
[2025-11-30 17:27:46] -rw-r--r--. 1 boinc boinc     21688 Nov 30 17:27 stderr.txt
[2025-11-30 17:27:46] No HITS result produced
[2025-11-30 17:27:46]  *** Contents of shared directory: ***
[2025-11-30 17:27:46] total 297356
[2025-11-30 17:27:46] -rw-r--r--. 2 boinc boinc 303751413 Nov 30 17:23 ATLAS.root_0
[2025-11-30 17:27:46] -rw-r--r--. 2 boinc boinc     15847 Nov 30 17:23 start_atlas.sh
[2025-11-30 17:27:46] -rw-r--r--. 2 boinc boinc    589966 Nov 30 17:23 input.tar.gz
[2025-11-30 17:27:46] -rw-------. 1 boinc boinc    122880 Nov 30 17:27 result.tar.gz
17:27:48 (1817987): run_atlas exited; CPU time 30.751551
17:27:48 (1817987): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN