Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:03:26 (2525162): wrapper (7.7.26015): starting
17:03:26 (2525162): wrapper: running run_atlas (--nthreads 12)
[2025-11-30 17:03:26] Arguments: --nthreads 12
[2025-11-30 17:03:26] Threads: 12
[2025-11-30 17:03:26] Checking for CVMFS
[2025-11-30 17:03:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 17:03:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 17:03:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 17:03:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 17:03:26] 2.11.5.0 2097640 34606 224792 153499 1 119 41445777 45568000 1226 130560 0 336839621 99.803 189681172 23118 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-30 17:03:26] CVMFS is ok
[2025-11-30 17:03:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 17:03:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 17:03:26] Further information can be found at the LHC@home message board.
[2025-11-30 17:03:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 17:03:26] Checking for apptainer binary...
[2025-11-30 17:03:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 17:03:26] Running /usr/bin/apptainer --version
[2025-11-30 17:03:26] apptainer version 1.4.1-1.el9
[2025-11-30 17:03:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 17:03:26] wns0049.triumf.lcg
[2025-11-30 17:03:26] apptainer works
[2025-11-30 17:03:26] Set ATHENA_PROC_NUMBER=12
[2025-11-30 17:03:26] Set ATHENA_CORE_NUMBER=12
[2025-11-30 17:03:26] Starting ATLAS job with PandaID=6905167944
[2025-11-30 17:03:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 17:07:40]  *** The last 200 lines of the pilot log: ***
[2025-11-30 17:07:40] 2025-12-01 01:06:50,853 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-30 17:07:40] 2025-12-01 01:06:50,854 | WARNING  | wrong length of table data, x=[1764551037.0], y=[2260.0] (must be same and length>=4)
[2025-11-30 17:07:40] 2025-12-01 01:06:50,854 | INFO     | could have reported an average CPU frequency of 3237 MHz (4 samples)
[2025-11-30 17:07:40] 2025-12-01 01:06:50,854 | INFO     | ..............................
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . Timing measurements:
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . get job = 0 s
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . initial setup = 2 s
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . payload setup = 6 s
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . stage-in = 0 s
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . payload execution = 56 s
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . stage-out = 0 s
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . log creation = 0 s
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | ..............................
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905167944/pilotlog.txt
[2025-11-30 17:07:40] 2025-12-01 01:06:50,863 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-30 17:07:40] - Log from pilotlog.txt -
[2025-11-30 17:07:40] 2025-12-01 01:06:50,853 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6905167944/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 17:07:40] 2025-12-01 01:06:50,853 | INFO     | extracted standard info from prmon json
[2025-11-30 17:07:40] 2025-12-01 01:06:50,853 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 17:07:40] 2025-12-01 01:06:50,853 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 17:07:40] 2025-12-01 01:06:50,853 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-30 17:07:40] 2025-12-01 01:06:50,853 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-30 17:07:40] 2025-12-01 01:06:50,854 | WARNING  | wrong length of table data, x=[1764551037.0], y=[2260.0] (must be same and length>=4)
[2025-11-30 17:07:40] 2025-12-01 01:06:50,854 | INFO     | could have reported an average CPU frequency of 3237 MHz (4 samples)
[2025-11-30 17:07:40] 2025-12-01 01:06:50,854 | INFO     | ..............................
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . Timing measurements:
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . get job = 0 s
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . initial setup = 2 s
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . payload setup = 6 s
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . stage-in = 0 s
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . payload execution = 56 s
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . stage-out = 0 s
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . log creation = 0 s
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | ..............................
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905167944/pilotlog.txt
[2025-11-30 17:07:40] 2025-12-01 01:06:50,863 | WARNING  | 
[2025-11-30 17:07:40] [begin log extracts]
[2025-11-30 17:07:40] - Log from pilotlog.txt -
[2025-11-30 17:07:40] 2025-12-01 01:06:50,853 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6905167944/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 17:07:40] 2025-12-01 01:06:50,853 | INFO     | extracted standard info from prmon json
[2025-11-30 17:07:40] 2025-12-01 01:06:50,853 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 17:07:40] 2025-12-01 01:06:50,853 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 17:07:40] 2025-12-01 01:06:50,853 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-30 17:07:40] 2025-12-01 01:06:50,853 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-30 17:07:40] 2025-12-01 01:06:50,854 | WARNING  | wrong length of table data, x=[1764551037.0], y=[2260.0] (must be same and length>=4)
[2025-11-30 17:07:40] 2025-12-01 01:06:50,854 | INFO     | could have reported an average CPU frequency of 3237 MHz (4 samples)
[2025-11-30 17:07:40] 2025-12-01 01:06:50,854 | INFO     | ..............................
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . Timing measurements:
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . get job = 0 s
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . initial setup = 2 s
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . payload setup = 6 s
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . stage-in = 0 s
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . payload execution = 56 s
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . stage-out = 0 s
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | . log creation = 0 s
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | ..............................
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-30 17:07:40] 2025-12-01 01:06:50,855 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905167944/pilotlog.txt
[2025-11-30 17:07:40] [end log extracts]
[2025-11-30 17:07:40] 2025-12-01 01:06:50,863 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-30 17:07:40] 2025-12-01 01:06:50,863 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-30 17:07:40] 2025-12-01 01:06:50,913 | INFO     | 
[2025-11-30 17:07:40] 2025-12-01 01:06:50,914 | INFO     | job summary report
[2025-11-30 17:07:40] 2025-12-01 01:06:50,914 | INFO     | --------------------------------------------------
[2025-11-30 17:07:40] 2025-12-01 01:06:50,914 | INFO     | PanDA job id: 6905167944
[2025-11-30 17:07:40] 2025-12-01 01:06:50,914 | INFO     | task id: 47538113
[2025-11-30 17:07:40] 2025-12-01 01:06:50,914 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-30 17:04:45,513 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-30 17:07:40] 2025-12-01 01:06:50,914 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-30 17:07:40] 2025-12-01 01:06:50,914 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 17:07:40] 2025-12-01 01:06:50,914 | INFO     | pilot state: failed 
[2025-11-30 17:07:40] 2025-12-01 01:06:50,914 | INFO     | transexitcode: 65
[2025-11-30 17:07:40] 2025-12-01 01:06:50,914 | INFO     | exeerrorcode: 65
[2025-11-30 17:07:40] 2025-12-01 01:06:50,914 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-30 17:07:40] 2025-12-01 01:06:50,914 | INFO     | exitcode: 65
[2025-11-30 17:07:40] 2025-12-01 01:06:50,914 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-30 17:07:40] 2025-12-01 01:06:50,914 | INFO     | cpuconsumptiontime: 52 s
[2025-11-30 17:07:40] 2025-12-01 01:06:50,914 | INFO     | nevents: 0
[2025-11-30 17:07:40] 2025-12-01 01:06:50,914 | INFO     | neventsw: 0
[2025-11-30 17:07:40] 2025-12-01 01:06:50,914 | INFO     | pid: 2536049
[2025-11-30 17:07:40] 2025-12-01 01:06:50,914 | INFO     | pgrp: 2536049
[2025-11-30 17:07:40] 2025-12-01 01:06:50,914 | INFO     | corecount: 12
[2025-11-30 17:07:40] 2025-12-01 01:06:50,914 | INFO     | event service: False
[2025-11-30 17:07:40] 2025-12-01 01:06:50,915 | INFO     | sizes: {0: 2284397, 3: 2284659, 11: 2284687, 66: 2312521, 184: 2312719}
[2025-11-30 17:07:40] 2025-12-01 01:06:50,915 | INFO     | --------------------------------------------------
[2025-11-30 17:07:40] 2025-12-01 01:06:50,915 | INFO     | 
[2025-11-30 17:07:40] 2025-12-01 01:06:50,915 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-30 17:07:40] 2025-12-01 01:06:50,925 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 17:07:40] 2025-12-01 01:06:50,925 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 17:07:40] 2025-12-01 01:06:50,925 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 17:07:40] 2025-12-01 01:06:50,925 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 17:07:40] 2025-12-01 01:06:50,925 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 17:07:40] 2025-12-01 01:06:50,925 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 17:07:40] 2025-12-01 01:06:50,925 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 17:07:40] 2025-12-01 01:06:50,925 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 17:07:40] 2025-12-01 01:06:50,925 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 17:07:40] 2025-12-01 01:06:50,926 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 17:07:40] 2025-12-01 01:06:50,926 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 17:07:40] 2025-12-01 01:06:50,926 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 17:07:40] 2025-12-01 01:06:50,926 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 17:07:40] 2025-12-01 01:06:50,926 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 17:07:40] 2025-12-01 01:06:50,926 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 17:07:40] 2025-12-01 01:06:50,926 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 17:07:40] 2025-12-01 01:06:50,926 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 17:07:40] 2025-12-01 01:06:50,926 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 17:07:40] 2025-12-01 01:06:50,926 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 17:07:40] 2025-12-01 01:06:50,926 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 17:07:40] 2025-12-01 01:06:50,926 | INFO     | job 6905167944 has completed (purged errors)
[2025-11-30 17:07:40] 2025-12-01 01:06:50,926 | INFO     | overall cleanup function is called
[2025-11-30 17:07:40] 2025-12-01 01:06:51,933 | INFO     | --- collectZombieJob: --- 10, [2536049]
[2025-11-30 17:07:40] 2025-12-01 01:06:51,933 | INFO     | zombie collector waiting for pid 2536049
[2025-11-30 17:07:40] 2025-12-01 01:06:51,934 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 17:07:40] 2025-12-01 01:06:51,934 | INFO     | collected zombie processes
[2025-11-30 17:07:40] 2025-12-01 01:06:51,934 | INFO     | will attempt to kill all subprocesses of pid=2536049
[2025-11-30 17:07:40] 2025-12-01 01:06:52,025 | INFO     | process IDs to be killed: [2536049] (in reverse order)
[2025-11-30 17:07:40] 2025-12-01 01:06:52,057 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 17:07:40] 2025-12-01 01:06:52,057 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 17:07:40] 2025-12-01 01:06:52,060 | INFO     | did not find any defunct processes belonging to 2536049
[2025-11-30 17:07:40] 2025-12-01 01:06:52,062 | INFO     | did not find any defunct processes belonging to 2536049
[2025-11-30 17:07:40] 2025-12-01 01:06:52,063 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 17:07:40] 2025-12-01 01:06:52,063 | INFO     | ready for new job
[2025-11-30 17:07:40] 2025-12-01 01:06:52,063 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 17:07:40] 2025-12-01 01:06:52,064 | INFO     | ***************************************
[2025-11-30 17:07:40] 2025-12-01 01:06:52,064 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 17:07:40] 2025-12-01 01:06:52,064 | INFO     | ***************************************
[2025-11-30 17:07:40] 2025-12-01 01:06:52,064 | INFO     | 
[2025-11-30 17:07:40] 2025-12-01 01:06:52,066 | INFO     | architecture information:
[2025-11-30 17:07:40] 2025-12-01 01:06:52,066 | INFO     | executing command: cat /etc/os-release
[2025-11-30 17:07:40] 2025-12-01 01:06:52,072 | INFO     | cat /etc/os-release:
[2025-11-30 17:07:40] NAME="CentOS Linux"
[2025-11-30 17:07:40] VERSION="7 (Core)"
[2025-11-30 17:07:40] ID="centos"
[2025-11-30 17:07:40] ID_LIKE="rhel fedora"
[2025-11-30 17:07:40] VERSION_ID="7"
[2025-11-30 17:07:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 17:07:40] ANSI_COLOR="0;31"
[2025-11-30 17:07:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 17:07:40] HOME_URL="https://www.centos.org/"
[2025-11-30 17:07:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 17:07:40] 
[2025-11-30 17:07:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 17:07:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 17:07:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 17:07:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 17:07:40] 
[2025-11-30 17:07:40] 2025-12-01 01:06:52,072 | INFO     | ***************************************
[2025-11-30 17:07:40] 2025-12-01 01:06:52,575 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-30 17:07:40] 2025-12-01 01:06:52,583 | INFO     | sufficient remaining disk space (2221960855552 B)
[2025-11-30 17:07:40] 2025-12-01 01:06:52,583 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 17:07:40] 2025-12-01 01:06:52,583 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 17:07:40] 2025-12-01 01:06:52,583 | INFO     | update_server=False
[2025-11-30 17:07:40] 2025-12-01 01:06:52,583 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 17:07:40] 2025-12-01 01:06:52,584 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 17:07:40] 2025-12-01 01:06:52,812 | INFO     | all job control threads have been joined
[2025-11-30 17:07:40] 2025-12-01 01:06:53,002 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 17:07:40] 2025-12-01 01:06:53,002 | INFO     | aborting loop
[2025-11-30 17:07:40] 2025-12-01 01:06:53,008 | INFO     | all data control threads have been joined
[2025-11-30 17:07:40] 2025-12-01 01:06:53,380 | INFO     | all payload control threads have been joined
[2025-11-30 17:07:40] 2025-12-01 01:06:53,589 | INFO     | [job] retrieve thread has finished
[2025-11-30 17:07:40] 2025-12-01 01:06:53,589 | INFO     | [job] queue monitor thread has finished
[2025-11-30 17:07:40] 2025-12-01 01:06:53,595 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 17:07:40] 2025-12-01 01:06:53,817 | INFO     | [job] control thread has finished
[2025-11-30 17:07:40] 2025-12-01 01:06:53,927 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 17:07:40] 2025-12-01 01:06:54,000 | INFO     | [payload] failed_post thread has finished
[2025-11-30 17:07:40] 2025-12-01 01:06:54,007 | INFO     | [job] job monitor thread has finished
[2025-11-30 17:07:40] 2025-12-01 01:06:54,013 | INFO     | [data] control thread has finished
[2025-11-30 17:07:40] 2025-12-01 01:06:54,070 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 17:07:40] 2025-12-01 01:06:54,385 | INFO     | [payload] control thread has finished
[2025-11-30 17:07:40] 2025-12-01 01:06:54,506 | INFO     | [payload] validate_post thread has finished
[2025-11-30 17:07:40] 2025-12-01 01:06:54,624 | INFO     | [job] validate thread has finished
[2025-11-30 17:07:40] 2025-12-01 01:06:54,629 | INFO     | [data] copytool_in thread has finished
[2025-11-30 17:07:40] 2025-12-01 01:06:54,752 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 17:07:40] 2025-12-01 01:06:54,839 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 17:07:40] 2025-12-01 01:06:55,600 | INFO     | [data] copytool_out thread has finished
[2025-11-30 17:07:40] 2025-12-01 01:06:56,085 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 17:07:40] 2025-12-01 01:07:00,091 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 17:07:40] 2025-12-01 01:07:22,727 | INFO     | PID=2528839 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-30 17:07:40] 2025-12-01 01:07:22,727 | INFO     | .. there are 2 such processes running
[2025-11-30 17:07:40] 2025-12-01 01:07:22,728 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 17:07:40] 2025-12-01 01:07:22,728 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 17:07:40] 2025-12-01 01:07:22,728 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 17:07:40] 2025-12-01 01:07:33,420 | INFO     | [monitor] cgroup control has ended
[2025-11-30 17:07:40] 2025-12-01 01:07:34,945 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140095996323648)>', '<ExcThread(monitor, started 140095675930368)>']
[2025-11-30 17:07:40] 2025-12-01 01:07:35,793 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 17:07:40] 2025-12-01 01:07:35,793 | INFO     | [monitor] control thread has ended
[2025-11-30 17:07:40] 2025-12-01 01:07:39,970 | INFO     | all workflow threads have been joined
[2025-11-30 17:07:40] 2025-12-01 01:07:39,971 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 17:07:40] 2025-12-01 01:07:39,971 | INFO     | traces error code: 0
[2025-11-30 17:07:40] 2025-12-01 01:07:39,971 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 17:07:40] 2025-12-01 01:07:40,046 [wrapper] ==== pilot stdout END ====
[2025-11-30 17:07:40] 2025-12-01 01:07:40,048 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 17:07:40] 2025-12-01 01:07:40,050 [wrapper] pilotpid: 2528839
[2025-11-30 17:07:40] 2025-12-01 01:07:40,051 [wrapper] Pilot exit status: 0
[2025-11-30 17:07:40] 2025-12-01 01:07:40,057 [wrapper] pandaids: 6905167944
[2025-11-30 17:07:40] 2025-12-01 01:07:40,079 [wrapper] cleanup supervisor_pilot 2528845 2528840
[2025-11-30 17:07:40] 2025-12-01 01:07:40,081 [wrapper] Test setup, not cleaning
[2025-11-30 17:07:40] 2025-12-01 01:07:40,083 [wrapper] apfmon messages muted
[2025-11-30 17:07:40] 2025-12-01 01:07:40,084 [wrapper] ==== wrapper stdout END ====
[2025-11-30 17:07:40] 2025-12-01 01:07:40,086 [wrapper] ==== wrapper stderr END ====
[2025-11-30 17:07:40]  *** Error codes and diagnostics ***
[2025-11-30 17:07:40]     "exeErrorCode": 65,
[2025-11-30 17:07:40]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-30 17:07:40]     "pilotErrorCode": 1305,
[2025-11-30 17:07:40]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-30 17:07:40]  *** Listing of results directory ***
[2025-11-30 17:07:40] total 372008
[2025-11-30 17:07:40] -rw-r--r--. 1 boinc boinc    576529 Nov 29 16:16 pilot3.tar.gz
[2025-11-30 17:07:40] -rwx------. 1 boinc boinc     36292 Nov 29 16:18 runpilot2-wrapper.sh
[2025-11-30 17:07:40] -rw-r--r--. 1 boinc boinc      5112 Nov 29 16:23 queuedata.json
[2025-11-30 17:07:40] -rw-r--r--. 1 boinc boinc       100 Nov 30 17:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 17:07:40] -rwxr-xr-x. 1 boinc boinc      7986 Nov 30 17:03 run_atlas
[2025-11-30 17:07:40] -rw-r--r--. 1 boinc boinc       105 Nov 30 17:03 job.xml
[2025-11-30 17:07:40] -rw-r--r--. 2 boinc boinc 376745402 Nov 30 17:03 EVNT.47528871._000082.pool.root.1
[2025-11-30 17:07:40] -rw-r--r--. 2 boinc boinc     15847 Nov 30 17:03 start_atlas.sh
[2025-11-30 17:07:40] drwxrwx--x. 2 boinc boinc      4096 Nov 30 17:03 shared
[2025-11-30 17:07:40] -rw-r--r--. 2 boinc boinc    590139 Nov 30 17:03 input.tar.gz
[2025-11-30 17:07:40] -rw-r--r--. 1 boinc boinc      6596 Nov 30 17:03 init_data.xml
[2025-11-30 17:07:40] -rw-r--r--. 1 boinc boinc         0 Nov 30 17:03 boinc_lockfile
[2025-11-30 17:07:40] -rw-r--r--. 1 boinc boinc      2879 Nov 30 17:03 pandaJob.out
[2025-11-30 17:07:40] -rw-------. 1 boinc boinc    993253 Nov 30 17:03 agis_schedconf.cvmfs.json
[2025-11-30 17:07:40] -rw-------. 1 boinc boinc   1516240 Nov 30 17:03 agis_ddmendpoints.agis.ALL.json
[2025-11-30 17:07:40] drwx------. 5 boinc boinc      4096 Nov 30 17:03 pilot3
[2025-11-30 17:07:40] -rw-r--r--. 1 boinc boinc       523 Nov 30 17:04 boinc_task_state.xml
[2025-11-30 17:07:40] -rw-------. 1 boinc boinc       969 Nov 30 17:04 memory_monitor_summary.json
[2025-11-30 17:07:40] -rw-------. 1 boinc boinc     49129 Nov 30 17:04 log.47538113._002517.job.log.tgz.1
[2025-11-30 17:07:40] -rw-------. 1 boinc boinc        95 Nov 30 17:06 pilot_heartbeat.json
[2025-11-30 17:07:40] -rw-------. 1 boinc boinc      9883 Nov 30 17:06 heartbeat.json
[2025-11-30 17:07:40] -rw-r--r--. 1 boinc boinc      8192 Nov 30 17:07 boinc_mmap_file
[2025-11-30 17:07:40] -rw-r--r--. 1 boinc boinc        23 Nov 30 17:07 wrapper_checkpoint.txt
[2025-11-30 17:07:40] -rw-------. 1 boinc boinc      4822 Nov 30 17:07 pilotlog.txt
[2025-11-30 17:07:40] -rw-------. 1 boinc boinc     92943 Nov 30 17:07 log.47538113._002517.job.log.1
[2025-11-30 17:07:40] -rw-------. 1 boinc boinc       186 Nov 30 17:07 output.list
[2025-11-30 17:07:40] -rw-r--r--. 1 boinc boinc       620 Nov 30 17:07 runtime_log
[2025-11-30 17:07:40] -rw-------. 1 boinc boinc    163840 Nov 30 17:07 result.tar.gz
[2025-11-30 17:07:40] -rw-r--r--. 1 boinc boinc      8636 Nov 30 17:07 runtime_log.err
[2025-11-30 17:07:40] -rw-------. 1 boinc boinc       643 Nov 30 17:07 FTENDmgKkj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMPPKDmfxQN5n.diag
[2025-11-30 17:07:40] -rw-r--r--. 1 boinc boinc     22366 Nov 30 17:07 stderr.txt
[2025-11-30 17:07:40] No HITS result produced
[2025-11-30 17:07:40]  *** Contents of shared directory: ***
[2025-11-30 17:07:40] total 368672
[2025-11-30 17:07:40] -rw-r--r--. 2 boinc boinc 376745402 Nov 30 17:03 ATLAS.root_0
[2025-11-30 17:07:40] -rw-r--r--. 2 boinc boinc     15847 Nov 30 17:03 start_atlas.sh
[2025-11-30 17:07:40] -rw-r--r--. 2 boinc boinc    590139 Nov 30 17:03 input.tar.gz
[2025-11-30 17:07:40] -rw-------. 1 boinc boinc    163840 Nov 30 17:07 result.tar.gz
17:07:41 (2525162): run_atlas exited; CPU time 49.216717
17:07:41 (2525162): called boinc_finish(0)

</stderr_txt>
]]>

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