Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:07:50 (302394): wrapper (7.7.26015): starting
17:07:50 (302394): wrapper: running run_atlas (--nthreads 12)
[2025-11-30 17:07:50] Arguments: --nthreads 12
[2025-11-30 17:07:50] Threads: 12
[2025-11-30 17:07:50] Checking for CVMFS
[2025-11-30 17:07:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 17:07:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 17:07:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 17:07:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 17:07:50] 2.11.5.0 3640518 179 61648 153499 1 237 42735122 45568001 0 130560 0 2729793 99.993 73140 4009 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-30 17:07:50] CVMFS is ok
[2025-11-30 17:07:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 17:07:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 17:07:51] Further information can be found at the LHC@home message board.
[2025-11-30 17:07:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 17:07:51] Checking for apptainer binary...
[2025-11-30 17:07:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 17:07:51] Running /usr/bin/apptainer --version
[2025-11-30 17:07:51] apptainer version 1.4.1-1.el9
[2025-11-30 17:07:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 17:07:51] wns0084.triumf.lcg
[2025-11-30 17:07:51] apptainer works
[2025-11-30 17:07:51] Set ATHENA_PROC_NUMBER=12
[2025-11-30 17:07:51] Set ATHENA_CORE_NUMBER=12
[2025-11-30 17:07:51] Starting ATLAS job with PandaID=6905292715
[2025-11-30 17:07:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 17:12:05]  *** The last 200 lines of the pilot log: ***
[2025-11-30 17:12:05] 2025-12-01 01:11:19,783 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-30 17:12:05] 2025-12-01 01:11:19,783 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-30 17:12:05] 2025-12-01 01:11:19,784 | WARNING  | wrong length of table data, x=[1764551302.0], y=[2050.0] (must be same and length>=4)
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | could have reported an average CPU frequency of 3228 MHz (4 samples)
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | ..............................
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . Timing measurements:
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . get job = 0 s
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . initial setup = 2 s
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . payload setup = 6 s
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . stage-in = 0 s
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . payload execution = 57 s
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . stage-out = 0 s
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . log creation = 0 s
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | ..............................
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905292715/pilotlog.txt
[2025-11-30 17:12:05] 2025-12-01 01:11:19,794 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-30 17:12:05] - Log from pilotlog.txt -
[2025-11-30 17:12:05] 2025-12-01 01:11:19,781 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6905292715/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 17:12:05] 2025-12-01 01:11:19,782 | INFO     | extracted standard info from prmon json
[2025-11-30 17:12:05] 2025-12-01 01:11:19,782 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 17:12:05] 2025-12-01 01:11:19,782 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 17:12:05] 2025-12-01 01:11:19,783 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-30 17:12:05] 2025-12-01 01:11:19,783 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-30 17:12:05] 2025-12-01 01:11:19,784 | WARNING  | wrong length of table data, x=[1764551302.0], y=[2050.0] (must be same and length>=4)
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | could have reported an average CPU frequency of 3228 MHz (4 samples)
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | ..............................
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . Timing measurements:
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . get job = 0 s
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . initial setup = 2 s
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . payload setup = 6 s
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . stage-in = 0 s
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . payload execution = 57 s
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . stage-out = 0 s
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . log creation = 0 s
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | ..............................
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905292715/pilotlog.txt
[2025-11-30 17:12:05] 2025-12-01 01:11:19,794 | WARNING  | 
[2025-11-30 17:12:05] [begin log extracts]
[2025-11-30 17:12:05] - Log from pilotlog.txt -
[2025-11-30 17:12:05] 2025-12-01 01:11:19,781 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6905292715/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 17:12:05] 2025-12-01 01:11:19,782 | INFO     | extracted standard info from prmon json
[2025-11-30 17:12:05] 2025-12-01 01:11:19,782 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 17:12:05] 2025-12-01 01:11:19,782 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 17:12:05] 2025-12-01 01:11:19,783 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-30 17:12:05] 2025-12-01 01:11:19,783 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-30 17:12:05] 2025-12-01 01:11:19,784 | WARNING  | wrong length of table data, x=[1764551302.0], y=[2050.0] (must be same and length>=4)
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | could have reported an average CPU frequency of 3228 MHz (4 samples)
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | ..............................
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . Timing measurements:
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . get job = 0 s
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . initial setup = 2 s
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . payload setup = 6 s
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . stage-in = 0 s
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . payload execution = 57 s
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . stage-out = 0 s
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | . log creation = 0 s
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | ..............................
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-30 17:12:05] 2025-12-01 01:11:19,785 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905292715/pilotlog.txt
[2025-11-30 17:12:05] [end log extracts]
[2025-11-30 17:12:05] 2025-12-01 01:11:19,795 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-30 17:12:05] 2025-12-01 01:11:19,795 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-30 17:12:05] 2025-12-01 01:11:20,023 | INFO     | 
[2025-11-30 17:12:05] 2025-12-01 01:11:20,023 | INFO     | job summary report
[2025-11-30 17:12:05] 2025-12-01 01:11:20,023 | INFO     | --------------------------------------------------
[2025-11-30 17:12:05] 2025-12-01 01:11:20,023 | INFO     | PanDA job id: 6905292715
[2025-11-30 17:12:05] 2025-12-01 01:11:20,023 | INFO     | task id: 47538113
[2025-11-30 17:12:05] 2025-12-01 01:11:20,023 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-30 17:09:12,347 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-30 17:12:05] 2025-12-01 01:11:20,023 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-30 17:12:05] 2025-12-01 01:11:20,023 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 17:12:05] 2025-12-01 01:11:20,023 | INFO     | pilot state: failed 
[2025-11-30 17:12:05] 2025-12-01 01:11:20,023 | INFO     | transexitcode: 65
[2025-11-30 17:12:05] 2025-12-01 01:11:20,023 | INFO     | exeerrorcode: 65
[2025-11-30 17:12:05] 2025-12-01 01:11:20,023 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-30 17:12:05] 2025-12-01 01:11:20,023 | INFO     | exitcode: 65
[2025-11-30 17:12:05] 2025-12-01 01:11:20,023 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-30 17:12:05] 2025-12-01 01:11:20,023 | INFO     | cpuconsumptiontime: 52 s
[2025-11-30 17:12:05] 2025-12-01 01:11:20,023 | INFO     | nevents: 0
[2025-11-30 17:12:05] 2025-12-01 01:11:20,023 | INFO     | neventsw: 0
[2025-11-30 17:12:05] 2025-12-01 01:11:20,024 | INFO     | pid: 313293
[2025-11-30 17:12:05] 2025-12-01 01:11:20,024 | INFO     | pgrp: 313293
[2025-11-30 17:12:05] 2025-12-01 01:11:20,024 | INFO     | corecount: 12
[2025-11-30 17:12:05] 2025-12-01 01:11:20,024 | INFO     | event service: False
[2025-11-30 17:12:05] 2025-12-01 01:11:20,024 | INFO     | sizes: {0: 2284401, 3: 2284663, 10: 2284691, 67: 2308296, 68: 2312586, 70: 2312674, 188: 2312968}
[2025-11-30 17:12:05] 2025-12-01 01:11:20,024 | INFO     | --------------------------------------------------
[2025-11-30 17:12:05] 2025-12-01 01:11:20,024 | INFO     | 
[2025-11-30 17:12:05] 2025-12-01 01:11:20,024 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-30 17:12:05] 2025-12-01 01:11:20,035 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 17:12:05] 2025-12-01 01:11:20,035 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 17:12:05] 2025-12-01 01:11:20,035 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 17:12:05] 2025-12-01 01:11:20,035 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 17:12:05] 2025-12-01 01:11:20,035 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 17:12:05] 2025-12-01 01:11:20,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 17:12:05] 2025-12-01 01:11:20,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 17:12:05] 2025-12-01 01:11:20,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 17:12:05] 2025-12-01 01:11:20,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 17:12:05] 2025-12-01 01:11:20,036 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 17:12:05] 2025-12-01 01:11:20,036 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 17:12:05] 2025-12-01 01:11:20,036 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 17:12:05] 2025-12-01 01:11:20,036 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 17:12:05] 2025-12-01 01:11:20,036 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 17:12:05] 2025-12-01 01:11:20,036 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 17:12:05] 2025-12-01 01:11:20,036 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 17:12:05] 2025-12-01 01:11:20,036 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 17:12:05] 2025-12-01 01:11:20,036 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 17:12:05] 2025-12-01 01:11:20,036 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 17:12:05] 2025-12-01 01:11:20,036 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 17:12:05] 2025-12-01 01:11:20,036 | INFO     | job 6905292715 has completed (purged errors)
[2025-11-30 17:12:05] 2025-12-01 01:11:20,036 | INFO     | overall cleanup function is called
[2025-11-30 17:12:05] 2025-12-01 01:11:21,044 | INFO     | --- collectZombieJob: --- 10, [313293]
[2025-11-30 17:12:05] 2025-12-01 01:11:21,044 | INFO     | zombie collector waiting for pid 313293
[2025-11-30 17:12:05] 2025-12-01 01:11:21,044 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 17:12:05] 2025-12-01 01:11:21,044 | INFO     | collected zombie processes
[2025-11-30 17:12:05] 2025-12-01 01:11:21,044 | INFO     | will attempt to kill all subprocesses of pid=313293
[2025-11-30 17:12:05] 2025-12-01 01:11:21,131 | INFO     | process IDs to be killed: [313293] (in reverse order)
[2025-11-30 17:12:05] 2025-12-01 01:11:21,162 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 17:12:05] 2025-12-01 01:11:21,162 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 17:12:05] 2025-12-01 01:11:21,165 | INFO     | did not find any defunct processes belonging to 313293
[2025-11-30 17:12:05] 2025-12-01 01:11:21,167 | INFO     | did not find any defunct processes belonging to 313293
[2025-11-30 17:12:05] 2025-12-01 01:11:21,168 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 17:12:05] 2025-12-01 01:11:21,168 | INFO     | ready for new job
[2025-11-30 17:12:05] 2025-12-01 01:11:21,168 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 17:12:05] 2025-12-01 01:11:21,170 | INFO     | ***************************************
[2025-11-30 17:12:05] 2025-12-01 01:11:21,170 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 17:12:05] 2025-12-01 01:11:21,170 | INFO     | ***************************************
[2025-11-30 17:12:05] 2025-12-01 01:11:21,170 | INFO     | 
[2025-11-30 17:12:05] 2025-12-01 01:11:21,172 | INFO     | architecture information:
[2025-11-30 17:12:05] 2025-12-01 01:11:21,172 | INFO     | executing command: cat /etc/os-release
[2025-11-30 17:12:05] 2025-12-01 01:11:21,178 | INFO     | cat /etc/os-release:
[2025-11-30 17:12:05] NAME="CentOS Linux"
[2025-11-30 17:12:05] VERSION="7 (Core)"
[2025-11-30 17:12:05] ID="centos"
[2025-11-30 17:12:05] ID_LIKE="rhel fedora"
[2025-11-30 17:12:05] VERSION_ID="7"
[2025-11-30 17:12:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 17:12:05] ANSI_COLOR="0;31"
[2025-11-30 17:12:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 17:12:05] HOME_URL="https://www.centos.org/"
[2025-11-30 17:12:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 17:12:05] 
[2025-11-30 17:12:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 17:12:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 17:12:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 17:12:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 17:12:05] 
[2025-11-30 17:12:05] 2025-12-01 01:11:21,178 | INFO     | ***************************************
[2025-11-30 17:12:05] 2025-12-01 01:11:21,681 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-30 17:12:05] 2025-12-01 01:11:21,689 | INFO     | sufficient remaining disk space (2242275966976 B)
[2025-11-30 17:12:05] 2025-12-01 01:11:21,689 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 17:12:05] 2025-12-01 01:11:21,689 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 17:12:05] 2025-12-01 01:11:21,689 | INFO     | update_server=False
[2025-11-30 17:12:05] 2025-12-01 01:11:21,689 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 17:12:05] 2025-12-01 01:11:21,689 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 17:12:05] 2025-12-01 01:11:22,359 | INFO     | all data control threads have been joined
[2025-11-30 17:12:05] 2025-12-01 01:11:22,661 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 17:12:05] 2025-12-01 01:11:22,661 | INFO     | aborting loop
[2025-11-30 17:12:05] 2025-12-01 01:11:22,695 | INFO     | [job] retrieve thread has finished
[2025-11-30 17:12:05] 2025-12-01 01:11:22,695 | INFO     | [job] queue monitor thread has finished
[2025-11-30 17:12:05] 2025-12-01 01:11:22,765 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 17:12:05] 2025-12-01 01:11:22,825 | INFO     | all payload control threads have been joined
[2025-11-30 17:12:05] 2025-12-01 01:11:22,860 | INFO     | all job control threads have been joined
[2025-11-30 17:12:05] 2025-12-01 01:11:22,939 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 17:12:05] 2025-12-01 01:11:23,120 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 17:12:05] 2025-12-01 01:11:23,364 | INFO     | [data] control thread has finished
[2025-11-30 17:12:05] 2025-12-01 01:11:23,394 | INFO     | [payload] failed_post thread has finished
[2025-11-30 17:12:05] 2025-12-01 01:11:23,501 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 17:12:05] 2025-12-01 01:11:23,667 | INFO     | [job] job monitor thread has finished
[2025-11-30 17:12:05] 2025-12-01 01:11:23,831 | INFO     | [payload] control thread has finished
[2025-11-30 17:12:05] 2025-12-01 01:11:23,866 | INFO     | [job] control thread has finished
[2025-11-30 17:12:05] 2025-12-01 01:11:24,064 | INFO     | [job] validate thread has finished
[2025-11-30 17:12:05] 2025-12-01 01:11:24,109 | INFO     | [data] copytool_in thread has finished
[2025-11-30 17:12:05] 2025-12-01 01:11:24,178 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 17:12:05] 2025-12-01 01:11:24,248 | INFO     | [payload] validate_post thread has finished
[2025-11-30 17:12:05] 2025-12-01 01:11:24,717 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 17:12:05] 2025-12-01 01:11:24,945 | INFO     | [data] copytool_out thread has finished
[2025-11-30 17:12:05] 2025-12-01 01:11:28,723 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 17:12:05] 2025-12-01 01:11:51,780 | INFO     | PID=306082 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-30 17:12:05] 2025-12-01 01:11:51,780 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 17:12:05] 2025-12-01 01:11:51,780 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 17:12:05] 2025-12-01 01:11:51,780 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 17:12:05] 2025-12-01 01:11:58,326 | INFO     | [monitor] cgroup control has ended
[2025-11-30 17:12:05] 2025-12-01 01:12:00,367 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139886129977152)>', '<ExcThread(monitor, started 139885457430272)>']
[2025-11-30 17:12:05] 2025-12-01 01:12:00,825 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 17:12:05] 2025-12-01 01:12:00,825 | INFO     | [monitor] control thread has ended
[2025-11-30 17:12:05] 2025-12-01 01:12:05,392 | INFO     | all workflow threads have been joined
[2025-11-30 17:12:05] 2025-12-01 01:12:05,392 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 17:12:05] 2025-12-01 01:12:05,393 | INFO     | traces error code: 0
[2025-11-30 17:12:05] 2025-12-01 01:12:05,393 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 17:12:05] 2025-12-01 01:12:05,467 [wrapper] ==== pilot stdout END ====
[2025-11-30 17:12:05] 2025-12-01 01:12:05,469 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 17:12:05] 2025-12-01 01:12:05,470 [wrapper] pilotpid: 306082
[2025-11-30 17:12:05] 2025-12-01 01:12:05,472 [wrapper] Pilot exit status: 0
[2025-11-30 17:12:05] 2025-12-01 01:12:05,478 [wrapper] pandaids: 6905292715
[2025-11-30 17:12:05] 2025-12-01 01:12:05,499 [wrapper] cleanup supervisor_pilot  306088 306083
[2025-11-30 17:12:05] 2025-12-01 01:12:05,500 [wrapper] Test setup, not cleaning
[2025-11-30 17:12:05] 2025-12-01 01:12:05,502 [wrapper] apfmon messages muted
[2025-11-30 17:12:05] 2025-12-01 01:12:05,504 [wrapper] ==== wrapper stdout END ====
[2025-11-30 17:12:05] 2025-12-01 01:12:05,505 [wrapper] ==== wrapper stderr END ====
[2025-11-30 17:12:05]  *** Error codes and diagnostics ***
[2025-11-30 17:12:05]     "exeErrorCode": 65,
[2025-11-30 17:12:05]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-30 17:12:05]     "pilotErrorCode": 1305,
[2025-11-30 17:12:05]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-30 17:12:05]  *** Listing of results directory ***
[2025-11-30 17:12:05] total 373668
[2025-11-30 17:12:05] -rw-r--r--. 1 boinc boinc    576529 Nov 29 16:16 pilot3.tar.gz
[2025-11-30 17:12:05] -rwx------. 1 boinc boinc     36292 Nov 29 16:19 runpilot2-wrapper.sh
[2025-11-30 17:12:05] -rw-r--r--. 1 boinc boinc      5112 Nov 29 16:24 queuedata.json
[2025-11-30 17:12:05] -rw-r--r--. 1 boinc boinc       100 Nov 30 17:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 17:12:05] -rwxr-xr-x. 1 boinc boinc      7986 Nov 30 17:07 run_atlas
[2025-11-30 17:12:05] -rw-r--r--. 1 boinc boinc       105 Nov 30 17:07 job.xml
[2025-11-30 17:12:05] -rw-r--r--. 2 boinc boinc 378438570 Nov 30 17:07 EVNT.47528871._000112.pool.root.1
[2025-11-30 17:12:05] -rw-r--r--. 2 boinc boinc     15847 Nov 30 17:07 start_atlas.sh
[2025-11-30 17:12:05] drwxrwx--x. 2 boinc boinc      4096 Nov 30 17:07 shared
[2025-11-30 17:12:05] -rw-r--r--. 2 boinc boinc    590135 Nov 30 17:07 input.tar.gz
[2025-11-30 17:12:05] -rw-r--r--. 1 boinc boinc      6597 Nov 30 17:07 init_data.xml
[2025-11-30 17:12:05] -rw-r--r--. 1 boinc boinc         0 Nov 30 17:07 boinc_lockfile
[2025-11-30 17:12:05] -rw-r--r--. 1 boinc boinc      2881 Nov 30 17:07 pandaJob.out
[2025-11-30 17:12:05] -rw-------. 1 boinc boinc    993253 Nov 30 17:07 agis_schedconf.cvmfs.json
[2025-11-30 17:12:05] -rw-------. 1 boinc boinc   1516240 Nov 30 17:07 agis_ddmendpoints.agis.ALL.json
[2025-11-30 17:12:05] drwx------. 5 boinc boinc      4096 Nov 30 17:07 pilot3
[2025-11-30 17:12:05] -rw-r--r--. 1 boinc boinc       523 Nov 30 17:08 boinc_task_state.xml
[2025-11-30 17:12:05] -rw-------. 1 boinc boinc       951 Nov 30 17:09 memory_monitor_summary.json
[2025-11-30 17:12:05] -rw-------. 1 boinc boinc     48376 Nov 30 17:09 log.47538113._002812.job.log.tgz.1
[2025-11-30 17:12:05] -rw-------. 1 boinc boinc        95 Nov 30 17:10 pilot_heartbeat.json
[2025-11-30 17:12:05] -rw-------. 1 boinc boinc      9921 Nov 30 17:11 heartbeat.json
[2025-11-30 17:12:05] -rw-r--r--. 1 boinc boinc      8192 Nov 30 17:11 boinc_mmap_file
[2025-11-30 17:12:05] -rw-r--r--. 1 boinc boinc        23 Nov 30 17:11 wrapper_checkpoint.txt
[2025-11-30 17:12:05] -rw-------. 1 boinc boinc      4746 Nov 30 17:12 pilotlog.txt
[2025-11-30 17:12:05] -rw-------. 1 boinc boinc     92678 Nov 30 17:12 log.47538113._002812.job.log.1
[2025-11-30 17:12:05] -rw-------. 1 boinc boinc       186 Nov 30 17:12 output.list
[2025-11-30 17:12:05] -rw-r--r--. 1 boinc boinc       620 Nov 30 17:12 runtime_log
[2025-11-30 17:12:05] -rw-------. 1 boinc boinc    163840 Nov 30 17:12 result.tar.gz
[2025-11-30 17:12:05] -rw-------. 1 boinc boinc       643 Nov 30 17:12 wJKNDmrKkj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQ9LKDm7kSzen.diag
[2025-11-30 17:12:05] -rw-r--r--. 1 boinc boinc      8636 Nov 30 17:12 runtime_log.err
[2025-11-30 17:12:05] -rw-r--r--. 1 boinc boinc     22372 Nov 30 17:12 stderr.txt
[2025-11-30 17:12:05] No HITS result produced
[2025-11-30 17:12:05]  *** Contents of shared directory: ***
[2025-11-30 17:12:05] total 370332
[2025-11-30 17:12:05] -rw-r--r--. 2 boinc boinc 378438570 Nov 30 17:07 ATLAS.root_0
[2025-11-30 17:12:05] -rw-r--r--. 2 boinc boinc     15847 Nov 30 17:07 start_atlas.sh
[2025-11-30 17:12:05] -rw-r--r--. 2 boinc boinc    590135 Nov 30 17:07 input.tar.gz
[2025-11-30 17:12:05] -rw-------. 1 boinc boinc    163840 Nov 30 17:12 result.tar.gz
17:12:06 (302394): run_atlas exited; CPU time 49.260181
17:12:06 (302394): called boinc_finish(0)

</stderr_txt>
]]>

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