Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
02:52:10 (3667276): wrapper (7.7.26015): starting
02:52:10 (3667276): wrapper: running run_atlas (--nthreads 12)
[2025-12-01 02:52:10] Arguments: --nthreads 12
[2025-12-01 02:52:10] Threads: 12
[2025-12-01 02:52:10] Checking for CVMFS
[2025-12-01 02:52:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 02:52:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 02:52:10] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 02:52:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 02:52:10] 2.13.0.0 498242 17321 45056 153501 1 81 74276268 82903041 1302 130560 29 8074080 99.965 763529 319 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-01 02:52:10] CVMFS is ok
[2025-12-01 02:52:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 02:52:10] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-01 02:52:10] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-01 02:52:10] Further information can be found at the LHC@home message board.
[2025-12-01 02:52:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 02:52:10] Checking for apptainer binary...
[2025-12-01 02:52:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 02:52:10] Running /usr/bin/apptainer --version
[2025-12-01 02:52:10] apptainer version 1.4.4
[2025-12-01 02:52:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 02:52:10] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) torr
[2025-12-01 02:52:10] apptainer works
[2025-12-01 02:52:10] Set ATHENA_PROC_NUMBER=12
[2025-12-01 02:52:10] Set ATHENA_CORE_NUMBER=12
[2025-12-01 02:52:10] Starting ATLAS job with PandaID=6905165328
[2025-12-01 02:52:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 05:52:37]  *** The last 200 lines of the pilot log: ***
[2025-12-01 05:52:37] 2025-12-01 05:51:44,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-01 05:52:37] 2025-12-01 05:51:45,841 | INFO     | time since job start (10771s) is within the limit (172800.0s)
[2025-12-01 05:52:37] 2025-12-01 05:51:46,112 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-01 05:52:37] 2025-12-01 05:51:46,113 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3106.8970000000004
[2025-12-01 05:52:37] 2025-12-01 05:51:46,114 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6905165328/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 05:52:37] 2025-12-01 05:51:46,114 | INFO     | extracted standard info from prmon json
[2025-12-01 05:52:37] 2025-12-01 05:51:46,114 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 05:52:37] 2025-12-01 05:51:46,114 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 05:52:37] 2025-12-01 05:51:46,115 | INFO     | fitting pss+swap vs Time
[2025-12-01 05:52:37] 2025-12-01 05:51:46,115 | INFO     | sum of square deviations: 1719427041.0621474
[2025-12-01 05:52:37] 2025-12-01 05:51:46,115 | INFO     | sum of deviations: 61259375858.112976
[2025-12-01 05:52:37] 2025-12-01 05:51:46,115 | INFO     | mean x: 1764562919.2485876
[2025-12-01 05:52:37] 2025-12-01 05:51:46,115 | INFO     | mean y: 4040200.451977401
[2025-12-01 05:52:37] 2025-12-01 05:51:46,115 | INFO     | intersect: -62863426993.01717
[2025-12-01 05:52:37] 2025-12-01 05:51:46,116 | INFO     | chi2: 3.50472568710593
[2025-12-01 05:52:37] 2025-12-01 05:51:46,116 | INFO     | sum of square deviations: 1577800595.744191
[2025-12-01 05:52:37] 2025-12-01 05:51:46,116 | INFO     | sum of deviations: 115281677339.18611
[2025-12-01 05:52:37] 2025-12-01 05:51:46,116 | INFO     | mean x: 1764562766.7558138
[2025-12-01 05:52:37] 2025-12-01 05:51:46,116 | INFO     | mean y: 4097791.8139534886
[2025-12-01 05:52:37] 2025-12-01 05:51:46,116 | INFO     | intersect: -128923319316.89783
[2025-12-01 05:52:37] 2025-12-01 05:51:46,116 | INFO     | chi2: 1.6133214931585667
[2025-12-01 05:52:37] 2025-12-01 05:51:46,116 | INFO     | current chi2=1.6133214931585667 (change=53.967253440288886 %)
[2025-12-01 05:52:37] 2025-12-01 05:51:46,116 | INFO     | sum of square deviations: 1444163685.9281442
[2025-12-01 05:52:37] 2025-12-01 05:51:46,116 | INFO     | sum of deviations: 108973161564.07195
[2025-12-01 05:52:37] 2025-12-01 05:51:46,116 | INFO     | mean x: 1764562614.257485
[2025-12-01 05:52:37] 2025-12-01 05:51:46,116 | INFO     | mean y: 4090590.7425149702
[2025-12-01 05:52:37] 2025-12-01 05:51:46,117 | INFO     | intersect: -133145613093.86435
[2025-12-01 05:52:37] 2025-12-01 05:51:46,117 | INFO     | chi2: 1.613216418288487
[2025-12-01 05:52:37] 2025-12-01 05:51:46,117 | INFO     | current chi2=1.613216418288487 (change=0.006512952968474827 %)
[2025-12-01 05:52:37] 2025-12-01 05:51:46,117 | INFO     | right removable region: 166
[2025-12-01 05:52:37] 2025-12-01 05:51:46,117 | INFO     | sum of square deviations: 1577773755.744191
[2025-12-01 05:52:37] 2025-12-01 05:51:46,117 | INFO     | sum of deviations: 14239183896.209328
[2025-12-01 05:52:37] 2025-12-01 05:51:46,117 | INFO     | mean x: 1764563071.7558138
[2025-12-01 05:52:37] 2025-12-01 05:51:46,117 | INFO     | mean y: 4090192.7906976743
[2025-12-01 05:52:37] 2025-12-01 05:51:46,117 | INFO     | intersect: -15920840732.010914
[2025-12-01 05:52:37] 2025-12-01 05:51:46,117 | INFO     | chi2: 1.9536879407312324
[2025-12-01 05:52:37] 2025-12-01 05:51:46,117 | INFO     | current chi2=1.9536879407312324 (change=44.25561041998371 %)
[2025-12-01 05:52:37] 2025-12-01 05:51:46,117 | INFO     | sum of square deviations: 1444141847.4371293
[2025-12-01 05:52:37] 2025-12-01 05:51:46,117 | INFO     | sum of deviations: 8747824927.886219
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | mean x: 1764563224.251497
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | mean y: 4096437.4550898205
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | intersect: -10684666710.938156
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | chi2: 1.9525910500876886
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | current chi2=1.9525910500876886 (change=0.05614461862999693 %)
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | left removable region: 20
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | sum of square deviations: 964979615.1232873
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | sum of deviations: 44072849157.84932
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | mean x: 1764563193.7534246
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | mean y: 4169541.301369863
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | intersect: -80587509545.98338
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | chi2: 0.008693297742084232
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | current memory leak: 45.67 B/s (using 146 data points, chi2=0.01)
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | could have reported an average CPU frequency of 3450 MHz (9 samples)
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | ..............................
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | . Timing measurements:
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | . get job = 0 s
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | . initial setup = 1 s
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | . payload setup = 2 s
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | . stage-in = 0 s
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | . payload execution = 10748 s
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | . stage-out = 0 s
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | . log creation = 0 s
[2025-12-01 05:52:37] 2025-12-01 05:51:46,118 | INFO     | ..............................
[2025-12-01 05:52:37] 2025-12-01 05:51:46,143 | INFO     | 
[2025-12-01 05:52:37] 2025-12-01 05:51:46,143 | INFO     | job summary report
[2025-12-01 05:52:37] 2025-12-01 05:51:46,143 | INFO     | --------------------------------------------------
[2025-12-01 05:52:37] 2025-12-01 05:51:46,143 | INFO     | PanDA job id: 6905165328
[2025-12-01 05:52:37] 2025-12-01 05:51:46,144 | INFO     | task id: 47530725
[2025-12-01 05:52:37] 2025-12-01 05:51:46,144 | INFO     | errors: (none)
[2025-12-01 05:52:37] 2025-12-01 05:51:46,144 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 05:52:37] 2025-12-01 05:51:46,144 | INFO     | pilot state: finished 
[2025-12-01 05:52:37] 2025-12-01 05:51:46,144 | INFO     | transexitcode: 0
[2025-12-01 05:52:37] 2025-12-01 05:51:46,144 | INFO     | exeerrorcode: 0
[2025-12-01 05:52:37] 2025-12-01 05:51:46,144 | INFO     | exeerrordiag: 
[2025-12-01 05:52:37] 2025-12-01 05:51:46,144 | INFO     | exitcode: 0
[2025-12-01 05:52:37] 2025-12-01 05:51:46,144 | INFO     | exitmsg: OK
[2025-12-01 05:52:37] 2025-12-01 05:51:46,144 | INFO     | cpuconsumptiontime: 106041 s
[2025-12-01 05:52:37] 2025-12-01 05:51:46,144 | INFO     | nevents: 1000
[2025-12-01 05:52:37] 2025-12-01 05:51:46,144 | INFO     | neventsw: 0
[2025-12-01 05:52:37] 2025-12-01 05:51:46,144 | INFO     | pid: 3678219
[2025-12-01 05:52:37] 2025-12-01 05:51:46,144 | INFO     | pgrp: 3678219
[2025-12-01 05:52:37] 2025-12-01 05:51:46,144 | INFO     | corecount: 12
[2025-12-01 05:52:37] 2025-12-01 05:51:46,144 | INFO     | event service: False
[2025-12-01 05:52:37] 2025-12-01 05:51:46,144 | INFO     | sizes: {0: 2284402, 1: 2284664, 11: 2284692, 10754: 2333814, 10755: 2342822, 10757: 2342878, 10760: 2343316}
[2025-12-01 05:52:37] 2025-12-01 05:51:46,144 | INFO     | --------------------------------------------------
[2025-12-01 05:52:37] 2025-12-01 05:51:46,144 | INFO     | 
[2025-12-01 05:52:37] 2025-12-01 05:51:46,144 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-12-01 05:52:37] 2025-12-01 05:51:46,151 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 05:52:37] 2025-12-01 05:51:46,151 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 05:52:37] 2025-12-01 05:51:46,151 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 05:52:37] 2025-12-01 05:51:46,151 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 05:52:37] 2025-12-01 05:51:46,151 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 05:52:37] 2025-12-01 05:51:46,151 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 05:52:37] 2025-12-01 05:51:46,151 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 05:52:37] 2025-12-01 05:51:46,151 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 05:52:37] 2025-12-01 05:51:46,151 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 05:52:37] 2025-12-01 05:51:46,151 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 05:52:37] 2025-12-01 05:51:46,151 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 05:52:37] 2025-12-01 05:51:46,151 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 05:52:37] 2025-12-01 05:51:46,151 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 05:52:37] 2025-12-01 05:51:46,151 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 05:52:37] 2025-12-01 05:51:46,151 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 05:52:37] 2025-12-01 05:51:46,151 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 05:52:37] 2025-12-01 05:51:46,151 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 05:52:37] 2025-12-01 05:51:46,151 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 05:52:37] 2025-12-01 05:51:46,151 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 05:52:37] 2025-12-01 05:51:46,151 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 05:52:37] 2025-12-01 05:51:46,151 | INFO     | job 6905165328 has completed (purged errors)
[2025-12-01 05:52:37] 2025-12-01 05:51:46,151 | INFO     | overall cleanup function is called
[2025-12-01 05:52:37] 2025-12-01 05:51:47,160 | INFO     | --- collectZombieJob: --- 10, [3678219]
[2025-12-01 05:52:37] 2025-12-01 05:51:47,160 | INFO     | zombie collector waiting for pid 3678219
[2025-12-01 05:52:37] 2025-12-01 05:51:47,160 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 05:52:37] 2025-12-01 05:51:47,160 | INFO     | collected zombie processes
[2025-12-01 05:52:37] 2025-12-01 05:51:47,160 | INFO     | will attempt to kill all subprocesses of pid=3678219
[2025-12-01 05:52:37] 2025-12-01 05:51:47,187 | INFO     | process IDs to be killed: [3678219] (in reverse order)
[2025-12-01 05:52:37] 2025-12-01 05:51:47,202 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 05:52:37] 2025-12-01 05:51:47,202 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 05:52:37] 2025-12-01 05:51:47,203 | INFO     | did not find any defunct processes belonging to 3678219
[2025-12-01 05:52:37] 2025-12-01 05:51:47,204 | INFO     | did not find any defunct processes belonging to 3678219
[2025-12-01 05:52:37] 2025-12-01 05:51:47,205 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 05:52:37] 2025-12-01 05:51:47,205 | INFO     | ready for new job
[2025-12-01 05:52:37] 2025-12-01 05:51:47,205 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 05:52:37] 2025-12-01 05:51:47,205 | INFO     | ***************************************
[2025-12-01 05:52:37] 2025-12-01 05:51:47,205 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 05:52:37] 2025-12-01 05:51:47,205 | INFO     | ***************************************
[2025-12-01 05:52:37] 2025-12-01 05:51:47,205 | INFO     | 
[2025-12-01 05:52:37] 2025-12-01 05:51:47,206 | INFO     | architecture information:
[2025-12-01 05:52:37] 2025-12-01 05:51:47,206 | INFO     | executing command: cat /etc/os-release
[2025-12-01 05:52:37] 2025-12-01 05:51:47,219 | INFO     | cat /etc/os-release:
[2025-12-01 05:52:37] NAME="CentOS Linux"
[2025-12-01 05:52:37] VERSION="7 (Core)"
[2025-12-01 05:52:37] ID="centos"
[2025-12-01 05:52:37] ID_LIKE="rhel fedora"
[2025-12-01 05:52:37] VERSION_ID="7"
[2025-12-01 05:52:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 05:52:37] ANSI_COLOR="0;31"
[2025-12-01 05:52:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 05:52:37] HOME_URL="https://www.centos.org/"
[2025-12-01 05:52:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 05:52:37] 
[2025-12-01 05:52:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 05:52:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 05:52:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 05:52:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 05:52:37] 
[2025-12-01 05:52:37] 2025-12-01 05:51:47,219 | INFO     | ***************************************
[2025-12-01 05:52:37] 2025-12-01 05:51:47,721 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-12-01 05:52:37] 2025-12-01 05:51:47,726 | INFO     | sufficient remaining disk space (305829773312 B)
[2025-12-01 05:52:37] 2025-12-01 05:51:47,727 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 05:52:37] 2025-12-01 05:51:47,727 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 05:52:37] 2025-12-01 05:51:47,727 | INFO     | update_server=False
[2025-12-01 05:52:37] 2025-12-01 05:51:47,727 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 05:52:37] 2025-12-01 05:51:47,727 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 05:52:37] 2025-12-01 05:51:47,727 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 05:52:37] 2025-12-01 05:51:47,727 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-01 05:52:37] 2025-12-01 05:51:47,727 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 05:52:37] 2025-12-01 05:51:47,727 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 05:52:37] 2025-12-01 05:51:47,727 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 05:52:37] 2025-12-01 05:51:48,126 | INFO     | all payload control threads have been joined
[2025-12-01 05:52:37] 2025-12-01 05:51:48,138 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 05:52:37] 2025-12-01 05:51:48,138 | INFO     | aborting loop
[2025-12-01 05:52:37] 2025-12-01 05:51:48,314 | INFO     | all job control threads have been joined
[2025-12-01 05:52:37] 2025-12-01 05:51:48,508 | INFO     | all data control threads have been joined
[2025-12-01 05:52:37] 2025-12-01 05:51:48,727 | INFO     | [job] queue monitor thread has finished
[2025-12-01 05:52:37] 2025-12-01 05:51:48,732 | INFO     | [job] retrieve thread has finished
[2025-12-01 05:52:37] 2025-12-01 05:51:49,079 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 05:52:37] 2025-12-01 05:51:49,131 | INFO     | [payload] control thread has finished
[2025-12-01 05:52:37] 2025-12-01 05:51:49,143 | INFO     | [job] job monitor thread has finished
[2025-12-01 05:52:37] 2025-12-01 05:51:49,236 | INFO     | [payload] failed_post thread has finished
[2025-12-01 05:52:37] 2025-12-01 05:51:49,283 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 05:52:37] 2025-12-01 05:51:49,319 | INFO     | [job] control thread has finished
[2025-12-01 05:52:37] 2025-12-01 05:51:49,513 | INFO     | [data] control thread has finished
[2025-12-01 05:52:37] 2025-12-01 05:51:49,709 | INFO     | [payload] validate_post thread has finished
[2025-12-01 05:52:37] 2025-12-01 05:51:49,732 | INFO     | [data] copytool_out thread has finished
[2025-12-01 05:52:37] 2025-12-01 05:51:49,736 | INFO     | [data] copytool_in thread has finished
[2025-12-01 05:52:37] 2025-12-01 05:51:49,807 | INFO     | [job] validate thread has finished
[2025-12-01 05:52:37] 2025-12-01 05:51:49,897 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 05:52:37] 2025-12-01 05:51:50,036 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 05:52:37] 2025-12-01 05:51:53,288 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 05:52:37] 2025-12-01 05:51:58,395 | INFO     | job.realtimelogging is not enabled
[2025-12-01 05:52:37] 2025-12-01 05:51:59,400 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 05:52:37] 2025-12-01 05:52:13,166 [wrapper] supervise_pilot (15 min periods counter: 13)
[2025-12-01 05:52:37] 2025-12-01 05:52:31,900 | INFO     | [monitor] cgroup control has ended
[2025-12-01 05:52:37] 2025-12-01 05:52:32,726 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133609918207808)>', '<ExcThread(monitor, started 133609419683584)>']
[2025-12-01 05:52:37] 2025-12-01 05:52:32,910 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 05:52:37] 2025-12-01 05:52:32,910 | INFO     | [monitor] control thread has ended
[2025-12-01 05:52:37] 2025-12-01 05:52:37,749 | INFO     | all workflow threads have been joined
[2025-12-01 05:52:37] 2025-12-01 05:52:37,749 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 05:52:37] 2025-12-01 05:52:37,749 | INFO     | traces error code: 0
[2025-12-01 05:52:37] 2025-12-01 05:52:37,749 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 05:52:37] 2025-12-01 05:52:37,798 [wrapper] ==== pilot stdout END ====
[2025-12-01 05:52:37] 2025-12-01 05:52:37,799 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 05:52:37] 2025-12-01 05:52:37,800 [wrapper] pilotpid: 3671008
[2025-12-01 05:52:37] 2025-12-01 05:52:37,801 [wrapper] Pilot exit status: 0
[2025-12-01 05:52:37] 2025-12-01 05:52:37,805 [wrapper] pandaids: 6905165328
[2025-12-01 05:52:37] 2025-12-01 05:52:37,814 [wrapper] cleanup supervisor_pilot 3757001 3671009
[2025-12-01 05:52:37] 2025-12-01 05:52:37,814 [wrapper] Test setup, not cleaning
[2025-12-01 05:52:37] 2025-12-01 05:52:37,815 [wrapper] apfmon messages muted
[2025-12-01 05:52:37] 2025-12-01 05:52:37,816 [wrapper] ==== wrapper stdout END ====
[2025-12-01 05:52:37] 2025-12-01 05:52:37,817 [wrapper] ==== wrapper stderr END ====
[2025-12-01 05:52:37]  *** Error codes and diagnostics ***
[2025-12-01 05:52:37]     "exeErrorCode": 0,
[2025-12-01 05:52:37]     "exeErrorDiag": "",
[2025-12-01 05:52:37]     "pilotErrorCode": 0,
[2025-12-01 05:52:37]     "pilotErrorDiag": "",
[2025-12-01 05:52:37]  *** Listing of results directory ***
[2025-12-01 05:52:37] total 1073340
[2025-12-01 05:52:37] -rw-r--r-- 1 boinc boinc    576529 Nov 30 00:16 pilot3.tar.gz
[2025-12-01 05:52:37] -rwx------ 1 boinc boinc     36292 Nov 30 00:18 runpilot2-wrapper.sh
[2025-12-01 05:52:37] -rw-r--r-- 1 boinc boinc      5112 Nov 30 00:18 queuedata.json
[2025-12-01 05:52:37] -rw-r--r-- 1 boinc boinc       100 Dec  1 02:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 05:52:37] -rwxr-xr-x 1 boinc boinc      7986 Dec  1 02:52 run_atlas
[2025-12-01 05:52:37] -rw-r--r-- 1 boinc boinc       105 Dec  1 02:52 job.xml
[2025-12-01 05:52:37] -rw-r--r-- 1 boinc boinc      9907 Dec  1 02:52 init_data.xml
[2025-12-01 05:52:37] -rw-r--r-- 2 boinc boinc 378119328 Dec  1 02:52 EVNT.47530720._000002.pool.root.1
[2025-12-01 05:52:37] -rw-r--r-- 2 boinc boinc     15847 Dec  1 02:52 start_atlas.sh
[2025-12-01 05:52:37] drwxrwx--x 2 boinc boinc      4096 Dec  1 02:52 shared
[2025-12-01 05:52:37] -rw-r--r-- 2 boinc boinc    590129 Dec  1 02:52 input.tar.gz
[2025-12-01 05:52:37] -rw-r--r-- 1 boinc boinc         0 Dec  1 02:52 boinc_lockfile
[2025-12-01 05:52:37] -rw-r--r-- 1 boinc boinc      2876 Dec  1 02:52 pandaJob.out
[2025-12-01 05:52:37] -rw------- 1 boinc boinc    993253 Dec  1 02:52 agis_schedconf.cvmfs.json
[2025-12-01 05:52:37] -rw------- 1 boinc boinc   1516240 Dec  1 02:52 agis_ddmendpoints.agis.ALL.json
[2025-12-01 05:52:37] drwx------ 5 boinc boinc      4096 Dec  1 02:52 pilot3
[2025-12-01 05:52:37] -rw-r--r-- 1 boinc boinc       532 Dec  1 05:47 boinc_task_state.xml
[2025-12-01 05:52:37] -rw------- 1 boinc boinc 709865301 Dec  1 05:51 HITS.47530725._001459.pool.root.1
[2025-12-01 05:52:37] -rw------- 1 boinc boinc      1056 Dec  1 05:51 memory_monitor_summary.json
[2025-12-01 05:52:37] -rw------- 1 boinc boinc   2027598 Dec  1 05:51 log.47530725._001459.job.log.tgz.1
[2025-12-01 05:52:37] -rw------- 1 boinc boinc     27934 Dec  1 05:51 heartbeat.json
[2025-12-01 05:52:37] -rw------- 1 boinc boinc        95 Dec  1 05:51 pilot_heartbeat.json
[2025-12-01 05:52:37] -rw-r--r-- 1 boinc boinc      8192 Dec  1 05:52 boinc_mmap_file
[2025-12-01 05:52:37] -rw-r--r-- 1 boinc boinc        29 Dec  1 05:52 wrapper_checkpoint.txt
[2025-12-01 05:52:37] -rw------- 1 boinc boinc      4632 Dec  1 05:52 pilotlog.txt
[2025-12-01 05:52:37] -rw------- 1 boinc boinc   1551967 Dec  1 05:52 log.47530725._001459.job.log.1
[2025-12-01 05:52:37] -rw------- 1 boinc boinc       353 Dec  1 05:52 output.list
[2025-12-01 05:52:37] -rw-r--r-- 1 boinc boinc       620 Dec  1 05:52 runtime_log
[2025-12-01 05:52:37] -rw------- 1 boinc boinc   3614720 Dec  1 05:52 result.tar.gz
[2025-12-01 05:52:37] -rw-r--r-- 1 boinc boinc      9048 Dec  1 05:52 runtime_log.err
[2025-12-01 05:52:37] -rw------- 1 boinc boinc       660 Dec  1 05:52 OovNDmlJkj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmYyLKDm2gMhXn.diag
[2025-12-01 05:52:37] -rw-r--r-- 1 boinc boinc     21465 Dec  1 05:52 stderr.txt
[2025-12-01 05:52:37] HITS file was successfully produced:
[2025-12-01 05:52:37] -rw------- 1 boinc boinc 709865301 Dec  1 05:51 shared/HITS.pool.root.1
[2025-12-01 05:52:37]  *** Contents of shared directory: ***
[2025-12-01 05:52:37] total 1066624
[2025-12-01 05:52:37] -rw-r--r-- 2 boinc boinc 378119328 Dec  1 02:52 ATLAS.root_0
[2025-12-01 05:52:37] -rw-r--r-- 2 boinc boinc     15847 Dec  1 02:52 start_atlas.sh
[2025-12-01 05:52:37] -rw-r--r-- 2 boinc boinc    590129 Dec  1 02:52 input.tar.gz
[2025-12-01 05:52:37] -rw------- 1 boinc boinc 709865301 Dec  1 05:51 HITS.pool.root.1
[2025-12-01 05:52:37] -rw------- 1 boinc boinc   3614720 Dec  1 05:52 result.tar.gz
05:52:39 (3667276): run_atlas exited; CPU time 105762.817249
05:52:39 (3667276): called boinc_finish(0)

</stderr_txt>
]]>

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