Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:24:20 (1649395): wrapper (7.7.26015): starting
15:24:20 (1649395): wrapper: running run_atlas (--nthreads 12)
[2025-11-30 15:24:20] Arguments: --nthreads 12
[2025-11-30 15:24:20] Threads: 12
[2025-11-30 15:24:20] Checking for CVMFS
[2025-11-30 15:24:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 15:24:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 15:24:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 15:24:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 15:24:20] 2.11.5.0 1413531 44 60584 153497 3 75 40666057 45568000 0 130560 0 728353 99.975 68312 32937 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-30 15:24:20] CVMFS is ok
[2025-11-30 15:24:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 15:24:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 15:24:20] Further information can be found at the LHC@home message board.
[2025-11-30 15:24:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 15:24:20] Checking for apptainer binary...
[2025-11-30 15:24:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 15:24:20] Running /usr/bin/apptainer --version
[2025-11-30 15:24:20] apptainer version 1.4.1-1.el9
[2025-11-30 15:24:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 15:24:21] wns0088.triumf.lcg
[2025-11-30 15:24:21] apptainer works
[2025-11-30 15:24:21] Set ATHENA_PROC_NUMBER=12
[2025-11-30 15:24:21] Set ATHENA_CORE_NUMBER=12
[2025-11-30 15:24:21] Starting ATLAS job with PandaID=6905025944
[2025-11-30 15:24:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 15:27:37]  *** The last 200 lines of the pilot log: ***
[2025-11-30 15:27:37] 2025-11-30 23:27:05,289 | INFO     | will not add max space = 0 B to job metrics
[2025-11-30 15:27:37] 2025-11-30 23:27:05,289 | WARNING  | wrong length of table data, x=[1764545089.0], y=[1757.0] (must be same and length>=4)
[2025-11-30 15:27:37] 2025-11-30 23:27:05,289 | INFO     | could have reported an average CPU frequency of 3235 MHz (4 samples)
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | ..............................
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . Timing measurements:
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . get job = 0 s
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . initial setup = 2 s
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . payload setup = 3 s
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . stage-in = 0 s
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . payload execution = 14 s
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . stage-out = 0 s
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . log creation = 0 s
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | ..............................
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905025944/pilotlog.txt
[2025-11-30 15:27:37] 2025-11-30 23:27:05,299 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-30 15:27:37] - Log from pilotlog.txt -
[2025-11-30 15:27:37] 2025-11-30 23:27:05,289 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 15:27:37] 2025-11-30 23:27:05,289 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 15:27:37] 2025-11-30 23:27:05,289 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-30 15:27:37] 2025-11-30 23:27:05,289 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-30 15:27:37] 2025-11-30 23:27:05,289 | WARNING  | found no stored workdir sizes
[2025-11-30 15:27:37] 2025-11-30 23:27:05,289 | INFO     | will not add max space = 0 B to job metrics
[2025-11-30 15:27:37] 2025-11-30 23:27:05,289 | WARNING  | wrong length of table data, x=[1764545089.0], y=[1757.0] (must be same and length>=4)
[2025-11-30 15:27:37] 2025-11-30 23:27:05,289 | INFO     | could have reported an average CPU frequency of 3235 MHz (4 samples)
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | ..............................
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . Timing measurements:
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . get job = 0 s
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . initial setup = 2 s
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . payload setup = 3 s
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . stage-in = 0 s
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . payload execution = 14 s
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . stage-out = 0 s
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . log creation = 0 s
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | ..............................
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905025944/pilotlog.txt
[2025-11-30 15:27:37] 2025-11-30 23:27:05,299 | WARNING  | 
[2025-11-30 15:27:37] [begin log extracts]
[2025-11-30 15:27:37] - Log from pilotlog.txt -
[2025-11-30 15:27:37] 2025-11-30 23:27:05,289 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 15:27:37] 2025-11-30 23:27:05,289 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 15:27:37] 2025-11-30 23:27:05,289 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-30 15:27:37] 2025-11-30 23:27:05,289 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-30 15:27:37] 2025-11-30 23:27:05,289 | WARNING  | found no stored workdir sizes
[2025-11-30 15:27:37] 2025-11-30 23:27:05,289 | INFO     | will not add max space = 0 B to job metrics
[2025-11-30 15:27:37] 2025-11-30 23:27:05,289 | WARNING  | wrong length of table data, x=[1764545089.0], y=[1757.0] (must be same and length>=4)
[2025-11-30 15:27:37] 2025-11-30 23:27:05,289 | INFO     | could have reported an average CPU frequency of 3235 MHz (4 samples)
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | ..............................
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . Timing measurements:
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . get job = 0 s
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . initial setup = 2 s
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . payload setup = 3 s
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . stage-in = 0 s
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . payload execution = 14 s
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . stage-out = 0 s
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | . log creation = 0 s
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | ..............................
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-30 15:27:37] 2025-11-30 23:27:05,290 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6905025944/pilotlog.txt
[2025-11-30 15:27:37] [end log extracts]
[2025-11-30 15:27:37] 2025-11-30 23:27:05,299 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-11-30 15:27:37] 2025-11-30 23:27:05,300 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-30 15:27:37] 2025-11-30 23:27:05,350 | INFO     | 
[2025-11-30 15:27:37] 2025-11-30 23:27:05,350 | INFO     | job summary report
[2025-11-30 15:27:37] 2025-11-30 23:27:05,350 | INFO     | --------------------------------------------------
[2025-11-30 15:27:37] 2025-11-30 23:27:05,350 | INFO     | PanDA job id: 6905025944
[2025-11-30 15:27:37] 2025-11-30 23:27:05,350 | INFO     | task id: 47523969
[2025-11-30 15:27:37] 2025-11-30 23:27:05,350 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-30 15:24:55,408 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-30 15:27:37] 2025-11-30 23:27:05,351 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 15:27:37] 2025-11-30 23:27:05,351 | INFO     | pilot state: failed 
[2025-11-30 15:27:37] 2025-11-30 23:27:05,351 | INFO     | transexitcode: 65
[2025-11-30 15:27:37] 2025-11-30 23:27:05,351 | INFO     | exeerrorcode: 65
[2025-11-30 15:27:37] 2025-11-30 23:27:05,351 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-11-30 15:27:37] 2025-11-30 23:27:05,351 | INFO     | exitcode: 65
[2025-11-30 15:27:37] 2025-11-30 23:27:05,351 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-11-30 15:27:37] 2025-11-30 23:27:05,351 | INFO     | cpuconsumptiontime: 17 s
[2025-11-30 15:27:37] 2025-11-30 23:27:05,351 | INFO     | nevents: 0
[2025-11-30 15:27:37] 2025-11-30 23:27:05,351 | INFO     | neventsw: 0
[2025-11-30 15:27:37] 2025-11-30 23:27:05,351 | INFO     | pid: 1659630
[2025-11-30 15:27:37] 2025-11-30 23:27:05,351 | INFO     | pgrp: 1659630
[2025-11-30 15:27:37] 2025-11-30 23:27:05,351 | INFO     | corecount: 12
[2025-11-30 15:27:37] 2025-11-30 23:27:05,351 | INFO     | event service: False
[2025-11-30 15:27:37] 2025-11-30 23:27:05,351 | INFO     | sizes: {0: 2283715, 1: 2283914, 3: 2284176, 11: 2284204, 21: 2307523, 22: 2311815, 24: 2311971, 143: 2312137}
[2025-11-30 15:27:37] 2025-11-30 23:27:05,351 | INFO     | --------------------------------------------------
[2025-11-30 15:27:37] 2025-11-30 23:27:05,351 | INFO     | 
[2025-11-30 15:27:37] 2025-11-30 23:27:05,351 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-30 15:27:37] 2025-11-30 23:27:05,365 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 15:27:37] 2025-11-30 23:27:05,365 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 15:27:37] 2025-11-30 23:27:05,365 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 15:27:37] 2025-11-30 23:27:05,365 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 15:27:37] 2025-11-30 23:27:05,365 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 15:27:37] 2025-11-30 23:27:05,365 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 15:27:37] 2025-11-30 23:27:05,365 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 15:27:37] 2025-11-30 23:27:05,365 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 15:27:37] 2025-11-30 23:27:05,365 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 15:27:37] 2025-11-30 23:27:05,365 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 15:27:37] 2025-11-30 23:27:05,365 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 15:27:37] 2025-11-30 23:27:05,365 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 15:27:37] 2025-11-30 23:27:05,365 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 15:27:37] 2025-11-30 23:27:05,365 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 15:27:37] 2025-11-30 23:27:05,365 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 15:27:37] 2025-11-30 23:27:05,365 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 15:27:37] 2025-11-30 23:27:05,366 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 15:27:37] 2025-11-30 23:27:05,366 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 15:27:37] 2025-11-30 23:27:05,366 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 15:27:37] 2025-11-30 23:27:05,366 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 15:27:37] 2025-11-30 23:27:05,366 | INFO     | job 6905025944 has completed (purged errors)
[2025-11-30 15:27:37] 2025-11-30 23:27:05,366 | INFO     | overall cleanup function is called
[2025-11-30 15:27:37] 2025-11-30 23:27:06,372 | INFO     | --- collectZombieJob: --- 10, [1659630]
[2025-11-30 15:27:37] 2025-11-30 23:27:06,372 | INFO     | zombie collector waiting for pid 1659630
[2025-11-30 15:27:37] 2025-11-30 23:27:06,372 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 15:27:37] 2025-11-30 23:27:06,372 | INFO     | collected zombie processes
[2025-11-30 15:27:37] 2025-11-30 23:27:06,372 | INFO     | will attempt to kill all subprocesses of pid=1659630
[2025-11-30 15:27:37] 2025-11-30 23:27:06,457 | INFO     | process IDs to be killed: [1659630] (in reverse order)
[2025-11-30 15:27:37] 2025-11-30 23:27:06,488 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 15:27:37] 2025-11-30 23:27:06,488 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 15:27:37] 2025-11-30 23:27:06,491 | INFO     | did not find any defunct processes belonging to 1659630
[2025-11-30 15:27:37] 2025-11-30 23:27:06,494 | INFO     | did not find any defunct processes belonging to 1659630
[2025-11-30 15:27:37] 2025-11-30 23:27:06,494 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 15:27:37] 2025-11-30 23:27:06,494 | INFO     | ready for new job
[2025-11-30 15:27:37] 2025-11-30 23:27:06,495 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 15:27:37] 2025-11-30 23:27:06,495 | INFO     | ***************************************
[2025-11-30 15:27:37] 2025-11-30 23:27:06,495 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 15:27:37] 2025-11-30 23:27:06,495 | INFO     | ***************************************
[2025-11-30 15:27:37] 2025-11-30 23:27:06,495 | INFO     | 
[2025-11-30 15:27:37] 2025-11-30 23:27:06,497 | INFO     | architecture information:
[2025-11-30 15:27:37] 2025-11-30 23:27:06,498 | INFO     | executing command: cat /etc/os-release
[2025-11-30 15:27:37] 2025-11-30 23:27:06,504 | INFO     | cat /etc/os-release:
[2025-11-30 15:27:37] NAME="CentOS Linux"
[2025-11-30 15:27:37] VERSION="7 (Core)"
[2025-11-30 15:27:37] ID="centos"
[2025-11-30 15:27:37] ID_LIKE="rhel fedora"
[2025-11-30 15:27:37] VERSION_ID="7"
[2025-11-30 15:27:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 15:27:37] ANSI_COLOR="0;31"
[2025-11-30 15:27:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 15:27:37] HOME_URL="https://www.centos.org/"
[2025-11-30 15:27:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 15:27:37] 
[2025-11-30 15:27:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 15:27:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 15:27:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 15:27:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 15:27:37] 
[2025-11-30 15:27:37] 2025-11-30 23:27:06,504 | INFO     | ***************************************
[2025-11-30 15:27:37] 2025-11-30 23:27:07,007 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-30 15:27:37] 2025-11-30 23:27:07,016 | INFO     | sufficient remaining disk space (2242670231552 B)
[2025-11-30 15:27:37] 2025-11-30 23:27:07,016 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 15:27:37] 2025-11-30 23:27:07,016 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 15:27:37] 2025-11-30 23:27:07,016 | INFO     | update_server=False
[2025-11-30 15:27:37] 2025-11-30 23:27:07,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 15:27:37] 2025-11-30 23:27:07,017 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 15:27:37] 2025-11-30 23:27:07,372 | INFO     | all payload control threads have been joined
[2025-11-30 15:27:37] 2025-11-30 23:27:07,408 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-30 15:27:37] 2025-11-30 23:27:07,408 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-30 15:27:37] 2025-11-30 23:27:07,408 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 15:27:37] 2025-11-30 23:27:07,408 | INFO     | will abort loop
[2025-11-30 15:27:37] 2025-11-30 23:27:07,610 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 15:27:37] 2025-11-30 23:27:07,892 | INFO     | all data control threads have been joined
[2025-11-30 15:27:37] 2025-11-30 23:27:08,022 | INFO     | [job] retrieve thread has finished
[2025-11-30 15:27:37] 2025-11-30 23:27:08,022 | INFO     | [job] queue monitor thread has finished
[2025-11-30 15:27:37] 2025-11-30 23:27:08,200 | INFO     | all job control threads have been joined
[2025-11-30 15:27:37] 2025-11-30 23:27:08,378 | INFO     | [payload] control thread has finished
[2025-11-30 15:27:37] 2025-11-30 23:27:08,414 | INFO     | [job] job monitor thread has finished
[2025-11-30 15:27:37] 2025-11-30 23:27:08,489 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 15:27:37] 2025-11-30 23:27:08,495 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 15:27:37] 2025-11-30 23:27:08,701 | INFO     | [job] validate thread has finished
[2025-11-30 15:27:37] 2025-11-30 23:27:08,777 | INFO     | [data] copytool_in thread has finished
[2025-11-30 15:27:37] 2025-11-30 23:27:08,825 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 15:27:37] 2025-11-30 23:27:08,864 | INFO     | [payload] failed_post thread has finished
[2025-11-30 15:27:37] 2025-11-30 23:27:08,898 | INFO     | [data] control thread has finished
[2025-11-30 15:27:37] 2025-11-30 23:27:08,907 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 15:27:37] 2025-11-30 23:27:09,071 | INFO     | [payload] validate_post thread has finished
[2025-11-30 15:27:37] 2025-11-30 23:27:09,205 | INFO     | [job] control thread has finished
[2025-11-30 15:27:37] 2025-11-30 23:27:09,405 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 15:27:37] 2025-11-30 23:27:09,615 | INFO     | [data] copytool_out thread has finished
[2025-11-30 15:27:37] 2025-11-30 23:27:13,410 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 15:27:37] 2025-11-30 23:27:27,978 | INFO     | [monitor] cgroup control has ended
[2025-11-30 15:27:37] 2025-11-30 23:27:29,629 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140475901269824)>', '<ExcThread(monitor, started 140475092694784)>']
[2025-11-30 15:27:37] 2025-11-30 23:27:34,654 | INFO     | all workflow threads have been joined
[2025-11-30 15:27:37] 2025-11-30 23:27:34,654 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 15:27:37] 2025-11-30 23:27:34,655 | INFO     | traces error code: 0
[2025-11-30 15:27:37] 2025-11-30 23:27:34,655 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 15:27:37] 2025-11-30 23:27:37,115 | INFO     | PID=1653085 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-30 15:27:37] 2025-11-30 23:27:37,116 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 15:27:37] 2025-11-30 23:27:37,116 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 15:27:37] 2025-11-30 23:27:37,116 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 15:27:37] 2025-11-30 23:27:37,116 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 15:27:37] 2025-11-30 23:27:37,116 | INFO     | [monitor] control thread has ended
[2025-11-30 15:27:37] 2025-11-30 23:27:37,179 [wrapper] ==== pilot stdout END ====
[2025-11-30 15:27:37] 2025-11-30 23:27:37,180 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 15:27:37] 2025-11-30 23:27:37,182 [wrapper] pilotpid: 1653085
[2025-11-30 15:27:37] 2025-11-30 23:27:37,183 [wrapper] Pilot exit status: 0
[2025-11-30 15:27:37] 2025-11-30 23:27:37,189 [wrapper] pandaids: 6905025944
[2025-11-30 15:27:37] 2025-11-30 23:27:37,211 [wrapper] cleanup supervisor_pilot 1653091 1653086
[2025-11-30 15:27:37] 2025-11-30 23:27:37,213 [wrapper] Test setup, not cleaning
[2025-11-30 15:27:37] 2025-11-30 23:27:37,215 [wrapper] apfmon messages muted
[2025-11-30 15:27:37] 2025-11-30 23:27:37,216 [wrapper] ==== wrapper stdout END ====
[2025-11-30 15:27:37] 2025-11-30 23:27:37,218 [wrapper] ==== wrapper stderr END ====
[2025-11-30 15:27:37]  *** Error codes and diagnostics ***
[2025-11-30 15:27:37]     "exeErrorCode": 65,
[2025-11-30 15:27:37]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-11-30 15:27:37]     "pilotErrorCode": 1305,
[2025-11-30 15:27:37]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-11-30 15:27:37]  *** Listing of results directory ***
[2025-11-30 15:27:37] total 290360
[2025-11-30 15:27:37] -rw-r--r--. 1 boinc boinc    576529 Nov 29 16:16 pilot3.tar.gz
[2025-11-30 15:27:37] -rw-r--r--. 1 boinc boinc      5112 Nov 29 16:17 queuedata.json
[2025-11-30 15:27:37] -rwx------. 1 boinc boinc     36292 Nov 29 16:17 runpilot2-wrapper.sh
[2025-11-30 15:27:37] -rw-r--r--. 1 boinc boinc       100 Nov 30 15:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 15:27:37] -rwxr-xr-x. 1 boinc boinc      7986 Nov 30 15:24 run_atlas
[2025-11-30 15:27:37] -rw-r--r--. 1 boinc boinc       105 Nov 30 15:24 job.xml
[2025-11-30 15:27:37] -rw-r--r--. 2 boinc boinc 293214244 Nov 30 15:24 EVNT.47523965._000006.pool.root.1
[2025-11-30 15:27:37] -rw-r--r--. 2 boinc boinc     15847 Nov 30 15:24 start_atlas.sh
[2025-11-30 15:27:37] drwxrwx--x. 2 boinc boinc      4096 Nov 30 15:24 shared
[2025-11-30 15:27:37] -rw-r--r--. 2 boinc boinc    589950 Nov 30 15:24 input.tar.gz
[2025-11-30 15:27:37] -rw-r--r--. 1 boinc boinc      6597 Nov 30 15:24 init_data.xml
[2025-11-30 15:27:37] -rw-r--r--. 1 boinc boinc         0 Nov 30 15:24 boinc_lockfile
[2025-11-30 15:27:37] -rw-r--r--. 1 boinc boinc      2603 Nov 30 15:24 pandaJob.out
[2025-11-30 15:27:37] -rw-------. 1 boinc boinc    993245 Nov 30 15:24 agis_schedconf.cvmfs.json
[2025-11-30 15:27:37] -rw-------. 1 boinc boinc   1516240 Nov 30 15:24 agis_ddmendpoints.agis.ALL.json
[2025-11-30 15:27:37] drwx------. 5 boinc boinc      4096 Nov 30 15:24 pilot3
[2025-11-30 15:27:37] -rw-r--r--. 1 boinc boinc       523 Nov 30 15:24 boinc_task_state.xml
[2025-11-30 15:27:37] -rw-------. 1 boinc boinc       988 Nov 30 15:24 memory_monitor_summary.json
[2025-11-30 15:27:37] -rw-------. 1 boinc boinc     21149 Nov 30 15:25 log.47523969._000198.job.log.tgz.1
[2025-11-30 15:27:37] -rw-------. 1 boinc boinc      8416 Nov 30 15:27 heartbeat.json
[2025-11-30 15:27:37] -rw-r--r--. 1 boinc boinc      8192 Nov 30 15:27 boinc_mmap_file
[2025-11-30 15:27:37] -rw-r--r--. 1 boinc boinc        22 Nov 30 15:27 wrapper_checkpoint.txt
[2025-11-30 15:27:37] -rw-------. 1 boinc boinc       747 Nov 30 15:27 pilotlog.txt
[2025-11-30 15:27:37] -rw-------. 1 boinc boinc        95 Nov 30 15:27 pilot_heartbeat.json
[2025-11-30 15:27:37] -rw-------. 1 boinc boinc     85662 Nov 30 15:27 log.47523969._000198.job.log.1
[2025-11-30 15:27:37] -rw-------. 1 boinc boinc       188 Nov 30 15:27 output.list
[2025-11-30 15:27:37] -rw-r--r--. 1 boinc boinc       620 Nov 30 15:27 runtime_log
[2025-11-30 15:27:37] -rw-------. 1 boinc boinc    122880 Nov 30 15:27 result.tar.gz
[2025-11-30 15:27:37] -rw-r--r--. 1 boinc boinc      8636 Nov 30 15:27 runtime_log.err
[2025-11-30 15:27:37] -rw-------. 1 boinc boinc       645 Nov 30 15:27 lqLKDmeJkj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEGPKDmzVjZ3n.diag
[2025-11-30 15:27:37] -rw-r--r--. 1 boinc boinc     21798 Nov 30 15:27 stderr.txt
[2025-11-30 15:27:37] No HITS result produced
[2025-11-30 15:27:37]  *** Contents of shared directory: ***
[2025-11-30 15:27:37] total 287060
[2025-11-30 15:27:37] -rw-r--r--. 2 boinc boinc 293214244 Nov 30 15:24 ATLAS.root_0
[2025-11-30 15:27:37] -rw-r--r--. 2 boinc boinc     15847 Nov 30 15:24 start_atlas.sh
[2025-11-30 15:27:37] -rw-r--r--. 2 boinc boinc    589950 Nov 30 15:24 input.tar.gz
[2025-11-30 15:27:37] -rw-------. 1 boinc boinc    122880 Nov 30 15:27 result.tar.gz
15:27:39 (1649395): run_atlas exited; CPU time 17.482209
15:27:39 (1649395): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN