Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:54:21 (3486406): wrapper (7.7.26015): starting
16:54:21 (3486406): wrapper: running run_atlas (--nthreads 8)
[2025-11-30 16:54:21] Arguments: --nthreads 8
[2025-11-30 16:54:21] Threads: 8
[2025-11-30 16:54:21] Checking for CVMFS
[2025-11-30 16:54:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 16:54:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 16:54:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 16:54:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 16:54:22] 2.11.3.0 952781 34890 276668 153499 1 304 38100256 45568000 1503 130560 0 194261218 99.808 116070687 22658 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-30 16:54:22] CVMFS is ok
[2025-11-30 16:54:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 16:54:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 16:54:22] Further information can be found at the LHC@home message board.
[2025-11-30 16:54:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 16:54:22] Checking for apptainer binary...
[2025-11-30 16:54:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 16:54:22] Running /usr/bin/apptainer --version
[2025-11-30 16:54:22] apptainer version 1.4.1-1.el9
[2025-11-30 16:54:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 16:54:22] wns0021.triumf.lcg
[2025-11-30 16:54:22] apptainer works
[2025-11-30 16:54:22] Set ATHENA_PROC_NUMBER=8
[2025-11-30 16:54:22] Set ATHENA_CORE_NUMBER=8
[2025-11-30 16:54:22] Starting ATLAS job with PandaID=6905166465
[2025-11-30 16:54:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 16:58:36]  *** The last 200 lines of the pilot log: ***
[2025-11-30 16:58:36] 2025-12-01 00:58:00,853 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-30 16:58:36] 2025-12-01 00:58:00,853 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-30 16:58:36] 2025-12-01 00:58:00,853 | WARNING  | wrong length of table data, x=[1764550495.0, 1764550556.0], y=[1349.0, 224436.0] (must be same and length>=4)
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | could have reported an average CPU frequency of 2085 MHz (4 samples)
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | ..............................
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | . Timing measurements:
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | . get job = 0 s
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | . initial setup = 2 s
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | . payload setup = 6 s
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | . stage-in = 0 s
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | . payload execution = 67 s
[2025-11-30 16:58:36] 2025-12-01 00:58:00,855 | INFO     | . stage-out = 0 s
[2025-11-30 16:58:36] 2025-12-01 00:58:00,855 | INFO     | . log creation = 0 s
[2025-11-30 16:58:36] 2025-12-01 00:58:00,855 | INFO     | ..............................
[2025-11-30 16:58:36] 2025-12-01 00:58:00,855 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-30 16:58:36] 2025-12-01 00:58:00,855 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905166465/pilotlog.txt
[2025-11-30 16:58:36] 2025-12-01 00:58:00,865 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-30 16:58:36] - Log from pilotlog.txt -
[2025-11-30 16:58:36] 2025-12-01 00:58:00,851 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6905166465/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 16:58:36] 2025-12-01 00:58:00,852 | INFO     | extracted standard info from prmon json
[2025-11-30 16:58:36] 2025-12-01 00:58:00,852 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 16:58:36] 2025-12-01 00:58:00,852 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 16:58:36] 2025-12-01 00:58:00,853 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-30 16:58:36] 2025-12-01 00:58:00,853 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-30 16:58:36] 2025-12-01 00:58:00,853 | WARNING  | wrong length of table data, x=[1764550495.0, 1764550556.0], y=[1349.0, 224436.0] (must be same and length>=4)
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | could have reported an average CPU frequency of 2085 MHz (4 samples)
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | ..............................
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | . Timing measurements:
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | . get job = 0 s
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | . initial setup = 2 s
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | . payload setup = 6 s
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | . stage-in = 0 s
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | . payload execution = 67 s
[2025-11-30 16:58:36] 2025-12-01 00:58:00,855 | INFO     | . stage-out = 0 s
[2025-11-30 16:58:36] 2025-12-01 00:58:00,855 | INFO     | . log creation = 0 s
[2025-11-30 16:58:36] 2025-12-01 00:58:00,855 | INFO     | ..............................
[2025-11-30 16:58:36] 2025-12-01 00:58:00,855 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-30 16:58:36] 2025-12-01 00:58:00,855 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905166465/pilotlog.txt
[2025-11-30 16:58:36] 2025-12-01 00:58:00,865 | WARNING  | 
[2025-11-30 16:58:36] [begin log extracts]
[2025-11-30 16:58:36] - Log from pilotlog.txt -
[2025-11-30 16:58:36] 2025-12-01 00:58:00,851 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6905166465/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 16:58:36] 2025-12-01 00:58:00,852 | INFO     | extracted standard info from prmon json
[2025-11-30 16:58:36] 2025-12-01 00:58:00,852 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 16:58:36] 2025-12-01 00:58:00,852 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 16:58:36] 2025-12-01 00:58:00,853 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-30 16:58:36] 2025-12-01 00:58:00,853 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-30 16:58:36] 2025-12-01 00:58:00,853 | WARNING  | wrong length of table data, x=[1764550495.0, 1764550556.0], y=[1349.0, 224436.0] (must be same and length>=4)
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | could have reported an average CPU frequency of 2085 MHz (4 samples)
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | ..............................
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | . Timing measurements:
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | . get job = 0 s
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | . initial setup = 2 s
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | . payload setup = 6 s
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | . stage-in = 0 s
[2025-11-30 16:58:36] 2025-12-01 00:58:00,854 | INFO     | . payload execution = 67 s
[2025-11-30 16:58:36] 2025-12-01 00:58:00,855 | INFO     | . stage-out = 0 s
[2025-11-30 16:58:36] 2025-12-01 00:58:00,855 | INFO     | . log creation = 0 s
[2025-11-30 16:58:36] 2025-12-01 00:58:00,855 | INFO     | ..............................
[2025-11-30 16:58:36] 2025-12-01 00:58:00,855 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-30 16:58:36] 2025-12-01 00:58:00,855 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905166465/pilotlog.txt
[2025-11-30 16:58:36] [end log extracts]
[2025-11-30 16:58:36] 2025-12-01 00:58:00,866 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-30 16:58:36] 2025-12-01 00:58:00,866 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-30 16:58:36] 2025-12-01 00:58:00,933 | INFO     | 
[2025-11-30 16:58:36] 2025-12-01 00:58:00,933 | INFO     | job summary report
[2025-11-30 16:58:36] 2025-12-01 00:58:00,933 | INFO     | --------------------------------------------------
[2025-11-30 16:58:36] 2025-12-01 00:58:00,933 | INFO     | PanDA job id: 6905166465
[2025-11-30 16:58:36] 2025-12-01 00:58:00,933 | INFO     | task id: 47538113
[2025-11-30 16:58:36] 2025-12-01 00:58:00,933 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-30 16:55:55,341 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-30 16:58:36] 2025-12-01 00:58:00,933 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-30 16:58:36] 2025-12-01 00:58:00,933 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 16:58:36] 2025-12-01 00:58:00,933 | INFO     | pilot state: failed 
[2025-11-30 16:58:36] 2025-12-01 00:58:00,933 | INFO     | transexitcode: 65
[2025-11-30 16:58:36] 2025-12-01 00:58:00,934 | INFO     | exeerrorcode: 65
[2025-11-30 16:58:36] 2025-12-01 00:58:00,934 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-30 16:58:36] 2025-12-01 00:58:00,934 | INFO     | exitcode: 65
[2025-11-30 16:58:36] 2025-12-01 00:58:00,934 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-30 16:58:36] 2025-12-01 00:58:00,934 | INFO     | cpuconsumptiontime: 63 s
[2025-11-30 16:58:36] 2025-12-01 00:58:00,934 | INFO     | nevents: 0
[2025-11-30 16:58:36] 2025-12-01 00:58:00,935 | INFO     | neventsw: 0
[2025-11-30 16:58:36] 2025-12-01 00:58:00,935 | INFO     | pid: 3509434
[2025-11-30 16:58:36] 2025-12-01 00:58:00,935 | INFO     | pgrp: 3509434
[2025-11-30 16:58:36] 2025-12-01 00:58:00,935 | INFO     | corecount: 8
[2025-11-30 16:58:36] 2025-12-01 00:58:00,935 | INFO     | event service: False
[2025-11-30 16:58:36] 2025-12-01 00:58:00,935 | INFO     | sizes: {0: 2284226, 1: 2284425, 4: 2284687, 11: 2284715, 78: 2312632, 79: 2312632, 197: 2312954}
[2025-11-30 16:58:36] 2025-12-01 00:58:00,935 | INFO     | --------------------------------------------------
[2025-11-30 16:58:36] 2025-12-01 00:58:00,935 | INFO     | 
[2025-11-30 16:58:36] 2025-12-01 00:58:00,935 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-30 16:58:36] 2025-12-01 00:58:00,948 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 16:58:36] 2025-12-01 00:58:00,948 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 16:58:36] 2025-12-01 00:58:00,948 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 16:58:36] 2025-12-01 00:58:00,949 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 16:58:36] 2025-12-01 00:58:00,949 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 16:58:36] 2025-12-01 00:58:00,949 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 16:58:36] 2025-12-01 00:58:00,949 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 16:58:36] 2025-12-01 00:58:00,949 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 16:58:36] 2025-12-01 00:58:00,949 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 16:58:36] 2025-12-01 00:58:00,949 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 16:58:36] 2025-12-01 00:58:00,949 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 16:58:36] 2025-12-01 00:58:00,949 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 16:58:36] 2025-12-01 00:58:00,949 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 16:58:36] 2025-12-01 00:58:00,949 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 16:58:36] 2025-12-01 00:58:00,949 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 16:58:36] 2025-12-01 00:58:00,950 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 16:58:36] 2025-12-01 00:58:00,950 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 16:58:36] 2025-12-01 00:58:00,950 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 16:58:36] 2025-12-01 00:58:00,950 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 16:58:36] 2025-12-01 00:58:00,950 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 16:58:36] 2025-12-01 00:58:00,950 | INFO     | job 6905166465 has completed (purged errors)
[2025-11-30 16:58:36] 2025-12-01 00:58:00,950 | INFO     | overall cleanup function is called
[2025-11-30 16:58:36] 2025-12-01 00:58:01,957 | INFO     | --- collectZombieJob: --- 10, [3509434]
[2025-11-30 16:58:36] 2025-12-01 00:58:01,957 | INFO     | zombie collector waiting for pid 3509434
[2025-11-30 16:58:36] 2025-12-01 00:58:01,957 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 16:58:36] 2025-12-01 00:58:01,957 | INFO     | collected zombie processes
[2025-11-30 16:58:36] 2025-12-01 00:58:01,957 | INFO     | will attempt to kill all subprocesses of pid=3509434
[2025-11-30 16:58:36] 2025-12-01 00:58:02,068 | INFO     | process IDs to be killed: [3509434] (in reverse order)
[2025-11-30 16:58:36] 2025-12-01 00:58:02,100 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 16:58:36] 2025-12-01 00:58:02,101 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 16:58:36] 2025-12-01 00:58:02,103 | INFO     | did not find any defunct processes belonging to 3509434
[2025-11-30 16:58:36] 2025-12-01 00:58:02,106 | INFO     | did not find any defunct processes belonging to 3509434
[2025-11-30 16:58:36] 2025-12-01 00:58:02,106 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 16:58:36] 2025-12-01 00:58:02,107 | INFO     | ready for new job
[2025-11-30 16:58:36] 2025-12-01 00:58:02,107 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 16:58:36] 2025-12-01 00:58:02,108 | INFO     | ***************************************
[2025-11-30 16:58:36] 2025-12-01 00:58:02,108 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 16:58:36] 2025-12-01 00:58:02,108 | INFO     | ***************************************
[2025-11-30 16:58:36] 2025-12-01 00:58:02,108 | INFO     | 
[2025-11-30 16:58:36] 2025-12-01 00:58:02,109 | INFO     | architecture information:
[2025-11-30 16:58:36] 2025-12-01 00:58:02,110 | INFO     | executing command: cat /etc/os-release
[2025-11-30 16:58:36] 2025-12-01 00:58:02,118 | INFO     | cat /etc/os-release:
[2025-11-30 16:58:36] NAME="CentOS Linux"
[2025-11-30 16:58:36] VERSION="7 (Core)"
[2025-11-30 16:58:36] ID="centos"
[2025-11-30 16:58:36] ID_LIKE="rhel fedora"
[2025-11-30 16:58:36] VERSION_ID="7"
[2025-11-30 16:58:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 16:58:36] ANSI_COLOR="0;31"
[2025-11-30 16:58:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 16:58:36] HOME_URL="https://www.centos.org/"
[2025-11-30 16:58:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 16:58:36] 
[2025-11-30 16:58:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 16:58:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 16:58:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 16:58:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 16:58:36] 
[2025-11-30 16:58:36] 2025-12-01 00:58:02,119 | INFO     | ***************************************
[2025-11-30 16:58:36] 2025-12-01 00:58:02,621 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-30 16:58:36] 2025-12-01 00:58:02,632 | INFO     | sufficient remaining disk space (1453888372736 B)
[2025-11-30 16:58:36] 2025-12-01 00:58:02,633 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 16:58:36] 2025-12-01 00:58:02,633 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 16:58:36] 2025-12-01 00:58:02,633 | INFO     | update_server=False
[2025-11-30 16:58:36] 2025-12-01 00:58:02,633 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 16:58:36] 2025-12-01 00:58:02,633 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-30 16:58:36] 2025-12-01 00:58:02,633 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 16:58:36] 2025-12-01 00:58:02,634 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 16:58:36] 2025-12-01 00:58:02,634 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 16:58:36] 2025-12-01 00:58:02,634 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 16:58:36] 2025-12-01 00:58:02,938 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 16:58:36] 2025-12-01 00:58:02,938 | INFO     | aborting loop
[2025-11-30 16:58:36] 2025-12-01 00:58:03,037 | INFO     | all data control threads have been joined
[2025-11-30 16:58:36] 2025-12-01 00:58:03,254 | INFO     | all job control threads have been joined
[2025-11-30 16:58:36] 2025-12-01 00:58:03,267 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 16:58:36] 2025-12-01 00:58:03,638 | INFO     | [job] retrieve thread has finished
[2025-11-30 16:58:36] 2025-12-01 00:58:03,639 | INFO     | [job] queue monitor thread has finished
[2025-11-30 16:58:36] 2025-12-01 00:58:03,719 | INFO     | all payload control threads have been joined
[2025-11-30 16:58:36] 2025-12-01 00:58:03,776 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 16:58:36] 2025-12-01 00:58:03,908 | INFO     | [data] copytool_in thread has finished
[2025-11-30 16:58:36] 2025-12-01 00:58:03,943 | INFO     | [job] job monitor thread has finished
[2025-11-30 16:58:36] 2025-12-01 00:58:04,042 | INFO     | [data] control thread has finished
[2025-11-30 16:58:36] 2025-12-01 00:58:04,103 | INFO     | [payload] validate_post thread has finished
[2025-11-30 16:58:36] 2025-12-01 00:58:04,259 | INFO     | [job] control thread has finished
[2025-11-30 16:58:36] 2025-12-01 00:58:04,724 | INFO     | [payload] control thread has finished
[2025-11-30 16:58:36] 2025-12-01 00:58:04,972 | INFO     | [job] validate thread has finished
[2025-11-30 16:58:36] 2025-12-01 00:58:04,972 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 16:58:36] 2025-12-01 00:58:05,032 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 16:58:36] 2025-12-01 00:58:05,132 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 16:58:36] 2025-12-01 00:58:05,227 | INFO     | [payload] failed_post thread has finished
[2025-11-30 16:58:36] 2025-12-01 00:58:05,272 | INFO     | [data] copytool_out thread has finished
[2025-11-30 16:58:36] 2025-12-01 00:58:05,781 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 16:58:36] 2025-12-01 00:58:09,787 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 16:58:36] 2025-12-01 00:58:30,255 | INFO     | [monitor] cgroup control has ended
[2025-11-30 16:58:36] 2025-12-01 00:58:31,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140097805784896)>', '<ExcThread(monitor, started 140096984569600)>']
[2025-11-30 16:58:36] 2025-12-01 00:58:31,780 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 16:58:36] 2025-12-01 00:58:31,780 | INFO     | [monitor] control thread has ended
[2025-11-30 16:58:36] 2025-12-01 00:58:36,286 | INFO     | all workflow threads have been joined
[2025-11-30 16:58:36] 2025-12-01 00:58:36,286 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 16:58:36] 2025-12-01 00:58:36,286 | INFO     | traces error code: 0
[2025-11-30 16:58:36] 2025-12-01 00:58:36,286 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 16:58:36] 2025-12-01 00:58:36,363 [wrapper] ==== pilot stdout END ====
[2025-11-30 16:58:36] 2025-12-01 00:58:36,365 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 16:58:36] 2025-12-01 00:58:36,367 [wrapper] pilotpid: 3492899
[2025-11-30 16:58:36] 2025-12-01 00:58:36,369 [wrapper] Pilot exit status: 0
[2025-11-30 16:58:36] 2025-12-01 00:58:36,376 [wrapper] pandaids: 6905166465
[2025-11-30 16:58:36] 2025-12-01 00:58:36,396 [wrapper] cleanup supervisor_pilot 3492907 3492900
[2025-11-30 16:58:36] 2025-12-01 00:58:36,398 [wrapper] Test setup, not cleaning
[2025-11-30 16:58:36] 2025-12-01 00:58:36,400 [wrapper] apfmon messages muted
[2025-11-30 16:58:36] 2025-12-01 00:58:36,402 [wrapper] ==== wrapper stdout END ====
[2025-11-30 16:58:36] 2025-12-01 00:58:36,403 [wrapper] ==== wrapper stderr END ====
[2025-11-30 16:58:36]  *** Error codes and diagnostics ***
[2025-11-30 16:58:36]     "exeErrorCode": 65,
[2025-11-30 16:58:36]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-30 16:58:36]     "pilotErrorCode": 1305,
[2025-11-30 16:58:36]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-30 16:58:36]  *** Listing of results directory ***
[2025-11-30 16:58:36] total 370652
[2025-11-30 16:58:36] -rw-r--r--. 1 boinc boinc    576529 Nov 29 16:16 pilot3.tar.gz
[2025-11-30 16:58:36] -rwx------. 1 boinc boinc     36292 Nov 29 16:18 runpilot2-wrapper.sh
[2025-11-30 16:58:36] -rw-r--r--. 1 boinc boinc      5112 Nov 29 16:24 queuedata.json
[2025-11-30 16:58:36] -rw-r--r--. 1 boinc boinc       100 Nov 30 16:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 16:58:36] -rwxr-xr-x. 1 boinc boinc      7986 Nov 30 16:54 run_atlas
[2025-11-30 16:58:36] -rw-r--r--. 1 boinc boinc       105 Nov 30 16:54 job.xml
[2025-11-30 16:58:36] -rw-r--r--. 2 boinc boinc 375345004 Nov 30 16:54 EVNT.47528871._000065.pool.root.1
[2025-11-30 16:58:36] -rw-r--r--. 1 boinc boinc      6447 Nov 30 16:54 init_data.xml
[2025-11-30 16:58:36] -rw-r--r--. 2 boinc boinc     15847 Nov 30 16:54 start_atlas.sh
[2025-11-30 16:58:36] drwxrwx--x. 2 boinc boinc      4096 Nov 30 16:54 shared
[2025-11-30 16:58:36] -rw-r--r--. 2 boinc boinc    590139 Nov 30 16:54 input.tar.gz
[2025-11-30 16:58:36] -rw-r--r--. 1 boinc boinc         0 Nov 30 16:54 boinc_lockfile
[2025-11-30 16:58:36] -rw-r--r--. 1 boinc boinc      2879 Nov 30 16:54 pandaJob.out
[2025-11-30 16:58:36] -rw-------. 1 boinc boinc    993253 Nov 30 16:54 agis_schedconf.cvmfs.json
[2025-11-30 16:58:36] -rw-------. 1 boinc boinc   1516240 Nov 30 16:54 agis_ddmendpoints.agis.ALL.json
[2025-11-30 16:58:36] drwx------. 5 boinc boinc      4096 Nov 30 16:54 pilot3
[2025-11-30 16:58:36] -rw-r--r--. 1 boinc boinc       523 Nov 30 16:55 boinc_task_state.xml
[2025-11-30 16:58:36] -rw-------. 1 boinc boinc       992 Nov 30 16:55 memory_monitor_summary.json
[2025-11-30 16:58:36] -rw-------. 1 boinc boinc     50138 Nov 30 16:56 log.47538113._002369.job.log.tgz.1
[2025-11-30 16:58:36] -rw-------. 1 boinc boinc        95 Nov 30 16:57 pilot_heartbeat.json
[2025-11-30 16:58:36] -rw-------. 1 boinc boinc      9872 Nov 30 16:58 heartbeat.json
[2025-11-30 16:58:36] -rw-r--r--. 1 boinc boinc      8192 Nov 30 16:58 boinc_mmap_file
[2025-11-30 16:58:36] -rw-r--r--. 1 boinc boinc        23 Nov 30 16:58 wrapper_checkpoint.txt
[2025-11-30 16:58:36] -rw-------. 1 boinc boinc      4551 Nov 30 16:58 pilotlog.txt
[2025-11-30 16:58:36] -rw-------. 1 boinc boinc     94963 Nov 30 16:58 log.47538113._002369.job.log.1
[2025-11-30 16:58:36] -rw-------. 1 boinc boinc       186 Nov 30 16:58 output.list
[2025-11-30 16:58:36] -rw-r--r--. 1 boinc boinc       620 Nov 30 16:58 runtime_log
[2025-11-30 16:58:36] -rw-------. 1 boinc boinc    163840 Nov 30 16:58 result.tar.gz
[2025-11-30 16:58:36] -rw-------. 1 boinc boinc       643 Nov 30 16:58 s5zKDmgKkj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmb6LKDmmdoOnn.diag
[2025-11-30 16:58:36] -rw-r--r--. 1 boinc boinc      8634 Nov 30 16:58 runtime_log.err
[2025-11-30 16:58:36] -rw-r--r--. 1 boinc boinc     22382 Nov 30 16:58 stderr.txt
[2025-11-30 16:58:36] No HITS result produced
[2025-11-30 16:58:36]  *** Contents of shared directory: ***
[2025-11-30 16:58:36] total 367308
[2025-11-30 16:58:36] -rw-r--r--. 2 boinc boinc 375345004 Nov 30 16:54 ATLAS.root_0
[2025-11-30 16:58:36] -rw-r--r--. 2 boinc boinc     15847 Nov 30 16:54 start_atlas.sh
[2025-11-30 16:58:36] -rw-r--r--. 2 boinc boinc    590139 Nov 30 16:54 input.tar.gz
[2025-11-30 16:58:36] -rw-------. 1 boinc boinc    163840 Nov 30 16:58 result.tar.gz
16:58:37 (3486406): run_atlas exited; CPU time 61.739526
16:58:37 (3486406): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN